symbiotic bacteria

共生细菌
  • 文章类型: Journal Article
    次级代谢产物,活生物体产生的生物活性化合物,可以揭示自然界中的共生关系。在这项研究中,从含有次生代谢产物的溶剂上清液中提取与共生细菌(Xenorhabdusstockiae和Photorhabdusluminescens)相关的土传昆虫病原线虫,证明了对大肠杆菌的显著抑制作用,金黄色葡萄球菌,B.subtilus,P.奇迹,E.粪便,还有P.Stutzeri.通过傅立叶变换红外光谱对这些次生代谢物的表征揭示了蛋白质的胺基,多酚的羟基和羧基,多糖的羟基,和有机酸的羧基。此外,通过高效液相色谱法分析获得的粗提物,以基本鉴定潜在的生物活性肽。气相色谱-质谱分析来自Xenorhabdusstoriae的乙酸乙酯提取物确定了主要化合物,包括壬酸衍生物,脯氨酸,巴霉素,八癸醛衍生物,三氧杂-5-氮杂-1-硅双环,4-十八进制,甲酯,油酸,和1,2-苯二羧酸。从发光光纹素中进行额外的提取,产生了功能化合物,例如吲哚-3-乙酸,邻苯二甲酸,1-十四醇,奈莫索诺,1-二十烷醇,和不饱和脂肪酸。这些发现支持用于未来病原体抑制的新型天然抗微生物剂的潜在开发。
    Secondary metabolites, bioactive compounds produced by living organisms, can unveil symbiotic relationships in nature. In this study, soilborne entomopathogenic nematodes associated with symbiotic bacteria (Xenorhabdus stockiae and Photorhabdus luminescens) were extracted from solvent supernatant containing secondary metabolites, demonstrating significant inhibitory effects against E. coli, S. aureus, B. subtilus, P. mirabilis, E. faecalis, and P. stutzeri. The characterization of these secondary metabolites by Fourier transforms infrared spectroscopy revealed amine groups of proteins, hydroxyl and carboxyl groups of polyphenols, hydroxyl groups of polysaccharides, and carboxyl groups of organic acids. Furthermore, the obtained crude extracts were analyzed by high-performance liquid chromatography for the basic identification of potential bioactive peptides. Gas chromatography-mass spectrometry analysis of ethyl acetate extracts from Xenorhabdus stockiae identified major compounds including nonanoic acid derivatives, proline, paromycin, octodecanal derivatives, trioxa-5-aza-1-silabicyclo, 4-octadecenal, methyl ester, oleic acid, and 1,2-benzenedicarboxylicacid. Additional extraction from Photorhabdus luminescens yielded functional compounds such as indole-3-acetic acid, phthalic acid, 1-tetradecanol, nemorosonol, 1-eicosanol, and unsaturated fatty acids. These findings support the potential development of novel natural antimicrobial agents for future pathogen suppression.
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  • 文章类型: Journal Article
    海洋光养生物和相关细菌之间的相互作用是它们在海洋中成功生存的重要策略,但是对它们的代谢关系知之甚少。这里,分析了9种海洋红藻培养物的藻类球(AS)和散装溶液(BS)中的细菌群落,在AS中,与BS相比,鉴定出的Roseibium和Phycisphaera的含量明显更高。RMAR6-6的代谢特征(分离和基因组测序),PhycisphaeraMAG12(通过宏基因组测序获得),和一只海洋红藻,紫菜卟啉CCMP1328(来自GenBank),进行了生物信息学分析。RMAR6-6具有固定氮和产生B族维生素(B1,B2,B5,B6,B9和B12)的遗传能力,细菌铁蛋白,二甲基磺丙酸酯(DMSP),和可能促进藻类生长的苯乙酸盐,而MAG12可能具有有限的代谢能力,不产生维生素B9和B12,DMSP,苯乙酸,和铁载体,但是有能力产生杆菌肽,可能调节藻类微生物组。紫癜CCMP1328缺乏固定氮和产生维生素B12,DMSP,苯乙酸,和铁载体。结果表明,RMAR6-6的固氮能力促进了紫癜的生长,DMSP降低了紫癜的氧化应激。还通过对它们的单培养和共培养的转录组学分析,研究了菌株RMAR6-6和紫癜CCMP1328之间的代谢相互作用。一起来看,提出了玫瑰和紫癜之间的潜在代谢关系。这项研究为成功生长提供了对海洋藻类和藻类相关细菌之间代谢关系的更好理解。
    在线版本包含补充材料,可在10.1007/s42995-024-00227-z获得。
    Mutualistic interactions between marine phototrophs and associated bacteria are an important strategy for their successful survival in the ocean, but little is known about their metabolic relationships. Here, bacterial communities in the algal sphere (AS) and bulk solution (BS) of nine marine red algal cultures were analyzed, and Roseibium and Phycisphaera were identified significantly more abundantly in AS than in BS. The metabolic features of Roseibium RMAR6-6 (isolated and genome-sequenced), Phycisphaera MAG 12 (obtained by metagenomic sequencing), and a marine red alga, Porphyridium purpureum CCMP1328 (from GenBank), were analyzed bioinformatically. RMAR6-6 has the genetic capability to fix nitrogen and produce B vitamins (B1, B2, B5, B6, B9, and B12), bacterioferritin, dimethylsulfoniopropionate (DMSP), and phenylacetate that may enhance algal growth, whereas MAG 12 may have a limited metabolic capability, not producing vitamins B9 and B12, DMSP, phenylacetate, and siderophores, but with the ability to produce bacitracin, possibly modulating algal microbiome. P. purpureum CCMP1328 lacks the genetic capability to fix nitrogen and produce vitamin B12, DMSP, phenylacetate, and siderophore. It was shown that the nitrogen-fixing ability of RMAR6-6 promoted the growth of P. purpureum, and DMSP reduced the oxidative stress of P. purpureum. The metabolic interactions between strain RMAR6-6 and P. purpureum CCMP1328 were also investigated by the transcriptomic analyses of their monoculture and co-culture. Taken together, potential metabolic relationships between Roseibium and P. purpureum were proposed. This study provides a better understanding of the metabolic relationships between marine algae and algae-associated bacteria for successful growth.
    UNASSIGNED: The online version contains supplementary material available at 10.1007/s42995-024-00227-z.
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  • 文章类型: Journal Article
    烟粉虱分布于全球,作为农业害虫和病毒载体,其经济和生态成本相当高。昆虫病原真菌金叶绿僵菌以其杀虫活性而闻名,但是它对粉虱的影响研究不足。我们调查了半持续传播的瓜类绿黄病毒(CCYV)的感染如何影响粉虱对斑驳菌暴露的敏感性。我们发现,与非病毒性昆虫相比,存在真菌感染时,病毒性粉虱的死亡率增加。高通量16SrRNA测序还揭示了由于CCYV和真菌的存在,粉虱细菌微生物组多样性和结构的显著改变。具体来说,专性共生体Portiera在暴露于M.anisopliae的含病毒粉虱中的相对丰度降低。兼性哈密顿菌和立克次体共生体在各组间表现出变异性,但在真菌处理的非含病毒粉虱中占主导地位。我们的结果阐明了害虫之间的三角形相互作用,他们的病原体,和共生体动力学,可以为利用生物农药的综合管理策略提供信息。这项工作强调了灰霉病菌可持续控制粉虱的前景,同时为阐明微生物介导的媒介能力转移背后的机制奠定了基础。
    Bemisia tabaci is distributed globally and incurs considerable economic and ecological costs as an agricultural pest and viral vector. The entomopathogenic fungus Metarhizium anisopliae has been known for its insecticidal activity, but its impacts on whiteflies are understudied. We investigated how infection with the semi-persistently transmitted Cucurbit chlorotic yellows virus (CCYV) affects whitefly susceptibility to M. anisopliae exposure. We discovered that viruliferous whiteflies exhibited increased mortality when fungus infection was present compared to non-viruliferous insects. High throughput 16S rRNA sequencing also revealed significant alterations of the whitefly bacterial microbiome diversity and structure due to both CCYV and fungal presence. Specifically, the obligate symbiont Portiera decreased in relative abundance in viruliferous whiteflies exposed to M. anisopliae. Facultative Hamiltonella and Rickettsia symbionts exhibited variability across groups but dominated in fungus-treated non-viruliferous whiteflies. Our results illuminate triangular interplay between pest insects, their pathogens, and symbionts-dynamics which can inform integrated management strategies leveraging biopesticides This work underscores the promise of M. anisopliae for sustainable whitefly control while laying the groundwork for elucidating mechanisms behind microbe-mediated shifts in vector competence.
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  • 文章类型: Journal Article
    植物的根际系统拥有多样化的细菌群,对植物产生有益的影响,如植物生长促进根际细菌(PGPR),具有疾病抑制活性的生物控制剂,与根瘤形成共生的固氮菌。在植物中的有效定殖对于促进这些有益活动至关重要。然而,根定植的过程是复杂的,由多个阶段组成,包括趋化性,附着力,聚合,和生物膜的形成。第二信使,c-di-GMP(环双-(3'-5')二聚磷酸鸟苷),在多种生理过程中起着关键的调节作用。本文综述了近年来c-di-GMP在植物有益菌中的作用,特别关注它在趋化性中的作用,生物膜的形成,和结瘤。
    The rhizosphere system of plants hosts a diverse consortium of bacteria that confer beneficial effects on plant, such as plant growth-promoting rhizobacteria (PGPR), biocontrol agents with disease-suppression activities, and symbiotic nitrogen fixing bacteria with the formation of root nodule. Efficient colonization in planta is of fundamental importance for promoting of these beneficial activities. However, the process of root colonization is complex, consisting of multiple stages, including chemotaxis, adhesion, aggregation, and biofilm formation. The secondary messenger, c-di-GMP (cyclic bis-(3\'-5\') dimeric guanosine monophosphate), plays a key regulatory role in a variety of physiological processes. This paper reviews recent progress on the actions of c-di-GMP in plant beneficial bacteria, with a specific focus on its role in chemotaxis, biofilm formation, and nodulation.
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  • 文章类型: Journal Article
    背景:岩溶洞穴作为自然实验室,为生物体提供极端和恒定的条件,促进隔离,导致遗传关系和生活环境与洞穴外的明显不同。然而,研究洞穴生物,尤其是Opiliones,仍然稀缺,大多数研究集中在水,土壤,和洞穴沉积物。
    结果:比较了不同洞穴中共生细菌的结构,揭示了显著的差异。基于α和β的多样性,洞穴中共生细菌的丰度和多样性相似,但是洞穴内外共生细菌的结构不同。洞穴中的微生物在物质循环和能量流动中起着重要作用,特别是在氮循环中。尽管洞穴内外的微生物多样性各不相同,北京洞穴和海南岛的Opiliones表现出强烈的相似性,表明这两种环境具有共同性。
    结论:溶洞环境具有较高的微生物多样性,不同溶洞之间存在明显差异。不同的栖息地导致洞穴内外Opiliones中共生细菌的显着差异,和洞穴微生物已经努力适应极端环境。共生细菌群落结构的相似性表明在宿主环境中存在潜在的相似性,为北部洞穴中的Sinonychiamartensi的出现提供了解释。
    BACKGROUND: Karst caves serve as natural laboratories, providing organisms with extreme and constant conditions that promote isolation, resulting in a genetic relationship and living environment that is significantly different from those outside the cave. However, research on cave creatures, especially Opiliones, remains scarce, with most studies focused on water, soil, and cave sediments.
    RESULTS: The structure of symbiotic bacteria in different caves were compared, revealing significant differences. Based on the alpha and beta diversity, symbiotic bacteria abundance and diversity in the cave were similar, but the structure of symbiotic bacteria differed inside and outside the cave. Microorganisms in the cave play an important role in material cycling and energy flow, particularly in the nitrogen cycle. Although microbial diversity varies inside and outside the cave, Opiliones in Beijing caves and Hainan Island exhibited a strong similarity, indicating that the two environments share commonalities.
    CONCLUSIONS: The karst cave environment possesses high microbial diversity and there are noticeable differences among different caves. Different habitats lead to significant differences in the symbiotic bacteria in Opiliones inside and outside the cave, and cave microorganisms have made efforts to adapt to extreme environments. The similarity in symbiotic bacteria community structure suggests a potential similarity in host environments, providing an explanation for the appearance of Sinonychia martensi in caves in the north.
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  • 文章类型: Journal Article
    秋季粘虫(Spodopterafrugiperda)于2018年12月被发现入侵中国,短短一年,26个省的农作物受到严重影响。目前,紧急控制暴发性害虫的最有效方法是使用化学农药。最近,在中国,大多数秋季粘虫种群开始表现出对chloantraniliprole的低水平抗性。目前,通过检测目标突变和解毒酶活性,无法灵敏地反映出果蔬链球菌的低水平抗性。在这项研究中,我们发现连续12代使用chloantraniliprole进行筛选会导致S.frugiperda对这种杀虫剂产生低水平的抗性,这种表型不归因于S.frugiperda的基因突变,而是共生细菌鞘氨醇单胞菌的相对数量显着增加。使用FISH和qPCR测定,我们确定了S.frugiperda肠道中鞘氨醇单胞菌的数量,发现3龄幼虫中鞘氨醇单胞菌的积累最高。此外,观察到鞘氨醇单胞菌对菊花S.frugiperda提供了对抗氯气菌胁迫的保护作用。随着对氯丁虫抗性的增加,细菌的丰度也增加了,我们建议鞘氨醇单胞菌的监测可以适应作为一个早期预警指数的发展的氯antraniliprole抗性在S.frugiperda种群,这样可以及时采取措施,以延迟或防止对这种非常有用的农用化学品的抗性在S.frugiperda田间种群中的广泛传播。
    The fall armyworm (Spodoptera frugiperda) was found to have invaded China in December 2018, and in just one year, crops in 26 provinces were heavily affected. Currently, the most effective method for emergency control of fulminant pests is to use of chemical pesticides. Recently, most fall armyworm populations in China were begining to exhibite low level resistance to chlorantraniliprole. At present, it is not possible to sensitively reflect the low level resistance of S. frugiperda by detecting target mutation and detoxification enzyme activity. In this study we found that 12 successive generations of screening with chlorantraniliprole caused S. frugiperda to develop low level resistance to this insecticide, and this phenotype was not attribute to genetic mutations in S. frugiperda, but rather to a marked increase in the relative amount of the symbiotic bacteria Sphingomonas. Using FISH and qPCR assays, we determined the amount of Sphingomonas in the gut of S. frugiperda and found Sphingomonas accumulation to be highest in the 3rd-instar larvae. Additionally, Sphingomonas was observed to provide a protective effect to against chlorantraniliprole stress to S. frugiperda. With the increase of the resistance to chlorantraniliprole, the abundance of bacteria also increased, we propose Sphingomonas monitoring could be adapted into an early warning index for the development of chlorantraniliprole resistance in S. frugiperda populations, such that timely measures can be taken to delay or prevent the widespread propagation of resistance to this highly useful agricultural chemical in S. frugiperda field populations.
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  • 文章类型: Journal Article
    啶虫脒是一种广谱的新烟碱类杀虫剂,用于农业防治蚜虫。虽然最近的研究已经证明了几种蚜虫对啶虫脒的抗性,潜在的机制仍未完全理解。在这项研究中,我们分析了豌豆蚜虫实验室菌株的转录组和转录组,Acyrthosiphonpisum(哈里斯,1776),九代暴露后,对啶虫脒的易感性降低,以鉴定参与适应过程的候选基因和微生物组。对选定(RS)和非选定(SS)菌株的转录组进行测序,可以鉴定14,858个基因和4938个新转录本。大多数差异表达的基因与涉及碳和脂肪酸的催化活性和代谢途径有关。具体来说,醇形成脂酰辅酶A还原酶(FAR)和酰基辅酶A合成酶(ACSF2),都参与表皮蜡层成分的合成,在RS中显著上调,这表明对啶虫脒的适应涉及较厚保护层的合成。代谢组学分析揭示了RS微生物组的细微变化。这些结果有助于更深入地了解豌豆蚜虫对啶虫脒的适应性,并为蚜虫控制策略提供新的见解。
    Acetamiprid is a broad-spectrum neonicotinoid insecticide used in agriculture to control aphids. While recent studies have documented resistance to acetamiprid in several aphid species, the underlying mechanisms are still not fully understood. In this study, we analyzed the transcriptome and metatranscriptome of a laboratory strain of the pea aphid, Acyrthosiphon pisum (Harris, 1776), with reduced susceptibility to acetamiprid after nine generations of exposure to identify candidate genes and the microbiome involved in the adaptation process. Sequencing of the transcriptome of both selected (RS) and non-selected (SS) strains allowed the identification of 14,858 genes and 4938 new transcripts. Most of the differentially expressed genes were associated with catalytic activities and metabolic pathways involving carbon and fatty acids. Specifically, alcohol-forming fatty acyl-CoA reductase (FAR) and acyl-CoA synthetase (ACSF2), both involved in the synthesis of epidermal wax layer components, were significantly upregulated in RS, suggesting that adaptation to acetamiprid involves the synthesis of a thicker protective layer. Metatranscriptomic analyses revealed subtle shifts in the microbiome of RS. These results contribute to a deeper understanding of acetamiprid adaptation by the pea aphid and provide new insights for aphid control strategies.
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  • 文章类型: Journal Article
    昆虫的肠道微生物群已经显示出调节宿主解毒酶。然而,所涉及的潜在调节机制尚不清楚.这里,我们报告说,肠道细菌通过激活cap\“n\”颈圈同工型C(CncC)途径,通过酶促产生的活性氧(ROS)在背实菌中增加杀虫剂抗性。我们证明了卡萨利黄肠球菌和乳酸乳球菌,两种产乳酸(LA)的细菌,通过调节细胞色素P450(P450)酶和α-谷胱甘肽S-转移酶(GST)活性来增加背芽孢杆菌对β-氯氰菊酯的抗性。这些肠共生体还诱导了CncC和肌腱膜纤维瘤病(Maf)的表达。BdCncC敲低导致由肠道细菌引起的抗性降低。在抗性菌株(RS)中摄入ROS清除剂维生素C(VC)影响BdCncC/BdKeap1/BdMafK的表达,导致P450和GST活性降低。此外,用E.casseliflavus或乳酸乳球菌喂养表明BdNOX5增加了ROS的产生,和BdNOX5敲低影响BdCncC/BdMafK通路和解毒基因的表达。此外,LA摄食激活了ROS相关的P450和GST活性调节。总的来说,我们的发现表明,共生肠道细菌通过影响生理生化来调节肠道解毒途径,从而为昆虫肠道微生物参与杀虫剂抗性发展提供了新的见解。
    The gut microbiota of insects has been shown to regulate host detoxification enzymes. However, the potential regulatory mechanisms involved remain unknown. Here, we report that gut bacteria increase insecticide resistance by activating the cap \"n\" collar isoform-C (CncC) pathway through enzymatically generated reactive oxygen species (ROS) in Bactrocera dorsalis. We demonstrated that Enterococcus casseliflavus and Lactococcus lactis, two lactic acid-producing bacteria, increase the resistance of B. dorsalis to β-cypermethrin by regulating cytochrome P450 (P450) enzymes and α-glutathione S-transferase (GST) activities. These gut symbionts also induced the expression of CncC and muscle aponeurosis fibromatosis. BdCncC knockdown led to a decrease in resistance caused by gut bacteria. Ingestion of the ROS scavenger vitamin C in resistant strain affected the expression of BdCncC/BdKeap1/BdMafK, resulting in reduced P450 and GST activity. Furthermore, feeding with E. casseliflavus or L. lactis showed that BdNOX5 increased ROS production, and BdNOX5 knockdown affected the expression of the BdCncC/BdMafK pathway and detoxification genes. Moreover, lactic acid feeding activated the ROS-associated regulation of P450 and GST activity. Collectively, our findings indicate that symbiotic gut bacteria modulate intestinal detoxification pathways by affecting physiological biochemistry, thus providing new insights into the involvement of insect gut microbes in the development of insecticide resistance.
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  • 文章类型: Journal Article
    杀虫RNAi是靶向害虫昆虫种群控制措施。从理论上讲,利用宿主范围窄的共生菌传递RNAi可以增强杀虫RNAi的特异性,一种称为共生体介导的RNAi(SMR)的方法,我们以前在全球入侵害虫物种西花Thrips(WFT)中展示过的一项技术。
    在这里,我们研究WFT的两个主要细菌共生体的分布,BFo1和BFo2,在基因组测序的昆虫中。此外,我们用两种细菌挑战了两种非目标昆虫,也就是授粉的欧洲大黄蜂,Bombusterrestris,和WFT的昆虫捕食者,海盗虫子Oriuslaevigatus.
    我们的数据表明,除WFT外,两种共生体在昆虫中的分布非常有限。此外,而BFo1可以在蜜蜂和海盗虫子中建立自己的地位,尽管对昆虫适应性没有显著影响,BFo2无法在任何一个物种中持续存在。
    在生物安全方面,这些数据,连同其更具体的增长要求,证明BFo2用于RNAi的递送和WFT的精确害虫管理的选择。
    UNASSIGNED: Insecticidal RNAi is a targeted pest insect population control measure. The specificity of insecticidal RNAi can theoretically be enhanced by using symbiotic bacteria with a narrow host range to deliver RNAi, an approach termed symbiont-mediated RNAi (SMR), a technology we have previously demonstrated in the globally-invasive pest species Western Flower Thrips (WFT).
    UNASSIGNED: Here we examine distribution of the two predominant bacterial symbionts of WFT, BFo1 and BFo2, among genome-sequenced insects. Moreover, we have challenged two non-target insect species with both bacterial species, namely the pollinating European bumblebee, Bombus terrestris, and an insect predator of WFT, the pirate bug Orius laevigatus.
    UNASSIGNED: Our data indicate a very limited distribution of either symbiont among insects other than WFT. Moreover, whereas BFo1 could establish itself in both bees and pirate bugs, albeit with no significant effects on insect fitness, BFo2 was unable to persist in either species.
    UNASSIGNED: In terms of biosafety, these data, together with its more specific growth requirements, vindicate the choice of BFo2 for delivery of RNAi and precision pest management of WFT.
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  • 文章类型: Journal Article
    背景:研究了铜纳米颗粒(NPs)作为橄榄果蝇(Bactroceraoleae)的替代控制策略的潜力,对拟除虫菊酯溴氰菊酯的敏感性降低,以及纳米和块状铜[Cu(OH)2]对昆虫的生殖和内共生参数的影响。
    结果:通过饲喂施用纳米级和块状铜导致成人死亡率显着水平,与推荐剂量的溴氰菊酯相当或超过溴氰菊酯。Cu-NPs或CuO-NPs与溴氰菊酯的组合显着增强了杀虫剂对B.oleae成虫的效力。当与溴氰菊酯合用时,与对照相比,Cu-NP显着降低了后代的平均总数,以及刺痛的次数,蛹,与单独使用杀虫剂相比,雌性和后代总数。散装和纳米级铜都对内共生细菌Erwiniadacicola的丰度产生负面影响,这对B.oleae幼虫的存活至关重要。
    结论:Cu-NP可以通过减少幼虫的存活和通过增强溴氰菊酯在毒性和减少繁殖力方面的表现来帮助控制油菌,提供有效的抗抗性工具,并通过减少控制害虫所需的剂量来最大程度地减少合成农药的环境足迹。
    BACKGROUND: The potential of copper nanoparticles (Cu-NPs) to be used as an alternative control strategy against olive fruit flies (Bactrocera oleae) with reduced sensitivity to the pyrethroid deltamethrin and the impact of both nanosized and bulk copper hydroxide (Cu(OH)2) on the insect\'s reproductive and endosymbiotic parameters were investigated.
    RESULTS: The application of nanosized and bulk copper applied by feeding resulted in significant levels of adult mortality, comparable to or surpassing those achieved with deltamethrin at recommended doses. Combinations of Cu-NPs or copper oxide nanoparticles (CuO-NPs) with deltamethrin significantly enhanced the insecticide\'s efficacy against B. oleae adults. When combined with deltamethrin, Cu-NPs significantly reduced the mean total number of offspring compared with the control, and the number of stings, pupae, female and total number of offspring compared with the insecticide alone. Both bulk and nanosized copper negatively affected the abundance of the endosymbiotic bacterium Candidatus Erwinia dacicola which is crucial for the survival of B. oleae larvae.
    CONCLUSIONS: The Cu-NPs can aid the control of B. oleae both by reducing larval survival and by enhancing deltamethrin performance in terms of toxicity and reduced fecundity, providing an effective anti-resistance tool and minimizing the environmental footprint of synthetic pesticides by reducing the required doses for the control of the pest. © 2024 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.
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