transport genes

  • 文章类型: Journal Article
    背景:纳米技术已广泛应用于农业科学。在降低水稻中金属毒性和积累的过程中,纳米材料表现出尺寸效应。然而,关于这些尺寸效应的知识有限。我们旨在探讨不同大小的纳米氧化锌(ZnO-NPs)肥料对水稻生长和镉(Cd)积累的影响,并阐明水稻降低Cd的潜在机制。叶面施用不同浓度(0.5和2mmolL-1)和不同尺寸(30和300nmZnO-NP)的锌(Zn)肥料(Zn(NO3)2),以研究对水稻生长的影响,Cd积累和亚细胞分布,以及Zn-Cd转运基因的表达。
    结果:结果表明,所有叶面喷施均可使水稻籽粒中的Cd浓度显着降低41-61%,其中大尺寸和低浓度的ZnO-NP的施用降低幅度最高。这与叶细胞壁中Cd固定的增强和茎节中Cd转运基因(OsZIP7,OsHMA2,OsHMA3)的下调有关。叶面ZnO-NP的应用可以使晶粒中的Zn浓度增加9-21%。叶面施用Zn(NO3)2和小尺寸ZnO-NP促进了植物生长和水稻产量,而大尺寸ZnO-NPs的施用显著降低了水稻的生长和产量。
    结论:研究表明,水稻产量和Cd的减少取决于叶面喷施的大小和浓度,在综合考虑产量和Cd减少时,使用大尺寸的ZnO-NPs是最有效的策略。©2024化学工业学会。
    BACKGROUND: Nanotechnology has been widely applied in agricultural science. During the process of reducing metal toxicity and accumulation in rice, nanomaterials exhibit size effects. However, there is limited knowledge regarding these size effects. We aim to explore the impact of fertilizer with various sizes of ZnO nanoparticles (ZnO-NPs) on rice growth and cadmium (Cd) accumulation and to elucidate the potential mechanism of Cd reduction in rice. Foliar applications of different concentrations (0.5 and 2 mmol L-1) and different sizes (30 and 300 nm ZnO-NPs) of zinc (Zn) fertilizer (Zn(NO3)2) were performed to investigate the effects on rice growth, Cd accumulation and subcellular distribution, and the expression of Zn-Cd transport genes.
    RESULTS: The results suggested that all the foliar sprayings can significantly reduce the Cd concentrations in rice grains by 41-61% with the highest reduction in the application of ZnO-NPs with large size and low concentration. This is related to the enhancement of Cd fixation in leaf cell walls and downregulation of Cd transport genes (OsZIP7, OsHMA2, OsHMA3) in stem nodes. Foliar ZnO-NPs applications can increase the Zn concentration in grains by 9-21%. Foliar applications of Zn(NO3)2 and small-sized ZnO-NPs promoted plant growth and rice yield, while the application of large-sized ZnO-NPs significantly reduced rice growth and yield.
    CONCLUSIONS: The study suggests that the rice yield and Cd reduction are dependent on the size and concentration of foliar spraying and the use of large-sized ZnO-NPs is the most effective strategy when considering both yield and Cd reduction comprehensively. © 2024 Society of Chemical Industry.
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  • 文章类型: Journal Article
    在动物的适应性进化过程中,宿主及其肠道微生物群共同适应不同的海拔。目前,关于不同海拔高度藏绵羊瘤胃微生物-肝肠轴的报道很少。因此,本研究旨在探讨瘤胃微生物-挥发性脂肪酸(VFAs)-VFAs转运体基因相互作用对藏羊糖异生关键酶及相关基因的调控作用。瘤胃发酵参数,瘤胃微生物密度,肝脏糖异生活性和相关基因的测定和分析使用气相色谱法,RT-qPCR等研讨办法。相关分析表明,不同海拔地区藏绵羊瘤胃微生物区系-VFAs-肝糖异生之间存在相互关系。在微生物群中,黄色反刍动物(R.flavefaciens),白乳球菌(R.albus),产琥珀酸纤维杆菌和嗜淀粉反刍杆菌(R.嗜淀粉样蛋白)与丙酸显著相关(p<0.05),而丙酸与转运基因单羧酸转运蛋白4(MCT4)和阴离子交换蛋白2(AE2)显着相关(p<0.05)。丙酸与丙酮酸羧化酶等关键酶显著相关,磷酸烯醇式丙酮酸羧化酶和葡萄糖(Glu)参与糖异生途径(p<0.05)。此外,这些基因的表达与相关基因的表达显着相关,即,叉头盒蛋白O1(FOXO1)和线粒体磷酸烯醇丙酮酸羧激酶2(PCK2)(p<0.05)。结果表明,不同海拔高度瘤胃微生物密度存在差异,代谢产生的VFA含量不同,导致糖异生关键酶活性和相关基因表达发生适应性变化。
    During the adaptive evolution of animals, the host and its gut microbiota co-adapt to different elevations. Currently, there are few reports on the rumen microbiota-hepato-intestinal axis of Tibetan sheep at different altitudes. Therefore, the purpose of this study was to explore the regulatory effect of rumen microorganism-volatile fatty acids (VFAs)-VFAs transporter gene interactions on the key enzymes and genes related to gluconeogenesis in Tibetan sheep. The rumen fermentation parameters, rumen microbial densities, liver gluconeogenesis activity and related genes were determined and analyzed using gas chromatography, RT-qPCR and other research methods. Correlation analysis revealed a reciprocal relationship among rumen microflora-VFAs-hepatic gluconeogenesis in Tibetan sheep at different altitudes. Among the microbiota, Ruminococcus flavefaciens (R. flavefaciens), Ruminococcus albus (R. albus), Fibrobactersuccinogenes and Ruminobacter amylophilus (R. amylophilus) were significantly correlated with propionic acid (p < 0.05), while propionic acid was significantly correlated with the transport genes monocarboxylate transporter 4 (MCT4) and anion exchanger 2 (AE2) (p < 0.05). Propionic acid was significantly correlated with key enzymes such as pyruvate carboxylase, phosphoenolpyruvic acid carboxylase and glucose (Glu) in the gluconeogenesis pathway (p < 0.05). Additionally, the expressions of these genes were significantly correlated with those of the related genes, namely, forkhead box protein O1 (FOXO1) and mitochondrial phosphoenolpyruvate carboxykinase 2 (PCK2) (p < 0.05). The results showed that rumen microbiota densities differed at different altitudes, and the metabolically produced VFA contents differed, which led to adaptive changes in the key enzyme activities of gluconeogenesis and the expressions of related genes.
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  • 文章类型: Journal Article
    Entadaphaseoloides茎以其高药用价值和观赏价值而闻名。黄酮类化合物是菜豆茎中的主要活性成分之一。然而,黄酮类化合物积累的调控机制尚缺乏。这里,通过代谢组和转录组分析研究了E.phaseoloides中不同发育阶段茎的植物化学化合物和转录本。最老茎的代谢产物特征明显不同于年轻和较老的茎组织。共检测到198种黄酮类化合物,和黄酮,黄酮醇,花青素,异黄酮,黄烷酮是主要的亚类。代谢组数据显示,幼茎和老茎中的acacetin含量明显高于最老的茎。芦丁和肉豆蔻素在最古老的茎中显示出显着较高的水平。在RNA-seq数据中鉴定并分类了总共143个MYB和143个bHLH。同时,鉴定了34个类黄酮生物合成结构基因。基于类黄酮生物合成相关结构基因的表达模式,它表明黄酮醇,花青素,原花青素的生物合成在E.phaseoloides茎的发育过程中首先活跃,花青素或原花青素生物合成分支占主导地位;黄酮生物合成分支在茎发育后期活跃。通过对转录组和代谢组数据的相关性分析,确定了与黄酮类化合物合成和运输相关的潜在候选基因。其中,MYBs,bHLH,和TTG1共同调节黄酮醇和结构基因的生物合成,bHLH和转运蛋白基因共同调节花色苷的生物合成。此外,WDR基因TTG1样(AN11)可能与IIIbbHLH和R2R3-MYB蛋白特定组合调节二氢查耳酮和黄酮醇的生物合成。此外,转运基因蛋白TRANSPARENTTESTA12样基因正调控芦丁的积累,ABC转运体B家族成员基因的同源物与黄酮刺槐素的含量呈正相关。这项研究提供了参与类黄酮生物合成的候选基因,类黄酮组成信息和类黄酮积累特征,提高了我们对E.phaseoloides茎中类黄酮生物合成的MYBs和bHLHs相关调节网络的理解,为菜豆茎中黄酮类生物合成的代谢工程提供参考。
    Entada phaseoloides stem is known for its high medicinal benefits and ornamental value. Flavonoids are one of the main active constituents in E. phaseoloides stem. However, the regulatory mechanism of flavonoids accumulation in E. phaseoloides is lacking. Here, phytochemical compounds and transcripts from stems at different developmental stages in E. phaseoloides were investigated by metabolome and transcriptome analysis. The metabolite profiling of the oldest stem was obviously different from young and older stem tissues. A total of 198 flavonoids were detected, and flavones, flavonols, anthocyanins, isoflavones, and flavanones were the main subclasses. The metabolome data showed that the content of acacetin was significantly higher in the young stem and older stem than the oldest stem. Rutin and myricitrin showed significantly higher levels in the oldest stem. A total of 143 MYBs and 143 bHLHs were identified and classified in the RNA-seq data. Meanwhile, 34 flavonoid biosynthesis structural genes were identified. Based on the expression pattern of structural genes involved in flavonoid biosynthesis, it indicated that flavonol, anthocyanin, and proanthocyanin biosynthesis were first active during the development of E. phaseoloides stem, and the anthocyanin or proanthocyanin biosynthesis branch was dominant; the flavone biosynthesis branch was active at the late developmental stage of the stem. Through the correlation analysis of transcriptome and metabolome data, the potential candidate genes related to regulating flavonoid synthesis and transport were identified. Among them, the MYBs, bHLH, and TTG1 are coregulated biosynthesis of flavonols and structural genes, bHLH and transporter genes are coregulated biosynthesis of anthocyanins. In addition, the WDR gene TTG1-like (AN11) may regulate dihydrochalcones and flavonol biosynthesis in specific combinations with IIIb bHLH and R2R3-MYB proteins. Furthermore, the transport gene protein TRANSPARENT TESTA 12-like gene is positively regulated the accumulation of rutin, and the homolog of ABC transporter B family member gene is positively correlated with the content of flavone acacetin. This study offered candidate genes involved in flavonoid biosynthesis, information of flavonoid composition and characteristics of flavonoids accumulation, improved our understanding of the MYBs and bHLHs-related regulation networks of flavonoid biosynthesis in E. phaseoloides stem, and provided references for the metabolic engineering of flavonoid biosynthesis in E. phaseoloides stem.
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  • 文章类型: Journal Article
    Lipopolysaccharide (LPS) is essential for successful nodulation during the symbiosis of rhizobia and legumes. However, the detailed mechanism of the LPS in this process has not yet been clearly elucidated. In this study, the effects of common bean seed exudates on the growth, lipopolysaccharide production, and lipopolysaccharide transport genes expression (lpt) of Rhizobium anhuiense were investigated. Rhizobium anhuiense exposed to exudates showed changes in LPS electrophoretic profiles and content, whereby the LPS band was wider and the LPS content was higher in R. anhuiense treated with seed exudates. Exudates enhanced cell growth of R. anhuiense in a concentration-dependent manner; R. anhuiense exposed to higher doses of the exudate showed faster growth. Seven lpt genes of R. anhuiense were amplified and sequenced. Sequences of six lpt genes, except for lptE, were the same as those found in previously analyzed R. anhuiense strains, while lptE shared low sequence similarity with other strains. Exposure to the exudates strongly stimulated the expression of all lpt genes. Approximately 6.7- (lptG) to 301-fold (lptE) increases in the transcriptional levels were observed after only 15 min of exposure to exudates. These results indicate that seed exudates affect the LPS by making the cell wall structure more conducive to symbiotic nodulation.
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