protein synthesis

蛋白质合成
  • 文章类型: Journal Article
    在受伤的斑马鱼视网膜中,Müller胶质细胞(MG)重新编程以采用视网膜干细胞特性并再生受损的神经元。最强的斑马鱼重编程因子可能是刺激哺乳动物MG类似再生反应的良好候选者。Myc蛋白是有效的重编程因子,可以刺激分化细胞的细胞可塑性;然而,它们在MG重编程和视网膜再生中的作用尚不清楚。在这里,我们报道了视网膜损伤刺激mycb和mych表达,尽管Mycb和Mych都刺激MG重编程和增殖,只有Mych增强视网膜神经元凋亡。Wt的RNAseq分析,mychmut,Mycbmut鱼显示Mycb和Mych调节40%和16%,分别,有助于MG再生相关转录组的基因。在这些基因中,那些被诱导的偏向于调节核糖体生物发生,蛋白质合成,DNA合成,和细胞分裂是受视网膜损伤调节的顶级细胞过程,这表明Mycb和Mych是有效的MG重编程因子。与此一致,这些蛋白质中的任一种的强制表达足以刺激未损伤的视网膜中的MG增殖。
    In the injured zebrafish retina, Müller glial cells (MG) reprogram to adopt retinal stem cell properties and regenerate damaged neurons. The strongest zebrafish reprogramming factors might be good candidates for stimulating a similar regenerative response by mammalian MG. Myc proteins are potent reprogramming factors that can stimulate cellular plasticity in differentiated cells; however, their role in MG reprogramming and retina regeneration remains poorly explored. Here we report that retinal injury stimulates mycb and mych expression and that although both Mycb and Mych stimulate MG reprogramming and proliferation, only Mych enhances retinal neuron apoptosis. RNAseq analysis of Wt, mychmut, and mycbmut fish revealed Mycb and Mych regulate ∼40% and ∼16%, respectively, of the genes contributing to MG\'s regeneration-associated transcriptome. Of these genes, those that are induced are biased towards regulating ribosome biogenesis, protein synthesis, DNA synthesis, and cell division which are the top cellular processes regulated by retinal injury and this suggests Mycb and Mych are potent MG reprogramming factors. Consistent with this, forced expression of either of these proteins is sufficient to stimulate MG proliferation in the uninjured retina.
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  • 文章类型: Journal Article
    背景:认知障碍是唐氏综合症(DS)的核心特征,和潜在的神经生物学机制仍不清楚。翻译失调与以认知障碍为特征的多种神经系统疾病有关。翻译因子真核延伸因子2(eEF2)通过其激酶eEF2K的磷酸化导致一般蛋白质合成的抑制。
    方法:我们使用遗传和药理学方法在两系DS小鼠模型中抑制eEF2K。我们进一步应用多种方法来评估eEF2K抑制对DS病理生理学的影响。
    结果:我们发现DS和DS小鼠模型患者的大脑中eEF2K信号传导过度活跃。通过抑制DS模型小鼠的eEF2K来抑制eEF2磷酸化改善了DS相关病理生理学的多个方面,包括从头蛋白合成缺陷,突触形态缺陷,长期突触可塑性衰竭,和认知障碍。
    结论:我们的数据表明eEF2K信号传导失调介导DS相关的突触和认知障碍。
    结论:唐氏综合征(DS)脑中翻译因子真核延伸因子2(eEF2)的磷酸化增加。eEF2激酶(eEF2K)的抑制减轻DS模型中的认知缺陷。抑制eEF2K改善DS模型中的突触失调。DS模型中的认知和突触损伤由eEF2K抑制剂挽救。
    BACKGROUND: Cognitive impairment is a core feature of Down syndrome (DS), and the underlying neurobiological mechanisms remain unclear. Translation dysregulation is linked to multiple neurological disorders characterized by cognitive impairments. Phosphorylation of the translational factor eukaryotic elongation factor 2 (eEF2) by its kinase eEF2K results in inhibition of general protein synthesis.
    METHODS: We used genetic and pharmacological methods to suppress eEF2K in two lines of DS mouse models. We further applied multiple approaches to evaluate the effects of eEF2K inhibition on DS pathophysiology.
    RESULTS: We found that eEF2K signaling was overactive in the brain of patients with DS and DS mouse models. Inhibition of eEF2 phosphorylation through suppression of eEF2K in DS model mice improved multiple aspects of DS-associated pathophysiology including de novo protein synthesis deficiency, synaptic morphological defects, long-term synaptic plasticity failure, and cognitive impairments.
    CONCLUSIONS: Our data suggested that eEF2K signaling dysregulation mediates DS-associated synaptic and cognitive impairments.
    CONCLUSIONS: Phosphorylation of the translational factor eukaryotic elongation factor 2 (eEF2) is increased in the Down syndrome (DS) brain. Suppression of the eEF2 kinase (eEF2K) alleviates cognitive deficits in DS models. Suppression of eEF2K improves synaptic dysregulation in DS models. Cognitive and synaptic impairments in DS models are rescued by eEF2K inhibitors.
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  • 文章类型: Journal Article
    需要新的治疗方法来治疗尤因肉瘤肿瘤。我们先前确定尤文肉瘤细胞系对抑制蛋白质翻译的药物敏感。然而,在肿瘤中抑制蛋白质合成的翻译和治疗方法是有限的。在这项工作中,我们发现了活性氧,由多种化疗和其他药物产生,抑制蛋白质合成并降低支持尤文肉瘤细胞肿瘤发生的关键蛋白质的水平。特别是,我们发现过氧化氢和金诺芬,硫氧还蛋白还原酶的抑制剂和氧化应激和活性氧的调节剂,激活蛋白质翻译4E-BP1的阻遏物,并降低尤因和其他肉瘤细胞系中致癌蛋白RRM2和PLK1的水平。这些结果提供了对ROS诱导药物如何通过抑制蛋白质翻译靶向癌细胞的机制的新见解,并确定了ROS与DNA复制(RRM2)和细胞周期调节(PLK1)途径之间的机制联系。
    Novel therapeutic approaches are needed for the treatment of Ewing sarcoma tumors. We previously identified that Ewing sarcoma cell lines are sensitive to drugs that inhibit protein translation. However, translational and therapeutic approaches to inhibit protein synthesis in tumors are limited. In this work, we identified that reactive oxygen species, which are generated by a wide range of chemotherapy and other drugs, inhibit protein synthesis and reduce the level of critical proteins that support tumorigenesis in Ewing sarcoma cells. In particular, we identified that both hydrogen peroxide and auranofin, an inhibitor of thioredoxin reductase and regulator of oxidative stress and reactive oxygen species, activate the repressor of protein translation 4E-BP1 and reduce the levels of the oncogenic proteins RRM2 and PLK1 in Ewing and other sarcoma cell lines. These results provide novel insight into the mechanism of how ROS-inducing drugs target cancer cells via inhibition of protein translation and identify a mechanistic link between ROS and the DNA replication (RRM2) and cell cycle regulatory (PLK1) pathways.
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  • 文章类型: Journal Article
    乳腺癌是全球女性患病率最高的癌症类型。骨骼肌萎缩是诊断为乳腺癌的女性的重要预后因素。这种萎缩源于骨骼肌稳态的破坏,由合成代谢信号减弱和炎症加剧引发,最终导致骨骼肌蛋白水解基因表达上调。深入研究骨骼肌萎缩调节剂研究的重要性,如microRNAs(miRNAs),在调节参与骨骼肌蛋白合成和降解的细胞信号通路中起着至关重要的作用,已被认可。这适用于稳态条件以及癌症等病理。然而,在乳腺癌疾病中调节骨骼肌萎缩的特定miRNA的确定尚未被探索。在这篇叙述性评论中,我们的目标是在乳腺癌模型中鉴定可能直接或间接影响骨骼肌萎缩的miRNA,以获得对可能通过抗阻运动训练调节的潜在治疗靶点的最新观点。旨在减轻乳腺癌患者骨骼肌质量的损失。
    Breast cancer is the type of cancer with the highest prevalence in women worldwide. Skeletal muscle atrophy is an important prognostic factor in women diagnosed with breast cancer. This atrophy stems from disrupted skeletal muscle homeostasis, triggered by diminished anabolic signalling and heightened inflammatory conditions, culminating in an upregulation of skeletal muscle proteolysis gene expression. The importance of delving into research on modulators of skeletal muscle atrophy, such as microRNAs (miRNAs), which play a crucial role in regulating cellular signalling pathways involved in skeletal muscle protein synthesis and degradation, has been recognised. This holds true for conditions of homeostasis as well as pathologies like cancer. However, the determination of specific miRNAs that modulate skeletal muscle atrophy in breast cancer conditions has not yet been explored. In this narrative review, we aim to identify miRNAs that could directly or indirectly influence skeletal muscle atrophy in breast cancer models to gain an updated perspective on potential therapeutic targets that could be modulated through resistance exercise training, aiming to mitigate the loss of skeletal muscle mass in breast cancer patients.
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  • 文章类型: Journal Article
    创伤后应激障碍(PTSD)是一种使人衰弱的心身疾病,其特征是大脑恐惧回路受损,并且持续存在抵抗灭绝的异常强烈的联想记忆。在这项研究中,我们研究了抑制蛋白质合成的神经和行为后果,一种已知的抑制传统厌恶记忆形成的过程,在基于上下文恐惧条件的小鼠建立的PTSD动物模型中。对对照动物进行常规的恐惧调节任务。利用c-Fos神经活动映射,我们发现,创伤后应激障碍和正常厌恶记忆的恢复会激活一组重叠的大脑结构.然而,几个具体领域,如脑下皮质和脑室旁丘脑核,与正常厌恶记忆组相比,PTSD组增加。在PTSD诱导前施用蛋白质合成抑制剂破坏了创伤记忆的形成,导致小鼠的行为与通常的厌恶记忆相匹配。伴随这种行为转变的是大脑c-Fos激活模式的正常化,与通常的恐惧记忆中观察到的模式相匹配。我们的发现表明,在创伤经历期间抑制蛋白质合成会显着损害小鼠模型中PTSD的发展。这些数据提供了对蛋白质合成依赖性创伤性记忆形成的神经基础的见解,并为开发PTSD预防的新治疗策略开辟了前景。
    Posttraumatic stress disorder (PTSD) is a debilitating psychosomatic condition characterized by impairment of brain fear circuits and persistence of exceptionally strong associative memories resistant to extinction. In this study, we investigated the neural and behavioral consequences of inhibiting protein synthesis, a process known to suppress the formation of conventional aversive memories, in an established PTSD animal model based on contextual fear conditioning in mice. Control animals were subjected to the conventional fear conditioning task. Utilizing c-Fos neural activity mapping, we found that the retrieval of PTSD and normal aversive memories produced activation of an overlapping set of brain structures. However, several specific areas, such as the infralimbic cortex and the paraventricular thalamic nucleus, showed an increase in the PTSD group compared to the normal aversive memory group. Administration of protein synthesis inhibitor before PTSD induction disrupted the formation of traumatic memories, resulting in behavior that matched the behavior of mice with usual aversive memory. Concomitant with this behavioral shift was a normalization of brain c-Fos activation pattern matching the one observed in usual fear memory. Our findings demonstrate that inhibiting protein synthesis during traumatic experiences significantly impairs the development of PTSD in a mouse model. These data provide insights into the neural underpinnings of protein synthesis-dependent traumatic memory formation and open prospects for the development of new therapeutic strategies for PTSD prevention.
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  • 文章类型: Journal Article
    使用二甲双胍作为治疗延缓衰老的理由主要基于从代谢不健康个体收集的数据。对于健康扩展,二甲双胍也将用于健康时期。了解二甲双胍治疗骨骼肌的潜在背景特异性,我们使用了大鼠模型(高容量跑步者/低容量跑步者[HCR/LCR]),其固有有氧能力存在差异.二甲双胍治疗的结果基于基线内在线粒体功能而有所不同,肌肉的氧化能力(胃与比目鱼肌),和线粒体群体(肌原纤维与肌膜下)。二甲双胍导致LCR中ADP刺激的呼吸降低,HCR的变化较小。然而,二甲双胍的洗脱导致HCRs的呼吸容量意外增加了一倍.呼吸能力的这些改善伴随着线粒体重塑,包括蛋白质合成的增加和形态的变化。我们的发现提出了关于二甲双胍治疗的阳性发现是否广泛适用的问题。
    The rationale for the use of metformin as a treatment to slow aging was largely based on data collected from metabolically unhealthy individuals. For healthspan extension metformin will also be used in periods of good health. To understand the potential context specificity of metformin treatment on skeletal muscle, we used a rat model (high-capacity runner/low-capacity runner [HCR/LCR]) with a divide in intrinsic aerobic capacity. Outcomes of metformin treatment differed based on baseline intrinsic mitochondrial function, oxidative capacity of the muscle (gastroc vs soleus), and the mitochondrial population (intermyofibrillar vs. subsarcolemmal). Metformin caused lower ADP-stimulated respiration in LCRs, with less of a change in HCRs. However, a washout of metformin resulted in an unexpected doubling of respiratory capacity in HCRs. These improvements in respiratory capacity were accompanied by mitochondrial remodeling that included increases in protein synthesis and changes in morphology. Our findings raise questions about whether the positive findings of metformin treatment are broadly applicable.
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  • 文章类型: Journal Article
    转移RNA(tRNA)是修饰程度最高的细胞RNA,无论是关于在tRNA序列中被修饰的核苷酸的比例,还是关于tRNA修饰化学的非凡多样性。然而,许多不同的tRNA修饰的功能才刚刚开始出现。tRNA具有两个一般的修饰簇。第一个簇位于反密码子茎环内,包括蛋白质翻译所必需的几种修饰。第二组修饰在tRNA肘部内,这些修改的作用不太清楚。总的来说,tRNA肘部修饰通常对细胞生长不是必需的,但尽管如此,一些tRNA肘部修饰在生命的所有领域都是高度保守的。除了形成修改,许多tRNA修饰酶已被证明或假设在折叠tRNA时作为tRNA伴侣发挥重要作用。在这次审查中,我们总结了tRNA修饰酶在整个tRNA分子生命周期中的已知功能,从转录到降解。因此,我们描述了tRNA修饰和折叠tRNA修饰酶如何增强tRNA成熟,tRNA氨基酰化,和tRNA在蛋白质合成过程中的功能,最终影响细胞表型和疾病。
    Transfer RNAs (tRNAs) are the most highly modified cellular RNAs, both with respect to the proportion of nucleotides that are modified within the tRNA sequence and with respect to the extraordinary diversity in tRNA modification chemistry. However, the functions of many different tRNA modifications are only beginning to emerge. tRNAs have two general clusters of modifications. The first cluster is within the anticodon stem-loop including several modifications essential for protein translation. The second cluster of modifications is within the tRNA elbow, and roles for these modifications are less clear. In general, tRNA elbow modifications are typically not essential for cell growth, but nonetheless several tRNA elbow modifications have been highly conserved throughout all domains of life. In addition to forming modifications, many tRNA modifying enzymes have been demonstrated or hypothesized to additionally play an important role in folding tRNA acting as tRNA chaperones. In this review, we summarize the known functions of tRNA modifying enzymes throughout the lifecycle of a tRNA molecule, from transcription to degradation. Thereby, we describe how tRNA modification and folding by tRNA modifying enzymes enhance tRNA maturation, tRNA aminoacylation, and tRNA function during protein synthesis, ultimately impacting cellular phenotypes and disease.
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  • 文章类型: Journal Article
    晚期糖基化终产物(AGEs)与几种骨骼肌功能障碍有关。然而,AGEs对骨骼肌的不良影响是否是因为它们对骨骼肌组织的直接作用尚不清楚.因此,这项研究的目的是研究AGEs对骨骼肌的直接和急性影响,使用分离的小鼠骨骼肌,以消除来自其他器官的多种混杂因素。结果表明,将分离的小鼠骨骼肌与AGEs(1mg/mL)孵育2-6h可抑制蛋白质合成和雷帕霉素信号通路的机制靶标。此外,AGEs对蛋白质降解途径显示出潜在的抑制作用,包括自噬和泛素-蛋白酶体系统。此外,AGEs通过调节激活转录因子6,PKR样ER激酶刺激内质网(ER)应激,C/EBP同源蛋白,和改变的炎性细胞因子表达。AGEs还刺激AGEs(RAGE)相关信号分子的受体,包括丝裂原激活的蛋白激酶。这些发现表明,AGEs对骨骼肌有直接和急性的作用,并通过调节细胞内途径如RAGE信号传导来干扰蛋白质平衡。蛋白质合成,蛋白水解,ER压力,和炎性细胞因子。
    Advanced glycation end products (AGEs) have been implicated in several skeletal muscle dysfunctions. However, whether the adverse effects of AGEs on skeletal muscle are because of their direct action on the skeletal muscle tissue is unclear. Therefore, this study aimed to investigate the direct and acute effects of AGEs on skeletal muscle using an isolated mouse skeletal muscle to eliminate several confounders derived from other organs. The results showed that the incubation of isolated mouse skeletal muscle with AGEs (1 mg/mL) for 2-6 h suppressed protein synthesis and the mechanistic target of rapamycin signaling pathway. Furthermore, AGEs showed potential inhibitory effects on protein degradation pathways, including autophagy and the ubiquitin-proteasome system. Additionally, AGEs stimulated endoplasmic reticulum (ER) stress by modulating the activating transcription factor 6, PKR-like ER kinase, C/EBP homologous protein, and altered inflammatory cytokine expression. AGEs also stimulated receptor for AGEs (RAGE)-associated signaling molecules, including mitogen-activated protein kinases. These findings suggest that AGEs have direct and acute effect on skeletal muscle and disturb proteostasis by modulating intracellular pathways such as RAGE signaling, protein synthesis, proteolysis, ER stress, and inflammatory cytokines.
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  • 文章类型: Journal Article
    需要解决影响水果作物的火疫病(FB)的地理传播增加的需求,导致环境基质的大规模化学化和植物生产力的降低。本研究旨在评估不同暴露时间的新型生物制剂对不同抗性水平的苹果和梨品种叶片光合色素含量和抗氧化酶活性的影响。生物修复是从苹果树叶球中分离的含有副干酪乳杆菌M12或解淀粉芽孢杆菌MB40的培养肉汤中配制的。来自抗枯萎病的无菌叶(特有的马蹄莲cv。KG10),中等抗性(Pyruspyrastercv。Wild),和易感(濒临灭绝的驯鹿简历。Aport和Pyruscommuniscv。采用Shygys)品种。在体外研究了生物分离对水果作物抗氧化系统和光合装置的影响。研究结果表明,与易感品种相比,抗FB品种表现出增强的适应性和抗氧化应激能力。植物对生物修复的反应根据植物的初始FB敏感性和暴露持续时间而变化。的确,生物修复改善了同化装置的适应性反应,蛋白质合成,以及易感品种的过氧化氢酶和超氧化物歧化酶活性,这表明生物修复有可能在未来商业化管理水果作物中的FB。
    The need for the increasing geographical spread of fire blight (FB) affecting fruit crops to be addressed led to large-scale chemicalization of the environmental matrices and reduction of plant productivity. The current study aimed to assess the effects of novel biopreparations at different exposure durations on photosynthetic pigment content and antioxidant enzyme activity in leaves of apple and pear varieties with varying levels of resistance to FB. Biopreparations were formulated from a cultural broth containing Lacticaseibacillus paracasei M12 or Bacillus amyloliquefaciens MB40 isolated from apple trees\' phyllosphere. Aseptic leaves from blight-resistant (endemic Malus sieversii cv. KG10), moderately resistant (Pyrus pyraster cv. Wild), and susceptible (endangered Malus domestica cv. Aport and Pyrus communis cv. Shygys) varieties were employed. The impact of biopreparations on fruit crop antioxidant systems and photosynthetic apparatuses was investigated in vitro. Study results indicated that FB-resistant varieties exhibit enhanced adaptability and oxidative stress resistance compared to susceptible ones. Plant response to biopreparations varied based on the plant\'s initial FB sensitivity and exposure duration. Indeed, biopreparations improved the adaptive response of the assimilation apparatus, protein synthesis, and catalase and superoxide dismutase activity in susceptible varieties, suggesting that biopreparations have the potential for future commercialization to manage FB in fruit crops.
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  • 文章类型: Journal Article
    几乎所有的延伸分子tRNA(转移RNA)都在T臂中含有5-甲基尿苷54和假尿苷55,由酶TrmA和TruB产生,分别,在大肠杆菌中。TrmA和TruB都是tRNA分子伴侣,缺乏trmA或truB的菌株优于野生型。这里,我们研究了TrmA和TruB如何促进细胞健康。大肠杆菌中trmA和truB的缺失导致氨基酰化的整体降低并改变其他tRNA修饰如acp3U47。虽然在ΔtrmA和ΔtruB菌株中总体蛋白质合成不受影响,密码子子集的翻译明显受损。因此,我们观察到许多特定蛋白质的翻译表达降低,要么用这些密码子的高频率编码,要么是大蛋白质。由此产生的蛋白质组变化与特定的生长表型无关,但是根据一般的蛋白质合成影响,删除trmA和truB会损害整体细胞适应性。总之,我们证明了tRNAT臂的通用修饰通过增强tRNA成熟对整体tRNA功能至关重要,tRNA氨基酰化,翻译,从而改善细胞适应性,而不考虑生长条件,这解释了trmA和truB的保守性。
    Almost all elongator tRNAs (Transfer RNAs) harbor 5-methyluridine 54 and pseudouridine 55 in the T arm, generated by the enzymes TrmA and TruB, respectively, in Escherichia coli. TrmA and TruB both act as tRNA chaperones, and strains lacking trmA or truB are outcompeted by wild type. Here, we investigate how TrmA and TruB contribute to cellular fitness. Deletion of trmA and truB in E. coli causes a global decrease in aminoacylation and alters other tRNA modifications such as acp3U47. While overall protein synthesis is not affected in ΔtrmA and ΔtruB strains, the translation of a subset of codons is significantly impaired. As a consequence, we observe translationally reduced expression of many specific proteins, that are either encoded with a high frequency of these codons or that are large proteins. The resulting proteome changes are not related to a specific growth phenotype, but overall cellular fitness is impaired upon deleting trmA and truB in accordance with a general protein synthesis impact. In conclusion, we demonstrate that universal modifications of the tRNA T arm are critical for global tRNA function by enhancing tRNA maturation, tRNA aminoacylation, and translation, thereby improving cellular fitness irrespective of the growth conditions which explains the conservation of trmA and truB.
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