biomarker

生物标志物
  • 文章类型: Case Reports
    在乳腺癌复发期间,根据原发肿瘤的生物学特性计划药物治疗。然而,这些变化背后的机制尚未明确。一名59岁的女性在23年前接受了乳腺癌手术,并接受了2年的术后激素治疗。她有腹胀和腹水积液,腹水穿刺后被诊断为因腔型乳腺癌引起的癌性腹膜炎。她接受了第四行治疗。随后,观察到胸腔积液,并诊断为人表皮生长因子受体2型乳腺癌,因为胸膜固定术。此病例表明,基于胸腹水细胞学的细胞块诊断方法不仅可用于确认原发性肿瘤,而且可用于诊断乳腺癌的生物学特征。在乳腺癌复发的治疗中,计划治疗很重要,包括积极的转移再活检。
    During breast cancer recurrence, drug therapy is planned based on the biological characteristics of the primary tumor. However, the mechanisms underlying these changes have not yet been clarified. A 59-year-old woman underwent breast cancer surgery 23 years previously and received postoperative hormone therapy for 2 years. She had abdominal distention and ascites effusion and was diagnosed with carcinomatous peritonitis due to luminal-type breast cancer after ascites puncture. She received up to the fourth line of treatment. Subsequently, pleural effusion was observed and human epidermal growth factor receptor 2 type breast cancer was diagnosed because of pleurodesis. This case suggests that the cell block diagnostic method based on thoracic and ascites fluid cytology is useful not only for confirming the primary tumor but also for diagnosing the biological characteristics of breast cancer. In the treatment of breast cancer recurrence, it is important to plan the treatment, including aggressive re-biopsy of metastases.
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  • 文章类型: Journal Article
    背景虽然膝骨关节炎(KOA)和骨质疏松症(OP)表现出不同的病理生理,他们有许多相似之处。这些健康状况常见于老年人,尤其是在女性中。本研究的目的是探讨微小RNA(miRNA)122-5p(miR-122-5p)在受KOA和OP影响的人群中的表达。主要目的是确定诊断生物标志物和潜在的治疗目标,这可以帮助开发个性化的治疗方法。方法作为研究的一部分,总共从参与者那里收集了268份血清样本,他们分为四组:KOA,OP,KOA和OP,和控制,每组67名受试者。使用QIAGEN的miRNeasy血清/血浆试剂盒(Hilden,德国)。使用实时定量聚合酶链反应检查各组中miR-122-5p的表达。结果miR-122-5p在三组中的表达(KOA,OP,和常见组的KOA和OP)显着上调,在这两种疾病的组中,倍数变化值要高得多。结论这些结果可能有助于识别处于危险中的病例,早期诊断,和发展,并且也可能有助于在患有KOA和OP的受试者中发展治疗靶标。
    Background Although knee osteoarthritis (KOA) and osteoporosis (OP) manifest distinct pathophysiologies, they share numerous similarities. These health conditions are commonly found in older individuals, particularly among women. The objective of this study is to explore the expression of micro-RNA (miRNA) 122-5p (miR-122-5p) in people affected by both KOA and OP. The main aim is to identify diagnostic biomarkers and potential therapeutic targets, which could help develop personalized treatment approaches. Methods As part of the study, a total of 268 serum samples were collected from the participants, who were divided into four groups: KOA, OP, KOA and OP, and controls, with 67 subjects per group. The miRNA species-containing total RNA was isolated from the serum samples using an miRNeasy serum/plasma kit by QIAGEN (Hilden, Germany). The expression of miR-122-5p was examined in each group using real-time quantitative polymerase chain reaction. Results Expression of miR-122-5p in all three groups (KOA, OP, and common group of KOA and OP) was significantly upregulated, and the fold change value was much higher in the group having both diseases. Conclusions These results might contribute to the identification of cases at risk, early diagnosis, and development, and might also contribute to the development of therapeutic targets in subjects having both KOA and OP.
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  • 文章类型: Journal Article
    猪的胃肠道含有各种各样的微生物,形成一个复杂而动态的生态系统。各种内部和外部因素(如年龄、品种和饮食)可能会影响其组成。这项研究旨在调查饲养在不同深砂垫料上的德国Pietrain公猪的肠道微生物多样性(区域刨花,亚麻,大麻,拼写外壳,和刨花)通过16S-rDNA测序。此外,短链脂肪酸使用气相色谱分析。在试验过程中,从40只Pietrainboars中收集了两次新鲜的粪便样本(n=80)。尽管可以假设公猪口服了被褥,微生物组组成没有差异。主要的门是Firmicutes和拟杆菌属。不动杆菌被鉴定为育种公猪中精子质量差异(总精子运动性)的生物标志物。
    The swine gastrointestinal tract contains a great variety of microbes, forming a complex and dynamic ecosystem. Various internal and external factors (e.g. age, breed and diet) may influence its composition. This study aimed to investigate the gut microbial diversity of German Piétrain boars housed on different deep-litter bedding materials (regional wood shavings, linen, hemp, spelt husks, and wood shavings) via 16S-rDNA sequencing. Additionally, short-chain fatty acids were analysed using gas chromatography. Fresh faecal samples (n = 80) from 40 Piétrain boars were collected twice during the trial. Although it can be assumed that boars ingest bedding orally, no differences in the microbiome composition could be found. The main phyla were Firmicutes and Bacteroides. Acinetobacter was identified as a biomarker for sperm quality differences (total sperm motility) in breeding boars.
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  • 文章类型: Journal Article
    眼底自发荧光(FAF)是一种快速且无创的成像方式,有助于检测视网膜和脉络膜内的病理异常。这篇叙述性综述和病例系列概述了FAF在后葡萄膜炎和全葡萄膜炎中的当前应用。文献回顾了有关特定后部和全葡萄膜炎实体的FAF病变特征以及FAF诊断和监测疾病的益处和局限性的文章。描述了非感染性和感染性葡萄膜炎形式以及伪装综合征的FAF特征。取决于葡萄膜炎实体,FAF在检测疾病和跟踪临床过程中具有诊断价值。激发波长不同的当前可用的FAF模式可以根据疾病实体和活动提供不同的病理见解。需要进一步研究FAF模式的比较及其对葡萄膜炎诊断和监测的个人价值。
    Fundus autofluorescence (FAF) is a prompt and non-invasive imaging modality helpful in detecting pathological abnormalities within the retina and the choroid. This narrative review and case series provides an overview on the current application of FAF in posterior and panuveitis. The literature was reviewed for articles on lesion characteristics on FAF of specific posterior and panuveitis entities as well as benefits and limitations of FAF for diagnosing and monitoring disease. FAF characteristics are described for non-infectious and infectious uveitis forms as well as masquerade syndromes. Dependent on the uveitis entity, FAF is of diagnostic value in detecting disease and following the clinical course. Currently available FAF modalities which differ in excitation wavelengths can provide different pathological insights depending on disease entity and activity. Further studies on the comparison of FAF modalities and their individual value for uveitis diagnosis and monitoring are warranted.
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  • 文章类型: Journal Article
    目的:本研究旨在通过回顾性研究验证一组癫痫发作易感性的候选生物标志物,多点病例对照研究,并确定从常规收集的脑电图(EEG)中大量队列(包括癫痫和常见的替代疾病,例如非癫痫发作障碍)中得出的这些生物标志物的稳健性。
    方法:数据库由来自648名受试者的814个脑电图记录组成,从英国八个国家卫生服务机构收集。临床非贡献脑电图记录由经验丰富的临床科学家鉴定(N=281;152替代条件,129癫痫)。八个计算标记(光谱[n=2],基于网络的[n=4],和基于模型的[n=2])在每个记录中计算。使用两层交叉验证方法开发了基于集成的分类器。我们使用标准回归方法来评估潜在的混杂变量(例如,年龄,性别,治疗状态,合并症)影响模型性能。
    结果:我们发现,在具有临床非贡献性正常脑电图的队列中,平衡准确率为68%(灵敏度=61%,特异性=75%,阳性预测值=55%,阴性预测值=79%,诊断比值比=4.64,接受者操作特征曲线下面积=0.72)。小组水平分析发现,没有证据表明任何潜在的混杂变量显着影响整体绩效。
    结论:这些结果提供了证据,表明该组生物标志物可以为临床决策提供额外价值,为减少诊断延迟和误诊率的决策支持工具提供基础。因此,未来的工作应该评估在精心设计的前瞻性研究中利用这些生物标志物时诊断产量和诊断时间的变化。
    OBJECTIVE: This study was undertaken to validate a set of candidate biomarkers of seizure susceptibility in a retrospective, multisite case-control study, and to determine the robustness of these biomarkers derived from routinely collected electroencephalography (EEG) within a large cohort (both epilepsy and common alternative conditions such as nonepileptic attack disorder).
    METHODS: The database consisted of 814 EEG recordings from 648 subjects, collected from eight National Health Service sites across the UK. Clinically noncontributory EEG recordings were identified by an experienced clinical scientist (N = 281; 152 alternative conditions, 129 epilepsy). Eight computational markers (spectral [n = 2], network-based [n = 4], and model-based [n = 2]) were calculated within each recording. Ensemble-based classifiers were developed using a two-tier cross-validation approach. We used standard regression methods to assess whether potential confounding variables (e.g., age, gender, treatment status, comorbidity) impacted model performance.
    RESULTS: We found levels of balanced accuracy of 68% across the cohort with clinically noncontributory normal EEGs (sensitivity =61%, specificity =75%, positive predictive value =55%, negative predictive value =79%, diagnostic odds ratio =4.64, area under receiver operated characteristics curve =.72). Group level analysis found no evidence suggesting any of the potential confounding variables significantly impacted the overall performance.
    CONCLUSIONS: These results provide evidence that the set of biomarkers could provide additional value to clinical decision-making, providing the foundation for a decision support tool that could reduce diagnostic delay and misdiagnosis rates. Future work should therefore assess the change in diagnostic yield and time to diagnosis when utilizing these biomarkers in carefully designed prospective studies.
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  • 文章类型: Case Reports
    本报告概述了一例儿童患有一种先天性糖基化疾病(CDG),称为ALG2-CDG(OMIM607906)。表现为由ALG2中鉴定的变体引起的先天性肌无力综合征(CMS),其编码参与N-糖基化早期步骤的α1,3-甘露糖基转移酶(EC2.4.1.132)。迄今为止,14例ALG2-CDG已在世界范围内记录。从出生,这个孩子经历了围产期窒息,肌肉无力,进食困难与没有吸吮反射有关,先天性髋关节脱位,和低张力。随着时间的推移,出现了额外的并发症,如吸气喘鸣,胃食管反流,低摄入量,反复发作,呼吸道感染,无法保持头部直立,和全球发展延迟。全基因组测序(WGS)揭示了复合杂合性中存在两个ALG2变体:一个新的变体c.1055_1056delinsTGAp。(Ser352Leufs*3)和一个不确定意义的变体(VUS)c.964C>Ap。(Pro322Thr)。其他研究,包括碳水化合物缺乏的转铁蛋白(CDT)的测定,显示出轻度的I型CDG模式和异常的转铁蛋白糖型的存在,其中包含由一种唾液酸组成的线性七糖,一个半乳糖,一种N-乙酰氨基葡萄糖,两种甘露糖和两种N-乙酰葡糖胺(NeuAc-Gal-GlcNAc-Man2-GlcNAc2),ALG2-CDG诊断生物标志物,证实这些变异的致病性。
    This report outlines the case of a child affected by a type of congenital disorder of glycosylation (CDG) known as ALG2-CDG (OMIM 607906), presenting as a congenital myasthenic syndrome (CMS) caused by variants identified in ALG2, which encodes an α1,3-mannosyltransferase (EC 2.4.1.132) involved in the early steps of N-glycosylation. To date, fourteen cases of ALG2-CDG have been documented worldwide. From birth, the child experienced perinatal asphyxia, muscular weakness, feeding difficulties linked to an absence of the sucking reflex, congenital hip dislocation, and hypotonia. Over time, additional complications emerged, such as inspiratory stridor, gastroesophageal reflux, low intake, recurrent seizures, respiratory infections, an inability to maintain the head upright, and a global developmental delay. Whole genome sequencing (WGS) revealed the presence of two ALG2 variants in compound heterozygosity: a novel variant c.1055_1056delinsTGA p.(Ser352Leufs*3) and a variant of uncertain significance (VUS) c.964C>A p.(Pro322Thr). Additional studies, including determination of carbohydrate-deficient transferrin (CDT) revealed a mild type I CDG pattern and the presence of an abnormal transferrin glycoform containing a linear heptasaccharide consisting of one sialic acid, one galactose, one N-acetyl-glucosamine, two mannoses and two N-acetylglucosamines (NeuAc-Gal-GlcNAc-Man2-GlcNAc2), ALG2-CDG diagnostic biomarker, confirming the pathogenicity of these variants.
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  • 文章类型: Case Reports
    法布里病(FD)是一种罕见的,X连锁溶酶体贮积症,可导致致命性终末期肾病,心力衰竭,和大脑闭塞事件。模糊的临床症状和稀缺性通常意味着诊断和潜在的治疗被延迟。FD患者的眼科发现有助于建立早期诊断和及时治疗。FD患者的频域光学相干断层扫描(SD-OCT)成像显示,视网膜内层的特征模式具有高反射焦点(HRF)。我们发现HRF在视网膜内核层的深层和浅表边界处呈线性分布,可能反映血管壁内解剖血管丛和FD相关的鞘脂沉积。这些结果突出了SD-OCT在FD中的潜在用途,以及它如何帮助未分化患者的诊断,预测,和疾病监测。
    Fabry disease (FD) is a rare, X-linked lysosomal storage disorder that can result in fatal end-stage renal disease, heart failure, and cerebro-occlusive events. Vague clinical symptoms and rarity often mean diagnosis and potential treatment is delayed. Ophthalmic findings in FD patients can be helpful in establishing an early diagnosis and timely treatment. Spectral domain optical coherence tomography (SD-OCT) imaging in FD patients shows hyper-reflective foci (HRF) in characteristic patterns within the inner retinal layers. We found that the HRF was localised in linear distributions at the deep and superficial borders of the retinal inner nuclear layer, likely reflecting anatomic vascular plexuses and FD-related sphingolipid deposition within the vessel walls. These results highlight the potential use of SD-OCT in FD and how it may aid diagnosis in undifferentiated patients, prognostication, and disease monitoring.
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  • 文章类型: Case Reports
    原发性玻璃体视网膜淋巴瘤(PVRL)通常与中枢神经系统受累有关,导致死亡率上升,因此,足以成为PVRL潜在生物标志物的成像特征很重要,诊断或评估疾病活动。本报告详细介绍了一名68岁男性的情况,该男性双眼视力模糊持续2个月。眼底检查显示玻璃体混浊和双眼周围眼底多发不同大小的视网膜下黄色结节性病变。后极神经视网膜多处垂直超反射病变,在中央凹的视网膜外边界模糊,在左眼的扫频源光学相干断层扫描(SS-OCT)上显示出周围视网膜的视网膜下色素上皮(RPE)空间的高反射病变。在视网膜深毛细血管丛(DCP)层的扫频源光学相干断层扫描血管造影(SS-OCTA)图像上检测到与垂直超反射病变相对应的超流信号。值得注意的是,超流信号,精确定位在视网膜血管周围,从神经纤维层到外部网状层,被假定为源于浸润的视网膜血管的扩张。左眼玻璃体病理结果证实了PVRL的诊断。玻璃体内注射甲氨蝶呤的治疗导致最佳矫正视力(BCVA)的显着改善和SS-OCTA上显示的过流微浸润病变的消退。总之,SS-OCTA有效地描绘了PVRL患者黄斑后极区的垂直超反射病变和相应的超流信号。玻璃体内注射甲氨蝶呤后,这些病变显着减少。我们推测,SS-OCTA上的特定超流信号可以作为PVRL的潜在生物标志物,和SS-OCTA有望促进PVRL病例的早期诊断和监测治疗反应。
    Primary vitreoretinal lymphoma (PVRL) is often associated with central nervous system involvement, contributing to a heightened mortality rate, thus imaging features that are characteristic enough to be potential biomarkers of PVRL are important, either in diagnosis or in assessment of disease activity. This report details the case of a 68-year-old male who presented with blurred vision in both eyes persisting for 2 months. Fundus examination demonstrated vitreous opacity and multiple subretinal yellow nodular lesions of varying sizes in the peripheral fundus of both eyes. Multiple vertical hyperreflective lesions in the neural retina of posterior pole, indistinct outer retina borders in the fovea, and hyperreflective lesions in the sub-retinal pigment epithelium (RPE) space of the peripheral retina were demonstrated on swept-source optical coherence tomography (SS-OCT) of the left eye. Hyperflow signals corresponding to the vertical hyperreflective lesions were detected on swept-source optical coherence tomography angiography (SS-OCTA) images of retinal deep capillary plexus (DCP) layer. Notably, the hyperflow signals, precisely located around retinal vessels from the nerve fiber layer to the outer plexiform layer, were postulated to stem from the dilation of infiltrated retinal vessels. Vitreous pathological results of the left eye confirmed the diagnosis of PVRL. Treatments with intravitreal methotrexate injections led to a marked improvement of best-corrected visual acuity (BCVA) and regression of the hyperflow microinfiltration lesions demonstrated on SS-OCTA. In conclusion, SS-OCTA effectively delineated the vertical hyperreflective lesions and corresponding hyperflow signals in the posterior pole macular region of a patient with PVRL. These lesions significantly diminished following intravitreal methotrexate injections. We speculated that the specific hyperflow signals on SS-OCTA could act as a potential biomarker of PVRL, and SS-OCTA holds promise in facilitating early diagnosis and monitoring therapeutic responses in PVRL cases.
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  • 文章类型: Case Reports
    癌症患者血浆中循环肿瘤DNA(ctDNA)的检测正在成为一种非常敏感和特异的预后生物标志物。以前对ctDNA的研究集中在ctDNA检测预测微转移和最终临床转移复发的能力上。关于ctDNA在监测对局部治疗的反应中的作用的数据很少。本研究报告了一名早期小叶乳腺癌患者的病例,用可检测的ctDNA测试,通过对乳房进行局部放射治疗解决。这种情况表明ctDNA足够灵敏,可以检测微小残留病的反应,局限在乳房,放射治疗,因此可能有助于为局部乳腺癌治疗提供适应症。
    The detection of circulating tumor DNA (ctDNA) in the plasma of cancer patients is emerging as a very sensitive and specific prognostic biomarker. Previous studies with ctDNA have focused on the ability of ctDNA detection to predict micrometastatic and eventual clinical metastatic relapse. There are few data on the role of ctDNA in monitoring response to local therapy. The present study reports the case of a patient with early-stage lobular breast cancer, with a detectable ctDNA test which resolved with local radiotherapy to the breast. This case suggests that ctDNA is sensitive enough to detect the response of minimal residual disease, localized in the breast, to radiation therapy, and thus may assist in providing indications for local breast cancer treatment.
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  • 文章类型: Journal Article
    目的:本研究旨在探讨CD276与肾透明细胞癌(ccRCC)的关系,并评估CD276在ccRCC中的诊断价值。
    方法:使用TCGA和GEO数据库获得的数据对ccRCC和癌旁组织中CD276的表达水平进行比较和回顾性分析。对其临床资料进行前瞻性分析。免疫组织化学和RT-PCR分析用于在mRNA和蛋白质水平上分析CD276的表达。这些分析比较了从70例ccRCC患者获得的ccRCC组织和癌旁组织之间的表达。接下来,采用ELISA方法对70例ccRCC患者和72例健康人的外周血标本进行分析,促进ccRCC患者与正常对照的分化。最后,我们利用Kaplan-Meier方法生成ROC曲线,以评估CD276对ccRCC的诊断价值.
    结果:对TCGA和GEO数据的分析表明,ccRCC组织中CD276的mRNA表达高于癌旁组织(P<0.05)。IHC和RT-PCR的临床验证证实,ccRCC组织中CD276的表达高于癌旁组织,在mRNA和蛋白质水平(P<0.05)。ELISA显示ccRCC患者中CD276的表达高于正常人,病理分级较高的患者外周血CD276的表达高于病理分级较低的患者(P<0.05)。从上述三个数据集绘制的ROC曲线表明,CD276对ccRCC具有较高的诊断价值(AUC分别为.894,.795,.938)。
    结论:ccRCC组织中CD276的表达较高,且与病理分级呈正相关。因此,CD276可作为ccRCC预测的分子生物标志物。
    OBJECTIVE: This study aimed to explore the relationship between CD276 and clear cell renal carcinoma (ccRCC) and assess the diagnostic value of CD276 in ccRCC.
    METHODS: Expression levels of CD276 in ccRCC and para-cancer tissues were compared and analyzed retrospectively using data obtained from TCGA and GEO databases. The clinical data was analyzed prospectively. Immunohistochemistry and RT-PCR analyses were used to analyze the expression of CD276 at the mRNA and protein levels. These analyses compared the expression between ccRCC tissues and para-cancer tissues obtained from 70 patients with ccRCC. Next, ELISA was used to analyze peripheral blood samples from 70 patients with ccRCC and 72 healthy individuals, facilitating the differentiation of ccRCC patients from normal controls. Finally, we utilized the Kaplan-Meier method to generate ROC curves for assessing the diagnostic value of CD276 for ccRCC.
    RESULTS: Analysis of TCGA and GEO data revealed that the mRNA expression of CD276 was higher in ccRCC tissues than in para-cancer tissues (P < .05). Clinical validation using IHC and RT-PCR confirmed that the expression of CD276 was higher in ccRCC tissues than in para-cancer tissues, both at the mRNA and protein levels (P < .05). ELISA demonstrated that the expression of CD276 was higher in ccRCC patients than in normal individuals, and patients with a higher pathological grade showed higher expression of CD276 in the peripheral blood than those with a lower pathological grade (P < .05). ROC curves drawn from the above three datasets demonstrated that CD276 had a high diagnostic value for ccRCC (AUC = .894, .795, .938, respectively).
    CONCLUSIONS: The expression of CD276 was higher in ccRCC tissues and positively associated with the pathological grade. Therefore, CD276 may serve as a molecular biomarker for ccRCC prediction.
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