Brain Mapping

大脑映射
  • 文章类型: Journal Article
    谈话是影响社会的主要手段,但是它对大脑活动的影响仍然未知。以前关于对话和社会影响力的工作强调公众的遵守,很大程度上把私人信仰放在一边。这里,我们表明建立共识的对话可以使未来的大脑活动在群体中保持一致,通过新颖的经验坚持一致,参与者没有讨论。参与者在fMRI扫描期间观看了模糊的电影片段,然后分组交谈,目的是就每个剪辑的叙述达成共识。谈话后,参与者的大脑在再次观看剪辑时被扫描,以及同一部电影的小说片段。达成共识的小组在谈话后显示出更大的大脑活动相似性。被认为具有较高社会地位的参与者说话更多,并表示对他人不信任,他们的小组有不平等的轮流和较低的神经排列。相比之下,在现实世界社交网络中处于中心位置的参与者鼓励其他人发言,促进更大的群体神经对齐。以社会为中心的参与者也更有可能在神经上与小组中的其他人保持一致。
    Conversation is a primary means of social influence, but its effects on brain activity remain unknown. Previous work on conversation and social influence has emphasized public compliance, largely setting private beliefs aside. Here, we show that consensus-building conversation aligns future brain activity within groups, with alignment persisting through novel experiences participants did not discuss. Participants watched ambiguous movie clips during fMRI scanning, then conversed in groups with the goal of coming to a consensus about each clip\'s narrative. After conversation, participants\' brains were scanned while viewing the clips again, along with novel clips from the same movies. Groups that reached consensus showed greater similarity of brain activity after conversation. Participants perceived as having high social status spoke more and signaled disbelief in others, and their groups had unequal turn-taking and lower neural alignment. By contrast, participants with central positions in their real-world social networks encouraged others to speak, facilitating greater group neural alignment. Socially central participants were also more likely to become neurally aligned to others in their groups.
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  • 文章类型: Journal Article
    本文为临床脑研究实施QSM提供了建议。这是国际医学磁共振学会的共识,电磁组织特性研究组。在QSM技术持续快速发展的同时,目前的QSM方法已被证明是可重复和可重复的,可用于生成大脑中的定量组织磁化率图。然而,现有的许多QSM方法在神经影像学界产生了对实施指南的需求.本文概述了QSM数据采集的注意事项和实施建议,processing,分析,和出版。我们建议使用单极3D多回波梯度回波(GRE)序列获取数据,并以医学数字成像和通信(DICOM)格式保存和导出相位图像,并使用精确展开方法展开。多回波图像应在背景场去除之前进行组合,以及使用大脑提取工具创建的大脑掩模,并结合了基于相位质量的掩模。应使用基于SHARP或PDF的技术删除大脑掩模中的背景字段,偶极子反演的优化方法应该采用基于稀疏性的正则化。磁化率值应相对于指定的参考进行测量,包括整个大脑的共同参考区域作为分析中的感兴趣区域。还提供了报告QSM结果所需的最低采集和处理细节。这些建议应促进临床QSM研究并促进统一的数据采集,分析,和报告。
    This article provides recommendations for implementing QSM for clinical brain research. It is a consensus of the International Society of Magnetic Resonance in Medicine, Electro-Magnetic Tissue Properties Study Group. While QSM technical development continues to advance rapidly, the current QSM methods have been demonstrated to be repeatable and reproducible for generating quantitative tissue magnetic susceptibility maps in the brain. However, the many QSM approaches available have generated a need in the neuroimaging community for guidelines on implementation. This article outlines considerations and implementation recommendations for QSM data acquisition, processing, analysis, and publication. We recommend that data be acquired using a monopolar 3D multi-echo gradient echo (GRE) sequence and that phase images be saved and exported in Digital Imaging and Communications in Medicine (DICOM) format and unwrapped using an exact unwrapping approach. Multi-echo images should be combined before background field removal, and a brain mask created using a brain extraction tool with the incorporation of phase-quality-based masking. Background fields within the brain mask should be removed using a technique based on SHARP or PDF, and the optimization approach to dipole inversion should be employed with a sparsity-based regularization. Susceptibility values should be measured relative to a specified reference, including the common reference region of the whole brain as a region of interest in the analysis. The minimum acquisition and processing details required when reporting QSM results are also provided. These recommendations should facilitate clinical QSM research and promote harmonized data acquisition, analysis, and reporting.
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  • 文章类型: Journal Article
    动物模型中的无任务功能连通性提供了一个实验框架来检查受控条件下的连通性现象,并允许与在侵入性或最终程序下收集的数据模态进行比较。目前,动物采集采用不同的方案和分析进行,这妨碍了结果比较和整合。这里我们介绍StandardRat,在20个中心测试了一致的大鼠功能磁共振成像采集方案.为了开发具有优化的采集和处理参数的协议,我们最初汇总了来自46个中心的大鼠的65个功能成像数据集.我们开发了一个可重复的管道,用于分析通过不同协议获取的大鼠数据,并确定了与跨中心功能连接的强大检测相关的实验和处理参数。我们表明,相对于以前的采集,标准化协议增强了生物学上合理的功能连接模式。这里描述的协议和处理管道与神经成像界公开共享,以促进互操作性和合作,以应对神经科学中最重要的挑战。
    Task-free functional connectivity in animal models provides an experimental framework to examine connectivity phenomena under controlled conditions and allows for comparisons with data modalities collected under invasive or terminal procedures. Currently, animal acquisitions are performed with varying protocols and analyses that hamper result comparison and integration. Here we introduce StandardRat, a consensus rat functional magnetic resonance imaging acquisition protocol tested across 20 centers. To develop this protocol with optimized acquisition and processing parameters, we initially aggregated 65 functional imaging datasets acquired from rats across 46 centers. We developed a reproducible pipeline for analyzing rat data acquired with diverse protocols and determined experimental and processing parameters associated with the robust detection of functional connectivity across centers. We show that the standardized protocol enhances biologically plausible functional connectivity patterns relative to previous acquisitions. The protocol and processing pipeline described here is openly shared with the neuroimaging community to promote interoperability and cooperation toward tackling the most important challenges in neuroscience.
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  • 文章类型: Journal Article
    自二十世纪下半叶以来,颅内脑电图(iEEG),包括皮质脑电图(ECoG)和立体脑电图(sEEG),为人类大脑提供了一个亲密的视角。在基础研究和临床之间的接口,iEEG提供了高时间分辨率和高空间特异性,但有限制,如个人定制的电极采样稀疏度。多年来,神经科学的研究人员开发了他们的实践,以充分利用iEEG方法。在这里,我们提供iEEG研究实践的关键审查,在一个新的教学框架,以及解决熟练研究人员遇到的问题。范围有三个方面:(I)回顾iEEG研究中的常见做法,(ii)建议使用iEEG数据的潜在指南,并根据最广泛的实践回答常见问题,和(iii)基于当前的神经生理学知识和方法,为iEEG研究中的良好实践标准铺平道路。本文的组织遵循iEEG数据处理的步骤。第一部分介绍iEEG数据收集。第二部分集中于颅内电极的定位。第三部分重点介绍了主要的预处理步骤。第四部门提出了iEEG旌旗灯号剖析办法。第五部分讨论了统计方法。第六部门对iEEG研讨得出了一些独到的视角。最后,为了确保整个手稿的术语一致,并与其他准则保持一致,例如,脑成像数据结构(BIDS)和OHBM数据分析和共享最佳实践委员会(COBIDAS),我们提供了一个词汇表来消除与iEEG研究相关的术语歧义。
    Since the second-half of the twentieth century, intracranial electroencephalography (iEEG), including both electrocorticography (ECoG) and stereo-electroencephalography (sEEG), has provided an intimate view into the human brain. At the interface between fundamental research and the clinic, iEEG provides both high temporal resolution and high spatial specificity but comes with constraints, such as the individual\'s tailored sparsity of electrode sampling. Over the years, researchers in neuroscience developed their practices to make the most of the iEEG approach. Here we offer a critical review of iEEG research practices in a didactic framework for newcomers, as well addressing issues encountered by proficient researchers. The scope is threefold: (i) review common practices in iEEG research, (ii) suggest potential guidelines for working with iEEG data and answer frequently asked questions based on the most widespread practices, and (iii) based on current neurophysiological knowledge and methodologies, pave the way to good practice standards in iEEG research. The organization of this paper follows the steps of iEEG data processing. The first section contextualizes iEEG data collection. The second section focuses on localization of intracranial electrodes. The third section highlights the main pre-processing steps. The fourth section presents iEEG signal analysis methods. The fifth section discusses statistical approaches. The sixth section draws some unique perspectives on iEEG research. Finally, to ensure a consistent nomenclature throughout the manuscript and to align with other guidelines, e.g., Brain Imaging Data Structure (BIDS) and the OHBM Committee on Best Practices in Data Analysis and Sharing (COBIDAS), we provide a glossary to disambiguate terms related to iEEG research.
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  • 文章类型: Journal Article
    人类学习理论融合了这样一种观点,即一起工作的人比独立工作的人学习得更好。鲜为人知,然而,关于通过合作学习的神经机制。我们通过利用功能性近红外光谱同时记录一组中三合会成员的大脑活动来解决这一研究空白。三合会被指示合作或独立分析一首中国古代诗歌。出现了四个主要发现。首先,我们在左颞叶上皮层观察到显著的组内神经同步(GNS),颈上回,与自主学习相比,合作学习和中央后回。第二,当达成共识时,三合会中GNS的增强被放大(与阐述或论证)在合作学习过程中。第三,GNS可以在早期阶段(学习开始后156-170s)预测学习结果。第四,社会因素,如社会亲密关系(例如,有多少学习者喜欢彼此)反映在GNS中,并与学习参与度共同变化。这些结果为皮亚杰的认知发展理论提供了神经科学支持,并支持通过合作进行成功学习涉及动态共识建立的概念。在一组学习者之间共享的神经模式中捕获。
    Theories of human learning converge on the view that individuals working together learn better than do those working independently. Little is known, however, about the neural mechanisms of learning through cooperation. We addressed this research gap by leveraging functional near-infrared spectroscopy to record the brain activity of triad members in a group simultaneously. Triads were instructed to analyze an ancient Chinese poem either cooperatively or independently. Four main findings emerged. First, we observed significant within-group neural synchronization (GNS) in the left superior temporal cortex, supramarginal gyrus, and postcentral gyrus during cooperative learning compared with independent learning. Second, the enhancement of GNS in triads was amplified when a consensus was reached (vs. elaboration or argument) during cooperative learning. Third, GNS was predictive of learning outcome at an early stage (156-170 s after learning was initiated). Fourth, social factors such as social closeness (e.g. how much learners liked one other) were reflected in GNS and co-varied with learning engagement. These results provide neuroscientific support for Piaget\'s theory of cognitive development and favor the notion that successful learning through cooperation involves dynamic consensus-building, which is captured in neural patterns shared across learners in a group.
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  • 文章类型: Journal Article
    围绕人脑功能网络组织的许多最新发展都集中在跨个体群体平均的数据上。虽然这种群体层面的方法已经为大脑的大规模分布式系统提供了相当大的启示,他们掩盖了网络组织中的个体差异,最近的工作已经证明是普遍和广泛的。这种个体差异在组分析中产生噪音,它们可以将作为参与者之间不同功能系统一部分的区域平均在一起,限制可解释性。然而,成本和可行性限制可能会限制研究中个体水平映射的可能性。在这里,我们的目标是利用有关个人水平的大脑组织的信息来概率映射常见的功能系统,并确定高受试者间共识的位置,以用于组分析。我们在具有相对较高数据量的多个数据集中概率映射了14个功能网络。所有网络都显示“核心”(高概率)区域,但在它们的高变异性成分的程度上彼此不同。这些模式在具有不同参与者和扫描参数的四个数据集上很好地复制。我们从这些概率图产生了一组高概率感兴趣区域(ROI);这些和概率图公开可用,以及用于查询与任何给定皮质位置相关联的网络成员资格概率的工具。这些定量估计和公共工具可以允许研究人员将关于受试者间共识的信息应用于他们自己的功能磁共振成像研究。改进对系统及其功能专业化的推论。
    Many recent developments surrounding the functional network organization of the human brain have focused on data that have been averaged across groups of individuals. While such group-level approaches have shed considerable light on the brain\'s large-scale distributed systems, they conceal individual differences in network organization, which recent work has demonstrated to be common and widespread. This individual variability produces noise in group analyses, which may average together regions that are part of different functional systems across participants, limiting interpretability. However, cost and feasibility constraints may limit the possibility for individual-level mapping within studies. Here our goal was to leverage information about individual-level brain organization to probabilistically map common functional systems and identify locations of high inter-subject consensus for use in group analyses. We probabilistically mapped 14 functional networks in multiple datasets with relatively high amounts of data. All networks show \"core\" (high-probability) regions, but differ from one another in the extent of their higher-variability components. These patterns replicate well across four datasets with different participants and scanning parameters. We produced a set of high-probability regions of interest (ROIs) from these probabilistic maps; these and the probabilistic maps are made publicly available, together with a tool for querying the network membership probabilities associated with any given cortical location. These quantitative estimates and public tools may allow researchers to apply information about inter-subject consensus to their own fMRI studies, improving inferences about systems and their functional specializations.
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  • 文章类型: Journal Article
    Currently, the neuropathological diagnosis of Lewy body disease (LBD) may be stated according to several staging systems, which include the Braak Lewy body stages (Braak), the consensus criteria by McKeith and colleagues (McKeith), the modified McKeith system by Leverenz and colleagues (Leverenz), and the Unified Staging System by Beach and colleagues (Beach). All of these systems use semi-quantitative scoring (4- or 5-tier scales) of Lewy pathology (LP; i.e., Lewy bodies and Lewy neurites) in defined cortical and subcortical areas. While these systems are widely used, some suffer from low inter-rater reliability and/or an inability to unequivocally classify all cases with LP. To address these limitations, we devised a new system, the LP consensus criteria (LPC), which is based on the McKeith system, but applies a dichotomous approach for the scoring of LP (i.e., \"absent\" vs. \"present\") and includes amygdala-predominant and olfactory-only stages. α-Synuclein-stained slides from brainstem, limbic system, neocortex, and olfactory bulb from a total of 34 cases with LP provided by the Newcastle Brain Tissue Resource (NBTR) and the University of Pennsylvania brain bank (UPBB) were scanned and assessed by 16 raters, who provided diagnostic categories for each case according to Braak, McKeith, Leverenz, Beach, and LPC systems. In addition, using LP scores available from neuropathological reports of LP cases from UPBB (n = 202) and NBTR (n = 134), JT (UPBB) and JA (NBTR) assigned categories according to all staging systems to these cases. McKeith, Leverenz, and LPC systems reached good (Krippendorff\'s α ≈ 0.6), while both Braak and Beach systems had lower (Krippendorff\'s α ≈ 0.4) inter-rater reliability, respectively. Using the LPC system, all cases could be unequivocally classified by the majority of raters, which was also seen for 97.1% when the Beach system was used. However, a considerable proportion of cases could not be classified when using Leverenz (11.8%), McKeith (26.5%), or Braak (29.4%) systems. The category of neocortical LP according to the LPC system was associated with a 5.9 OR (p < 0.0001) of dementia in the 134 NBTR cases and a 3.14 OR (p = 0.0001) in the 202 UPBB cases. We established that the LPC system has good reproducibility and allows classification of all cases into distinct categories. We expect that it will be reliable and useful in routine diagnostic practice and, therefore, suggest that it should be the standard future approach for the basic post-mortem evaluation of LP.
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  • 文章类型: Journal Article
    使用视觉诱发场(VEF)来区分健康,来自功能失调的皮质的正常脑功能已被证明是有效和可靠的。目前,VEF广泛用于指导癫痫和脑肿瘤的颅内手术。VEF的未来临床应用有几个可能的领域,包括疾病的早期识别,比如多发性硬化症,帕金森病,中风,和人类免疫缺陷病毒相关的神经认知障碍。这些研究表明,VEF可用于研究疾病的病理生理学或作为早期识别疾病的生物标志物。美国临床脑磁图学会VEF的当前临床实践指南是足够的。此时,VEF应在临床上用于识别视觉皮层并可能定制手术切除。
    Using visual evoked fields (VEFs) to differentiate healthy, normal brain function from dysfunctional cortex has been demonstrated to be both valid and reliable. Currently, VEFs are widely implemented to guide intracranial surgeries for epilepsy and brain tumors. There are several areas of possible future clinical use of VEFs, including early identification of disorders, such as multiple sclerosis, Parkinson\'s disease, stroke, and human immunodeficiency virus-associated neurocognitive disorders. These studies have suggested that VEFs could be used to study disease pathophysiology or as a biomarker for early identification of a disorder. The current clinical practice guidelines of the American Clinical Magnetoencephalography Society for VEFs are sufficient. At this time, VEFs should be used clinically to identify visual cortex and potentially tailor surgical resections.
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  • 文章类型: Journal Article
    Auditory evoked fields (AEFs) are well suited for studies of auditory processing in patients. Their sources have been localized to Heschl\'s gyri and to the supratemporal auditory cortices. Auditory evoked fields are known to be modulated by peripheral and central lesions of auditory pathways and to reflect group-level pathophysiology of neurodevelopmental and psychiatric disorders. They are useful in lateralization of language processes for planning neurosurgery and for localization of language-related cortex. The recently developed artifact rejection and movement compensation methods will enhance and extend the use of AEFs in studies of clinical patients and pediatric groups. New pediatric magnetoencephalography systems will facilitate clinical AEF studies of developmental disorders. In addition to their established use in planning neurosurgery, AEF findings in several new clinical patient groups suffering, e.g., from developmental, neurodegenerative, or psychiatric disorders have been reported. Several recent investigations report the correlations with clinical symptoms and sensitivity and specificity profiles of AEFs in studies of these disorders; this development is mandatory in gaining wider clinical approval for the use of AEFs in clinical practice dealing with individual patients. Most promising future research lines of clinical applicability of AEFs focus on developmental and psychiatric disorders.
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  • 文章类型: Journal Article
    In this article, we present the clinical indications and advances in the use of magnetoencephalography to map the primary sensorimotor (SM1) cortex in neurosurgical patients noninvasively. We emphasize the advantages of magnetoencephalography over sensorimotor mapping using functional magnetic resonance imaging. Recommendations to the referring physicians and the clinical magnetoencephalographers to achieve appropriate sensorimotor cortex mapping using magnetoencephalography are proposed. We finally provide some practical advice for the use of corticomuscular coherence, cortico-kinematic coherence, and mu rhythm suppression in this indication. Magnetoencephalography should now be considered as a method of reference for presurgical functional mapping of the sensorimotor cortex.
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