causal association

因果关联
  • 文章类型: Journal Article
    背景:虽然越来越多的证据表明偏头痛和心血管疾病之间存在关系,偏头痛和心血管疾病之间因果关系的遗传证据仍然很少。研究偏头痛与心血管疾病之间的因果关系至关重要。
    方法:我们使用公开的全基因组关联研究(GWAS)汇总数据集和严格筛选工具变量,进行了双向孟德尔随机化(MR)研究,包括发现样本和复制样本。四种不同的MR技术-逆方差加权(IVW),埃格先生,加权中位数,和加权模式-以及各种灵敏度分析-Cochran的Q,IVW径向,leave-one-out(LOO),和MR-PRESSO-用于研究心血管疾病和偏头痛之间的因果关系。
    结果:遗传预测的偏头痛对冠状动脉疾病的保护性因果效应(OR,0.881;95%CI0.790-0.982;p=0.023)和缺血性卒中(OR,0.912;95%CI0.854-0.974;p=0.006)在正向MR分析中检测到,但在任何其他心血管疾病中均未检测到。始终如一,我们还发现了冠状动脉粥样硬化的保护性因果效应(OR,0.865;95%CI0.797-0.940;p=0.001)和心肌梗死(OR,0.798;95%CI0.668-0.952;p=0.012)在反向MR分析中对偏头痛的影响。
    结论:我们发现偏头痛对冠心病和缺血性卒中具有潜在的保护作用,冠状动脉粥样硬化和心肌梗死对偏头痛具有潜在的保护作用。我们强调了流行病学和遗传差异,以及对偏头痛药物的长期安全性监测和未来研究以改善偏头痛患者的心血管结局的必要性。
    BACKGROUND: While growing evidence suggests a relationship between migraine and cardiovascular disease, the genetic evidence for a causal relationship between migraine and cardiovascular disease is still scarce. Investigating the causal association between migraine and cardiovascular disease is vital.
    METHODS: We carried out a bidirectional Mendelian randomization (MR) study including discovery samples and replication samples using publicly available genome-wide association study (GWAS) summary datasets and stringent screening instrumental variables. Four different MR techniques-Inverse variance weighted (IVW), MR ‒Egger, weighted median, and weighted mode-as well as various sensitivity analyses-Cochran\'s Q, IVW radial, leave-one-out (LOO), and MR-PRESSO-were utilized to investigate the causal relationship between cardiovascular disease and migraine.
    RESULTS: The protective causal effects of genetically predicted migraine on coronary artery disease (OR, 0.881; 95% CI 0.790-0.982; p = 0.023) and ischemic stroke (OR, 0.912; 95% CI 0.854-0.974; p = 0.006) were detected in forward MR analysis but not in any other cardiovascular disease. Consistently, we also discovered protective causal effects of coronary atherosclerosis (OR, 0.865; 95% CI 0.797-0.940; p = 0.001) and myocardial infarction (OR, 0.798; 95% CI 0.668-0.952; p = 0.012) on migraine in reverse MR analysis.
    CONCLUSIONS: We found a potential protective effect of migraine on coronary artery disease and ischemic stroke and a potential protective effect of coronary atherosclerosis and myocardial infarction on migraine. We emphasised epidemiological and genetic differences and the need for long-term safety monitoring of migraine medications and future research to improve cardiovascular outcomes in migraine patients.
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  • 文章类型: Journal Article
    骨关节炎(OA)是一种常见的退行性疾病,影响全球数百万人。
    目的:目前尚无关于OA、抑郁症,和全身脂肪量。在这项研究中,我们进行了两步孟德尔随机化分析,以确定两者之间的因果关系.
    方法:已发表的汇总水平数据来自全基因组关联研究(GWAS)。我们的研究包括357,957个样本和10,828,862个SNP。最后,OA的结果GWAS数据来自使用UKBiobank数据的OA遗传结构的GWAS.这项研究包括50,508个样本和15,845,511个SNP。我们使用了五种不同的分析模式,包括逆方差加权荟萃分析(IVW),MR-Egger回归,加权中位数,简单模式,和加权模式,探索因果关系。
    结果:我们发现抑郁症与体脂质量呈正相关,抑郁症导致体脂质量增加(IVW结果:p=3.39E-07,OR(95%CI)=2.16(1.61,2.90))。我们还发现身体脂肪量与OA之间存在正相关,随着体脂质量增加OA的风险(IVW结果:p=1.65E-33,OR(95%CI)=1.98(1.77,2.21)。体脂肪量在抑郁症与OA的因果关系中起着重要的中介作用,抑郁症引起的OA风险中约有14%是由体内脂肪量介导的。
    结论:我们的研究提供了可靠的证据,表明抑郁症对OA的风险有不利影响。未来的研究可以支持这些关联改善抑郁效应,包括社会,生物,和行为因素,降低患骨关节炎等慢性疾病的风险。发现与OA和抑郁症相关的高风险变异等位基因可用于预测疾病的发生,为临床干预和治疗OA提供依据。
    Osteoarthritis (OA) is a common degenerative disease that affects millions of individuals worldwide.
    OBJECTIVE: There is no conclusive epidemiological evidence regarding the relationship between OA, depression, and whole-body fat mass. In this study, we conducted a two-step Mendelian randomization analysis to determine the causal relationships between them.
    METHODS: The published summary-level data are from genome-wide association studies (GWAS). Our study included 357,957 samples and 10,828,862 SNPs. Finally, the outcome GWAS data for OA came from a GWAS on the genetic architecture of OA using UK Biobank data. This study included 50,508 samples and 15,845,511 SNPs. We used five different modes of analysis, including inverse variance weighted meta-analysis (IVW), MR-Egger regression, weighted median, simple mode, and weighted mode, to explore causal relationships.
    RESULTS: We found a positive correlation between depression and body fat mass, with depression leading to body fat mass an increase in (IVW result: p = 3.39E-07, OR (95 % CI) =2.16 (1.61, 2.90)). We also found a positive correlation between body fat mass and OA, with body fat mass increasing the risk of OA (IVW result: p = 1.65E-33, OR (95 % CI) = 1.98 (1.77, 2.21). Body fat mass played an important role as a mediator in the causal relationship between depression and OA, with approximately 14 % of the risk of OA caused by depression being mediated by body fat mass.
    CONCLUSIONS: Our study offers reliable evidence that depression has a detrimental impact on the risk of OA. Future research can support these associations from improving depressed effect, including social, biological, and behavioral factors, to reduce the risk of chronic diseases such as osteoarthritis. And we identified high-risk variation of alleles which associated with OA and depression can be used to predict disease and provide a basis for clinical intervention and treatment of OA.
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  • 文章类型: Journal Article
    现在有越来越多的证据表明2型糖尿病(T2DM)与阿尔茨海默病(AD)有关。然而,目前尚不清楚两者是否有因果关系。
    为了揭示T2DM和AD之间的因果关系,我们进行了双向孟德尔随机化(MR)分析.
    系统地筛选了遗传工具变量,和逆方差加权,MR-Egger回归,加权中位数,简单模式,和加权模式用于评估两种疾病之间的致病关联,和敏感性分析用于进一步验证结果的稳健性。
    以T2DM为暴露量的正向MR分析结果为[OR=0.998,95%CI(0.975~1.021),p=0.857],以AD为暴露量的反向MR分析结果为[OR=0.966,95%CI(0.934~0.999),p=0.043]。结果显示在基因水平上T2DM和AD之间没有显著关联(p<0.025)。敏感性分析与主要分析结果一致,证实了研究的稳健性。
    T2DM和AD可能没有遗传因果关系。
    UNASSIGNED: There is now increasing evidence that type 2 diabetes mellitus (T2DM) is associated with Alzheimer\'s disease (AD). However, it is unclear whether the two are causally related.
    UNASSIGNED: To reveal the causal association between T2DM and AD, we performed a bidirectional Mendelian randomization (MR) analysis.
    UNASSIGNED: Genetic instrumental variables were systematically screened, and inverse-variance weighting, MR-Egger regression, weighted median, simple mode, and weighted mode were applied to assess the pathogenic associations between the two diseases, and sensitivity analyses were used to further validate the robustness of the results.
    UNASSIGNED: The results of forward MR analysis with T2DM as the exposure were [OR = 0.998, 95% CI (0.975∼1.021), p = 0.857], and the results of reverse MR analysis with AD as the exposure were [OR = 0.966, 95% CI (0.934∼0.999), p = 0.043]. The results showed no significant association between T2DM and AD at the gene level (p < 0.025). Sensitivity analyses were consistent with the results of the main analysis, confirming the robustness of the study.
    UNASSIGNED: T2DM and AD may not be genetically causally associated.
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  • 文章类型: Journal Article
    观察性研究报告了体重指数(BMI)以及身高与气胸风险之间的关联。然而,长期以来,尚不清楚BMI或身高是否与气胸有因果关系.
    BMI的遗传汇总数据,身高和气胸来自多项独立的大基因组关联研究(GWAS).进行一系列质量控制步骤以选择仪器。进行了四个独立的双样本孟德尔随机化(MR)分析,以充分评估BMI或身高与气胸之间的因果关系。并通过一系列敏感性分析评估结果的稳健性。
    身高增加气胸的风险,OR为1.5181(95CI1.3092-1.7604;p=3.28e-08);没有证据表明BMI对气胸的风险有因果关系,OR为0.8979(95CI0.7417-1.0869;p=0.269)。身高增加自发性气胸的风险,OR为1.0010(95CI1.0002-1.0018;p=0.012);结果显示BMI与自发性气胸之间没有显著的因果关系,OR为0.9992(95CI0.9983-1.0002;p=0.112)。
    我们的结果支持身高与气胸之间的遗传关联。我们发现身高会增加气胸的风险。然而,没有证据表明BMI与气胸风险之间存在因果关系.BMI与气胸之间的关系需要进一步深入分析。
    UNASSIGNED: Observational studies have reported an association between body mass index (BMI) as well as height and the risk of pneumothorax. However, it has long been unclear whether BMI or height are causally associated with pneumothorax.
    UNASSIGNED: Genetic summary data for BMI, height and pneumothorax were retrieved from multiple independent large genome-wide association studies (GWAS). A series of quality control steps were conducted to select instruments. Four independent two-sample Mendelian randomization (MR) analyzes were performed to adequately assess the causal relationship between BMI or height on pneumothorax, and the robustness of the results was assessed by a series of sensitivity analyzes.
    UNASSIGNED: Height increased the risk of pneumothorax with an OR of 1.5181 (95%CI 1.3092-1.7604; p = 3.28e-08); there was no evidence of a causal effect of BMI on the risk of pneumothorax with an OR of 0.8979 (95%CI 0.7417-1.0869; p = 0.269). Height increased the risk of spontaneous pneumothorax with an OR of 1.0010 (95%CI 1.0002-1.0018; p = 0.012); the results showed no significant causal relationship between BMI and spontaneous pneumothorax either with an OR of 0.9992 (95%CI 0.9983-1.0002; p = 0.112).
    UNASSIGNED: Our results supported a genetic association between height and pneumothorax. We found that height increased the risk of pneumothorax. However, no evidence was found to suggest a causal relationship between BMI and pneumothorax risk. The relationship between BMI and pneumothorax requires further in-depth analysis.
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  • 文章类型: Journal Article
    背景:这项研究的目的是基于双样本双向孟德尔随机化研究,探索免疫细胞与VaD之间的因果关系。
    方法:基于来自公开的全基因组关联研究的合并数据集,使用逆方差加权(IVW)进行双向双样本MR分析,加权中位数(WE),和MR-Egger回归评估免疫细胞与血管性痴呆之间的因果关系。使用Cochran的Q统计量评估异质性。利用MR-PRESSO方法进行异常检测,验证了MR分析结果的可靠性,用于水平多变量分析的MR-Egger方法,以及用于敏感性分析的留一法。
    结果:具体来说,27种免疫表型与VaD发病机制相关,包括Swmem%淋巴细胞(P=0.043),CD20上的CD38-(P=0.039),CD11c+单核细胞AC(P=0.024),DCAC(P=0.002),CD62L+髓样DC的CCR2(P=0.039),静息Treg%CD4(P=0.042),激活和静息Treg%CD4+(P=0.038),CD28+CD45RA-CD8br%CD8br(P=0.047),NK%CD3-淋巴细胞(P=0.042),B细胞上的CD45(P=0.029),NKT上的FSC-A(P=0.033),CD33brHLADR+CD14-上的CD45与VaD风险增加显著相关(P=0.039)。此外,四种免疫表型,即,CD20上的CD19-,静息Treg%CD4,激活和静息Treg%CD4+,CD11c+单核细胞AC,对VaD有双向影响。
    结论:MR分析揭示了某些免疫细胞与VaD之间的潜在因果关系。我们通过免疫细胞浸润分析的初步探索强调了免疫细胞在VaD中的重要价值。因此,本研究可能为VaD的防治提供新的视角。
    BACKGROUND: The aim of this study was to explore the causal association between immune cells and VaD based on a two-sample bidirectional Mendelian randomization study.
    METHODS: Bidirectional two-sample MR analyses based on pooled datasets from publicly available genome-wide association studies were performed using inverse variance weighted (IVW), weighted median (WE), and MR-Egger regressions to evaluate the causal relationships between immune cells and vascular dementia. Heterogeneity was assessed using Cochran\'s Q statistic. The reliability of the MR analysis results was verified by using the MR-PRESSO method for outlier detection, the MR-Egger method for horizontal multivariate analysis, and the leave-one-out method for sensitivity analysis.
    RESULTS: Specifically, 27 immunophenotypes were associated with VaD pathogenesis, including Sw mem %lymphocyte (P = 0.043), CD38 on CD20- (P = 0.039), CD11c+ monocyte AC (P = 0.024), DC AC (P = 0.002), CCR2 on CD62L+ myeloid DC (P = 0.039), Resting Treg %CD4 (P = 0.042), Activated & resting Treg %CD4+ (P = 0.038), CD28+ CD45RA- CD8br %CD8br (P = 0.047), NK %CD3- lymphocyte (P = 0.042), CD45 on B cell (P = 0.029), FSC-A on NKT (P = 0.033), CD45 on CD33br HLA DR+ CD14- (P = 0.039) were significantly correlated with increased VaD risk. Additionally, four immune phenotypes, namely, CD19 on CD20-, Resting Treg %CD4, Activated & resting Treg %CD4+, and CD11c+ monocyte AC, showed bidirectional effects on VaD.
    CONCLUSIONS: MR analysis revealed potential causal relationships between certain immune cells and VaD. Our preliminary exploration through immune cell infiltration analysis highlights the significant value of immune cells in VaD. Therefore, this study may provide a new perspective for the prevention and treatment of VaD.
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  • 文章类型: Journal Article
    观察性研究表明,低血压是谵妄的潜在危险因素。然而,以前的观察文章在确定低血压和谵妄之间因果关系方面的能力有限.本研究旨在使用双样本孟德尔随机化(MR)探索这两种情况之间的遗传因果关系。
    低血压和谵妄的全基因组关联研究(GWAS)汇总数据来自FinnGen联盟。研究人员利用了几种统计方法,例如逆方差加权(IVW),加权中位数,Egger先生,加权模式,进行MR统计分析的简单模式。为了识别MR结果之间的异质性,我们采用了Cochrane的Q检验。此外,我们使用MR-Egger截距检验和MR多效性残差和异常值(MR-PRESSO)检验水平多效性。
    研究结果表明,使用IVW方法,低血压被确定为谵妄的独立风险变量(p=0.010,比值比[OR][95%置信区间(CI)]=1.302[1.066-1.592])。发现水平多效性的存在对建立因果关系的影响最小(p=0.999),并且没有证据表明遗传变异之间的异质性(p=0.379)。此外,留一法证明了这种关联的稳定性和稳健性。
    我们进行了双样本MR分析,发现低血压和谵妄之间存在遗传因果关系的证据。我们的研究结果表明,具有低血压遗传倾向的个体发生谵妄的风险更高。这表明旨在改善围手术期低血压的干预措施可以帮助限制谵妄的发生率。
    UNASSIGNED: Observational research suggests that hypotension is a potential hazard factor of delirium. Nevertheless, previous observational articles are limited in their ability to establish causality between hypotension and delirium. The present study was sought to explore the genetic causal relationship between these two conditions using two-sample Mendelian randomization (MR).
    UNASSIGNED: Genome-wide association study (GWAS) summarized data for hypotension and delirium were obtained from the FinnGen Consortium. The researchers utilized several statistical methods, such as inverse-variance weighted (IVW), weighted median, MR Egger, weighted mode, and simple mode in conducting the MR statistical analysis. In order to identify heterogeneity among the MR outcomes, we employed the Cochrane\'s Q test. Furthermore, we used the MR-Egger intercept test and MR pleiotropy residual sum and outliers (MR-PRESSO) test to examine horizontal pleiotropy.
    UNASSIGNED: The findings revealed that hypotension was identified as an independent hazard variable for delirium (p = 0.010, odds ratio [OR] [95% confidence interval (CI)] = 1.302 [1.066-1.592]) using the IVW method. The presence of horizontal pleiotropy was found to have minimal impact on establishing causal relationship (p = 0.999), and there was no evidence to suggest heterogeneity between genetic variations (p = 0.379). Additionally, the leave-one-out method demonstrated the stability and robustness of this association.
    UNASSIGNED: We performed two-sample MR analyses and found evidence of a genetic causal relationship between hypotension and delirium. Our findings suggest that individuals with a genetic predisposition for hypotension may have a higher risk of developing delirium. This suggests that interventions aimed at improving perioperative hypotension could aid in limiting the incidence of delirium.
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  • 文章类型: Journal Article
    脑动脉瘤是一种预后不良的高危脑血管疾病,可能与多种因素有关。本研究旨在使用孟德尔随机化(MR)方法探索线粒体相关蛋白与脑动脉瘤风险之间的关联。
    我们使用IEUOpenGWAS项目中的线粒体相关蛋白和芬兰脑动脉瘤数据库中的GWAS汇总统计数据(uIA,aSAH)。使用MR-Egger评估线粒体相关暴露与脑动脉瘤之间的关联,加权模式,IVW,简单模式和加权中位数法。反向MR评估反向因果关系,而敏感性分析检查了工具变量的异质性和多效性。使用FDR校正证实了与脑动脉瘤的显着因果关系。
    通过MR分析,我们确定了与aSAH风险增加相关的六种线粒体蛋白:AIF1(OR:1.394,95%CI:1.109-1.752,p=0.0044),CCDC90B(OR:1.318,95%CI:1.132-1.535,p=0.0004),TIM14(OR:1.272,95%CI:1.041-1.553,p=0.0186),NAGS(OR:1.219,95%CI:1.008-1.475,p=0.041),tRNAPusA(OR:1.311,95%CI:1.096-1.569,p=0.003),和MRM3(OR:1.097,95%CI:1.016-1.185,p=0.0175)。其中,CCDC90B,tRNAPusA,AIF1与aSAH风险增加存在显著的因果关系(FDRq<0.1)。三种线粒体蛋白与UIA的风险增加相关:CCDC90B(OR:1.309,95%CI:1.05-1.632,p=0.0165),tRNAPusA(OR:1.306,95%CI:1.007-1.694,p=0.0438),和MRM3(OR:1.13,95%CI:1.012-1.263,p=0.0303)。在反向MR研究中,只有一种线粒体蛋白,TIM14(OR:1.087,95%CI:1.004-1.177,p=0.04),与aSAH有因果关系。敏感性分析未显示异质性或多效性。结果表明,CCDC90B,tRNAPusA,MRM3可能是脑动脉瘤(破裂和未破裂)的常见危险因素,虽然AIF1和NAGS与aSAH的风险增加特别相关,与UIA无关。TIM14可能与aSAH相互作用。
    我们的发现证实了线粒体相关蛋白与脑动脉瘤之间的因果关系,为未来研究这种疾病的发病机制和治疗提供新的见解。
    UNASSIGNED: Cerebral aneurysm is a high-risk cerebrovascular disease with a poor prognosis, potentially linked to multiple factors. This study aims to explore the association between mitochondrial-associated proteins and the risk of cerebral aneurysms using Mendelian randomization (MR) methods.
    UNASSIGNED: We used GWAS summary statistics from the IEU Open GWAS project for mitochondrial-associated proteins and from the Finnish database for cerebral aneurysms (uIA, aSAH). The association between mitochondrial-associated exposures and cerebral aneurysms was evaluated using MR-Egger, weighted mode, IVW, simple mode and weighted median methods. Reverse MR assessed reverse causal relationship, while sensitivity analyses examined heterogeneity and pleiotropy in the instrumental variables. Significant causal relationship with cerebral aneurysms were confirmed using FDR correction.
    UNASSIGNED: Through MR analysis, we identified six mitochondrial proteins associated with an increased risk of aSAH: AIF1 (OR: 1.394, 95% CI: 1.109-1.752, p = 0.0044), CCDC90B (OR: 1.318, 95% CI: 1.132-1.535, p = 0.0004), TIM14 (OR: 1.272, 95% CI: 1.041-1.553, p = 0.0186), NAGS (OR: 1.219, 95% CI: 1.008-1.475, p = 0.041), tRNA PusA (OR: 1.311, 95% CI: 1.096-1.569, p = 0.003), and MRM3 (OR: 1.097, 95% CI: 1.016-1.185, p = 0.0175). Among these, CCDC90B, tRNA PusA, and AIF1 demonstrated a significant causal relationship with an increased risk of aSAH (FDR q < 0.1). Three mitochondrial proteins were associated with an increased risk of uIA: CCDC90B (OR: 1.309, 95% CI: 1.05-1.632, p = 0.0165), tRNA PusA (OR: 1.306, 95% CI: 1.007-1.694, p = 0.0438), and MRM3 (OR: 1.13, 95% CI: 1.012-1.263, p = 0.0303). In the reverse MR study, only one mitochondrial protein, TIM14 (OR: 1.087, 95% CI: 1.004-1.177, p = 0.04), showed a causal relationship with aSAH. Sensitivity analysis did not reveal heterogeneity or pleiotropy. The results suggest that CCDC90B, tRNA PusA, and MRM3 may be common risk factors for cerebral aneurysms (ruptured and unruptured), while AIF1 and NAGS are specifically associated with an increased risk of aSAH, unrelated to uIA. TIM14 may interact with aSAH.
    UNASSIGNED: Our findings confirm a causal relationship between mitochondrial-associated proteins and cerebral aneurysms, offering new insights for future research into the pathogenesis and treatment of this condition.
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  • 文章类型: Journal Article
    背景:证据表明2019年冠状病毒病(COVID-19)与心血管疾病(CVDs)的风险相关。然而,结果不一致,因果关系还有待确定。我们旨在通过双样本孟德尔随机化(MR)分析来研究COVID-19与CVD之间的潜在因果关系。
    方法:COVID-19和包括心肌炎在内的CVD的汇总数据,心力衰竭(HF),急性心肌梗死(AMI),心律失常和静脉血栓栓塞(VTE)来自IEUOpenGWAS项目,一项公开的全基因组关联研究(GWAS)。单核苷酸多态性(SNP)用作工具变量。进行了五种互补的MR方法,包括逆方差加权(IVW),MR-Egger,加权中位数,加权模式和简单模式方法。IVW方法被认为是主要方法。此外,敏感性分析,包括Cochran的Q测试,MR-Egger截距测试,和遗漏分析,进行了评估结果的稳健性。
    结果:根据IVW结果,我们的MR研究表明,遗传预测的COVID-19与CVDs的风险无因果关系[心肌炎:比值比(OR)=1.407,95%置信区间(CI)=0.761-2.602,p值=0.277;HF:OR=1.180,95%CI=0.980-1.420,p值=0.080;AMI:OR=1.002%0.994%OR=1.00132,pCI=0.9补充MR方法显示相似的结果。敏感性分析表明,因果估计是稳健的。
    结论:这项双样本MR分析没有提供足够的证据证明COVID-19与急性CVD风险之间存在因果关系,这可能为预防COVID-19患者急性CVD提供新的见解。
    BACKGROUND: Evidence suggests that coronavirus disease 2019 (COVID-19) is associated with the risk of cardiovascular diseases (CVDs). However, the results are inconsistent, and the causality remains to be established. We aimed to investigate the potential causal relationship between COVID-19 and CVDs by using two-sample Mendelian randomization (MR) analysis.
    METHODS: Summary-level data for COVID-19 and CVDs including myocarditis, heart failure (HF), acute myocardial infarction (AMI), arrhythmia and venous thromboembolism (VTE) were obtained from the IEU OpenGWAS project, a public genome-wide association study (GWAS). Single nucleotide polymorphisms (SNPs) were used as instrumental variables. Five complementary MR methods were performed, including inverse variance weighted (IVW), MR-Egger, weighted median, weighted mode and simple mode methods. IVW method was considered as the primary approach. Besides, sensitivity analyses, including Cochran\'s Q test, MR-Egger intercept test, and leave-one-out analysis, were performed to evaluate the robustness of the results.
    RESULTS: According to the IVW results, our MR study indicated that genetically predicted COVID-19 was not causally connected with the risk of CVDs [myocarditis: odds ratio (OR) = 1.407, 95% confidence interval (CI) = 0.761-2.602, p-value = 0.277; HF: OR = 1.180, 95% CI = 0.980-1.420, p-value = 0.080; AMI: OR = 1.002, 95% CI = 0.998-1.005, p-value = 0.241; arrhythmia: OR = 0.865, 95% CI = 0.717-1.044, p-value = 0.132; VTE: OR = 1.013, 95% CI = 0.997-1.028, p-value = 0.115]. The supplementary MR methods showed similar results. Sensitivity analyses suggested that the causal estimates were robust.
    CONCLUSIONS: This two-sample MR analysis did not provide sufficient evidence for a causal relationship between COVID-19 and the risk of acute CVDs, which may provide new insights into the prevention of acute CVDs in COVID-19 patients.
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  • 文章类型: Journal Article
    先前的研究表明,维生素E可能有助于缓解特应性皮炎,但由于样本量和下落不明的混杂因素等限制,阻碍了对因果关系的确认.本研究旨在通过孟德尔随机化(MR)分析来阐明这一点。GWAS汇总统计数据来自公共数据库,包括一项关于维生素E的研究和两项与特应性皮炎相关的研究。使用宽松(p<1e-5)和严格(p<5e-6)阈值选择两组工具变量(IV)进行单独的MR分析。使用逆方差加权(IVW)作为主要的MR方法,辅以六种额外的MR方法,随后进行荟萃分析,以巩固维生素E对来自两项独立研究的特应性皮炎的影响。此外,我们进行了各种敏感性测试,以评估MR结果的可靠性.在宽松的IV选择阈值下,对来自两个不同特应性皮炎队列的IVW分析的荟萃分析表明,维生素E表现出显着降低特应性皮炎作用的风险(OR=0.817,95%CI:0.673-0.991,p=.041),在严格的IV选择阈值下验证(OR=0.822,95%CI:0.709-0.954,p=.010)。此外,其他六种MR方法与IVW保持平行(OR>1)。多重敏感性测试表明,MR分析不受异质性和水平多效性的影响。总的来说,这项MR研究支持维生素E降低特应性皮炎的风险.因此,维持维生素E的充足摄入可能是预防特应性皮炎的有效措施.
    Prior studies suggested that vitamin E might be beneficial in alleviating atopic dermatitis, but confirming a causal link was hindered by limitations such as sample sizes and unaccounted confounders. The present study aimed to clarify this through Mendelian randomization (MR) analysis. GWAS summary statistics was obtained from public databases encompassing a study on vitamin E and two studies related to atopic dermatitis. Two sets of instrumental variables (IVs) were selected using lenient (p < 1e-5) and strict (p < 5e-6) thresholds for separate MR analyses. Inverse variance weighted (IVW) was used as the primary MR method, supplemented by six additional MR methods, and followed by a meta-analysis to consolidate the impact of vitamin E on atopic dermatitis from two independent studies. Furthermore, various sensitivity tests were performed to assess the reliability of the MR results. A meta-analysis of IVW analyses deriving from two different atopic dermatitis cohorts under lenient IV selection thresholds demonstrated that vitamin E exhibited a significant lowering risk of atopic dermatitis effect (OR = 0.817, 95% CI: 0.673-0.991, p = .041), which was validated under strict IV selection thresholds (OR = 0.822, 95% CI: 0.709-0.954, p = .010). In addition, six other MR methods remained parallel to IVW (OR > 1). Multiple sensitivity tests showed that MR analyses were not affected by heterogeneity and horizontal pleiotropy. Overall, this MR study supported vitamin E reducing the risk of atopic dermatitis. Consequently, maintaining an adequate intake of vitamin E could potentially serve as an effective preventive measure against atopic dermatitis.
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  • 文章类型: Journal Article
    葡萄膜炎,以虹膜发炎为特征,睫状体,和脉络膜,提出了重大的全球临床挑战,对视力障碍有很大贡献。风险因素包括自身免疫性疾病和免疫细胞功能障碍,但仍有许多人身份不明。免疫细胞,特别是T细胞,B细胞,和单核细胞,在葡萄膜炎的发病机制中起关键作用。虽然生物制剂显示出希望,缺乏对眼部疾病中免疫细胞类型的全面研究。全基因组关联研究(GWAS)和孟德尔随机化(MR)为阐明遗传易感性和免疫细胞性状与葡萄膜炎风险之间的因果关系提供了有希望的途径。
    双样本MR分析用于评估731免疫细胞与葡萄膜炎之间的因果关系,对731个免疫细胞性状的遗传变异进行了全基因组显著性分析(P<5×10-8)。免疫特征包括中位荧光强度(MFI),相对细胞计数(RC),绝对细胞计数(AC),和形态参数(MP),这是由公布的GWAS确定的,以及IEUOpenGWAS数据库中的公开数据。MR的主要分析方法是方差逆加权(IVW)。还评估了异质性和水平多效性。
    5种免疫表型,包括CD62L-DC%DC,IgD+CD38dim%B细胞,CMCD4+T细胞上的CD3,CD45RA-CD4+T细胞上的CD3,CD39+CD4+Treg上的CD3可能增加葡萄膜炎的风险。5种免疫表型,包括CD33dimHLADR-髓样细胞上的CD11b,CD33dimHLADR+CD11b-骨髓细胞上的HLADR,CD14-CD16+%单核细胞,CD14-CD16+单核细胞上的HLADR和CD14-CD16+单核细胞上的PDL-1与葡萄膜炎的风险呈负相关。其中,CD14-CD16单核细胞上的HLADR(OR=0.921,95CI=0.875-0.970,P=0.001)和CD33dimHLADRCD11b-上的HLADR(OR=0.879,95CI=0.833-0.927,P=0.00)与葡萄膜炎的风险呈双向负相关。
    这些结果表明,10种免疫细胞性状与葡萄膜炎的发病风险显著相关,其中2种与葡萄膜炎双向密切相关,在排除了一些免疫疾病等混杂因素的影响后,为葡萄膜炎的免疫机制研究提供了新的思路和治疗靶点。
    UNASSIGNED: Uveitis, characterized by inflammation of the iris, ciliary body, and choroid, presents a significant global clinical challenge, contributing substantially to visual impairment. Risk factors include autoimmune diseases and immune cell dysfunctions, yet many remain unidentified. Immune cells, notably T cells, B cells, and monocytes, play pivotal roles in uveitis pathogenesis. While biologic agents show promise, comprehensive studies on immune cell types in ocular diseases are lacking. Genome-wide association studies (GWAS) and Mendelian randomization (MR) present promising avenues to elucidate genetic susceptibilities and causal relationships between immune cell traits and uveitis risk.
    UNASSIGNED: Two-sample MR analysis was used to evaluate the causal relationship between 731 immune cells and uveitis, and genome-wide significance analysis was performed for genetic variation in 731 immune cells traits (P < 5 × 10-8). Immune characteristics include median fluorescence intensity (MFI), relative cell counts (RC), absolute cell counts (AC), and morphological parameters (MP), which were determined by published GWAS, and public data from the IEU Open GWAS database. The main analysis method of MR is inverse variance weighting (IVW). Heterogeneity and horizontal pleiotropy were also assessed.
    UNASSIGNED: 5 immunophenotypes, including CD62L-DC %DC, IgD+ CD38dim %B cell, CD3 on CM CD4+T cell, CD3 on CD45RA-CD4 +T cell, and CD3 on CD39+ CD4+ Treg may increase the risk of uveitis. 5 immunophenotypes, including CD11b on CD33dim HLA DR-Myeloid cell, HLA DR on CD33dim HLA DR+ CD11b-myeloid cell, CD14-CD16 + %monocyte, HLA DR on CD14-CD16 + monocyte and PDL-1 on CD14-CD16 + monocyte was negatively associated with the risk of uveitis. Among them, HLA DR on CD14-CD16 + monocyte (OR=0.921, 95%CI =0.875-0.970, P=0.001) and HLA DR on CD33dim HLA DR+ CD11b- (OR=0.879, 95%CI = 0.833-0.927, P=0.00) were negatively associated with the risk of uveitis in bi-direction.
    UNASSIGNED: These results indicate that 10 immune cells traits are significantly associated with the risk of developing uveitis and 2 of them were strongly associated with uveitis bi-directionally, after excluding the effects of confounding factors such as some immune diseases, which provided new ideas and therapeutic targets for the study of immune mechanism of uveitis.
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