mycology

真菌学
  • 文章类型: Journal Article
    球虫和球虫是引起球虫菌病的密切相关的真菌物种。这些二态生物在免疫活性和免疫功能低下的个体中引起疾病,并且多达40%的人口在流行地区被感染。虽然大多数感染自发消退,感染可以延长,在某些情况下,致命的。球虫已经研究了100多年,并且已经研究了生物体的许多方面及其引起的疾病。在过去的50年中,PubMed引用了超过500份有关球虫的手稿(不包括临床文章),所以有大量的证据需要审查。我们回顾了这些真菌的最准确和最翔实的基础研究,包括一些开创性的旧研究以及对当前研究的广泛回顾。这是将关于这种真菌的最重要的基础研究研究收集到一份出版物中的尝试。为了关注这次审查,我们将专门讨论生物体的真菌学,而不是宿主反应或临床研究的研究。我们希望这篇评论将成为对球虫和球虫菌病感兴趣的人的有用资源。
    Coccidioides immitis and posadasii are closely related fungal species that cause coccidioidomycosis. These dimorphic organisms cause disease in immunocompetent as well as immunocompromised individuals and as much as 40% of the population is infected in the endemic area. Although most infections resolve spontaneously, the infection can be prolonged and, in some instances, fatal. Coccidioides has been studied for more than 100 years and many aspects of the organism and the disease it causes have been investigated. There are over 500 manuscripts concerning Coccidioides (excluding clinical articles) referenced in PubMed over the past 50 years, so there is a large body of evidence to review. We reviewed the most accurate and informative basic research studies of these fungi including some seminal older studies as well as an extensive review of current research. This is an attempt to gather the most important basic research studies about this fungus into one publication. To focus this review, we will discuss the mycology of the organism exclusively rather than the studies of the host response or clinical studies. We hope that this review will be a useful resource to those interested in Coccidioides and coccidioidomycosis.
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  • 文章类型: Journal Article
    植物来源的生物质是地球上最丰富的生物碳源。尽管如此,只有一小部分被称为白腐真菌(WRF)的生物可以有效地分解植物细胞壁的多糖和木质素成分。这种独特的能力赋予WRF在全球碳循环中的关键作用,并突出了它们在各种生物技术应用中的潜在利用。迄今为止,对WRF的研究主要集中在其细胞外消化酶上,而对其细胞内代谢的了解仍未得到充分开发。系统生物学是阐明众多生物体中生物过程的强大方法,包括WRF。因此,在这里,我们回顾了迄今为止应用于WRF的系统生物学方法,突出与细胞内代谢有关的观察,并进行比较细胞外蛋白质组学分析,以建立WRF物种之间的进一步相关性,酶,和栽培条件。最后,我们讨论了WRF的生物技术机遇以及挑战和未来的研究方向。
    Plant-derived biomass is the most abundant biogenic carbon source on Earth. Despite this, only a small clade of organisms known as white-rot fungi (WRF) can efficiently break down both the polysaccharide and lignin components of plant cell walls. This unique ability imparts a key role for WRF in global carbon cycling and highlights their potential utilization in diverse biotechnological applications. To date, research on WRF has primarily focused on their extracellular \'digestive enzymes\' whereas knowledge of their intracellular metabolism remains underexplored. Systems biology is a powerful approach to elucidate biological processes in numerous organisms, including WRF. Thus, here we review systems biology methods applied to WRF to date, highlight observations related to their intracellular metabolism, and conduct comparative extracellular proteomic analyses to establish further correlations between WRF species, enzymes, and cultivation conditions. Lastly, we discuss biotechnological opportunities of WRF as well as challenges and future research directions.
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  • 文章类型: Journal Article
    BACKGROUND: Luliconazole is a broad-spectrum antifungal agent with impactful fungicidal and fungistatic activity. It has shown exceptional potency against miscellaneous fungal strains like Candida, Aspergillus, Malassezia, Fusarium species and various dermatophytes.
    OBJECTIVE: Luliconazole belongs to class Ⅱ of the Biopharmaceutical Classification System with low aqueous solubility. Although it is available conventionally as 1% w/v topical cream, it has limitations of lower skin permeation and shorter skin retention. Therefore, nanoformulations based on various polymers and nanostructure carriers can be employed to overcome the impediments regarding topical delivery and efficacy of luliconazole.
    METHODS: In this review, we have tried to provide insight into the literature gathered from authentic web resources and research articles regarding recent research conducted on the subject of formulation development, patents, and future research requisites of luliconazole.
    RESULTS: Nanoformulations can play a fundamental role in improving topical delivery by escalating dermal localization and skin penetration. Fabricating luliconazole into nanoformulations can overcome the drawbacks and can efficiently enhance its antimycotic activity.
    CONCLUSIONS: It has been concluded that luliconazole has exceptional potential in the treatment of various fungal infections, and therefore, it should be exploited to its maximum for its innovative application in the field of mycology.
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  • 文章类型: Journal Article
    UNASSIGNED: Coccidioidomycosis is an infectious disease that gained clinical significance in the early 20th century. Many of the foundational contributions to coccidioidomycosis research, including the discovery of the fungal disease agent, Coccidioides spp., were made by women. We review recent progress in Coccidioides research and big questions remaining in the field, while highlighting some of the contributions from women.
    UNASSIGNED: New molecular-based techniques provide a promising method for detecting Coccidioides, which can help determine the dominate reservoir host and ideal environmental conditions for growth. Genetic and genomic analyses have allowed an understanding of population structure, species level diversity, and evolutionary histories. We present a current, comprehensive genome list, where women contributed many of these entries. Several efforts to develop a coccidioidomycosis vaccine are underway.
    UNASSIGNED: Women continue to pioneer research on Coccidioides, including the relationships between the fungi and the environment, genetics, and clinical observations. Significant questions remain in the field of Coccidioides, including the main host reservoir, the relationships between genotypic and phenotypic variation, and the underlying cause for chronic clinical coccidioidomycosis cases.
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  • 文章类型: Journal Article
    耳念珠菌是一种新型的主要真菌病原体,在过去十年中引发了几次爆发。治疗真菌疾病的少数药物,这种酵母具有很高的多药耐药率和误导性鉴定的发生,和形成生物膜的能力(自然对药物更有抗性)使得治疗金黄色葡萄球菌感染变得非常困难。本文旨在快速说明C.auris鉴定中的主要问题,可用的治疗方法和相关的耐药机制,以及最近报道的新型和替代治疗和药物(天然和合成)。
    Candida auris is a novel and major fungal pathogen that has triggered several outbreaks in the last decade. The few drugs available to treat fungal diseases, the fact that this yeast has a high rate of multidrug resistance and the occurrence of misleading identifications, and the ability of forming biofilms (naturally more resistant to drugs) has made treatments of C. auris infections highly difficult. This review intends to quickly illustrate the main issues in C. auris identification, available treatments and the associated mechanisms of resistance, and the novel and alternative treatment and drugs (natural and synthetic) that have been recently reported.
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  • 文章类型: Journal Article
    高粱(Sorghumbicolor)是世界第五大栽培谷类作物,传统上提供食物,饲料,和饲料,但最近还用于生产可再生燃料和化学品的可发酵糖。半营养真菌病原体炭疽病,高粱炭疽病的病原体,在温暖潮湿的气候中普遍存在,其中许多高粱被种植,并对高粱的生产构成严重威胁。使用抗炭疽病的高粱种质是保护高粱免受这种病原体侵害的最环保和经济可持续的方式。尽管近年来已在不同的高粱种质中定位了多个抗炭疽病基因座,在本地和区域水平上,C.sublineola致病型的多样性意味着这些抗性基因在不同的栽培区域并不同样有效。这篇综述总结了高粱防御反应的遗传和细胞学数据,并描述了最近的进展,这些进展将有助于在分子水平上更好地了解高粱和亚系梭菌之间的相互作用。这包括高粱基因组和C.sublineola基因组草图的发布,使用下一代测序技术来识别响应感染而激活的基因表达网络,以及验证抗性基因的方法的改进,特别是病毒诱导和转基因基因沉默方法。
    Sorghum (Sorghum bicolor) is the fifth most cultivated cereal crop in the world, traditionally providing food, feed, and fodder, but more recently also fermentable sugars for the production of renewable fuels and chemicals. The hemibiotrophic fungal pathogen Colletotrichum sublineola, the causal agent of anthracnose disease in sorghum, is prevalent in the warm and humid climates where much of the sorghum is cultivated and poses a serious threat to sorghum production. The use of anthracnose-resistant sorghum germplasm is the most environmentally and economically sustainable way to protect sorghum against this pathogen. Even though multiple anthracnose resistance loci have been mapped in diverse sorghum germplasm in recent years, the diversity in C. sublineola pathotypes at the local and regional levels means that these resistance genes are not equally effective in different areas of cultivation. This review summarizes the genetic and cytological data underlying sorghum\'s defense response and describes recent developments that will enable a better understanding of the interactions between sorghum and C. sublineola at the molecular level. This includes releases of the sorghum genome and the draft genome of C. sublineola, the use of next-generation sequencing technologies to identify gene expression networks activated in response to infection, and improvements in methodologies to validate resistance genes, notably virus-induced and transgenic gene silencing approaches.
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  • 文章类型: Journal Article
    Candidaemia is associated with high mortality. In the last few years, several guidelines have been published on the management of Candida bloodstream infection. However, adherence to the practice guidelines has been suboptimal. In order to facilitate and objectively measure the adherence to good practice recommendations, a scoring criterion was published by the European Confederation of Medical Mycology (ECMM). The ECMM Quality (EQUAL) of Clinical Candidaemia Management is an audit tool that comprises of 10 quality indicators. Each quality indicator is allotted between 1 and 3 points. The maximum achievable score is 22 or 19 in patients with or without a central venous catheter, respectively. This paper reviews each of the 10 quality indicators and provides the context for improving quality within the individual domains. The review also suggests areas that are in need of further clarity or areas which merit attention in the future updates of the EQUAL scoring system so that clinicians are able to derive maximum benefit from the audit tool. The EQUAL scoring tool is an important milestone in the quality improvement aspect of the management of candidaemia and contributes to the various components of clinical governance in the management of Candida infection of the bloodstream.
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  • 文章类型: Journal Article
    Laser therapy for onychomycosis is emerging but its efficacy remains unestablished. To examine current evidence on efficacy of laser treatment of onychomycosis. A systematic review and one-arm meta-analysis, including all prospective clinical trials, identified on PubMed, Cochrane Library, and EMBASE databases. Trials with participants as unit of analysis (UOA), n = 13, were analyzed separately from trials with nails as UOA, n = 7. Summary proportions and 95% confidence intervals (95% CI) were calculated. Outcomes were mycological cure, clinical improvement, or complete cure. Twenty-two prospective trials (four randomized controlled trials and 18 uncontrolled trials) with a total of 755 participants were analyzed. Summary proportions with 95% CI for participants as UOA were mycological cure 70.4%, 95% CI 52.2-83.8%; clinical improvement 67.2%, 95% CI 43.2-84.7%; and complete cure 7.2%, 95% CI 1.9-23.5%. High statistical heterogeneity was detected (mycological cure I2 = 88%, P < 0.01; clinical improvement I2 = 69%, P < 0.01; complete cure I2 = 60%, P = 0.11). The current level of evidence is limited and with high heterogeneity, making it difficult to assess the true efficacy of laser treatment for onychomycosis. Larger randomized controlled trials with well-defined methodology are warranted.
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  • 文章类型: Journal Article
    曲霉属。是新兴的非皮肤癣菌霉菌甲癣(NDMO)的病原体。新曲霉属。最近被描述为导致指甲感染。诊断由曲霉属引起的甲癣需要以下标准。:(1)直接显微镜阳性和(2)曲霉属的重复培养或分子检测。,前提是没有分离出皮肤癣菌。对42项流行病学研究的回顾表明,由曲霉属引起的甲癣。在普通人群中,所有甲癣病例的<1%至35%之间变化,在占71%的糖尿病人群和老年人中更高;在儿童和青少年中非常罕见。曲霉属。占NDMO比例的7.7-100%。涉及脚趾甲的频率是手指甲的25倍。A.黄花,A.terreus和A.niger是最常见的病原物种;描述的其他稀有和新兴物种包括A.tubingensis,A.sydowii,A.alliaceus,A.坎迪斯,A.杂色,A.Unguis,A.Persii,A.硬核,A.uvarum,A.Melleus,A.tamarii和A.nomius。曲霉菌引起的甲癣的临床表现。是非特异性的,但通常是甲真菌病的远端外侧模式。具有阳性KOH的阴性培养物可以指向包括曲霉属物种的NDM。,作为甲癣的病原体。治疗包括特比萘芬或伊曲康唑的全身治疗。
    Aspergillus spp. are emerging causative agents of non-dermatophyte mould onychomycosis (NDMO). New Aspergillus spp. have recently been described to cause nail infections. The following criteria are required to diagnose onychomycosis due to Aspergillus spp.: (1) positive direct microscopy and (2) repeated culture or molecular detection of Aspergillus spp., provided no dermatophyte was isolated. A review of 42 epidemiological studies showed that onychomycosis due to Aspergillus spp. varies between < 1 and 35% of all cases of onychomycosis in the general population and higher among diabetic populations accounting for up to 71% and the elderly; it is very uncommon among children and adolescence. Aspergillus spp. constitutes 7.7-100% of the proportion of NDMO. The toenails are involved 25 times more frequently than fingernails. A. flavus, A. terreus and A. niger are the most common aetiologic species; other rare and emerging species described include A. tubingensis, A. sydowii, A. alliaceus, A. candidus, A. versicolor, A. unguis, A. persii, A. sclerotiorum, A. uvarum, A. melleus, A. tamarii and A. nomius. The clinical presentation of onychomycosis due to Aspergillus spp. is non-specific but commonly distal-lateral pattern of onychomycosis. A negative culture with a positive KOH may point to a NDM including Aspergillus spp., as the causative agent of onychomycosis. Treatment consists of systemic therapy with terbinafine or itraconazole.
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  • 文章类型: Journal Article
    The role of bacteria in causing apical periodontitis has been widely established, whilst the role of other microorganisms is studied less thoroughly. This systematic review and meta-analysis reviewed the literature for the prevalence and diversity of fungi in root canal infections. An extensive literature search was carried out in the Cochrane databases, EMBASE, MEDLINE, LILACS, SciELO and Web of Science. Additional studies were identified from six endodontic journals, four main endodontic textbooks and references of relevant papers. Selected clinical studies included sampling of necrotic pulps in permanent teeth and microbial analysis of these samples. Studies were critically appraised using the Joanna Briggs Institute Prevalence Critical Appraisal Checklist. Meta-analysis was performed using MetaXL. The screening of 1041 titles and abstracts and full-text reading yielded 54 studies. The overall prevalence of fungi in root canal infections was 7.5% (CI 95%: 3.6-11.8%) in the inverse variance fixed effect heterogeneity model. Candida albicans was the most frequently isolated species. Significant heterogeneity was observed (P < 0.001, I2  = 85.04%). Subgroup analyses based on geographical location, period of publication, type of infection, state of general health, communication with the oral cavity, type of sample and identification method revealed no factor influencing the prevalence. Better standardized techniques and a comprehensive analysis will reveal a more detailed and accurate representation of the prevalence and nature of fungi in root canal infections.
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