Histone

Histone
  • 文章类型: Systematic Review
    人们越来越认识到右心室(RV)在确定多种疾病的功能状态和预后中的关键作用。在过去的十年里,表观遗传调控(DNA甲基化,组蛋白修饰,和非编码RNA)的基因表达已被认为是RV发育的关键决定因素,RV生理功能,和RV病理性功能障碍。因此,我们的目标是对文献进行最新的回顾,收集与RV功能/功能障碍相关的表观遗传修饰的知识。因此,我们对评估表观遗传修饰对RV发育和/或RV功能障碍进展的贡献的研究进行了系统回顾,而不考虑病因病理学.在PubMed上发表的英语文学,在研究开始至2023年1月1日之间进行了评估。两位作者在提取研究结果之前独立评估了研究是否符合资格标准。在筛选的817项研究中,109项研究纳入本综述,包括使用人类样本的69个(例如,RV心肌,血)。虽然37提出了一种基于表观遗传的治疗干预来改善RV功能,没有一项涉及临床试验,70项是描述性的.令人惊讶的是,我们观察到研究相同表观遗传修饰对RV功能或发育的表达(上调或下调)和/或贡献的研究之间存在显著差异.这篇详尽的文献综述总结了在人类或临床前环境中针对RV的相关表观遗传学研究。
    There is an increasing recognition of the crucial role of the right ventricle (RV) in determining the functional status and prognosis in multiple conditions. In the past decade, the epigenetic regulation (DNA methylation, histone modification, and non-coding RNAs) of gene expression has been raised as a critical determinant of RV development, RV physiological function, and RV pathological dysfunction. We thus aimed to perform an up-to-date review of the literature, gathering knowledge on the epigenetic modifications associated with RV function/dysfunction. Therefore, we conducted a systematic review of studies assessing the contribution of epigenetic modifications to RV development and/or the progression of RV dysfunction regardless of the causal pathology. English literature published on PubMed, between the inception of the study and 1 January 2023, was evaluated. Two authors independently evaluated whether studies met eligibility criteria before study results were extracted. Amongst the 817 studies screened, 109 studies were included in this review, including 69 that used human samples (e.g., RV myocardium, blood). While 37 proposed an epigenetic-based therapeutic intervention to improve RV function, none involved a clinical trial and 70 are descriptive. Surprisingly, we observed a substantial discrepancy between studies investigating the expression (up or down) and/or the contribution of the same epigenetic modifications on RV function or development. This exhaustive review of the literature summarizes the relevant epigenetic studies focusing on RV in human or preclinical setting.
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  • 文章类型: Journal Article
    背景:在成人文献中,组蛋白抗体与系统性红斑狼疮(SLE)和药物诱导的狼疮(DILE)相关。关于针对组蛋白的抗体在儿科人群中涵盖的病理学谱的数据很少。先前的研究表明与SLE有关,幼年特发性关节炎(JIA),葡萄膜炎和线状硬皮病。
    方法:回顾了连续三年内抗组蛋白抗体检测阳性的患者图表。患者诊断以及存在:抗组蛋白抗体滴度,安娜,以及其他SSA自身抗体的存在,SSB,Sm,RNP,获得dsDNA和染色质。SLE的频率,在特定的亚群中进一步研究了JIA和DILE。
    结果:回顾了139个包含41种不同诊断的单独图表。最常见的诊断是活动过度关节痛,有22例患者。最常见的风湿病诊断是JIA(非全身性),有19。这项研究中的13例患者被诊断为SLE,2例被诊断为DILE。18例患者有其他自身抗体产生,其中,11患有SLE或DILE。62例抗组蛋白抗体滴度(1.0-1.5)弱的患者中只有1例被诊断为SLE。当存在强滴度(>2.5)时,抗组蛋白抗体检测与基础风湿病的发病率超过50%相关,SLE的发病率是滴度弱的10倍.关于SLE的频率,弱滴度和中度滴度之间以及弱滴度和强滴度之间存在统计学上的显着差异。
    结论:在儿科人群的多种诊断中观察到抗组蛋白抗体的存在。总的来说,抗组蛋白抗体的存在似乎对任何特定疾病的诊断效用都较差.然而,SLE的诊断实用程序似乎随着更高的滴度而提高,当与其他自身抗体阳性。效价强度似乎不是JIA的一个因素,但却是本研究中最常见的风湿性疾病。
    BACKGROUND: Antibodies to histone have been associated in the adult literature with systemic lupus erythematosus(SLE) and drug induced lupus(DILE). Little data is available regarding the spectrum of pathology that antibodies to histone encompass in the pediatric population. Prior studies suggest an association with SLE, juvenile idiopathic arthritis(JIA), uveitis and linear scleroderma.
    METHODS: Patient charts were reviewed that contained positive anti-histone antibody testing during a consecutive three year period. Patient diagnosis along with the presence of: anti-histone antibody titer, ANA, and the presence of other autoantibodies to SSA, SSB, Sm, RNP, dsDNA and chromatin were obtained. The frequency of SLE, JIA and DILE was further investigated in specific subsets.
    RESULTS: 139 individual charts were reviewed containing 41 different diagnoses. The most common diagnosis was hypermobility arthralgia with 22 patients. The most frequent rheumatologic diagnosis was JIA(nonsystemic) with 19. 13 patients in this study were diagnosed with SLE and 2 with DILE. 18 patients had other autoantibody production, of these, 11 had SLE or DILE. Only one of 62 patients with a weak antihistone antibody titer(1.0-1.5) was diagnosed with SLE. When strong titers are present(> 2.5), the antihistone antibody test was associated with a greater than 50% incidence of an underlying rheumatologic disease and ten times higher incidence of SLE than a weak titer. In regards to the frequency of SLE, there was a statistically significant difference between weak and moderate titers and between weak and strong titers.
    CONCLUSIONS: The presence of anti-histone antibody was observed in a variety of diagnoses in the pediatric population. Overall, the presence of anti-histone antibodies appears to have poor diagnostic utility for any specific condition. However, diagnostic utility for SLE does appear to improve with higher titers, when combined with other autoantibody positivity. Strength of titer did not appear to be a factor for JIA, but was the most frequently observed rheumatologic disease in this study.
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  • 文章类型: Meta-Analysis
    SARS-CoV-2感染的特征是全身和器官血栓过度炎症,临床病程从轻度到严重的全身功能障碍和死亡。在2019年冠状病毒病(COVID-19)患者中,单核细胞/巨噬细胞群作为触发因子和靶标深度参与,假设先天细胞免疫的有用诊断/预后标志物的价值。多项研究将循环单核细胞的形态学和免疫表型改变与COVID-19患者的临床结果相关联,结论单核细胞分布宽度(MDW)可能在分层疾病恶化的风险方面保留临床价值。通过Medline和Scopus的电子搜索,我们进行了最新的文献综述和荟萃分析,旨在探讨COVID-19患者MDW水平升高与疾病严重程度之间的关系,破译在SARS-CoV-2感染的有害网络中单核细胞的作用和功能。我们发现,MDW值显着升高经常出现在出现不利临床结局的COVID-19患者中,单核细胞异细胞增多和SARS-CoV-2结局之间存在显著关联。这些发现表明,血液MDW指数及其散点图可以代表有用的常规实验室工具,用于早期识别处于不利的COVID-19风险较高的患者并监测病毒感染的进展,临床结果,和整个住院期间的治疗效果。根据这个证据,SARS-CoV-2感染患者的治疗决策可能受益于监测MDW值,在患有严重/危重COVID-19疾病的患者中使用限制单核细胞过度激活引起的血栓炎症的药物。
    The SARS-CoV-2 infection is characterized by both systemic and organ hyper-thromboinflammation, with a clinical course ranging from mild up-to critical systemic dysfunction and death. In patients with coronavirus disease 2019 (COVID-19) the monocyte/macrophage population is deeply involved as both trigger and target, assuming the value of useful diagnostic/prognostic marker of innate cellular immunity. Several studies correlated morphological and immunophenotypic alterations of circulating monocytes with clinical outcomes in COVID-19 patients, concluding that monocyte distribution width (MDW) may retain clinical value in stratifying the risk of disease worsening. Through an electronic search in Medline and Scopus we performed an updated literature review and meta-analysis aimed to explore the association between increased MDW levels and illness severity in COVID-19 patients, deciphering role(s) and function(s) of monocytes in the harmful network underlining SARS-CoV-2 infection. We found that significantly elevated MDW values were frequently present in COVID-19 patients who developed unfavorable clinical outcomes, compounded by a significant association between monocyte anisocytosis and SARS-CoV-2 outcomes. These findings suggest that blood MDW index and its scatter plot could represent useful routine laboratory tools for early identification of patients at higher risk of unfavorable COVID-19 and for monitoring the progression of viral infection, clinical outcomes, and therapeutic efficacy throughout hospitalization. According to this evidence, therapeutic decisions in patients with SARS-CoV-2 infection could benefit from monitoring MDW value, with administration of drugs limiting thrombo-inflammation due to monocyte hyper-activation in patients with severe/critical COVID-19 disease.
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  • 文章类型: Journal Article
    蛋白质精氨酸甲基转移酶5(PRMT5)抑制剂是一类新型的抗肿瘤药物,具有良好的临床疗效。靶向参与广泛的细胞和转录前致癌过程的酶,这个类提供了多方面的肿瘤抑制作用。在GSK3326595和JNJ-64619178的腺样囊性癌中都看到了部分反应,在PRT543中发现了4例稳定的疾病。在PRT811的异柠檬酸脱氢酶1突变的多形性胶质母细胞瘤中,持久的完全反应非常重要。无论是单独还是与现有的化学疗法和免疫疗法相结合,这个类显示了有希望的初步数据,特别是在具有剪接突变和DNA损伤修复缺陷的癌症中。需要进一步的研究,还有临床试验,其数据将说明PRMT5抑制剂在血液系统和实体恶性肿瘤中的疗效。这项研究的目的是汇编PRMT5抑制剂在肿瘤学临床试验中的可用结果。
    Protein arginine methyltransferase 5 (PRMT5) inhibitors are a new class of antineoplastic agents showing promising preliminary clinical efficacy. Targeting an enzyme involved in a wide array of cellular and transcriptional pro-oncogenic processes, this class offers multifaceted tumor-suppressive effects. Partial response has been seen in adenoid cystic carcinoma from both GSK3326595 and JNJ-64619178, with four cases of stable disease seen with PRT543. Highly significant is a durable complete response in isocitrate dehydrogenase 1-mutated glioblastoma multiforme with PRT811. Both alone and in combination with existing chemotherapies and immunotherapies, this class shows promising preliminary data, particularly in cancers with splicing mutations and DNA damage repair deficiencies. Further studies are warranted, and there are clinical trials to come whose data will be telling of the efficacy of PRMT5 inhibitors in both hematologic and solid malignancies. The aim of this study is to compile available results of PRMT5 inhibitors in oncology clinical trials.
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  • 文章类型: Journal Article
    已显示与环境或职业暴露相对应的浓度的草甘膦可诱导可能参与致癌作用的表观遗传变化。这种物质(1)改变了各种细胞类型和生物体中的整体甲基化,并负责单个基因的不同启动子的甲基化,例如人PBMC中的TP53和P21,(2)大鼠H3K27me3甲基化和H3乙酰化降低,H3K9甲基化和H4乙酰化增加,(3)增加人PBMCs中P16、P21、CCND1的表达,和EGR1,JUN,FOS,和MYC在HEK293细胞中,但降低人PBMC中TP53的表达,(4)参与染色质结构的基因DNMT1、HDAC3、TET1、TET2、TET3的表达变化,例如在日本鱼肉中,(5)改变各种小的表达,单股,参与基因表达转录后调控的非编码RNA分子,例如MCF10A细胞中的miRNA182-5p,miR-30和miR-10在哺乳动物干细胞中的表达,以及几十种鼠miRNA。由草甘膦引起的表观遗传变化可以随着时间的推移而持续,并且可以在下一代中传递给后代;在第三代中,它们可以导致一些疾病的发展,如前列腺疾病或肥胖。一些表观遗传机制表明,由于暴露于草甘膦,人类患乳腺癌的潜在风险。应该强调的是,大多数报告的表观遗传变化尚未与最终的代谢作用相关。这可能取决于许多其他因素。
    Glyphosate in the concentrations corresponding to environmental or occupational exposure has been shown to induce epigenetic changes potentially involved in carcinogenesis. This substance (1) changes the global methylation in various cell types and organisms and is responsible for the methylation of different promoters of individual genes, such as TP53 and P21 in human PBMCs, (2) decreases H3K27me3 methylation and H3 acetylation and increases H3K9 methylation and H4 acetylation in rats, (3) increases the expression of P16, P21, CCND1 in human PBMCs, and the expression of EGR1, JUN, FOS, and MYC in HEK293 cells, but decreases TP53 expression in human PBMCs, (4) changes the expression of genes DNMT1, HDAC3, TET1, TET2, TET3 involved in chromatin architecture, e.g. in fish Japanese medaka, (5) alters the expression of various small, single-stranded, non-coding RNA molecules engaged in post-transcriptional regulation of gene expression, such as miRNA 182-5p in MCF10A cells, miR-30 and miR-10 in mammalian stem cells, as well as several dozen of murine miRNAs. Epigenetic changes caused by glyphosate can persist over time and can be passed on to the offsprings in the next generation; in the third generation they can result in some disorders development, such as prostate disease or obesity. Some epigenetic mechanisms have indicated a potential risk of breast cancer development in human as a result of the exposure to glyphosate. It should be emphasized that the majority of reported epigenetic changes have not yet been associated with the final metabolic effects, which may depend on many other factors.
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  • 文章类型: Journal Article
    传染性呼吸道疾病COVID-19表现出从轻度/中度到严重的全身功能障碍和与血栓炎症相关的死亡的临床过程。在COVID-19感染期间,参与细胞因子风暴和凝血功能障碍的中性粒细胞胞外陷阱已成为诊断/预后标志物.NET的表征确定主要是组蛋白,有可能引发和传播炎症风暴和血栓形成,导致疾病严重程度增加和患者生存率降低。基线评估和连续监测血液组蛋白浓度可能对COVID-19有用。我们进行了文献综述,以探讨组蛋白循环水平增加之间的关联,COVID-19患者的疾病严重程度/死亡率,以及COVID-19和非COVID-19患者组蛋白值的比较。我们在Medline和Scopus进行了电子搜索,使用关键词\"COVID-19\"或\"SARS-CoV-2\"和\"组蛋白\"或\"瓜氨酸化组蛋白\"或\"高组织学血症\",在2019年和现在之间(即,6月07日,2022),允许选择17项研究,共1846个科目。我们发现,在所有出现不利临床结局的COVID-19患者中,组蛋白值一直显著升高。这些结果表明,入院时和整个住院期间的血液组蛋白监测可能有助于早期识别COVID-19不良进展的高风险。基于组蛋白截止值的SARS-CoV-2患者的治疗决策可能是由使用组蛋白的药物驱动的,最终导致细胞毒性的限制,炎症,和循环组蛋白在病毒性败血症中的血栓形成作用。
    The infectious respiratory condition COVID-19 manifests a clinical course ranging from mild/moderate up-to critical systemic dysfunction and death linked to thromboinflammation. During COVID-19 infection, neutrophil extracellular traps participating in cytokine storm and coagulation dysfunction have emerged as diagnostic/prognostic markers. The characterization of NET identified that mainly histones, have the potential to initiate and propagate inflammatory storm and thrombosis, leading to increased disease severity and decreased patient survival. Baseline assessment and serial monitoring of blood histone concentration may be conceivably useful in COVID-19. We performed a literature review to explore the association among increased circulating levels of histones, disease severity/mortality in COVID-19 patients, and comparison of histone values between COVID-19 and non-COVID-19 patients. We carried out an electronic search in Medline and Scopus, using the keywords \"COVID-19\" OR \"SARS-CoV-2\" AND \"histone\" OR \"citrullinated histones\" OR \"hyperhistonemia\", between 2019 and present time (i.e., June 07th, 2022), which allowed to select 17 studies, totaling 1,846 subjects. We found that substantially elevated histone values were consistently present in all COVID-19 patients who developed unfavorable clinical outcomes. These findings suggest that blood histone monitoring upon admission and throughout hospitalization may be useful for early identification of higher risk of unfavorable COVID-19 progression. Therapeutic decisions in patients with SARS-CoV-2 based on the use of histone cut-off values may be driven by drugs engaging histones, finally leading to the limitation of cytotoxic, inflammatory, and thrombotic effects of circulating histones in viral sepsis.
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  • 文章类型: Journal Article
    甲状旁腺肿瘤是内分泌肿瘤中非常普遍的疾病,仅次于甲状腺肿瘤。继发性增生可以发生在甲状旁腺的良性和恶性肿瘤以外。腺瘤是甲状旁腺功能亢进的主要原因,而癌症占病例的不到1%。肿瘤抑制基因突变如MEN1和CDC73被证明与熟悉类型和散发性类型的肿瘤发展有关;然而,甲状旁腺肿瘤的表观遗传特征仍然是一个鲜为人知的话题.我们对与甲状旁腺肿瘤相关的表观遗传机制进行了综述,强调组蛋白修饰的进展及其成为甲状旁腺肿瘤研究中一个有前途的领域的前景。
    Parathyroid tumors are very prevalent conditions among endocrine tumors, being the second most common behind thyroid tumors. Secondary hyperplasia can occur beyond benign and malignant neoplasia in parathyroid glands. Adenomas are the leading cause of hyperparathyroidism, while carcinomas represent less than 1% of the cases. Tumor suppressor gene mutations such as MEN1 and CDC73 were demonstrated to be involved in tumor development in both familiar and sporadic types; however, the epigenetic features of the parathyroid tumors are still a little-explored subject. We present a review of epigenetic mechanisms related to parathyroid tumors, emphasizing advances in histone modification and its perspective of becoming a promising area in parathyroid tumor research.
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  • 文章类型: Journal Article
    真核转录因子(TF)的子集具有将一种细胞类型重编程为另一种细胞类型的能力。对于细胞重编程重要的基因通常位于封闭的染色质中,被核小体覆盖。先锋因子是一类特殊的TFs,可以在接触之前将其目标位点接合在封闭的染色质中,打开,或其他因素对网站的修改。尽管在动物中已知许多先驱因素,一些在植物中具有特征。TFLEAFY(LFY)是指定拟南芥花命运的先驱因子。为了响应内源性和环境线索,植物产生适当的花卉诱导剂(florigens)。在植物生长阶段,LFY被终端花1(TFL1)-FD复合物抑制,作为一种花卉抑制剂,或者反Florigen.florigenen花斑点T(FT)与TFL1竞争以防止FDTF与LFY基因座的结合。所产生的FT-FD复合物用作激活其目标的瞬时刺激。一旦LFY以适当的时空方式转录,LFY与闭合染色质区域中的核小体结合。随后,LFY通过置换H1接头组蛋白并募集SWI/SNF染色质-重塑复合物来打开染色质。这种本地更改允许绑定其他TF,导致花分生组织同一性基因APETALA1的表达。这篇小型评论描述了我们对先驱TFLFY的理解的最新进展,通过植物表观遗传景观的塑造,提供对建立基因表达能力的见解。
    A subset of eukaryotic transcription factors (TFs) possess the ability to reprogram one cell type into another. Genes important for cellular reprograming are typically located in closed chromatin, which is covered by nucleosomes. Pioneer factors are a special class of TFs that can initially engage their target sites in closed chromatin prior to the engagement with, opening of, or modification of the sites by other factors. Although many pioneer factors are known in animals, a few have been characterized in plants. The TF LEAFY (LFY) acts as a pioneer factor specifying floral fate in Arabidopsis. In response to endogenous and environmental cues, plants produce appropriate floral inducers (florigens). During the vegetative phase, LFY is repressed by the TERMINAL FLOWER 1 (TFL1)-FD complex, which functions as a floral inhibitor, or anti-florigen. The florigen FLOWERING LOCUS T (FT) competes with TFL1 to prevent the binding of the FD TF to the LFY locus. The resulting FT-FD complex functions as a transient stimulus to activate its targets. Once LFY has been transcribed in the appropriate spatiotemporal manner, LFY binds to nucleosomes in closed chromatin regions. Subsequently, LFY opens the chromatin by displacing H1 linker histones and recruiting the SWI/SNF chromatin-remodeling complex. Such local changes permit the binding of other TFs, leading to the expression of the floral meristem identity gene APETALA1. This mini-review describes the latest advances in our understanding of the pioneer TF LFY, providing insight into the establishment of gene expression competence through the shaping of the plant epigenetic landscape.
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  • 文章类型: Journal Article
    关于组蛋白的ADP-核糖基化修饰的当前知识,特别是单ADP-核糖基化修饰,是有限的。然而,近年来研究发现越来越多的单ADP-核糖基转移酶,单ADP-核糖基转移酶的作用已成为研究热点。特别是,作为几种单ADP-核糖基转移酶和单ADP-核糖糖基化组蛋白的底物的组蛋白被表明参与许多生理或病理过程。与聚-ADP-核糖基化组蛋白修饰相比,单-ADP-核糖基化组蛋白修饰的使用受到用于研究其在生理或病理过程中的功能的有限方法的限制。本综述的目的是讨论关于组蛋白的单ADP核糖基化修饰及其目前已知的功能的细节,如细胞生理和病理过程,包括肿瘤发生。
    The current knowledge regarding ADP-ribosylation modifications of histones, particularly mono-ADP-ribosylation modifications, is limited. However, recent studies have identified an increasing number of mono-ADP-ribosyltransferases and the role of mono-ADP-ribosylation has become a hot research topic. In particular, histones that are substrates of several mono-ADP-ribosyltransferases and mono-ADP-ribosylated histones were indicated to be involved in numerous physiological or pathological processes. Compared to poly-ADP-ribosylation histone modification, the use of mono-ADP-ribosylation histone modification is restricted by the limited methods for research into its function in physiological or pathological processes. The aim of the present review was to discuss the details regarding mono-ADP-ribosylation modification of histones and the currently known functions thereof, such as cell physiological and pathological processes, including tumorigenesis.
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  • 文章类型: Journal Article
    蛋白质翻译后修饰(PTM)长期以来一直是深入研究的主题。共价添加20个遗传编码的氨基酸可以改变蛋白质相互作用,甚至可以改变酶功能。在尤卡亚,PTM可以放大细胞环境的复杂性和功能范例。因此,PTM已经引起了大量的研究兴趣,既可以理解基本机制,也可以深入了解药物设计。的确,靶向参与写作的蛋白质,阅读,和删除对人类病理重要的PTM是药物发现的一些最富有成果的途径。在这篇多作者评论中,我们探索了有关赖氨酸和精氨酸甲基化的令人兴奋的新工作,对一些赖氨酸和精氨酸甲基转移酶(KMTs和PRMTs,分别),对核酸甲基化的新见解,以及负责编写这些PTM的酶和负责识别这些PTM的读者如何被下药。这里,我们介绍本期的背景和主题。
    Protein post-translational modifications (PTMs) have long been a topic of intensive investigation. Covalent additions to the 20 genetically encoded amino acids can alter protein interactions and can even change enzymatic function. In eukarya, PTMs can amplify both the complexity and functional paradigms of the cellular environment. Therefore, PTMs have been of substantial research interest, both for understanding fundamental mechanisms and to provide insight into drug design. Indeed, targeting proteins involved in writing, reading, and erasing PTMs important for human pathologies are some of the most fruitful avenues of drug discovery. In this multi-author review, we explore exciting new work on lysine and arginine methylation, molecular and structural understanding of some of the lysine and arginine methyltransferases (KMTs and PRMTs, respectively), novel insights into nucleic acid methylation, and how the enzymes responsible for writing these PTMs and readers responsible for recognizing these PTMs could be drugged. Here, we introduce the background and the topics covered in this issue.
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