Heme proteins are known to perform a plethora of biologically important functions. This article reviews work that has been conducted on various class I cytochrome c proteins over a period of nearly 50 years. The article focuses on the relevance of symmetry-lowering heme-protein interactions that affect the function of the electron transfer protein cytochrome c. The article provides an overview of various, mostly spectroscopic studies that explored the electronic structure of the heme group in these proteins and how it is affected by symmetry-lowering deformations. In addition to discussing a large variety of spectroscopic studies, the article provides a theoretical framework that should enable a comprehensive understanding of the physical chemistry that underlies the function not only of cytochrome c but of all heme proteins.

In this review, photoinduced electron transfer processes in specifically designed assembled architectures have been discussed in the light of recent results reported from our laboratories. A convenient and useful way to study these systems is described to understand the rules that drive a light-induced charge-separated states and its subsequent decay to the ground state, also with the aim of offering a tutorial for young researchers. Assembled systems of covalent or supramolecular nature have been presented, and some functional multicomponent systems for the conversion of light energy into chemical energy have been discussed.

In this report we deeply explore the electron rearrangements for a chemical reaction case study of the SN2 type OH- + CH3-CN ↔ HO-CH3 + CN-, within the topological formalism of QTAIM model in its local and the non-local or integrated form implementations. This is part of our main interest of a subtle description of the electron distribution at both, equilibrium and non-equilibrium conformations for the state function at correlated level of approximation. The emphasis is mainly placed on the determination of complex patterns of interaction of two or four electrons in three centers (2e-3c, 4e-3c). These results confirm them as a measure of electron excess or electron deficiency effects and revels their crucial importance in the charge transference process and its relationship with these complex patterns. All electronic magnitudes were followed along the configurations from reactants to products passing through the corresponding transition state TS. The results obtained throughout this case study reveals the high performance of the topological formalism of Bader type in the subtle description of electron rearrangements in a chemical transformation.

Local and non-local topological treatment of electronic distributions are applied to a simple out of equilibrium case of an electron-deficient three-atom cluster, B3+. The bending movement is described in detail through the onset and disappearance of critical points defining two kinds of molecular structures, characterizing a transition state (TS) and predicting two stable equilibrium geometries. All points in this rich evolution and the structural change in the out of equilibrium conformations has been featured and distinguished by the behavior of the population magnitudes and of the paired and unpaired electron densities within the non-local and local points of view of the topological formalism. The unpaired or electron hole density appears as relevant in both versions, the non-local or integrated one, in which it is sometimes called free-valence and also for its complementary counterpart, the local one, to describe and to quantify the interatomic interactions. The stability of the cluster B3+ is characterized in terms of a topologically defined ring structure and the highest total two- and three-center populations, thus showing the role of the geometry, the covalence, and the complex patterns. Consideration of the electron correlation effects constitutes the basement of the results gathered, thus displaying their influence in the formation and breaking of boron bonding interactions.

The antimicrobial properties of two-dimensional materials such as graphene-based surfaces are vital for environmental and biomedical applications. Here, the improvement of the antibacterial property of reduced graphene oxide by the preparation of rGO-CuO nanocomposite films was reported. The rGO-CuO nanocomposites were synthesized via a simple hydrothermal method, and the nanocomposite films were fabricated by filtering through a polytetrafluoroethylene (PTFE) filter with the assistance of a vacuum filtration unit. After characterization of the nanocomposite films, the antibacterial properties were tested against Pseudomonas aeruginosa PAO1. The fabricated rGO-CuO nanocomposite films exhibited excellent antibacterial activity, leading to complete bacterial inactivation upon contact. The antibacterial properties were closely linked to the reactive oxygen species (ROS) independent pathway rather than the ROS-dependent pathway. This work provides an insight into the antibacterial mechanisms of reduced GO and copper oxide composite film for water treatment systems and the potential application of these nanocomposites in biomedicine.

The phenomenon of contact electrification (CE) has been known for thousands of years, but the nature of the charge carriers and their transfer mechanisms are still under debate. Here, the CE and triboelectric charging process are studied for a metal-dielectric case at different thermal conditions by using atomic force microscopy and Kelvin probe force microscopy. The charge transfer process at the nanoscale is found to follow the modified thermionic-emission model. In particular, the focus here is on the effect of a temperature difference between two contacting materials on the CE. It is revealed that hotter solids tend to receive positive triboelectric charges, while cooler solids tend to be negatively charged, which suggests that the temperature-difference-induced charge transfer can be attributed to the thermionic-emission effect, in which the electrons are thermally excited and transfer from a hotter surface to a cooler one. Further, a thermionic-emission band-structure model is proposed to describe the electron transfer between two solids at different temperatures. The findings also suggest that CE can occur between two identical materials owing to the existence of a local temperature difference arising from the nanoscale rubbing of surfaces with different curvatures/roughness.

Surprisingly efficient solid-state electron transport has recently been demonstrated through \"dry\" proteins (with only structural, tightly bound H2O left), suggesting proteins as promising candidates for molecular (bio)electronics. Using inelastic electron tunneling spectroscopy (IETS), we explored electron-phonon interaction in metal/protein/metal junctions, to help understand solid-state electronic transport across the redox protein azurin. To that end an oriented azurin monolayer on Au is contacted by soft Au electrodes. Characteristic vibrational modes of amide and amino acid side groups as well as of the azurin-electrode contact were observed, revealing the azurin native conformation in the junction and the critical role of side groups in the charge transport. The lack of abrupt changes in the conductance and the line shape of IETS point to far off-resonance tunneling as the dominant transport mechanism across azurin, in line with previously reported (and herein confirmed) azurin junctions. The inelastic current and hence electron-phonon interaction appear to be rather weak and comparable in magnitude with the inelastic fraction of tunneling current via alkyl chains, which may reflect the known structural rigidity of azurin.

Nanostructured titanium dioxide (TiO2 ) electrodes, prepared by anodization of titanium, are employed to probe the electron-transfer process of cytochrome b5 (cyt b5 ) by surface-enhanced resonance Raman (SERR) spectroscopy. Concomitant with the increased nanoscopic surface roughness of TiO2 , achieved by raising the anodization voltage from 10 to 20 V, the enhancement factor increases from 2.4 to 8.6, which is rationalized by calculations of the electric field enhancement. Cyt b5 is immobilized on TiO2 under preservation of its native structure but it displays a non-ideal redox behavior due to the limited conductivity of the electrode material. The electron-transfer efficiency which depends on the crystalline phase of TiO2 has to be improved by appropriate doping for applications in bioelectrochemistry.

In this mini review, we briefly survey the molecular processes that lead to reactive oxygen species (ROS) production by the respiratory complex III (CIII or cytochrome bc1). In particular, we discuss the \"forward\" and \"reverse\" electron transfer pathways that lead to superoxide generation at the quinol oxidation (Qo) site of CIII, and the components that affect these reactions. We then describe and compare the properties of a bacterial (Rhodobacter capsulatus) mutant enzyme producing ROS with its mitochondrial (human cybrids) counterpart associated with a disease. The mutation under study is located at a highly conserved tyrosine residue of cytochrome b (Y302C in R. capsulatus and Y278C in human mitochondria) that is at the heart of the quinol oxidation (Qo) site of CIII. Similarities of the major findings of bacterial and human mitochondrial cases, including decreased catalytic activity of CIII, enhanced ROS production and ensuing cellular responses and damages, are remarkable. This case illustrates the usefulness of undertaking parallel and complementary studies using biologically different yet evolutionarily related systems, such as α-proteobacteria and human mitochondria. It progresses our understanding of CIII mechanism of function and ROS production, and underlines the possible importance of supra-molecular organization of bacterial and mitochondrial respiratory chains (i.e., respirasomes) and their potential disease-associated protective roles. This article is part of a Special Issue entitled: Respiratory complex III and related bc complexes.