Secondary Metabolism

次级代谢
  • 文章类型: Journal Article
    这篇简短的评论旨在提请注意放线菌的生物技术潜力。它们作为抗生素来源和农业的主要用途足以不忽视它们;然而,正如我们将看到的,它们的生物技术应用更加广泛。远非打算解决这个问题,我们对过去23年发表的放线菌及其应用的研究进行了简短的调查。我们强调发现这些微生物的已知代谢物的新活性成分或新应用的观点,大约80年来,自从发现链霉素以来,一直是抗生素的主要来源。根据收集的数据,我们组织文本,以显示如何放线菌的世界主义和放线菌的进化生物和非生物生态关系转化为代谢物在环境中的表达和丰富的生物合成基因簇,其中许多在传统的实验室文化中保持沉默。我们还介绍了二十一世纪用于促进这些沉默基因表达并从已知或新菌株中获得新的次级代谢产物的主要策略。这些代谢物中的许多具有与医学相关的生物活性,农业,和生物技术产业,包括针对传染性和非传染性疾病的新药或药物模型的候选人。下面,我们提供了放线菌抗菌谱的重要例子,这是最常见的调查和最著名的,以及它们的非抗菌谱,它变得越来越广为人知,也越来越被探索。
    This brief review aims to draw attention to the biotechnological potential of actinomycetes. Their main uses as sources of antibiotics and in agriculture would be enough not to neglect them; however, as we will see, their biotechnological application is much broader. Far from intending to exhaust this issue, we present a short survey of the research involving actinomycetes and their applications published in the last 23 years. We highlight a perspective for the discovery of new active ingredients or new applications for the known metabolites of these microorganisms that, for approximately 80 years, since the discovery of streptomycin, have been the main source of antibiotics. Based on the collected data, we organize the text to show how the cosmopolitanism of actinomycetes and the evolutionary biotic and abiotic ecological relationships of actinomycetes translate into the expression of metabolites in the environment and the richness of biosynthetic gene clusters, many of which remain silenced in traditional laboratory cultures. We also present the main strategies used in the twenty-first century to promote the expression of these silenced genes and obtain new secondary metabolites from known or new strains. Many of these metabolites have biological activities relevant to medicine, agriculture, and biotechnology industries, including candidates for new drugs or drug models against infectious and non-infectious diseases. Below, we present significant examples of the antimicrobial spectrum of actinomycetes, which is the most commonly investigated and best known, as well as their non-antimicrobial spectrum, which is becoming better known and increasingly explored.
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  • 文章类型: Journal Article
    姬松茸蘑菇是姬松茸科的重要属,属于担子菌类的蘑菇目。其中,双孢蘑菇是大众消费的常见蘑菇,它不仅营养丰富,而且具有显著的药用特性,如抗癌,抗菌,抗氧化剂,和免疫调节特性。稀有的食用蘑菇,姬松茸,含有独特的agaricol化合物,具有明显的抗肝癌活性。蘑菇被认为可以驱风和寒冷,即,风和寒冷的致病因素来自身体,是中药的重要配方。尽管它的营养丰富和突出的药用价值,姬松茸蘑菇尚未进行系统的编译和总结。因此,本综述汇编并分类了过去六十年从蘑菇中提取的70种天然产物。这些化合物表现出不同的生物和药理活性,特别强调抗肿瘤和抗氧化性能。虽然Blazei和Bissporus是这些化合物的主要生产者,对其他蘑菇属次生代谢产物的研究仍然有限。需要进一步的研究来探索和了解蘑菇的抗癌和营养特性。这篇评论有助于理解结构,生物活性,和蘑菇化合物的生物合成途径,并为使用这些蘑菇开发功能食品提供了见解。
    Agaricus mushrooms are an important genus in the Agaricaceae family, belonging to the order Agaricales of the class Basidiomycota. Among them, Agaricus bisporus is a common mushroom for mass consumption, which is not only nutritious but also possesses significant medicinal properties such as anticancer, antibacterial, antioxidant, and immunomodulatory properties. The rare edible mushroom, Agaricus blazei, contains unique agaricol compounds with significant anticancer activity against liver cancer. Agaricus blazei is believed to expel wind and cold, i.e., the pathogenic factors of wind and cold from the body, and is an important formula in traditional Chinese medicine. Despite its nutritional richness and outstanding medicinal value, Agaricus mushrooms have not been systematically compiled and summarized. Therefore, the present review compiles and classifies 70 natural products extracted from Agaricus mushrooms over the past six decades. These compounds exhibit diverse biological and pharmacological activities, with particular emphasis on antitumor and antioxidant properties. While A. blazei and A. bisporus are the primary producers of these compounds, studies on secondary metabolites from other Agaricus species remain limited. Further research is needed to explore and understand the anticancer and nutritional properties of Agaricus mushrooms. This review contributes to the understanding of the structure, bioactivity, and biosynthetic pathways of Agaricus compounds and provides insights for the development of functional foods using these mushrooms.
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  • 文章类型: Journal Article
    丝状真菌菌核青霉在生态和工业领域具有重要意义,因为它提供了大量具有多种生物学功能的次级代谢产物。我们已经收集了与各种结构的硬核假单胞菌代谢产物相关的代谢潜力和生物活性,基于对最新文献的广泛研究。这篇综述纳入了2000年至2023年的文献,来自包括谷歌学者在内的知名数据库,ScienceDirect,Scopus,和PubMed,在其他人中。从氮杂比隆开始,类固醇,聚酮化合物,和肽组表现出迷人的潜在药理活性,如抗菌,抗炎,和抗肿瘤作用,在制药和工业部门有希望。此外,菌核菌通过生产酶如β-木糖苷酶展示了生物技术潜力,β-d-葡萄糖苷酶,和木聚糖酶,在各种工业过程中至关重要。这篇综述强调需要进一步探索其遗传基础和培养条件,以优化有价值的化合物和酶的产量,强调了菌核菌在不同行业应用中尚未开发的潜力。
    The filamentous fungus Penicillium sclerotiorum is significant in ecological and industrial domains due to its vast supply of secondary metabolites that have a diverse array of biological functions. We have gathered the metabolic potential and biological activities associated with P. sclerotiorum metabolites of various structures, based on extensive research of the latest literature. The review incorporated literature spanning from 2000 to 2023, drawing from reputable databases including Google Scholar, ScienceDirect, Scopus, and PubMed, among others. Ranging from azaphilones, meroterpenoids, polyketides, and peptides group exhibits fascinating potential pharmacological activities such as antimicrobial, anti-inflammatory, and antitumor effects, holding promise in pharmaceutical and industrial sectors. Additionally, P. sclerotiorum showcases biotechnological potential through the production of enzymes like β-xylosidases, β-d-glucosidase, and xylanases, pivotal in various industrial processes. This review underscores the need for further exploration into its genetic foundations and cultivation conditions to optimize the yield of valuable compounds and enzymes, highlighting the unexplored potential of P. sclerotiorum in diverse applications across industries.
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  • 文章类型: Journal Article
    种间相互作用是生态学研究的核心。植物产生有毒的植物次生代谢产物(PSM),作为抵抗草食动物过度放牧的防御机制,促使他们逐渐适应有毒物质以耐受或解毒。食草动物肝脏中的P450酶与PSM结合,而UDP-葡糖醛酸基转移酶和谷胱甘肽S-转移酶增加结合PSM的疏水性以进行解毒。肠道微生物如拟杆菌代谢纤维素酶和其他大分子以分解有毒成分。然而,解毒是动物身体的整体反应,需要在各种器官之间进行协调以解毒摄入的PSM。PSM通过肝脏和肠道微生物群进行解毒代谢,胆汁酸的信号过程增加,炎症信号分子,和芳烃受体。在这种情况下,我们对草食动物的肝脏和肠道微生物群的代谢产物如何有助于增强代谢PSMs进行了简要概述。我们主要致力于阐明肝脏和肠道微生物群之间涉及内分泌的分子通讯,免疫,和解毒中的代谢过程。我们还讨论了食草动物肠道未来改变的潜力,以增强肝脏的代谢作用并增强PSM的解毒和代谢能力。
    Interspecific interactions are central to ecological research. Plants produce toxic plant secondary metabolites (PSMs) as a defense mechanism against herbivore overgrazing, prompting their gradual adaptation to toxic substances for tolerance or detoxification. P450 enzymes in herbivore livers bind to PSMs, whereas UDP-glucuronosyltransferase and glutathione S-transferase increase the hydrophobicity of the bound PSMs for detoxification. Intestinal microorganisms such as Bacteroidetes metabolize cellulase and other macromolecules to break down toxic components. However, detoxification is an overall response of the animal body, necessitating coordination among various organs to detoxify ingested PSMs. PSMs undergo detoxification metabolism through the liver and gut microbiota, evidenced by increased signaling processes of bile acids, inflammatory signaling molecules, and aromatic hydrocarbon receptors. In this context, we offer a succinct overview of how metabolites from the liver and gut microbiota of herbivores contribute to enhancing metabolic PSMs. We focused mainly on elucidating the molecular communication between the liver and gut microbiota involving endocrine, immune, and metabolic processes in detoxification. We have also discussed the potential for future alterations in the gut of herbivores to enhance the metabolic effects of the liver and boost the detoxification and metabolic abilities of PSMs.
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  • 文章类型: Journal Article
    抗生素的异常和随意使用导致了抗生素耐药性的发展,这对人类文明来说是一个奇怪的挑战。这种对微生物病原体的抗生素耐药性的新兴危机正在警告所有对人类健康构成全球威胁的国家。很难治疗细菌感染,因为它们对所有抗微生物剂耐药性都产生耐药性。目前使用的抗菌剂抑制细菌中多种必需的代谢途径,包括大分子合成(MMS)途径(例如蛋白质,DNA,RNA,细胞壁)通常通过靶向特定的酶或亚细胞成分,例如DNA促旋酶,RNA聚合酶,核糖体,转肽酶。尽管有各种各样的合成分子,在管理进行性和严重的抗菌素耐药性方面仍然存在许多并发症.目前甚至没有单一的抗微生物剂可用于微生物对其不显示抗性。因此,缺乏有效的药物分子来对抗微生物耐药性,需要不断的研究努力来克服多药耐药细菌的问题。来自各种植物的植物化学物质具有对抗细菌产生的微生物抗性的潜力,真菌,不会产生任何副作用的原生动物和病毒。这篇综述是一项共同努力,旨在从各种药用植物中鉴定一些主要的活性植物成分,这些成分可能有可能被用作对抗微生物抗性的替代和有效策略,并可以促进MDR治疗的研究。
    Aberrant and haphazard use of antibiotics has created the development of antimicrobial resistance which is a bizarre challenge for human civilization. This emerging crisis of antibiotic resistance for microbial pathogens is alarming all the nations posing a global threat to human health. It is difficult to treat bacterial infections as they develop resistance to all antimicrobial resistance. Currently used antibacterial agents inhibit a variety of essential metabolic pathways in bacteria, including macro-molecular synthesis (MMS) pathways (e.g. protein, DNA, RNA, cell wall) most often by targeting a specific enzyme or subcellular component e.g. DNA gyrase, RNA polymerase, ribosomes, transpeptidase. Despite the availability of diverse synthetic molecules, there are still many complications in managing progressive and severe antimicrobial resistance. Currently not even a single antimicrobial agent is available for which the microbes do not show resistance. Thus, the lack of efficient drug molecules for combating microbial resistance requires continuous research efforts to overcome the problem of multidrug-resistant bacteria. The phytochemicals from various plants have the potential to combat the microbial resistance produced by bacteria, fungi, protozoa and viruses without producing any side effects. This review is a concerted effort to identify some of the major active phytoconstituents from various medicinal plants which might have the potential to be used as an alternative and effective strategy to fight against microbial resistance and can promote research for the treatment of MDR.
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  • 文章类型: Journal Article
    细胞色素P450(也称为CYP或P450)是含血红素单加氧酶的超家族。它们分布在所有生物王国中。大多数真菌至少有两个P450编码基因,CYP51和CYP61,是在甾醇类合成中起重要作用的管家基因。然而,王国真菌是许多P450的有趣来源。这里,我们回顾了有关真菌P450及其在化学物质的生物转化和生物合成中的应用的报道。我们强调他们的历史,可用性,和多功能性。我们描述了它们参与羟基化,脱烷基化,氧合,C=C环氧化,C-C裂解,C-C环的形成和膨胀,C-C环收缩,以及生物转化和/或生物合成途径中不常见的反应。P450催化这些反应的能力使它们有希望用于许多应用的酶。因此,我们还讨论了该领域的未来前景。我们希望这篇综述能促进真菌P450在特定反应和应用中的进一步研究和开发。
    Cytochrome P450s (also called CYPs or P450s) are a superfamily of heme-containing monooxygenases. They are distributed in all biological kingdoms. Most fungi have at least two P450-encoding genes, CYP51 and CYP61, which are housekeeping genes that play important roles in the synthesis of sterols. However, the kingdom fungi is an interesting source of numerous P450s. Here, we review reports on fungal P450s and their applications in the bioconversion and biosynthesis of chemicals. We highlight their history, availability, and versatility. We describe their involvement in hydroxylation, dealkylation, oxygenation, C═C epoxidation, C-C cleavage, C-C ring formation and expansion, C-C ring contraction, and uncommon reactions in bioconversion and/or biosynthesis pathways. The ability of P450s to catalyze these reactions makes them promising enzymes for many applications. Thus, we also discuss future prospects in this field. We hope that this review will stimulate further study and exploitation of fungal P450s for specific reactions and applications.
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  • 文章类型: Journal Article
    翻译后修饰(PTM)对于蛋白质功能很重要,并调节真菌中的多个细胞过程和次级代谢产物(SMs)。曲霉属属以丰富的生物活性次级代谢产物而闻名,许多重要的毒素,制药和工业生产。次级代谢物所需的基因通常共定位在生物合成基因簇(BGC)中,它们通常位于基因组的异色区域,在实验室条件下被“关闭”。已经努力通过组蛋白修饰的遗传操作来“打开”这些BGC,可以将异色结构转化为常染色质。此外,非组蛋白PTMs也在次生代谢的调节中发挥关键作用。在这次审查中,我们整理了表观遗传和PTM对曲霉SM生产的已知作用。我们还总结了用于PTM鉴定和预测的蛋白质组学方法和生物信息学工具,并提供了关于PTM在曲霉和其他真菌中SM生物合成调控中的新兴作用的未来观点。
    Post-translational modifications (PTMs) are important for protein function and regulate multiple cellular processes and secondary metabolites (SMs) in fungi. Aspergillus species belong to a genus renown for an abundance of bioactive secondary metabolites, many important as toxins, pharmaceuticals and in industrial production. The genes required for secondary metabolites are typically co-localized in biosynthetic gene clusters (BGCs), which often localize in heterochromatic regions of genome and are \'turned off\' under laboratory condition. Efforts have been made to \'turn on\' these BGCs by genetic manipulation of histone modifications, which could convert the heterochromatic structure to euchromatin. Additionally, non-histone PTMs also play critical roles in the regulation of secondary metabolism. In this review, we collate the known roles of epigenetic and PTMs on Aspergillus SM production. We also summarize the proteomics approaches and bioinformatics tools for PTM identification and prediction and provide future perspectives on the emerging roles of PTM on regulation of SM biosynthesis in Aspergillus and other fungi.
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  • 文章类型: Journal Article
    羽衣甘蓝(甘蓝变种。acephalaDC)是一种流行的十字花科蔬菜,起源于中亚,并以其丰富的生物活性化合物而闻名。这篇综述讨论了羽衣甘蓝的主要植物化学物质,并强调了营养保健的分子,包括酚类物质,类胡萝卜素,和芥子油苷.根据最近的体外研究,羽衣甘蓝对慢性和退行性疾病的预防和治疗特性得到了强调,在体内,和临床研究报告。同样,众所周知,控制非生物胁迫的应用可以用作增加具有健康促进特性的植物化学物质含量的有效工具。在这种情况下,不同非生物胁迫的影响(盐水,外源植物激素,干旱,温度,和辐射)还介绍了羽衣甘蓝中次生代谢物的积累。本文回顾的信息可作为起点,通过生物测定进一步验证异常应激羽衣甘蓝对预防和治疗慢性和退行性疾病的影响。
    Kale (Brassica oleracea L. var. acephala DC) is a popular cruciferous vegetable originating from Central Asia, and is well known for its abundant bioactive compounds. This review discusses the main kale phytochemicals and emphasizes molecules of nutraceutical interest, including phenolics, carotenoids, and glucosinolates. The preventive and therapeutic properties of kale against chronic and degenerative diseases are highlighted according to the most recent in vitro, in vivo, and clinical studies reported. Likewise, it is well known that the application of controlled abiotic stresses can be used as an effective tool to increase the content of phytochemicals with health-promoting properties. In this context, the effect of different abiotic stresses (saline, exogenous phytohormones, drought, temperature, and radiation) on the accumulation of secondary metabolites in kale is also presented. The information reviewed in this article can be used as a starting point to further validate through bioassays the effects of abiotically stressed kale on the prevention and treatment of chronic and degenerative diseases.
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  • 文章类型: Journal Article
    苦参被认为是豆科最著名的属之一,和第三大开花植物家族。苦参属大约有52种,19个品种,和7种形式,在亚洲和非洲广泛分布。槐属物种被认为是广谱生物持久性次生代谢产物的重要来源,即类黄酮,异黄酮,查尔酮,色原,翼果,香豆素,苯并呋喃衍生物,固醇,皂苷(主要是三萜苷),低聚苯乙烯,主要是生物碱。同时,从苦参中提取的提取物和分离的化合物已被确定具有几种健康有希望的作用,包括抗炎,抗关节炎,抗血小板,退烧药,抗癌,抗病毒,抗菌,抗氧化剂,抗骨质疏松,抗溃疡性结肠炎,抗糖尿病药,抗肥胖,止泻药,和杀虫活动。在这里,本综述旨在提供有关苦豆科植物化学物质和生物效应的全面细节。该评论重点介绍了从苦参中提取的有前途的植物营养素及其过多的生物活性。该审查还澄清了剩余的差距,从而为进一步研究这些化合物提供了一个平台。
    Sophora is deemed as one of the most remarkable genera of Fabaceae, and the third largest family of flowering plants. The genus Sophora comprises approximately 52 species, 19 varieties, and 7 forms that are widely distributed in Asia and mildly in Africa. Sophora species are recognized to be substantial sources of broad spectrum biopertinent secondary metabolites namely flavonoids, isoflavonoids, chalcones, chromones, pterocarpans, coumarins, benzofuran derivatives, sterols, saponins (mainly triterpene glycosides), oligostilbenes, and mainly alkaloids. Meanwhile, extracts and isolated compounds from Sophora have been identified to possess several health-promising effects including anti-inflammatory, anti-arthritic, antiplatelets, antipyretic, anticancer, antiviral, antimicrobial, antioxidant, anti-osteoporosis, anti-ulcerative colitis, antidiabetic, anti-obesity, antidiarrheal, and insecticidal activities. Herein, the present review aims to provide comprehensive details about the phytochemicals and biological effects of Sophora species. The review spotlighted on the promising phytonutrients extracted from Sophora and their plethora of bioactivities. The review also clarifies the remaining gaps and thus qualifies and supplies a platform for further investigations of these compounds.
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  • 文章类型: Journal Article
    Yellowing is a critical issue that reduces quality and commodity value of rice. This article presents an overview on rice yellowing and the mechanism of rice yellowing was addressed as the emphasis. The change of physicochemical and nutritive properties in yellowed rice depends on the exposure temperature and time, as well as rice cultivar. The temperature and moisture on rice yellowing were dominant. There is no consensus on the relationship between microorganisms and rice yellowing. The occurrence of yellowing is mainly associated with heat stress induced by heaping heat or respiration of grain, and the yellowing is the collective result of primary and secondary metabolism. The upregulation of flavonoids is the direct cause of rice yellowing, which can be used as metabolic markers of rice yellowing. The Maillard reaction also contributes to yellowing during storage. Aeration and cooling are recommended to lessen the occurring of rice yellowing during commercial storage.
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