Outcome prediction

结果预测
  • 文章类型: Journal Article
    基于数据的个体认知行为疗法(CBT)治疗反应的预测是迈向精准医学的基本步骤。过去的研究表明,当使用临床常规数据(如人口统计学和问卷调查数据)时,只有中等的预测准确性(即区分给定治疗的应答者和非应答者的能力)。而神经影像学数据取得了较高的预测精度。然而,由于非常有限的样本量和容易偏倚的方法,这些研究可能存在相当大的偏倚.充分的动力和交叉验证的样本是评估预测性能和确定最有希望的预测因子的先决条件。因此,我们分析了来自两个大型临床试验的静息状态功能磁共振成像(rs-fMRI)数据,以测试功能神经成像数据是否在更大的样本中继续提供良好的预测准确性。数据来自两项不同的德国多中心研究,涉及基于暴露的焦虑障碍CBT,Protect-AD和SpiderVR研究。我们分别和独立地预处理来自n=220患者(Protect-AD)和n=190患者(SpiderVR)的基线rs-fMRI数据,并提取各种特征,包括ROI到ROI和边缘功能连接,滑动窗口,和图形度量。将这些功能包括在复杂的机器学习管道中,我们发现对个体结果的预测从未与机会水平有显著差异,即使在进行一系列探索性事后分析时。此外,静息状态数据从未提供超过社会人口统计学和临床数据的预测准确性.在选择处理用于预测输入的静息状态数据的方法以及机器学习管道的使用参数方面,这些分析彼此独立。证实了结果的外部有效性。两项独立研究中的类似发现,单独分析,对于基于小样本神经影像学数据的有希望的预测结果的解释,我们要谨慎,并强调以前研究的一些预测准确性可能是由于同质数据和弱交叉验证方案导致的高估。静息状态神经影像学数据在预测焦虑症患者的CBT治疗结果中发挥重要作用的前景仍有待实现。
    Data-based predictions of individual Cognitive Behavioral Therapy (CBT) treatment response are a fundamental step towards precision medicine. Past studies demonstrated only moderate prediction accuracy (i.e. ability to discriminate between responders and non-responders of a given treatment) when using clinical routine data such as demographic and questionnaire data, while neuroimaging data achieved superior prediction accuracy. However, these studies may be considerably biased due to very limited sample sizes and bias-prone methodology. Adequately powered and cross-validated samples are a prerequisite to evaluate predictive performance and to identify the most promising predictors. We therefore analyzed resting state functional magnet resonance imaging (rs-fMRI) data from two large clinical trials to test whether functional neuroimaging data continues to provide good prediction accuracy in much larger samples. Data came from two distinct German multicenter studies on exposure-based CBT for anxiety disorders, the Protect-AD and SpiderVR studies. We separately and independently preprocessed baseline rs-fMRI data from n = 220 patients (Protect-AD) and n = 190 patients (SpiderVR) and extracted a variety of features, including ROI-to-ROI and edge-functional connectivity, sliding-windows, and graph measures. Including these features in sophisticated machine learning pipelines, we found that predictions of individual outcomes never significantly differed from chance level, even when conducting a range of exploratory post-hoc analyses. Moreover, resting state data never provided prediction accuracy beyond the sociodemographic and clinical data. The analyses were independent of each other in terms of selecting methods to process resting state data for prediction input as well as in the used parameters of the machine learning pipelines, corroborating the external validity of the results. These similar findings in two independent studies, analyzed separately, urge caution regarding the interpretation of promising prediction results based on neuroimaging data from small samples and emphasizes that some of the prediction accuracies from previous studies may result from overestimation due to homogeneous data and weak cross-validation schemes. The promise of resting-state neuroimaging data to play an important role in the prediction of CBT treatment outcomes in patients with anxiety disorders remains yet to be delivered.
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  • 文章类型: Randomized Controlled Trial
    目的:已使用挪威膝关节韧带注册(NKLR)数据开发了基于机器学习的前交叉韧带(ACL)翻修预测模型,但缺乏斯堪的纳维亚半岛以外的外部验证。本研究旨在评估NKLR模型(https://swastvedt。shinyapps.io/calculator_rev/)使用稳定性1随机临床试验(RCT)数据集。假设是模型性能相似。
    方法:选择NKLRCoxLasso模型进行外部验证,因为其在原始研究中表现优异。包括具有CoxLasso模型所需的所有五个预测因子的患者。稳定性1RCT是一项前瞻性研究,该研究将患者随机分配为单独接受绳肌腱自体移植(HT)或接受HT加外侧关节外肌腱固定术(LET)。由于稳定性1试验中的所有患者都接受了HT±LET,测试了三种配置:1:所有编码为HT的患者,2:HT+LET组编码为骨-髌腱-骨(BPTB)自体移植,3:HT+LET组编码为未知/其他移植物选择。通过一致性和校准评估模型性能。
    结果:总计,591/618(95.6%)患者符合纳入标准,39人在两年内进行修订(6.6%)。当接受HT+LET的患者被编码为BPTB时,模型性能最好。一致性与1年和2年修正预测的原始NKLR预测模型相似(稳定性:0.71;NKLR:0.68-0.69)。一致性95%置信区间(CI)为0.63~0.79。该模型已很好地校准了1年预测,而2年预测显示出校准错误的证据。
    结论:当接受HT+LET的稳定性1患者在NKLR预测模型中被编码为BPTB时,一致性与指数研究相似。然而,由于95%CI较宽,该加拿大和欧洲队列的预测模型的真实情况尚不清楚,需要更大的数据集来确定外部有效性.Further,1年预测的更好校准与更长时期的一般预测建模挑战相一致。当应用于北美患者时,虽然没有足够大的样本量来引出预测模型的真实准确性和外部有效性,该分析为HT加LET与BPTB重建相似的观点提供了更多支持。此外,尽管置信区间很宽,这项研究表明,当在斯堪的纳维亚半岛以外应用时,人们对该模型的准确性持乐观态度。
    方法:第3级,队列研究。
    OBJECTIVE: A machine learning-based anterior cruciate ligament (ACL) revision prediction model has been developed using Norwegian Knee Ligament Register (NKLR) data, but lacks external validation outside Scandinavia. This study aimed to assess the external validity of the NKLR model (https://swastvedt.shinyapps.io/calculator_rev/) using the STABILITY 1 randomized clinical trial (RCT) data set. The hypothesis was that model performance would be similar.
    METHODS: The NKLR Cox Lasso model was selected for external validation owing to its superior performance in the original study. STABILITY 1 patients with all five predictors required by the Cox Lasso model were included. The STABILITY 1 RCT was a prospective study which randomized patients to receive either a hamstring tendon autograft (HT) alone or HT plus a lateral extra-articular tenodesis (LET). Since all patients in the STABILITY 1 trial received HT ± LET, three configurations were tested: 1: all patients coded as HT, 2: HT + LET group coded as bone-patellar tendon-bone (BPTB) autograft, 3: HT + LET group coded as unknown/other graft choice. Model performance was assessed via concordance and calibration.
    RESULTS: In total, 591/618 (95.6%) STABILITY 1 patients were eligible for inclusion, with 39 undergoing revisions within 2 years (6.6%). Model performance was best when patients receiving HT + LET were coded as BPTB. Concordance was similar to the original NKLR prediction model for 1- and 2-year revision prediction (STABILITY: 0.71; NKLR: 0.68-0.69). Concordance 95% confidence interval (CI) ranged from 0.63 to 0.79. The model was well calibrated for 1-year prediction while the 2-year prediction demonstrated evidence of miscalibration.
    CONCLUSIONS: When patients in STABILITY 1 who received HT + LET were coded as BPTB in the NKLR prediction model, concordance was similar to the index study. However, due to a wide 95% CI, the true performance of the prediction model with this Canadian and European cohort is unclear and a larger data set is required to definitively determine the external validity. Further, better calibration for 1-year predictions aligns with general prediction modelling challenges over longer periods. While not a large enough sample size to elicit the true accuracy and external validity of the prediction model when applied to North American patients, this analysis provides more support for the notion that HT plus LET performs similarly to BPTB reconstruction. In addition, despite the wide confidence interval, this study suggests optimism regarding the accuracy of the model when applied outside of Scandinavia.
    METHODS: Level 3, cohort study.
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  • 文章类型: Journal Article
    目的:使用机器学习(ML)预测局部晚期肺癌接受常规分割或轻度低分割质子束治疗(PBT)12个月内≥2级肺炎或呼吸困难的概率。
    方法:分析了12个机构中965例接受常规分割或轻度低分割(2.2-3Gy/fx)PBT治疗的连续肺癌患者的人口统计学和治疗特征。三种ML模型(梯度提升,加法树,和Lasso正则化逻辑回归)使用双10倍交叉验证进行参数超调而不泄漏信息,以预测CTCAEv.4级≥2级肺毒性。计算平衡准确度(BA)和曲线下面积(AUC)。使用自举采样获得95%置信区间。
    结果:中位年龄为70岁(范围:20-97),主要患有IIIA或IIIB期疾病。他们以2Gy/分数接受60Gy的中位剂量,46.4%接受同步化疗。总的来说,250例(25.9%)肺毒性≥2级。在使用笔形束扫描(PBS)治疗的患者中,肺毒性的可能性为0.08,在使用其他技术治疗的患者中,肺毒性的可能性为0.34(p=8.97e-13)。使用腹部压迫和屏气也是毒性较低的高度显著预测因子(p=2.88e-08)。较高的总放射剂量(p=0.0182)和较高的同侧肺平均剂量增加了肺毒性的可能性(p=0.0035)。梯度提升在所有测试的模型中表现最好,当人口统计学和剂量学特征相结合时,AUC和BA分别为0.75±0.02和0.67±0.02。在分析了性能与用于训练的数据点数量之后,我们观察到,准确性仍然受到观察次数的限制.
    结论:在迄今为止最大的前瞻性肺癌患者评估质子治疗肺毒性的分析中,先进的机器学习方法已经确定PBS,腹部压迫,正常肺剂量较低会导致发生≥2级肺炎或呼吸困难的概率明显降低。
    OBJECTIVE: This study aimed to predict the probability of grade ≥2 pneumonitis or dyspnea within 12 months of receiving conventionally fractionated or mildly hypofractionated proton beam therapy for locally advanced lung cancer using machine learning.
    METHODS: Demographic and treatment characteristics were analyzed for 965 consecutive patients treated for lung cancer with conventionally fractionated or mildly hypofractionated (2.2-3 Gy/fraction) proton beam therapy across 12 institutions. Three machine learning models (gradient boosting, additive tree, and logistic regression with lasso regularization) were implemented to predict Common Terminology Criteria for Adverse Events version 4 grade ≥2 pulmonary toxicities using double 10-fold cross-validation for parameter hyper-tuning without leak of information. Balanced accuracy and area under the curve were calculated, and 95% confidence intervals were obtained using bootstrap sampling.
    RESULTS: The median age of the patients was 70 years (range, 20-97), and they had predominantly stage IIIA or IIIB disease. They received a median dose of 60 Gy in 2 Gy/fraction, and 46.4% received concurrent chemotherapy. In total, 250 (25.9%) had grade ≥2 pulmonary toxicity. The probability of pulmonary toxicity was 0.08 for patients treated with pencil beam scanning and 0.34 for those treated with other techniques (P = 8.97e-13). Use of abdominal compression and breath hold were highly significant predictors of less toxicity (P = 2.88e-08). Higher total radiation delivered dose (P = .0182) and higher average dose to the ipsilateral lung (P = .0035) increased the likelihood of pulmonary toxicities. The gradient boosting model performed the best of the models tested, and when demographic and dosimetric features were combined, the area under the curve and balanced accuracy were 0.75 ± 0.02 and 0.67 ± 0.02, respectively. After analyzing performance versus the number of data points used for training, we observed that accuracy was limited by the number of observations.
    CONCLUSIONS: In the largest analysis of prospectively enrolled patients with lung cancer assessing pulmonary toxicities from proton therapy to date, advanced machine learning methods revealed that pencil beam scanning, abdominal compression, and lower normal lung doses can lead to significantly lower probability of developing grade ≥2 pneumonitis or dyspnea.
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  • 文章类型: Journal Article
    背景:院外心脏骤停(OHCA)是一种具有多种起源和预后的异质实体。很早,可靠的预后评估有助于适应治疗策略,量身定制的护理强度,并通知亲戚。我们的主要目的是进行一项前瞻性多中心研究,以评估心脏骤停预后(CAHP)评分的预测性能,与OHCA(Utstein风格标准)后系统收集的历史数据集进行比较。我们的次要目的是评估OHCA后预测结果的其他专用分数,并将其与Utstein风格标准进行比较。
    方法:我们在2020年8月至2022年6月期间从24个法国和比利时重症监护病房(ICU)收集了数据。纳入所有非创伤性OHCA(心脏和非心脏原因)患者,其在ICU入院时自发循环稳定恢复(ROSC)和昏迷(由格拉斯哥昏迷评分≤8定义)。主要结果是心脏骤停后第90天的改良Rankin量表(mRS),通过电话采访评估。广泛的发达分数(CAHP,OHCA,CREST,C-Graph,TTM,CAST,NULL-PLEASE,和MIRACLE2)被包括在内,以及它们在OHCA(定义为mRS≥4)后90天预测不良结局的准确性是使用接收工作特征曲线(AUROC)下面积和校准带确定的.
    结果:在研究期间,907名患者进行了筛查,658例纳入研究.患者主要为男性(72%),平均年龄为61±15岁,大多数人由于假定的心脏原因而崩溃(64%)。第90天的死亡率为63%,神经系统不良结局为66%。Utstein不良结局预测标准的表现(AUROC)为0.79[0.76-0.83],而其他评分的AUROC从0.79[0.75-0.83]到0.88[0.86-0.91]不等。对于每个分数,无法计算个体值的患者比例从1.4%到17.4%不等.
    结论:在OHCA成功复苏后进入ICU的患者中,大多数可用于评估后续预后的评分比通常的Utstein标准更有效,但其中一些评分的校正是不可接受的.我们的结果表明,一些分数(CAHP,sCAHP,mCAHP,OHCA,RCAST)具有优越的性能,他们的轻松和决心的速度应该鼓励他们的使用。试用注册https://clinicaltrials.gov/ct2/show/NCT04167891。
    BACKGROUND: Out-of-hospital cardiac arrest (OHCA) is a heterogeneous entity with multiple origins and prognoses. An early, reliable assessment of the prognosis is useful to adapt therapeutic strategy, tailor intensity of care, and inform relatives. We aimed primarily to undertake a prospective multicentric study to evaluate predictive performance of the Cardiac Arrest Prognosis (CAHP) Score as compare to historical dataset systematically collected after OHCA (Utstein style criteria). Our secondary aim was to evaluate other dedicated scores for predicting outcome after OHCA and to compare them to Utstein style criteria.
    METHODS: We prospectively collected data from 24 French and Belgium Intensive Care Units (ICUs) between August 2020 and June 2022. All cases of non-traumatic OHCA (cardiac and non-cardiac causes) patients with stable return of spontaneous circulation (ROSC) and comatose at ICU admission (defined by Glasgow coma score ≤ 8) on ICU admission were included. The primary outcome was the modified Rankin scale (mRS) at day 90 after cardiac arrest, assessed by phone interviews. A wide range of developed scores (CAHP, OHCA, CREST, C-Graph, TTM, CAST, NULL-PLEASE, and MIRACLE2) were included, and their accuracies in predicting poor outcome at 90 days after OHCA (defined as mRS ≥ 4) were determined using the area under the receiving operating characteristic curve (AUROC) and the calibration belt.
    RESULTS: During the study period, 907 patients were screened, and 658 were included in the study. Patients were predominantly male (72%), with a mean age of 61 ± 15, most having collapsed from a supposed cardiac cause (64%). The mortality rate at day 90 was 63% and unfavorable neurological outcomes were observed in 66%. The performance (AUROC) of Utstein criteria for poor outcome prediction was moderate at 0.79 [0.76-0.83], whereas AUROCs from other scores varied from 0.79 [0.75-0.83] to 0.88 [0.86-0.91]. For each score, the proportion of patients for whom individual values could not be calculated varied from 1.4% to 17.4%.
    CONCLUSIONS: In patients admitted to ICUs after a successfully resuscitated OHCA, most of the scores available for the evaluation of the subsequent prognosis are more efficient than the usual Utstein criteria but calibration is unacceptable for some of them. Our results show that some scores (CAHP, sCAHP, mCAHP, OHCA, rCAST) have superior performance, and that their ease and speed of determination should encourage their use. Trial registration https://clinicaltrials.gov/ct2/show/NCT04167891.
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  • 文章类型: Journal Article
    本研究假设监测院外心脏骤停(OHCA)患者的心电图(ECG)波形可能对生存或神经系统结局具有预测价值。我们旨在基于使用机器学习(ML)技术监测OHCA患者ECG波形的单个变量,建立新的预测模型。
    这项观察性回顾性研究纳入了2010年4月至2020年4月期间在日本接受重症监护病房治疗的18岁以上OHCA患者成功复苏。从病历中获得入院后1小时的ECG监测波形并进行检查。基于开放存取PTB-XL数据集,一个大型公开可用的12导联心电图波形数据集,我们构建了支持ML的预模型,将监测心电图的II导联波形转换为诊断标签.使用ML支持的另一个模型分析了本研究中患者的ECG诊断标签的预后。终点是良好的神经系统结局(脑功能类别1或2)和出院后的生存率。
    总共,590名OHCA患者被纳入本研究,并随机分为3组(训练集,n=283;验证集,n=70;和测试集,n=237)。在测试集中,我们的ML模型预测了神经和生存结果,接收器工作特性曲线下的最高面积为0.688(95%CI:0.682-0.694)和0.684(95%CI:0.680-0.689),分别。
    我们的ML预测模型表明,在复苏后不久监测ECG波形可以预测OHCA患者的神经和生存结果。
    UNASSIGNED: This study hypothesized that monitoring electrocardiogram (ECG) waveforms in patients with out-of-hospital cardiac arrest (OHCA) could have predictive value for survival or neurological outcomes. We aimed to establish a new prognostication model based on the single variable of monitoring ECG waveforms in patients with OHCA using machine learning (ML) techniques.
    UNASSIGNED: This observational retrospective study included successfully resuscitated patients with OHCA aged ≥ 18 years admitted to an intensive care unit in Japan between April 2010 and April 2020. Waveforms from ECG monitoring for 1 h after admission were obtained from medical records and examined. Based on the open-access PTB-XL dataset, a large publicly available 12-lead ECG waveform dataset, we built an ML-supported premodel that transformed the II-lead waveforms of the monitoring ECG into diagnostic labels. The ECG diagnostic labels of the patients in this study were analyzed for prognosis using another model supported by ML. The endpoints were favorable neurological outcomes (cerebral performance category 1 or 2) and survival to hospital discharge.
    UNASSIGNED: In total, 590 patients with OHCA were included in this study and randomly divided into 3 groups (training set, n = 283; validation set, n = 70; and test set, n = 237). In the test set, our ML model predicted neurological and survival outcomes, with the highest areas under the receiver operating characteristic curves of 0.688 (95% CI: 0.682-0.694) and 0.684 (95% CI: 0.680-0.689), respectively.
    UNASSIGNED: Our ML predictive model showed that monitoring ECG waveforms soon after resuscitation could predict neurological and survival outcomes in patients with OHCA.
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  • 文章类型: Journal Article
    (1)背景:通过使用2D灌注血管造影(2DPA)时间对比剂(CA)浓度模型评估脑灌注来预测动脉瘤性蛛网膜下腔出血(aSAH)和迟发性脑缺血(DCI)患者的临床结局。(2)方法:获取n=26名受试者的数字减影血管造影(DSA)数据集,并在三个时间点使用时间浓度模型对对比密度的变化进行后处理:(i)SAH的初始表现(T0);(ii)血管痉挛相关的急性临床损害(T1);(iii)直接在SAH相关的大血管痉挛(LVV)的血管内治疗(T2)后,得到n=78个数据集。最大斜率(MS,SI/ms),峰值时间(TTP,单位为毫秒),使用感兴趣区域(ROI)在脑实质中测量CA推注(dSI)的最大振幅。首先,获得的参数被标准化为动脉输入功能(AIF),然后作为平均值进行统计学分析.此外,数据分为两个子集,包括血管内治疗后有症状或有稳定/有症状(或多普勒信号)的患者(n=10vs.n=16)。(3)结果:灌注参数(MS,TTP,和dSI)在T0和T1之间存在显着差异(每个p=0.003)。T1和T2之间的显着变化仅在MS中可检测到(0.041±0.016vs.0.059±0.026;p=0.011)在T2时出现复发症状的患者(0.04±0.012vs.0.066±0.031;p=0.004)。对于dSI,T0和T2之间存在显着差异(5095.8±2541.9vs.3012.3±968.3;p=0.001),特别是对于那些在T2时症状稳定的人(5685.4±2967.2vs.3102.8±1033.2;p=0.02)。多元线性回归分析显示,a)T1和T2之间MS的差异以及b)患者年龄(R=0.6;R2=0.34;p=0.009)强烈预测出院时改良的Rankin量表(mRS)。(4)结论:2DPA可以直接测量SAH相关DCI的治疗效果,并可用于预测这些危重患者的预后。
    (1) Background: To predict clinical outcomes in patients with aneurysmal subarachnoid hemorrhage (aSAH) and delayed cerebral ischemia (DCI) by assessment of the cerebral perfusion using a 2D perfusion angiography (2DPA) time-contrast agent (CA) concentration model. (2) Methods: Digital subtraction angiography (DSA) data sets of n = 26 subjects were acquired and post-processed focusing on changes in contrast density using a time-concentration model at three time points: (i) initial presentation with SAH (T0); (ii) vasospasm-associated acute clinical impairment (T1); and (iii) directly after endovascular treatment (T2) of SAH-associated large vessel vasospasm (LVV), which resulted in n = 78 data sets. Maximum slope (MS in SI/ms), time-to-peak (TTP in ms), and maximum amplitude of a CA bolus (dSI) were measured in brain parenchyma using regions of interest (ROIs). First, acquired parameters were standardized to the arterial input function (AIF) and then statistically analyzed as mean values. Additionally, data were clustered into two subsets consisting of patients with regredient or with stable/progredient symptoms (or Doppler signals) after endovascular treatment (n = 10 vs. n = 16). (3) Results: Perfusion parameters (MS, TTP, and dSI) differed significantly between T0 and T1 (p = 0.003 each). Significant changes between T1 and T2 were only detectable for MS (0.041 ± 0.016 vs. 0.059 ± 0.026; p = 0.011) in patients with regredient symptoms at T2 (0.04 ± 0.012 vs. 0.066 ± 0.031; p = 0.004). For dSI, there were significant differences between T0 and T2 (5095.8 ± 2541.9 vs. 3012.3 ± 968.3; p = 0.001), especially for those with stable symptoms at T2 (5685.4 ± 2967.2 vs. 3102.8 ± 1033.2; p = 0.02). Multiple linear regression analysis revealed that a) the difference in MS between T1 and T2 and b) patient\'s age (R = 0.6; R2 = 0.34; p = 0.009) strongly predict the modified Rankin Scale (mRS) at discharge. (4) Conclusions: 2DPA allows the direct measurement of treatment effects in SAH associated DCI and may be used to predict outcomes in these critically ill patients.
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  • 文章类型: Journal Article
    脑脊液鼻漏(CSFR)是经鼻颅底手术后的常见并发症,一种治疗垂体腺瘤和许多其他颅底肿瘤的基础技术。CRANIAL研究探讨了CSFR发生率和相关危险因素,特别是颅底修复技术,通过多中心前瞻性观察研究。我们试图使用机器学习来利用这个复杂的多中心数据集进行CSFR预测和风险因素分析。
    865例数据集-725经蝶入路(TSA)和140扩大鼻内入路(EEA)-以脑脊液鼻漏为主要结果,被使用。从数据中提取相关变量,预测变量分为两类,术前危险因素;和修复技术,分别有6个和11个变量。为了预测CSFR,开发了三种类型的机器学习模型:逻辑回归(LR);决策树(DT);和神经网络(NN)。使用5倍交叉验证对模型进行了验证,通过曲线下面积(AUC)评估指标进行比较,并使用Shapley加性解释(SHAP)评分确定关键预测变量。
    经蝶入路的CSFR率为3.9%(28/725),经鼻入路的CSFR率为7.1%(10/140)。神经网络在CSFR预测方面优于LR和DT,TSA的平均AUC为0.80(0.70-0.90),EEA为0.78(0.60-0.96),将所有危险因素和术中修复数据整合到模型中。术中脑脊液漏的存在是CSFR最突出的危险因素。BMI升高和翻修手术也与经蝶入路的CSFR相关。CSF分流和垫片密封似乎是两种方法均不存在CSFR的有力预测因素。
    神经网络可有效预测经鼻颅底手术后患者的CSFR并发现关键的CSFR预测因子,优于传统的统计方法。这些模型将通过更大,更精细的数据集进一步改进,改进的NN架构,和外部验证。在未来,此类预测模型可用于辅助手术决策和支持更个性化的患者咨询.
    UNASSIGNED: Cerebrospinal fluid rhinorrhoea (CSFR) is a common complication following endonasal skull base surgery, a technique that is fundamental to the treatment of pituitary adenomas and many other skull base tumours. The CRANIAL study explored CSFR incidence and related risk factors, particularly skull base repair techniques, via a multicentre prospective observational study. We sought to use machine learning to leverage this complex multicentre dataset for CSFR prediction and risk factor analysis.
    UNASSIGNED: A dataset of 865 cases - 725 transsphenoidal approach (TSA) and 140 expanded endonasal approach (EEA) - with cerebrospinal fluid rhinorrhoea as the primary outcome, was used. Relevant variables were extracted from the data, and prediction variables were divided into two categories, preoperative risk factors; and repair techniques, with 6 and 11 variables respectively. Three types of machine learning models were developed in order to predict CSFR: logistic regression (LR); decision tree (DT); and neural network (NN). Models were validated using 5-fold cross-validation, compared via their area under the curve (AUC) evaluation metric, and key prediction variables were identified using their Shapley additive explanations (SHAP) score.
    UNASSIGNED: CSFR rates were 3.9% (28/725) for the transsphenoidal approach and 7.1% (10/140) for the expanded endonasal approach. NNs outperformed LR and DT for CSFR prediction, with a mean AUC of 0.80 (0.70-0.90) for TSA and 0.78 (0.60-0.96) for EEA, when all risk factor and intraoperative repair data were integrated into the model. The presence of intraoperative CSF leak was the most prominent risk factor for CSFR. Elevated BMI and revision surgery were also associated with CSFR for the transsphenoidal approach. CSF diversion and gasket sealing appear to be strong predictors of the absence of CSFR for both approaches.
    UNASSIGNED: Neural networks are effective at predicting CSFR and uncovering key CSFR predictors in patients following endonasal skull base surgery, outperforming traditional statistical methods. These models will be improved further with larger and more granular datasets, improved NN architecture, and external validation. In the future, such predictive models could be used to assist surgical decision-making and support more individualised patient counselling.
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  • 文章类型: Clinical Trial
    虚拟临床试验(VCT)可以在计算机上模拟临床试验,但由于对统计人群的估计存在偏差,因此在有限数量的过去临床病例中应用它们具有挑战性.在这项研究中,我们开发了ExMixup,一种基于机器学习的新型训练技术,使用迭代重新分配的外推数据。从100例前列腺癌患者和385例口咽癌患者获得的信息用于预测放疗后的复发。通过基于三种训练方法开发结果预测模型来评估模型性能:使用原始数据(基线)进行训练,插值数据(Mixup),和插值+外推数据(ExMixup)。与从风险分类或癌症阶段分类的患者队列获得的训练数据相比,进行了两种类型的VCT来预测具有不同特征的患者的治疗反应。使用ExMixup开发的预测模型在前列腺癌和口鼻咽癌数据集上的VCTs产生了0.751(0.719-0.818)和0.752(0.734-0.785)的一致性指数(95%置信区间)。分别,显著优于基线模型和Mixup模型(P<0.01)。所提出的方法可以增强VCT预测从过去的临床试验中排除的患者的治疗结果的能力。
    Virtual clinical trials (VCTs) can potentially simulate clinical trials on a computer, but their application with a limited number of past clinical cases is challenging due to the biased estimation of the statistical population. In this study, we developed ExMixup, a novel training technique based on machine learning, using iteratively redistributed extrapolated data. Information obtained from 100 patients with prostate cancer and 385 patients with oropharyngeal cancer was used to predict the recurrence after radiotherapy. Model performance was evaluated by developing outcome prediction models based on three types of training methods: training with original data (baseline), interpolation data (Mixup), and interpolation + extrapolation data (ExMixup). Two types of VCTs were conducted to predict the treatment response of patients with distinct characteristics compared to the training data obtained from patient cohorts categorized under risk classification or cancer stage. The prediction models developed with ExMixup yielded concordance indices (95% confidence intervals) of 0.751 (0.719-0.818) and 0.752 (0.734-0.785) for VCTs on the prostate and oropharyngeal cancer datasets, respectively, which significantly outperformed the baseline and Mixup models (P < 0.01). The proposed approach could enhance the ability of VCTs to predict treatment results in patients excluded from past clinical trials.
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  • 文章类型: Journal Article
    未经授权:尽管碳离子放疗(CIRT)可以改善局部复发鼻咽癌(LR-NPC)患者的预后,局部进展仍然是主要的失败模式之一。这表明对用于预测再照射后疾病控制和潜在指导定制治疗的标志物的需求尚未满足。本研究的目的是探讨治疗前3'-脱氧-3'-[18F]氟胸苷(FLT)-正电子发射断层扫描(PET)对局部晚期LR-NPC患者的预测价值。
    未经评估:在此回顾性分析中,LR-NPC患者局部晚期(III/IV期),在6月之间接受治疗前FLT-PET,2015年8月,2017年,回顾性回顾并纳入本研究。使用Kaplan-Meier方法计算OS和局部无进展生存期(LPFS)。对LPFS进行单变量和多变量Cox回归分析。FLT派生参数,包括SUVmax,代谢性肿瘤体积(MTV),检查总病变胸苷(TLT)。通过Wilcoxon检验测试了FLT衍生参数与粘膜坏死之间的关系。
    UNASSIGNED:本分析共纳入27例患者,中位随访时间为31.3个月。2年OS和LPFS率分别为85.2%和47.9%,分别。在多变量分析中,除TLT-40%(P=0.059)外,所有治疗前MTV(MTV-40%P=0.040;MTV-50%P=0.021;MTV-60%P=0.026)和TLT(TLT-50%P=0.043;TLT-60%P=0.048)均与LPFS显著相关.此外,具有各种边界的MTV和TLT(MTV-40%除外)也与CIRT后粘膜坏死的发展有关。
    未经评估:在当前的研究中,在局部晚期LR-NPC患者中观察到治疗前FLT-PET和LPFS之间存在显著关联.需要进一步的研究来证实FLT-PET的预测作用。
    UNASSIGNED: Although carbon-ion radiotherapy (CIRT) may improve outcome for patients with locoregionally recurrent nasopharyngeal carcinoma (LR-NPC), local progression still remains one of the major failure patterns. This suggests an unmet need of markers for predicting disease control after re-irradiation and potentially guiding tailored treatment. The purpose of this study was to explore the predictive value of pre-treatment 3\'-deoxy-3\'-[18F]fluorothymidine (FLT)-positron emission tomography (PET) for patients with locally advanced LR-NPC.
    UNASSIGNED: In this retrospective analysis, LR-NPC patients with locally advanced stage (stage III/IV) who received pre-treatment FLT-PET between June, 2015, and August, 2017, were retrospective reviewed and included in this study. OS and local progression-free survival (LPFS) were calculated using the Kaplan-Meier method. Univariable and multivariable Cox regression analyses of LPFS were performed. FLT-derived parameters, including SUVmax, metabolic tumor volume (MTV), and total lesion thymidine (TLT) were examined. The relationship between FLT-derived parameters and mucosal necrosis was tested by the Wilcoxon test.
    UNASSIGNED: A total of 27 patients with a median follow-up of 31.3 months were included in this analysis. The 2-year OS and LPFS rates were 85.2% and 47.9%, respectively. In multivariable analysis, except for TLT-40% (P=0.059), all pre-treatment MTVs (P=0.040 for MTV-40%; P=0.021 for MTV-50%; P=0.026 for MTV-60%) and TLTs (P=0.043 for TLT-50%; P=0.048 for TLT-60%) were significantly related to LPFS. Moreover, MTVs and TLTs with various boundaries (except for MTV-40%) were also associated with the development of mucosal necrosis after CIRT.
    UNASSIGNED: In the current study, a significant association between pre-treatment FLT-PET and LPFS was observed in patients with locally advanced LR-NPC. Further investigations are warranted to confirm the predictive role of FLT-PET.
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  • 文章类型: Journal Article
    背景:意识障碍(DoC)是严重的神经系统疾病,其中意识受到不同程度的损害。它们是由调节唤醒和意识的神经系统损伤或功能障碍引起的。在过去的几十年里,在改善和个性化受DoC影响的患者的诊断和预后准确性方面已经做出了重大努力,主要是引入多模态评估来补充行为检查。目前由欧盟资助的多中心研究项目“PerBrain”旨在为DoC患者开发一种由行为和多模式神经诊断指导的个性化诊断分级途径。
    方法:在这个项目中,每个登记的患者都经历重复的行为,临床,根据患者定制的多层工作流程进行神经诊断评估。在患者临床发展的不同阶段使用最先进的技术进行多模态诊断采集。应用的技术包括完善的行为尺度,创新的神经生理学技术(如定量脑电图和经颅磁刺激结合脑电图),结构和静息状态功能磁共振成像,和生理活动的测量(即鼻气流呼吸)。此外,调查了患者非正式照顾者(主要是家庭成员)的幸福感和治疗决策态度。在获得性脑损伤后一年内的多个时间点进行患者和护理人员评估,从急性疾病阶段开始。
    结论:DoC的准确分类和结果预测对受影响的患者及其护理人员至关重要,因为个人康复策略和治疗决策严重依赖于后者。PerBrain项目旨在通过将来自建议的多模态检查方法的数据整合到个性化的分级诊断和预后程序中来优化个体DoC诊断和结果预测的准确性。使用并行跟踪患者的神经状态和他们的照顾者的精神状态,幸福,从疾病的急性期到慢性期以及不同国家的治疗决策态度,该项目旨在为DoC患者及其家庭成员的当前临床常规做出重大贡献。
    背景:ClinicalTrials.gov,NCT04798456。2021年3月15日注册-回顾性注册。
    BACKGROUND: Disorders of consciousness (DoC) are severe neurological conditions in which consciousness is impaired to various degrees. They are caused by injury or malfunction of neural systems regulating arousal and awareness. Over the last decades, major efforts in improving and individualizing diagnostic and prognostic accuracy for patients affected by DoC have been made, mainly focusing on introducing multimodal assessments to complement behavioral examination. The present EU-funded multicentric research project \"PerBrain\" is aimed at developing an individualized diagnostic hierarchical pathway guided by both behavior and multimodal neurodiagnostics for DoC patients.
    METHODS: In this project, each enrolled patient undergoes repetitive behavioral, clinical, and neurodiagnostic assessments according to a patient-tailored multi-layer workflow. Multimodal diagnostic acquisitions using state-of-the-art techniques at different stages of the patients\' clinical evolution are performed. The techniques applied comprise well-established behavioral scales, innovative neurophysiological techniques (such as quantitative electroencephalography and transcranial magnetic stimulation combined with electroencephalography), structural and resting-state functional magnetic resonance imaging, and measurements of physiological activity (i.e. nasal airflow respiration). In addition, the well-being and treatment decision attitudes of patients\' informal caregivers (primarily family members) are investigated. Patient and caregiver assessments are performed at multiple time points within one year after acquired brain injury, starting at the acute disease phase.
    CONCLUSIONS: Accurate classification and outcome prediction of DoC are of crucial importance for affected patients as well as their caregivers, as individual rehabilitation strategies and treatment decisions are critically dependent on the latter. The PerBrain project aims at optimizing individual DoC diagnosis and accuracy of outcome prediction by integrating data from the suggested multimodal examination methods into a personalized hierarchical diagnosis and prognosis procedure. Using the parallel tracking of both patients\' neurological status and their caregivers\' mental situation, well-being, and treatment decision attitudes from the acute to the chronic phase of the disease and across different countries, this project aims at significantly contributing to the current clinical routine of DoC patients and their family members.
    BACKGROUND: ClinicalTrials.gov, NCT04798456 . Registered 15 March 2021 - Retrospectively registered.
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