biomarker

生物标志物
  • 文章类型: Journal Article
    转移RNA衍生的小RNA(tsRNA)是一类来源于tRNA的非编码小RNA(sncRNA)分子,包括tRNA衍生片段(tRFs)和tRNA半分子(tiRNAs)。tsRNAs可以通过参与基因表达调控来影响细胞功能,翻译规则,细胞间信号转导,和免疫反应。它们已被证明在各种人类疾病中起着重要作用,包括心血管疾病(CVD)。tsRNA表达的靶向调控可以影响CVD的进展。由病理条件诱导的tsRNAs在释放到细胞外时可以被检测到,赋予它们作为疾病生物标志物的巨大潜力。这里,我们回顾了生物发生,tsRNAs的降解过程及相关功能机制,并讨论了tsRNAs在不同CVD中的研究进展和应用前景,为心血管疾病的治疗提供新的视角。
    Transfer RNA-derived small RNAs (tsRNAs) are a class of small non-coding RNA (sncRNA) molecules derived from tRNA, including tRNA derived fragments (tRFs) and tRNA halfs (tiRNAs). tsRNAs can affect cell functions by participating in gene expression regulation, translation regulation, intercellular signal transduction, and immune response. They have been shown to play an important role in various human diseases, including cardiovascular diseases (CVDs). Targeted regulation of tsRNAs expression can affect the progression of CVDs. The tsRNAs induced by pathological conditions can be detected when released into the extracellular, giving them enormous potential as disease biomarkers. Here, we review the biogenesis, degradation process and related functional mechanisms of tsRNAs, and discuss the research progress and application prospects of tsRNAs in different CVDs, to provide a new perspective on the treatment of CVDs.
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  • 文章类型: Journal Article
    人体消化系统肿瘤的发病率相对较高,包括食道癌,肝癌,胰腺癌,胃癌和结直肠癌。这些恶性肿瘤起因于环境和遗传因素的复杂相互作用。其中,长链非编码RNA(lncRNA),不能翻译成蛋白质,在发展中发挥重要作用,programming,肿瘤的迁移和预后。小核仁RNA宿主基因16(SNHG16)是一种典型的lncRNA,其与消化系统肿瘤的关系已被广泛探讨。流行的假设表明,SNHG16在消化系统肿瘤中的主要分子机制涉及它作为与其他蛋白质相互作用的竞争性内源性RNA发挥作用。调节各种基因并影响下游靶分子。本文综述了SNHG16与多种消化系统肿瘤的关系,包括其生物学功能,潜在的机制和潜在的临床意义。此外,它概述了SNHG16表达与相关危险因素之间的关联,比如吸烟,感染和饮食。本综述表明SNHG16有望作为人类消化系统癌症的潜在生物标志物和治疗靶标。
    The incidence of tumors in the human digestive system is relatively high, including esophageal cancer, liver cancer, pancreatic cancer, gastric cancer and colorectal cancer. These malignancies arise from a complex interplay of environmental and genetic factors. Among them, long non‑coding RNAs (lncRNAs), which cannot be translated into proteins, serve an important role in the development, progression, migration and prognosis of tumors. Small nucleolar RNA host gene 16 (SNHG16) is a typical lncRNA, and its relationship with digestive system tumors has been widely explored. The prevailing hypothesis suggests that the principal molecular mechanism of SNHG16 in digestive system tumors involves it functioning as a competitive endogenous RNA that interacts with other proteins, regulates various genes and influences a downstream target molecule. The present review summarizes recent research on the relationship between SNHG16 and numerous types of digestive system cancer, encompassing its biological functions, underlying mechanisms and potential clinical implications. Furthermore, it outlines the association between SNHG16 expression and pertinent risk factors, such as smoking, infection and diet. The present review indicated the promise of SNHG16 as a potential biomarker and therapeutic target in human digestive system cancer.
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  • 文章类型: Journal Article
    背景:对神经性疼痛的理解仍然不完整,强调需要研究生物标志物以改善诊断和治疗。这篇综述的重点是确定血液和脑脊液中不同神经病理性疼痛的潜在生物标志物。
    方法:在六个数据库中进行搜索:PubMed,WebofScience,Scopus,科克伦图书馆,EMBASE,和CINAHL。包括观察性研究,即横截面,队列,和病例控制,评估血液或脑脊液中的定量生物标志物。数据是定性合成的,使用R进行荟萃分析。该研究在PROSPERO注册,ID为CRD42022233769。
    结果:文献检索导致16项定性研究和12项定量分析研究,涵盖18岁以上患有疼痛性神经病的患者。总共分析了1403名受试者,确定C反应蛋白(CRP)水平没有显着差异,白细胞介素-6(IL-6),和肿瘤坏死因子-α(TNF-α)在有和没有疼痛的患者之间。尽管评分者间的可靠性很高,而且有足够的偏差评估,结果表明,炎症生物标志物的差异可以忽略不计,由于研究中值得注意的发表偏倚和异质性,这表明需要进一步研究。
    结论:我们的综述强调了神经性疼痛的复杂性和识别生物标志物的挑战,CRP没有显著差异,有疼痛和无疼痛患者之间的IL-6和TNF-α水平。尽管方法稳健,结果受到发表偏倚和异质性的限制.这强调需要进一步研究以发现确定的生物标志物,以改善神经性疼痛的诊断和个性化治疗。
    BACKGROUND: The understanding of neuropathic pain remains incomplete, highlighting the need for research on biomarkers for improved diagnosis and treatment. This review focuses on identifying potential biomarkers in blood and cerebrospinal fluid for neuropathic pain in different neuropathies.
    METHODS: Searches were performed in six databases: PubMed, Web of Science, Scopus, Cochrane Library, EMBASE, and CINAHL. Included were observational studies, namely cross-sectional, cohort, and case-control, that evaluated quantitative biomarkers in blood or cerebrospinal fluid. Data were qualitatively synthesized, and meta-analyses were conducted using R. The study is registered with PROSPERO under the ID CRD42022323769.
    RESULTS: The literature search resulted in 16 studies for qualitative and 12 for quantitative analysis, covering patients over 18 years of age with painful neuropathies. A total of 1403 subjects were analyzed, identifying no significant differences in levels of C-Reactive Protein (CRP), Interleukin-6 (IL-6), and Tumor Necrosis Factor-alpha (TNF-alpha) between patients with and without pain. Despite the high inter-rater reliability and adequate bias assessment, the results suggest negligible differences in inflammatory biomarkers, with noted publication bias and heterogeneity among studies, indicating the need for further research.
    CONCLUSIONS: Our review underscores the complex nature of neuropathic pain and the challenges in identifying biomarkers, with no significant differences found in CRP, IL-6, and TNF-alpha levels between patients with and without pain. Despite methodological robustness, the results are limited by publication bias and heterogeneity. This emphasizes the need for further research to discover definitive biomarkers for improved diagnosis and personalized treatment of neuropathic pain.
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  • 文章类型: Journal Article
    帕金森病,包括帕金森病(PD),多系统萎缩(MSA),路易体痴呆(DLB),皮质基底综合征(CBS)和进行性核上性麻痹(PSP)往往因症状重叠和缺乏精确的生物标志物而被误诊.此外,目前还没有确定前驱疾病如REM行为障碍(RBD)的进展和转化的方法。细胞外囊泡(EV),含有生物分子的混合物,已经成为帕金森病诊断的潜在来源。然而,以往研究中的不一致使得其诊断潜力不明确.我们进行了荟萃分析,遵循PRISMA准则,为了评估从各种体液中分离出来的普通电动汽车的诊断准确性,包括脑脊液(CSF),等离子体,血清,尿液或唾液,区分帕金森病患者与健康对照(HCs)。荟萃分析包括21项研究,包括1285名PD患者,24与MSA,105与DLB,99与PSP,101与RBD和783HC。仅对患有PD和HCs的患者进行了进一步的分析,考虑到其他比较的数量有限。使用双变量和分层接收机操作特性(HSROC)模型,荟萃分析显示,在区分PD和HCs患者方面,诊断准确性中等,具有实质性的异质性和发表偏倚。修剪和填充方法揭示了至少两项缺失的研究,其诊断准确性为零或低。CSF-EV显示出更好的整体诊断准确性,而等离子电动汽车的性能最低。与源自中枢神经系统的电动汽车相比,普通电动汽车显示出更高的诊断准确性,这更耗时,隔离劳动力和成本密集型。总之,在信守承诺的同时,由于现有的挑战,在一般电动汽车中利用生物标志物进行PD诊断仍然不可行。重点应转向通过标准化来协调该领域,合作,和严格的验证。国际细胞外囊泡学会(ISEV)目前的努力旨在通过严格和标准化来提高EV相关研究的准确性和可重复性。旨在弥合理论与实际临床应用之间的差距。
    Parkinsonian disorders, including Parkinson\'s disease (PD), multiple system atrophy (MSA), dementia with Lewy body (DLB), corticobasal syndrome (CBS) and progressive supranuclear palsy (PSP) are often misdiagnosed due to overlapping symptoms and the absence of precise biomarkers. Furthermore, there are no current methods to ascertain the progression and conversion of prodromal conditions such as REM behaviour disorder (RBD). Extracellular vesicles (EVs), containing a mixture of biomolecules, have emerged as potential sources for parkinsonian diagnostics. However, inconsistencies in previous studies have left their diagnostic potential unclear. We conducted a meta-analysis, following PRISMA guidelines, to assess the diagnostic accuracy of general EVs isolated from various bodily fluids, including cerebrospinal fluid (CSF), plasma, serum, urine or saliva, in differentiating patients with parkinsonian disorders from healthy controls (HCs). The meta-analysis included 21 studies encompassing 1285 patients with PD, 24 with MSA, 105 with DLB, 99 with PSP, 101 with RBD and 783 HCs. Further analyses were conducted only for patients with PD versus HCs, given the limited number for other comparisons. Using bivariate and hierarchal receiver operating characteristics (HSROC) models, the meta-analysis revealed moderate diagnostic accuracy in distinguishing patients with PD from HCs, with substantial heterogeneity and publication bias. The trim-and-fill method revealed at least two missing studies with null or low diagnostic accuracy. CSF-EVs showed better overall diagnostic accuracy, while plasma-EVs had the lowest performance. General EVs demonstrated higher diagnostic accuracy compared to CNS-originating EVs, which are more time-consuming, labour- and cost-intensive to isolate. In conclusion, while holding promise, utilizing biomarkers in general EVs for PD diagnosis remains unfeasible due to existing challenges. The focus should shift toward harmonizing the field through standardization, collaboration, and rigorous validation. Current efforts by the International Society For Extracellular Vesicles (ISEV) aim to enhance the accuracy and reproducibility of EV-related research through rigor and standardization, aiming to bridge the gap between theory and practical clinical application.
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  • 文章类型: Journal Article
    抑郁症是全世界最常见的精神障碍。抗抑郁药和心理治疗都能有效治疗抑郁症,但是对这些治疗的反应通常是不完全的。一些研究人员提倡以瑜伽为基础的干预措施(YBI)作为抑郁症的替代治疗方法。最近的研究试图确定与YBI的抗抑郁作用相关的生物学机制。在这次范围审查中,根据PRISMA-ScR指南进行,本研究检索了PubMed和Scopus数据库,以检索有关抑郁症患者对YBI应答的生物标志物的研究.还对这些研究进行了严格审查,以评估其方法学质量和任何偏倚来源。19项研究纳入审查。基于这些研究,有初步证据表明,YBI可能与抑郁症患者血清脑源性神经营养因子(BDNF)升高,血清皮质醇和白细胞介素-6(IL-6)降低有关。然而,其中许多变化也在控制武器中观察到,研究总体质量较低。目前,不能断定抑郁症患者对YBI的反应有可靠的生物标志物,尽管有一些潜在的生物关联。这一领域的进一步进展将关键取决于研究设计的改进,特别是根据其他治疗方式的现有证据,最大限度地减少偏倚来源,并选择更特异和更敏感的生物标志物。
    Depression is the most common mental disorder worldwide. Both antidepressants and psychotherapy are effective in treating depression, but the response to these treatments is often incomplete. Yoga-based interventions (YBIs) have been advocated by some researchers as a promising form of alternative treatment for depression. Recent research has attempted to identify the biological mechanisms associated with the antidepressant actions of YBIs. In this scoping review, conducted according to the PRISMA-ScR guidelines, the PubMed and Scopus databases were searched to retrieve research on biomarkers of response to YBIs in patients with depression. These studies were also critically reviewed to evaluate their methodological quality and any sources of bias. Nineteen studies were included in the review. Based on these studies, there is preliminary evidence that YBIs may be associated with increased serum brain-derived neurotrophic factor (BDNF) and reduced serum cortisol and interleukin-6 (IL-6) in patients with depression. However, many of these changes were also observed in the control arms, and the overall quality of the research was low. At present, it cannot be concluded that there are reliable biomarkers of response to YBIs in depression, though there are some potential biological correlates. Further advances in this field will depend critically on improvements in study design, particularly the minimization of sources of bias and the selection of more specific and sensitive biomarkers based on existing evidence from other treatment modalities.
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  • 文章类型: Journal Article
    腺苷酸环化酶(AC)是一组将腺苷-5'-三磷酸(ATP)转化为环状腺苷3'的酶,5单磷酸盐(cAMP),细胞对激素和神经递质的反应中一种重要而普遍存在的信号分子。有九种跨膜(tmAC)形式,已被广泛研究;然而,第十,可溶性AC(sAC)的特征不那么广泛。眼睛是体内代谢最活跃的部位之一,在那里发现了大量的sAC,使其成为新疗法和生物标志物的目标。在角膜中,AC在内皮细胞功能中起作用,这对维持基质脱水至关重要,因此,清晰度。在视网膜上,AC与轴突细胞生长和存活有关。由于这些细胞在青光眼和损伤中不可逆转地受损,该分子可能为未来的治疗提供焦点。青光眼管理的另一个潜在领域是房水产生的来源,睫状体,其中AC也已确定。进一步了解泪腺功能对于治疗干眼症至关重要,一种常见的衰弱状态。sAC与泪液产生有关,可以作为治疗靶点。总的来说,ACs是一个令人兴奋的眼部健康研究领域,为未来的医学治疗和诊断提供多种途径。这篇综述论文探讨了AC在眼睛中的不同作用及其作为创新治疗目标的潜力。
    Adenylyl cyclases (ACs) are a group of enzymes that convert adenosine-5\'-triphosphate (ATP) to cyclic adenosine 3\',5\' monophosphate (cAMP), a vital and ubiquitous signalling molecule in cellular responses to hormones and neurotransmitters. There are nine transmembrane (tmAC) forms, which have been widely studied; however, the tenth, soluble AC (sAC) is less extensively characterised. The eye is one of the most metabolically active sites in the body, where sAC has been found in abundance, making it a target for novel therapeutics and biomarking. In the cornea, AC plays a role in endothelial cell function, which is vital in maintaining stromal dehydration, and therefore, clarity. In the retina, AC has been implicated in axon cell growth and survival. As these cells are irreversibly damaged in glaucoma and injury, this molecule may provide focus for future therapies. Another potential area for glaucoma management is the source of aqueous humour production, the ciliary body, where AC has also been identified. Furthering the understanding of lacrimal gland function is vital in managing dry eye disease, a common and debilitating condition. sAC has been linked to tear production and could serve as a therapeutic target. Overall, ACs are an exciting area of study in ocular health, offering multiple avenues for future medical therapies and diagnostics. This review paper explores the diverse roles of ACs in the eye and their potential as targets for innovative treatments.
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  • 文章类型: Journal Article
    目的:生物标志物作为治疗心力衰竭(HF)患者的预后和治疗效果指标工具至关重要。脑源性神经营养因子(BDNF)的系统水平可以增加HF生物标志物的情况,允许增强诊断功效,预后分层,和预测患者对给定治疗干预的反应,因为BDNF是心肌功能的主要指标之一。然而,BDNF是否是可靠的临床生物标志物有待临床验证.因此,我们旨在通过对现有研究的系统评价和荟萃分析来回答这一相关问题.
    结果:国际数据库,包括PubMed,Scopus,Embase,和WebofScience,全面搜索评估HF患者与非HF对照组BDNF水平或作为HF并发症预后因素的研究。数据提取并通过随机效应荟萃分析进行分析。计算标准化平均差(SMD)和95%置信区间(CI)以汇集研究结果。我们在最终审查中纳入了11项研究,其中6人进行了荟萃分析.这些研究分析了1420例HF患者,平均年龄65.4±11.2岁。Meta分析显示,HF患者的循环BDNF水平明显低于健康对照组(SMD-2.47,95%CI-4.39至-0.54,P值=0.01)。此外,纽约心脏协会功能分级较高的患者的BDNF水平较低.在个别研究中,不良临床结局如全因死亡率和HF再住院也与较低水平的BDNF相关。
    结论:HF患者的BDNF水平降低。最重要的是,我们观察到HF患者的BDNF水平降低与预后不良之间存在关联.我们的研究支持BDNF作为一种易于剂量的诊断和预后的生物标志物在HF的临床实践中实施。需要进一步的研究来具体解决这种能力。
    OBJECTIVE: Biomarkers are paramount for managing heart failure (HF) patients as prognostic and therapeutic efficacy index tools. Systemic levels of brain-derived neurotrophic factor (BDNF) can add to the HF biomarker scenario, allowing for potentiated efficacy in diagnosis, prognostic stratification, and prediction of patient response to a given therapeutic intervention because BDNF is one of the primary rulers of myocardial function. Yet, whether BDNF is a reliable clinical biomarker awaits clinical validation. Hence, we aimed to answer this relevant question via a systematic review and meta-analysis of existing studies.
    RESULTS: International databases, including PubMed, Scopus, Embase, and the Web of Science, were comprehensively searched for studies assessing BDNF levels in patients with HF versus non-HF controls or as a prognostic factor for HF complications. Data were extracted and analysed by random-effect meta-analysis. Standardized mean difference (SMD) and 95% confidence intervals (CIs) were computed to pool the results of studies. We included 11 studies in the final review, among which six underwent meta-analysis. These studies analysed 1420 HF patients, with a mean age of 65.4 ± 11.2 years. Meta-analysis revealed that patients with HF had significantly lower circulating BDNF levels than healthy controls (SMD -2.47, 95% CI -4.39 to -0.54, P-value = 0.01). Moreover, patients with higher New York Heart Association functional classification had lower levels of BDNF. Adverse clinical outcomes such as all-cause mortality and HF rehospitalization were also associated with lower levels of BDNF in individual studies.
    CONCLUSIONS: BDNF levels are decreased in patients with HF. Most importantly, we observed an association between lower BDNF levels and poor prognosis in patients with HF. Our study supports BDNF as an easy-to-dose diagnostic and prognostic biomarker to be implemented in clinical practice for HF. Further studies are warranted to address this ability specifically.
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  • 文章类型: Journal Article
    背景:锌状态的评估是困难的,但对于识别锌缺乏和评估改善锌状态的干预措施至关重要。
    目的:本系统综述(SR)和荟萃分析的目的是更新先前发表的锌状态生物标志物的SR,由欧洲微量营养素推荐联盟(EURRECA)网络于2009年进行,以回答以下问题:哪些锌状态的推定措施(生物标志物)适当地反映了至少2周的锌摄入量变化?
    方法:使用结构化搜索策略来识别MEDLINE(Ovid)在2007年1月至2022年9月之间发表的文章,Embase(Ovid),Cochrane系统评价数据库,和Cochrane中央控制试验登记册(CENTRAL)。使用先前定义的资格标准确定了相关文章。
    方法:提取数据并与先前SR的数据组合。
    方法:使用随机效应模型来计算使用STATA(StataCorp)的合并均值差异。评估所有结果的偏倚风险和证据的确定性。确定了先前报道的32种生物标志物中的7种的其他数据,以及自2007年以来发表的40项推定的生物标志物的数据。汇总数据分析证实,在健康的参与者中,血浆/血清锌浓度和尿锌排泄均对锌摄入量的变化有反应(血浆/血清:平均效应[95%CI],对照研究:2.17µmol/L[1.73,2.61];P<.005,I2=97.8;前后研究:2.87µmol/L[2.45,3.30];P<.005,I2=98.1%;尿锌:0.39mmol/mol肌酐[0.17,0.62];P<.005,I2=81.2;3.09µmol/day[0.16]。
    结论:更新的分析支持以下结论:在健康参与者的研究中,血浆/血清和尿锌对锌摄入量的变化有反应。确定了一些其他推定的生物标志物,但需要更多的研究来评估敏感性和可靠性。
    背景:PROSPEROno.CRD42020219843。
    BACKGROUND: The assessment of zinc status is difficult but essential for the identification of zinc deficiency and evaluation of interventions to improve zinc status.
    OBJECTIVE: The purpose of this systematic review (SR) and meta-analysis was to update the previously published SR of biomarkers of zinc status, conducted by the European Micronutrient Recommendations Aligned (EURRECA) network in 2009, to answer the question: Which putative measures (biomarkers) of zinc status appropriately reflect a change in zinc intake of at least 2 weeks?
    METHODS: A structured search strategy was used to identify articles published between January 2007 and September 2022 from MEDLINE (Ovid), Embase (Ovid), Cochrane Database of Systematic Reviews, and Cochrane Central Register of Controlled Trials (CENTRAL). Relevant articles were identified using previously defined eligibility criteria.
    METHODS: Data were extracted and combined with data from the previous SR.
    METHODS: A random-effects model was used to calculate pooled mean differences using STATA (StataCorp). The risk of bias and the certainty of evidence for all outcomes were assessed. Additional data on 7 of the 32 previously reported biomarkers were identified, along with data on an additional 40 putative biomarkers from studies published since 2007. Pooled data analysis confirmed that, in healthy participants, both plasma/serum zinc concentration and urinary zinc excretion responded to changes in zinc intake (plasma/serum: mean effect [95% CI], controlled studies: 2.17 µmol/L [1.73, 2.61]; P < .005, I2 = 97.8; before-and-after studies: 2.87 µmol/L [2.45, 3.30]; P < .005, I2 = 98.1%; urine zinc: 0.39 mmol/mol creatinine [0.17, 0.62]; P < .005, I2 = 81.2; 3.09 µmol/day [0.16, 6.02]; P = .039, I2 = 94.3).
    CONCLUSIONS: The updated analyses support the conclusion that plasma/serum and urinary zinc respond to changes in zinc intake in studies of healthy participants. Several additional putative biomarkers were identified, but more studies are needed to assess the sensitivity and reliability.
    BACKGROUND: PROSPERO no. CRD42020219843.
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  • 文章类型: Journal Article
    心力衰竭(HF)的患病率很高,这对医疗保健成本有重大影响,患者死亡和生活质量。因此,人们一直非常关注寻找和使用生物标志物进行早期诊断,HF的预后和治疗。这项研究的概述提供了对HF生物标志物的当前状态及其许多用途的全面检查。它们在诊断HF中的作用,衡量其严重程度和监测其对治疗的反应都进行了讨论。在HF诊断和危险分层中特别有希望的是心脏特异性生物标志物,B型利钠肽和N末端B型利钠肽前体。氧化应激标志物,细胞外基质,肾功能,炎症和心肌肽在评估HF严重程度和预后方面显示出希望。MicroRNAs和胰岛素样生长因子是两种新兴的生物标志物,显示出有助于HF诊断和预后的潜力。
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  • 文章类型: Journal Article
    先兆子痫是一种多系统进行性疾病,是最严重的妊娠并发症之一。由于其发病机制不明确,子痫前期没有精确有效的治疗靶点,唯一可用的治疗策略是终止妊娠并消除临床症状。近年来,非编码RNA已成为先兆子痫研究的热点,并有望成为先兆子痫早期诊断的有效生物标志物。PIWI相互作用的RNA,与PIWI蛋白相互作用的新型小的非编码RNA,在转录或转录后水平参与各种疾病的发病机理。然而,PIWI相互作用RNA在先兆子痫发病机制中的作用机制尚不清楚.在这次审查中,我们讨论了PIWI相互作用RNA生物发生的现有研究的结果,功能,以及它们在先兆子痫中的可能作用,为PIWI相互作用的RNA在先兆子痫的早期诊断和临床治疗中的潜在应用提供了新的见解。
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