• 文章类型: Journal Article
    背景:肝切除术后肝功能衰竭仍然是肝切除术后可能危及生命的并发症。致瘤性的可溶性抑制2是损伤相关的生物标志物。该研究的目的是评估肝切除术后致瘤性2升高的可溶性抑制,以及它是否可以预测切除术后肝功能衰竭。
    方法:这是一项单中心回顾性研究,包括2015年至2019年期间接受肝切除术的所有患者。在术前和术后第1、2、5和7天测量可溶性致瘤性抑制2的血浆浓度。根据国际肝脏外科研究组定义切除术后肝功能衰竭,并根据Clavien-Dindo分类对发病率进行分级。
    结果:共纳入173例患者(75例接受大切除,98例次切除);术后第1天,可溶性肿瘤抑制2的血浆水平从43.42(范围18.69-119.96)pg/ml增加到2622.23(范围1354.18-4178.27)pg/ml(P<0.001)。术后第1天可溶性致瘤性抑制2浓度可准确预测切除术后肝功能衰竭≥B级(曲线下面积=0.916,P<0.001),其突出表现不受基础疾病的影响。肝脏病理状态和切除程度。截止值,灵敏度,特异性,术后第1天可溶性肿瘤抑制2预测术后肝功能衰竭≥B级的阳性预测值和阴性预测值分别为3700,92%,85%,分别为64%和97%。与可溶性肿瘤抑制2低患者相比,可溶性肿瘤抑制2高患者更频繁地经历了术后肝衰竭≥B级(64.3%(n=36)对2.6%(n=3))和Clavien-DindoIIIa的发病率更高(23.2%(n=13)对5.1%(n=6))。
    结论:对于接受肝切除术的患者,可溶性致瘤性抑制2可能是早在术后第1天的肝切除术后肝功能衰竭≥B级的可靠预测指标。其在控制肝损伤/再生中的作用需要进一步研究。注册号:ChiCTR-OOC-15007210(www.chictr.org.cn/)。
    BACKGROUND: Posthepatectomy liver failure remains a potentially life-threatening complication after hepatectomy. Soluble suppression of tumourigenicity 2 is an injury-related biomarker. The aim of the study was to assess soluble suppression of tumourigenicity 2 elevation after hepatectomy and whether it can predict posthepatectomy liver failure.
    METHODS: This was a single-centre retrospective study including all patients who underwent a liver resection between 2015 and 2019. Plasma concentrations of soluble suppression of tumourigenicity 2 were measured before surgery and at postoperative days 1, 2, 5 and 7. Posthepatectomy liver failure was defined according to the International Study Group of Liver Surgery and the morbidity rate was graded according to the Clavien-Dindo classification.
    RESULTS: A total of 173 patients were included (75 underwent major and 98 minor resection); plasma levels of soluble suppression of tumourigenicity 2 increased from 43.42 (range 18.69-119.96) pg/ml to 2622.23 (range 1354.18-4178.27) pg/ml on postoperative day 1 (P < 0.001). Postoperative day 1 soluble suppression of tumourigenicity 2 concentration accurately predicted posthepatectomy liver failure ≥ grade B (area under curve = 0.916, P < 0.001) and its outstanding performance was not affected by underlying disease, liver pathological status and extent of resection. The cut-off value, sensitivity, specificity, positive predictive value and negative predictive value of postoperative day 1 soluble suppression of tumourigenicity 2 in predicting posthepatectomy liver failure ≥ grade B were 3700, 92%, 85%, 64% and 97% respectively. Soluble suppression of tumourigenicity 2high patients more frequently experienced posthepatectomy liver failure ≥ grade B (64.3% (n = 36) versus 2.6% (n = 3)) and Clavien-Dindo IIIa higher morbidity rate (23.2% (n = 13) versus 5.1% (n = 6)) compared with soluble suppression of tumourigenicity 2low patients.
    CONCLUSIONS: Soluble suppression of tumourigenicity 2 may be a reliable predictor of posthepatectomy liver failure ≥ grade B as early as postoperative day 1 for patients undergoing liver resection. Its role in controlling hepatic injury/regeneration needs further investigation. Registration number: ChiCTR-OOC-15007210 (www.chictr.org.cn/).
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  • 文章类型: Journal Article
    胶质瘤是颅内最常见的原发性肿瘤,死亡率高,预后差。目的探讨NID2基因单核苷酸多态性(SNPs)对胶质瘤发病风险及预后的影响。通过AgenaMassARRAY质谱仪成功对529例神经胶质瘤患者和478例健康对照中的NID2的四个候选SNP进行了基因分型。使用Logistic回归评估不同遗传模型下NID2SNP与神经胶质瘤风险之间的关联。此外,通过Kaplan-Meier(KM)生存曲线和Cox比例风险回归分析,探讨NID2中风险相关SNPs与胶质瘤患者预后的关系.结果显示,rs11846847(OR1.24,p=0.017)和rs1874569(OR1.22,p=0.026)与胶质瘤风险增加显著相关,rs11846847对≤40岁参与者的神经胶质瘤也有增加风险的作用.rs11846847和rs1874569的交互作用模型更适合预测胶质瘤的发病风险。我们还发现rs1874569与神经胶质瘤患者的不良预后之间存在显着关联(HR1.32,p=0.039),尤其是CC基因型与高患者的总生存期(OS)和无进展生存期(PFS)相关。此外,研究表明,在中国汉族人群中,大体全切除或化疗可改善胶质瘤预后。本研究首次为NID2SNPs与神经胶质瘤风险和预后的相关性提供了证据,提示NID2变异可能是神经胶质瘤的潜在因素。
    Glioma is the most common primary intracranial tumor with high mortality and poor prognosis. The purpose of this study was to investigate how single-nucleotide polymorphisms (SNPs) of the NID2 gene affect glioma risk and prognosis. Four candidate SNPs of NID2 in 529 glioma patients and 478 healthy controls were successfully genotyped by Agena MassARRAY mass spectrometer. Logistic regression was utilized to assess the associations between NID2 SNPs and glioma risk under different genetic models. Furthermore, the relationship between risk-related SNPs in NID2 and the prognosis of glioma patients was explored through Kaplan-Meier (KM) survival curve and Cox proportional hazard regression analysis. The results showed that rs11846847 (OR 1.24, p = 0.017) and rs1874569 (OR 1.22, p = 0.026) were significantly associated with an increased risk of glioma, and rs11846847 also had a risk-increasing effect on glioma in participants ≤ 40 years old. The interaction model of rs11846847 and rs1874569 could be more suitable for forecasting glioma risk. We also discovered a significant association between rs1874569 and poor prognosis in glioma patients (HR 1.32, p = 0.039) and especially CC genotype was relevant to shorter overall survival (OS) and progression-free survival (PFS) in patients with high-grade glioma. Additionally, the study demonstrated that gross total resection or chemotherapy improve glioma prognosis in the Chinese Han population. This study is the first to provide evidence for the association of NID2 SNPs with glioma risk and prognosis, suggesting that NID2 variants might be potential factors for glioma.
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  • 文章类型: Journal Article
    背景:自2018年进口PD-1抑制剂pembrolizumab在中国上市以来,中国开启了恶性肿瘤免疫治疗的时代,几种国产PD-1抑制剂陆续上市。了解国产与进口PD-1抑制剂对晚期非小细胞肺癌患者的疗效和安全性是否存在差异,我们在中国的两家三级医院进行了这项回顾性研究.
    方法:通过电子病历系统筛选符合纳入标准的接受tislelizumab或camrelizumab或pembrolizumab治疗的晚期NSCLC患者。共筛查259例患者,但是由于基线不平衡,我们进行了倾向评分匹配,最终包括三组149例患者:pembrolizumab(n=38),tislelizumab(n=38),和camrelizumab(n=73),在倾向评分匹配治疗后,每组的基线特征都非常平衡。
    结果:结果显示,中位无进展期为11.3mvs10.1mvs8.9m;p=0.754;客观缓解率为63.2%vs50%vs57.5%;pembrolizumab的P=0.510,tislelizumab,和carrelizumab,分别。PD-L1表达亚组之间的中位PFS没有显着差异。在安全方面,任何级别的卡雷珠单抗的皮肤毒性均高于其他两组(p=0.034),且3级以上不良反应发生率在三组间差异无统计学意义。
    结论:在这项现实世界的研究中,国产tislelizumab的疗效和安全性,camrelizumab,和进口pembrolizumab具有可比性.
    BACKGROUND: Since the imported PD-1 inhibitor pembrolizumab was listed in China in 2018, China has opened up the era of immunotherapy for malignant tumors, with several domestically produced PD-1 inhibitors coming onto the market one after another. To find out whether there are differences in the efficacy and safety of domestic and imported PD-1 inhibitors in patients with advanced non-small cell lung cancer, we conducted this retrospective study in two tertiary hospitals in China.
    METHODS: Patients with advanced NSCLC treated with tislelizumab or camrelizumab or pembrolizumab who met the inclusion criteria were screened through the electronic medical record system. A total of 259 patients were screened, but due to the unbalanced baseline, we performed propensity score matching and finally included 149 patients in three groups: pembrolizumab (n = 38), tislelizumab (n = 38), and camrelizumab (n = 73), which had very balanced baseline characteristics in each group after propensity score matching treatment.
    RESULTS: The results showed that the median progression-free period was 11.3 m vs 10.1 m vs 8.9 m; p = 0.754; and the objective response rate was 63.2% vs 50% vs 57.5%; P = 0.510 for pembrolizumab, tislelizumab, and carrelizumab, respectively. There was no significant difference in median PFS between PD-L1 expression subgroups. In terms of safety, only skin toxicity of any grade of carrelizumab was higher than that of the other two groups (p = 0.034), and the incidence of grade ≥ 3 adverse reactions was not statistically significant among the three groups.
    CONCLUSIONS: In this real-world study, the efficacy and safety of the domestically produced tislelizumab, camrelizumab, and the imported pembrolizumab were comparable.
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  • 文章类型: Journal Article
    肝细胞癌(HCC)对化疗药物的反应有限一直是治疗的瓶颈。DNA毁伤修复是化学耐药的一个主要缘由。先前的研究已经证实KIN17影响化学敏感性。在这项研究中,我们研究了KIN17对奥沙利铂(L-OHP)治疗肝癌细胞化疗反应和DNA修复的影响.我们使用生物信息学分析评估了KIN17在HCC中的表达和生物学作用。KIN17和RAD51之间的相关性,特别是它们的核表达水平,使用免疫荧光进行评估,肝癌细胞核质分离后的免疫印迹,和免疫组织化学小鼠异种移植肿瘤和人类肝癌组织。结果表明,与正常组织相比,HCC组织中的KIN17表达显着增加。GSEA分析显示KIN17的上调与DNA损伤修复显著相关。KIN17的敲除导致暴露于L-OHP后增加的DNA损伤和降低的细胞存活率。另一方面,KIN17的过表达与L-OHP治疗后DNA损伤减少和细胞存活改善有关.进一步的实验表明KIN17影响RAD51的表达,特别是在细胞核中。KIN17通过触发DNA修复反应在影响HCC对化疗的敏感性中起着至关重要的作用。KIN17的表达增加与HCC患者的不良预后相关。提示KIN17可作为HCC的预后标志物和治疗靶点。
    The limited response of hepatocellular carcinoma (HCC) to chemotherapy drugs has always been a bottleneck in therapy. DNA damage repair is a major reason for chemoresistance. Previous studies have confirmed that KIN17 affects chemosensitivity. In this study, we examined the impact of KIN17 on chemotherapy response and DNA repair in HCC cells treated with oxaliplatin (L-OHP). We evaluated the expression and biological roles of KIN17 in HCC using bioinformatic analysis. The correlation between KIN17 and RAD51, particularly their nuclear expression levels, was evaluated using immunofluorescence, immunoblotting after nucleocytoplasmic separation in HCC cells, and immunohistochemistry of mouse xenograft tumors and human HCC tissues. The results indicated a significant increase in KIN17 expression in HCC tissues compared to normal tissues. The GSEA analysis revealed that upregulation of KIN17 was significantly associated with DNA damage repair. Knockdown of KIN17 led to increased DNA damage and reduced cellular survival after exposure to L-OHP. On the other hand, overexpression of KIN17 was linked to decreased DNA damage and improved cell survival following L-OHP treatment. Further experiments indicated that KIN17 affects the expression of RAD51, particularly in the nucleus. KIN17 plays a crucial role in influencing the sensitivity of HCC to chemotherapy by triggering the DNA repair response. Increased expression of KIN17 is associated with a poor prognosis for HCC patients, indicating that KIN17 could serve as a prognostic marker and therapeutic target for HCC.
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  • 文章类型: Journal Article
    肺腺癌(LUAD)具有高度侵袭性并且易于转移的恶性特征。仍然缺乏合适的生物标志物来促进基于精确的治疗方案的改进。我们使用10种已知的聚类算法和来自4个维度的组学数据的组合来鉴定LUAD的高分辨率分子亚型。随后,基于亚型相关基因和包含10种机器学习算法的集成程序框架,开发了共识机器学习相关预后签名(CMRS).从肿瘤微环境的角度分析了CMRS的效率,基因组景观,免疫疗法,药物敏感性,和单细胞分析。在结果方面,通过多组学聚类,我们确定了2种综合组学亚型(CSs),其中CS1患者的生存结局较差,更高的侵略性,mRNAsi和突变频率。随后,我们基于CS1中上调的13个关键基因开发了CMRS。CMRS的预后预测效率优于大多数已建立的LUAD预后特征。CMRS显示出与肿瘤微环境特征变异和基因组不稳定性产生的强相关性。关于临床表现,高CMRS组的患者更有可能从免疫治疗中获益,而低CMRS更有可能从化疗和靶向药物治疗中获益.此外,我们评估了neratinib等药物,寡霉素A,和其他人可能是高CMRS组患者的候选人。单细胞分析显示CMRS相关基因主要在上皮细胞中表达。在这项研究中基于多组学数据确定的新分子亚型可以为LUAD的分层治疗提供新的见解,而CMRS的发展可以作为LUAD精准治疗和免疫治疗获益程度的候选指标.
    Lung adenocarcinoma (LUAD) has a malignant characteristic that is highly aggressive and prone to metastasis. There is still a lack of suitable biomarkers to facilitate the refinement of precision-based therapeutic regimens. We used a combination of 10 known clustering algorithms and the omics data from 4 dimensions to identify high-resolution molecular subtypes of LUAD. Subsequently, consensus machine learning-related prognostic signature (CMRS) was developed based on subtypes related genes and an integrated program framework containing 10 machine learning algorithms. The efficiency of CMRS was analyzed from the perspectives of tumor microenvironment, genomic landscape, immunotherapy, drug sensitivity, and single-cell analysis. In terms of results, through multi-omics clustering, we identified 2 comprehensive omics subtypes (CSs) in which CS1 patients had worse survival outcomes, higher aggressiveness, mRNAsi and mutation frequency. Subsequently, we developed CMRS based on 13 key genes up-regulated in CS1. The prognostic predictive efficiency of CMRS was superior to most established LUAD prognostic signatures. CMRS demonstrated a strong correlation with tumor microenvironmental feature variants and genomic instability generation. Regarding clinical performance, patients in the high CMRS group were more likely to benefit from immunotherapy, whereas low CMRS were more likely to benefit from chemotherapy and targeted drug therapy. In addition, we evaluated that drugs such as neratinib, oligomycin A, and others may be candidates for patients in the high CMRS group. Single-cell analysis revealed that CMRS-related genes were mainly expressed in epithelial cells. The novel molecular subtypes identified in this study based on multi-omics data could provide new insights into the stratified treatment of LUAD, while the development of CMRS could serve as a candidate indicator of the degree of benefit of precision therapy and immunotherapy for LUAD.
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  • 文章类型: Journal Article
    HCC是最常见的致命恶性肿瘤。虽然手术切除是主要的治疗策略,由于肿瘤异质性,大多数患者不符合切除条件,潜在的肝脏疾病,或合并症。因此,本研究探讨了多分子靶向给药治疗HCC的可能性。在这项研究中,我们构建了共表达凋亡素和蜂毒素(MEL)基因的重组腺病毒。通过细胞凋亡实验检测重组腺病毒对肝癌细胞的抑制作用,迁移,入侵,和其他因素。使用皮下HCC小鼠评估体内肿瘤抑制作用。结果表明,共表达抗肿瘤基因TAT和凋亡素的重组腺病毒,RGD和MEL能显著抑制其增殖,迁移,通过诱导活性氧(ROS)水平的增加和肝癌细胞的侵袭,凋亡蛋白如Bax的上调,裂解的caspase-3和裂解的caspase-9,以及抗凋亡蛋白Bcl-2的下调。在皮下肝癌小鼠中,重组腺病毒诱导肿瘤细胞凋亡,并抑制肿瘤生长。总之,共表达凋亡素和MEL的重组腺病毒可以在体内和体外抑制肿瘤细胞的生长和增殖。
    HCC is the most common fatal malignancy. Although surgical resection is the primary treatment strategy, most patients are not eligible for resection due to tumor heterogeneity, underlying liver disease, or comorbidities. Therefore, this study explores the possibility of multi-molecular targeted drug delivery in treating HCC. In this study, we constructed the recombinant adenovirus co-expressing apoptin and melittin (MEL) genes. The inhibitory effect of the recombinant adenovirus on hepatocellular carcinoma cells was detected through experiments on cell apoptosis, migration, invasion, and other factors. The tumor inhibitory effect in vivo was assessed using subcutaneous HCC mice. Results showed that recombinant adenovirus co-expressing anti-tumor genes TAT and apoptin, RGD and MEL can significantly inhibit the proliferation, migration, and invasion of HCC cells by inducing an increase in reactive oxygen species (ROS) levels, upregulation of apoptotic proteins such as Bax, cleaved caspase-3, and cleaved caspase-9, and downregulation of the anti-apoptotic protein Bcl-2. In subcutaneous HCC mice, recombinant adenovirus induced significant apoptosis in tumor, and inhibited tumor growth. In conclusion, recombinant adenovirus co-expressing apoptin and MEL can inhibit the growth and proliferation of tumor cells both in vivo and in vitro.
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  • 文章类型: Journal Article
    致死性(3)恶性脑肿瘤样蛋白2(L3MBTL2)与转录抑制和染色质压缩有关。然而,L3MBTL2在乳腺癌(BRCA)中的生物学功能和作用机制尚不明确.这里,我们发现L3MBTL2是Nischarin(NISCH)下降的原因,一种众所周知的肿瘤抑制剂,在BRCA,并探讨了详细的机制。敲除L3MBTL2降低了赖氨酸-119(H2AK119ub)组蛋白H2A的单纯质化,导致与NISCH启动子的结合减少和NISCH的表达增加。同时,L3MBTL2的敲除减少增殖,迁移,入侵,和BRCA细胞的上皮-间质转化(EMT),和增加细胞凋亡,NSCH击倒后减弱了。核仁转录因子1(UBTF)在BRCA中诱导L3MBTL2转录,UBTF沉默对BRCA细胞EMT的抑制作用也被NISCH敲低逆转。敲除UBTF可减缓肿瘤进展并减弱肺肿瘤浸润,而同时敲除NISCH加速EMT并增加肿瘤肺转移。一起来看,我们的结果表明,L3MBTL2被UBTF转录激活,在BRCA中发挥致癌功能,通过催化H2AK119Ub和降低NISCH的表达。
    Lethal(3)malignant brain tumor-like protein 2 (L3MBTL2) has been related to transcriptional inhibition and chromatin compaction. Nevertheless, the biological functions and mechanisms of L3MBTL2 are undefined in breast cancer (BRCA). Here, we revealed that L3MBTL2 is responsible for the decline of Nischarin (NISCH), a well-known tumor suppressor, in BRCA, and explored the detailed mechanism. Knockdown of L3MBTL2 reduced monoubiquitination of histone H2A at lysine-119 (H2AK119ub), leading to reduced binding to the NISCH promoter and increased expression of NISCH. Meanwhile, the knockdown of L3MBTL2 decreased proliferation, migration, invasion, and epithelial-mesenchymal transition (EMT) of BRCA cells, and increased apoptosis, which were abated by NISCH knockdown. Nucleolar transcription factor 1 (UBTF) induced the transcription of L3MBTL2 in BRCA, and the suppressing effects of UBTF silencing on EMT in BRCA cells were also reversed by NISCH knockdown. Knockdown of UBTF slowed tumor progression and attenuated lung tumor infiltration, whereas simultaneous knockdown of NISCH accelerated EMT and increased tumor lung metastasis. Taken together, our results show that L3MBTL2, transcriptionally activated by UBTF, exerts oncogenic functions in BRCA, by catalyzing H2AK119Ub and reducing expression of NISCH.
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  • 文章类型: Journal Article
    目的:随着前列腺磁共振成像(MRI)的广泛应用,在前列腺MR中对病变检测和准确诊断的需求不断增加,这在很大程度上依赖于令人满意的图像质量。重点关注前列腺成像报告和数据系统(PI-RADS)中涉及的主要序列,这项研究评估了临床实践中常见的质量问题(如信噪比(SNR)、神器,边界,和增强)。该研究的目的是确定图像质量对临床意义的前列腺癌(csPCa)检测的影响,阳性预测值(PPV)和放射科医生在不同序列和前列腺区的诊断。
    方法:本回顾性研究包括2021年2月至2022年12月进行前列腺MRI检查并有明确病理报告的306例患者。所有组织病理学标本均根据国际泌尿外科病理学会(ISUP)的建议进行评估。ISUP等级组≥2被认为是csPCa。来自不同中心的三个放射科医生分别从以下十个方面对图像质量进行了二进制分类评估:(1)轴平面中的T2WI:SNR,前列腺边界条件,伪影的存在;(2)矢状面或冠状面中的T2WI:前列腺边界条件;(3)DWI:SNR,外围区和过渡区之间的轮廓,文物的存在,DWI和T2WI图像的匹配;(4)DCE:闭孔动脉增强的评价,动态对比度增强的评价。Fleiss\'Kappa用于确定读者之间的协议。使用Wilson的95%置信区间(95%CI)计算PPV。采用卡方检验计算统计学意义。P值<0.05被认为是统计学上显著的。
    结果:高质量的图像在轴向T2WI中具有更高的csPCa检出率(56.5%至64.3%),DWI,DCE,轴向T2WI的SNR有显著的统计学差异(p0.002),轴向T2WI中存在伪影(p0.044),DWI中存在伪影(p<0.001),DWI和T2WI图像的匹配(p<0.001)。高质量图像具有较高的PPV(72.5%至78.8%),并且在轴向T2WI中显示出显着的统计学意义,DWI,DCE。此外,我们发现PI-RADS3(24.0%至52.9%)比PI-RADS4-5(20.6%至39.3%)包含更多的低质量图像,在轴向T2WI(p0.048)和DWI中存在伪影(p0.001)的前列腺边界条件方面存在显着统计学差异。关于不同前列腺区的csPCa检测与图像质量之间的关系,这项研究发现,仅在外周区(PZ)的高图像(63.5%~75.7%)和低质量图像(30.0%~50.0%)之间观察到显著的统计学差异.
    结论:前列腺MRI质量可能对诊断性能有影响。较差的图像质量与较低的csPCa检测率和PPV相关,这可能导致放射科医生诊断模糊的增加(PI-RADS3),尤其是位于PZ的病变。
    OBJECTIVE: With the widespread clinical application of prostate magnetic resonance imaging (MRI), there has been an increasing demand for lesion detection and accurate diagnosis in prostate MR, which relies heavily on satisfactory image quality. Focusing on the primary sequences involved in Prostate Imaging Reporting and Data System (PI-RADS), this study have evaluated common quality issues in clinical practice (such as signal-to-noise ratio (SNR), artifacts, boundaries, and enhancement). The aim of the study was to determine the impact of image quality on clinically significant prostate cancer (csPCa) detection, positive predictive value (PPV) and radiologist\'s diagnosis in different sequences and prostate zones.
    METHODS: This retrospective study included 306 patients who underwent prostate MRI with definitive pathological reports from February 2021 to December 2022. All histopathological specimens were evaluated according to the recommendations of the International Society of Urological Pathology (ISUP). An ISUP Grade Group ≥ 2 was considered as csPCa. Three radiologists from different centers respectively performed a binary classification assessment of image quality in the following ten aspects: (1) T2WI in the axial plane: SNR, prostate boundary conditions, the presence of artifacts; (2) T2WI in the sagittal or coronal plane: prostate boundary conditions; (3) DWI: SNR, delineation between the peripheral and transition zone, the presence of artifacts, the matching of DWI and T2WI images; (4) DCE: the evaluation of obturator artery enhancement, the evaluation of dynamic contrast enhancement. Fleiss\' Kappa was used to determine the inter-reader agreement. Wilson\'s 95% confidence interval (95% CI) was used to calculate PPV. Chi-square test was used to calculate statistical significance. A p-value < 0.05 was considered statistically significant.
    RESULTS: High-quality images had a higher csPCa detection rate (56.5% to 64.3%) in axial T2WI, DWI, and DCE, with significant statistical differences in SNR in axial T2WI (p 0.002), the presence of artifacts in axial T2WI (p 0.044), the presence of artifacts in DWI (p < 0.001), and the matching of DWI and T2WI images (p < 0.001). High-quality images had a higher PPV (72.5% to 78.8%) and showed significant statistical significance in axial T2WI, DWI, and DCE. Additionally, we found that PI-RADS 3 (24.0% to 52.9%) contained more low-quality images compared to PI-RADS 4-5 (20.6% to 39.3%), with significant statistical differences in the prostate boundary conditions in axial T2WI (p 0.048) and the presence of artifacts in DWI (p 0.001). Regarding the relationship between csPCa detection and image quality in different prostate zones, this study found that significant statistical differences were only observed between high- (63.5% to 75.7%) and low-quality (30.0% to 50.0%) images in the peripheral zone (PZ).
    CONCLUSIONS: Prostate MRI quality may have an impact on the diagnostic performance. The poorer image quality is associated with lower csPCa detection rates and PPV, which can lead to an increase in radiologist\'s ambiguous diagnosis (PI-RADS 3), especially for the lesions located at PZ.
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  • 文章类型: Journal Article
    推断基因调控网络(GRN)是系统生物学的重要挑战之一。和许多优秀的计算方法已经被提出;然而,仍然存在一些挑战,特别是在真实的数据集。在这项研究中,我们提出了基于有向图卷积神经网络的GRN推断方法(DGCGRN)。为了更好地理解和处理GRN的有向图结构数据,进行了有向图卷积神经网络,在保留有向图结构信息的同时,还充分利用了邻居节点特征。图神经网络采用局部增广策略解决了GRN中大量低度节点导致预测精度差的问题。此外,对于像大肠杆菌这样的真实数据,利用Bi-GRU提取隐藏特征,计算基因序列的统计理化特征,得到序列特征。在训练阶段,采用动态更新策略,将得到的边预测分数转换为边权重,指导模型后续的训练过程。在合成基准数据集和真实数据集上的结果表明,DGCGRN的预测性能明显优于现有模型。此外,膀胱尿路上皮癌和肺癌细胞的案例研究也说明了所提出模型的性能。
    Inferring gene regulatory network (GRN) is one of the important challenges in systems biology, and many outstanding computational methods have been proposed; however there remains some challenges especially in real datasets. In this study, we propose Directed Graph Convolutional neural network-based method for GRN inference (DGCGRN). To better understand and process the directed graph structure data of GRN, a directed graph convolutional neural network is conducted which retains the structural information of the directed graph while also making full use of neighbor node features. The local augmentation strategy is adopted in graph neural network to solve the problem of poor prediction accuracy caused by a large number of low-degree nodes in GRN. In addition, for real data such as E.coli, sequence features are obtained by extracting hidden features using Bi-GRU and calculating the statistical physicochemical characteristics of gene sequence. At the training stage, a dynamic update strategy is used to convert the obtained edge prediction scores into edge weights to guide the subsequent training process of the model. The results on synthetic benchmark datasets and real datasets show that the prediction performance of DGCGRN is significantly better than existing models. Furthermore, the case studies on bladder uroepithelial carcinoma and lung cancer cells also illustrate the performance of the proposed model.
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  • 文章类型: Journal Article
    结直肠癌的医治一向是肿瘤研讨范畴的主要挑衅。2020年全球结直肠癌新发病例估计为1148515例,死亡人数估计为576858例,表明死亡率约占疾病发病率的一半。迫切需要开发用于结直肠癌治疗的新药和策略。负载卡巴他赛(CTX)的热敏可注射水凝胶PDLLA-PEG-PDLLA(PLEL)用于研究其对原位结直肠癌小鼠的抗肿瘤作用。CTX/PLEL的特征在于室温下的溶液状态和生理温度下的水凝胶状态。赋形剂MPEG-PCL和PDLLA-PEG-PDLLA具有良好的生物相容性和生物降解性。简单的材料合成和制备工艺使得该系统具有成本效益并且更有利于临床转化。通过将皮下肿瘤移植到小鼠的盲肠上,建立了原位结直肠癌模型。根据体内实验的结果,CTX/PLEL显著抑制小鼠原位结直肠癌和肝转移。结果表明,CTX/PLEL纳米粒制剂具有较高的安全性和良好的抗肿瘤作用,在结直肠癌治疗中具有很大的应用潜力。
    The treatment of colorectal cancer is always a major challenge in the field of cancer research. The number of estimated new cases of colorectal cancer worldwide in 2020 is 1 148 515, and the estimated number of deaths is 576 858, revealing that mortality accounted for approximately half of the disease incidence. The development of new drugs and strategies for colorectal cancer treatment is urgently needed. Thermosensitive injectable hydrogel PDLLA-PEG-PDLLA (PLEL) loaded with cabazitaxel (CTX) is used to explore its anti-tumor effect on mice with orthotopic colorectal cancer. CTX/PLEL is characterized by a solution state at room temperature and a hydrogel state at physiologic temperature. The excipients MPEG-PCL and PDLLA-PEG-PDLLA have good biocompatibility and biodegradability. The simple material synthesis and preparation process renders this system cost-effective and more conducive to clinical transformation. An orthotopic colorectal cancer model is established by transplantation subcutaneous tumors onto the cecum of mice. According to the results of experiments in vivo, CTX/PLEL significantly inhibits orthotopic colorectal cancer and liver metastasis in mice. The results indicate that CTX/PLEL nanoparticle preparations have high security and excellent anti-tumor effects, and have great application potential in colorectal cancer therapy.
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