nontargeted analysis

非目标分析
  • 文章类型: Journal Article
    加工方法下的茶多酚转化,但缺乏对同一大叶茶品种中它们变化的系统研究。这里,茶树。assamicacv.Yunkang-10叶片经历了六种处理方法,并使用优化的非靶向(UHPLC-Q-ExactiveOrbitrap-MS)和靶向(UHPLC-QqQ-MS)多表型组学进行了评估,以及分子网络分析。903和52多酚化合物(儿茶素,黄酮和黄酮醇,和酚酸)首次分别进行了相对和绝对定量。深色和黑色的茶,多酚含量最低,与其他四种茶不同,尽管这四种茶之间存在差异。然而,一些黄酮醇和黄酮苷元(例如山奈酚,芹菜素),以及一些酚酸(例如鞣花酸,没食子酸),在深色和黑色茶中表现出更高的水平。使用E-舌和E-眼观察了多酚组成与电子感觉特性之间的相关性。这项研究丰富了对不同加工后中国茶叶多酚特征的理解。
    Tea polyphenols transform under processing methods, but a systematic study on their changes in the same large-leaf tea cultivar is lacking. Here, Camellia sinensis var. assamica cv. Yunkang-10 leaves underwent six processing methods and were assessed using optimized nontargeted (UHPLC-Q-Exactive Orbitrap-MS) and targeted (UHPLC-QqQ-MS) polyphenomics, along with molecular networking analysis. 903 and 52 polyphenolic compounds (catechins, flavones and flavonols, and phenolic acids) were respectively relatively and absolutely quantified for the first time. Dark and black teas, with the lowest polyphenol content, differed from the other four tea types, although variations existed among these four teas. However, some flavonol and flavone aglycones (e.g. kaempferol, apigenin), as well as some phenolic acids (e.g. ellagic acid, gallic acid), exhibited higher levels in dark and black teas. Correlations between polyphenolic composition and electronic sensory characteristics were observed using E-tongue and E-eye. This study enriches understanding of polyphenol profiles in Chinese teas post diverse processing.
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  • 文章类型: Journal Article
    母乳中的污染物对于评估母体内部暴露和婴儿外部暴露至关重要。然而,大多数研究都集中在有限范围的污染物上。这里,通过气相色谱四极杆飞行时间质谱分析了来自中国长江三角洲(YRD)三个地区的15个汇总样品(由467个单独样品制备)的母乳。总的来说,初步鉴定了9种类型的171种化合物。其中,16个化合物,包括2,5-二叔丁基对苯二酚和2-叔丁基-1,4-苯醌,首次在人乳中检测到。偏最小二乘判别分析确定了10种特定区域污染物,包括2-萘胺,9-芴酮,2-异丙基硫酮,和苯并[a]芘,在上海收集的人乳样本中(n=3),江苏省(n=6),浙江省(n=6)。计算了风险指数(RI)值,表明传统多环芳烃(PAHs)仅占已识别的PAHs和衍生物的总RI的20%。表明应更加关注具有各种功能基团的PAHs。确定了来自YRD的人乳中的九种优先污染物。最重要的是4-叔戊基苯酚,咖啡因,和2,6-二叔丁基对苯醌,与细胞凋亡有关,氧化应激,和其他健康危害。结果提高了我们评估人乳中污染物带来的健康风险的能力。
    Pollutants in human milk are critical for evaluating maternal internal exposure and infant external exposure. However, most studies have focused on a limited range of pollutants. Here, 15 pooled samples (prepared from 467 individual samples) of human milk from three areas of the Yangtze River Delta (YRD) in China were analyzed by gas chromatography quadrupole time-of-flight mass spectrometry. In total, 171 compounds of nine types were preliminarily identified. Among these, 16 compounds, including 2,5-di-tert-butylhydroquinone and 2-tert-butyl-1,4-benzoquinone, were detected in human milk for the first time. Partial least-squares discriminant analysis identified ten area-specific pollutants, including 2-naphthylamine, 9-fluorenone, 2-isopropylthianthrone, and benzo[a]pyrene, among pooled human milk samples from Shanghai (n = 3), Jiangsu Province (n = 6), and Zhejiang Province (n = 6). Risk index (RI) values were calculated and indicated that legacy polycyclic aromatic hydrocarbons (PAHs) contributed only 20% of the total RIs for the identified PAHs and derivatives, indicating that more attention should be paid to PAHs with various functional groups. Nine priority pollutants in human milk from the YRD were identified. The most important were 4-tert-amylphenol, caffeine, and 2,6-di-tert-butyl-p-benzoquinone, which are associated with apoptosis, oxidative stress, and other health hazards. The results improve our ability to assess the health risks posed by pollutants in human milk.
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  • 文章类型: Journal Article
    4-羟基百菌清(4-OHCHT),百菌清的主要代谢产物和最广泛使用的杀菌剂,在监测过程中经常在人体样本中检测到。与其原型相比,4-OHCHT在环境中可能表现出更高的毒性和持久性。在这项研究中,对来自中国三个省份的540份孕妇血清和母乳样本进行了污染物残留监测.使用超高效液相色谱-高分辨率质谱法分析样品中的4-OHCHT,检出限为20ng/L。这项研究调查了人口因素的影响,比如BMI,居住地区,和教育水平,血清和母乳中4-OHCHT残留的水平。在这三个省份中,血清样本中4-OHCHT的中值浓度最高(1.04×103ng/L),而在湖北和广东观察到母乳样品中4-OHCHT的中位数浓度最高(491ng/L)。多元线性回归分析校正个体特征后血清和母乳中4-OHCHT的显著正相关(p=0.000)。基于此,本研究结合个体TEs和参与者的个人特征,进一步探讨了转移效率(TEs)的影响因素.我们的结果表明,志愿者的年龄和他们的运动习惯对TEs有影响,但需要进一步的研究来确定运动是否会导致TEs的增加。
    4-Hydroxychlorothalonil (4-OH CHT), the main metabolite of chlorothalonil and the most widely used fungicide, has been frequently detected in human samples during monitoring. 4-OH CHT may exhibit higher toxicity and persistence in the environment compared to its prototype. In this study, a total of 540 paired serum and breast milk samples from pregnant women in three provinces in China were monitored for contaminant residues. 4-OH CHT was analyzed in the samples using ultra high-performance liquid chromatography - high-resolution mass spectrometry with a detection limit of 20 ng/L. The study investigated the effects of demographic factors, such as BMI, region of residence, and education level, on the levels of 4-OH CHT residues in serum and breast milk. Among the three provinces, the highest median concentration of 4-OH CHT in serum samples was observed in Hebei (1.04 × 103 ng/L), while the highest median concentration of 4-OH CHT in breast milk samples was observed in Hubei and Guangdong (491 ng/L). Multiple linear regression was used to investigate the significant positive correlation between 4-OH CHT in serum and breast milk (p = 0.000) after adjusting for personal characteristics. Based on this, the study further explored the influencing factors of transfer efficiencies (TEs) in conjunction with the individual TEs and the personal characteristics of the participants. Our results demonstrated that the age of the volunteers and their exercise habits had an effect on TEs, but further studies are needed to determine whether exercise leads to an increase in TEs.
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  • 文章类型: Journal Article
    废水流行病学(WBE)已在世界各地广泛实施,作为常规监测技术的补充工具,以告知和改善公共卫生应对措施。目前,美国的废水监测计划正在评估综合方法,以应对多个领域的公共卫生挑战,包括药物滥用。在这项工作中,我们证明了在线固相萃取与液相色谱-高分辨率质谱联用的潜力,可以支持对精神活性物质和生活方式物质的靶向定量和非靶向分析,这是向了解全州废水监测计划在纽约物质使用评估中的操作可行性迈出的一步.目标筛选确认了从10个污水处理厂收集的进水样品中的39种物质,这些污水处理厂具有不同的污水特征,随着全州计划的规模扩大到满负荷,预计将满足吞吐量需求。非靶标筛选优先考虑在三个置信水平上鉴定的其他化合物,包括精神活性物质,如阿片类镇痛药,苯乙胺,和卡西酮衍生物。尽管反向计算存在不确定性,但在80%以上的废水样品中检测到的12种目标物质的消耗率与先前基于美国的WBE研究报告的消耗率相似。对于选定的物质,消费估计的相对偏差对监测频率的变化敏感,和人类排泄以外的因素(例如,如母体与代谢物之比所示)也可能导致其在下水道规模上的患病率。总的来说,我们的研究标志着完善分析工作流程和数据解释的初始阶段,为将物质使用评估纳入纽约全州废水监测计划做准备。
    Wastewater-based epidemiology (WBE) has been widely implemented around the world as a complementary tool to conventional surveillance techniques to inform and improve public health responses. Currently, wastewater surveillance programs in the U.S. are evaluating integrated approaches to address public health challenges across multiple domains, including substance abuse. In this work, we demonstrated the potential of online solid-phase extraction coupled with liquid chromatography-high-resolution mass spectrometry to support targeted quantification and nontargeted analysis of psychoactive and lifestyle substances as a step toward understanding the operational feasibility of a statewide wastewater surveillance program for substance use assessment in New York. Target screening confirmed 39 substances in influent samples collected from 10 wastewater treatment plants with varying sewershed characteristics and is anticipated to meet the throughput demands as the statewide program scales up to full capacity. Nontarget screening prioritized additional compounds for identification at three confidence levels, including psychoactive substances, such as opioid analgesics, phenethylamines, and cathinone derivatives. Consumption rates of 12 target substances detected in over 80% of wastewater samples were similar to those reported by previous U.S.-based WBE studies despite the uncertainty associated with back-calculations. For selected substances, the relative bias in consumption estimates was sensitive to variations in monitoring frequency, and factors beyond human excretion (e.g., as indicated by the parent-to-metabolite ratios) might also contribute to their prevalence at the sewershed scale. Overall, our study marks the initial phase of refining analytical workflows and data interpretation in preparation for the incorporation of substance use assessment into the statewide wastewater surveillance program in New York.
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  • 文章类型: Journal Article
    通过在消毒之前对实际水样中的天然产物成分进行非目标分析,香豆素被检测为最丰富的化合物之一。更重要的是,腐殖酸的预氯化产生3-羟基香豆素和单羟基单甲基取代的香豆素,总收率≤10.1%,这表明原水中的腐殖质是香豆素的重要来源。7-羟基香豆素,6-羟基-4-甲基香豆素,6,7-二羟基香豆素,和7-甲氧基-4-甲基香豆素在原水中通过高效液相色谱-串联高分辨率质谱鉴定,因为只有一些香豆素标准是市售的。他们的氯化产生了单氯化和多氯香豆素,并且它们的结构被合成标准所证实。这些产品可以在不同剂量的氯和pH水平下形成,一些浓度为600ng/L的自来水可以在自来水中稳定几天。3,6,8-三氯-7-羟基香豆素,3-氯-7-甲氧基-4-甲基香豆素,和3,6-二氯-7-甲氧基-4-甲基香豆素首次在成品水中鉴定,浓度为0.0670、78.1和14.7ng/L,分别,但不是在水源水中,这表明它们是在消毒过程中形成的新DBPs。在TIC-Tox分析中,3-氯-7-甲氧基-4-甲基香豆素在CHO-K1细胞中的细胞毒性与2,6-二溴-1,4-苯醌和2,6-二氯-1,4-苯醌相当,这表明有必要进一步调查它们在饮用水系统中的发生和控制。
    Coumarin was detected as one of the most abundant compounds by nontargeted analysis of natural product components in actual water samples prior to disinfection. More importantly, prechlorination of humic acid generated 3-hydroxycoumarin and monohydroxy-monomethyl-substituted coumarin with a total yield of ≤10.1%, which suggested the humic substance in raw water is an important source of coumarins. 7-Hydroxycoumarin, 6-hydroxy-4-methylcoumarin, 6,7-dihydroxycoumarin, and 7-methoxy-4-methylcoumarin were identified in raw water by high-performance liquid chromatography-tandem high-resolution mass spectrometry because only some coumarin standards were commercially available. Their chlorination generated monochlorinated and polychlorinated coumarins, and their structures were confirmed by the synthesized standards. These products could form at various dosages of chlorine and pH levels, and some with a concentration of 600 ng/L can be stable in tap water for days. 3,6,8-Trichloro-7-hydroxycoumarin, 3-chloro-7-methoxy-4-methylcoumarin, and 3,6-dichloro-7-methoxy-4-methylcoumarin were first identified in finished water with concentrations of 0.0670, 78.1, and 14.7 ng/L, respectively, but not in source water, suggesting that they are new DBPs formed during disinfection. The cytotoxicity of 3-chloro-7-methoxy-4-methylcoumarin in CHO-K1 cells was comparable to those of 2,6-dibromo-1,4-benzoquinone and 2,6-dichloro-1,4-benzoquinone in TIC-Tox analyses, suggesting that further investigation of their occurrence and control in drinking water systems is warranted.
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  • 文章类型: Journal Article
    新兴研究暗示细颗粒物(PM2.5)及其有机成分(OCs)是非吸烟者肺癌进展的紧急危险因素。建立不良结局通路(AOP)导向的非靶向鉴定方法,本研究旨在探讨燃煤地区的PM2.5暴露是否促进肺肿瘤转移,以及我们如何识别其有效的OCs以支持区域PM2.5污染的可追溯性和控制。首先,我们使用裸鼠肺癌模型进行PM2.5暴露,发现暴露显著促进肺组织中A549-Luc细胞的血源性转移和不良结局(AOs),关键事件(KE)包括上皮-间质转化(EMT)标志物表达的变化,如抑制E-cad和增加Fib的表达。随后,使用AOs和KEs作为不利结果总监,我们根据体外模型和非靶向分析确定了总共35种候选化学品.其中,磷酸三丁酯(C12H27O4P),2-溴十八烷(C14H29Br),癸酸甲酯(C11H22O2)对AOs的贡献更大。最后,我们阐明了这些OCs与EMT激活转录因子(EMT-ATFs)之间的相互作用作为分子起始事件(MIE),以支持上述鉴定策略的可行性.本研究更新了一个新的框架,用于识别PM2.5中促进肿瘤转移的OCs,并提供了可靠的数据,用于筛查在污染地区需要优先控制的化学物质,从而导致更高的肺癌风险。
    Emerging studies implicate fine particulate matter (PM2.5) and its organic components (OCs) as urgent hazard factors for lung cancer progression in nonsmokers. Establishing the adverse outcome pathway (AOP)-directed nontargeted identification method, this study aimed to explore whether PM2.5 exposure in coal-burning areas promoted lung tumor metastasis and how we identify its effective OCs to support traceability and control of regional PM2.5 pollution. First, we used a nude mouse model of lung cancer for PM2.5 exposure and found that the exposure significantly promoted the hematogenous metastases of A549-Luc cells in lung tissues and the adverse outcomes (AOs), with key events (KEs) including the changed expression of epithelial-mesenchymal transition (EMT) markers, such as suppression of E-cad and increased expression of Fib. Subsequently, using AOs and KEs as adverse outcome directors, we identified a total of 35 candidate chemicals based on the in vitro model and nontargeted analysis. Among them, tributyl phosphate (C12H27O4P), 2-bromotetradecane (C14H29Br), and methyl decanoate (C11H22O2) made greater contributions to the AOs. Finally, we clarified the interactions between these OCs and EMT-activating transcription factors (EMT-ATFs) as the molecular initiation event (MIE) to support the feasibility of the above identification strategy. The present study updates a new framework for identifying tumor metastasis-promoting OCs in PM2.5 and provides solid data for screening out chemicals that need priority control in polluted areas posing higher lung cancer risk.
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  • 文章类型: Journal Article
    离子迁移谱(IMS)是一种快速气相分离技术,可以根据离子的大小来区分离子,形状,和收费。IMS衍生的碰撞横截面(CCS)可以作为筛选环境有机微污染物(OMP)的附加识别证据。在这项工作中,我们总结了已发表的环境OMPs的实验CCS值,介绍当前的CCS预测工具,总结IMS和CCS在环境OMP分析中的应用,最后讨论了IMS和CCS在环境分析中的优势。通过结合CCS数据库和特定类型的环境OMP的数据集,编制了最新的环境污染物CCS汇编,包括杀虫剂,毒品,霉菌毒素,类固醇,塑料添加剂,全氟烷基和多氟烷基物质(PFAS),多环芳烃(PAHs),多氯联苯(PCBs),和多溴联苯醚(PBDEs),以及他们著名的转型产品。从23种出版物中检索到4170种OMP中的9407种实验CCS值,其中包含氮中的漂移管CCS(DTCCSN2)和氮中的行波CCS(TWCCSN2)。还研究了一系列可公开访问的内部CCS预测工具;训练集涵盖的化学空间和CCS测量的质量似乎是影响CCS预测准确性的重要因素。然后,总结了IMS和衍生的CCS在各种OMP筛选中的应用,以及IMS和CCS的好处,包括增加的峰值容量,消除干扰离子,异构体的分离,减少假阳性和假阴性,进行了详细讨论。随着IMS解析能力的提高和实验CCS数据库的增强,IMS在环境OMP分析中的实用性将不断提高。
    Ion mobility spectrometry (IMS) is a rapid gas-phase separation technique, which can distinguish ions on the basis of their size, shape, and charge. The IMS-derived collision cross section (CCS) can serve as additional identification evidence for the screening of environmental organic micropollutants (OMPs). In this work, we summarize the published experimental CCS values of environmental OMPs, introduce the current CCS prediction tools, summarize the use of IMS and CCS in the analysis of environmental OMPs, and finally discussed the benefits of IMS and CCS in environmental analysis. An up-to-date CCS compendium for environmental contaminants was produced by combining CCS databases and data sets of particular types of environmental OMPs, including pesticides, drugs, mycotoxins, steroids, plastic additives, per- and polyfluoroalkyl substances (PFAS), polycyclic aromatic hydrocarbons (PAHs), polychlorinated biphenyls (PCBs), and polybrominated diphenyl ethers (PBDEs), as well as their well-known transformation products. A total of 9407 experimental CCS values from 4170 OMPs were retrieved from 23 publications, which contain both drift tube CCS in nitrogen (DTCCSN2) and traveling wave CCS in nitrogen (TWCCSN2). A selection of publicly accessible and in-house CCS prediction tools were also investigated; the chemical space covered by the training set and the quality of CCS measurements seem to be vital factors affecting the CCS prediction accuracy. Then, the applications of IMS and the derived CCS in the screening of various OMPs were summarized, and the benefits of IMS and CCS, including increased peak capacity, the elimination of interfering ions, the separation of isomers, and the reduction of false positives and false negatives, were discussed in detail. With the improvement of the resolving power of IMS and enhancements of experimental CCS databases, the practicability of IMS in the analysis of environmental OMPs will continue to improve.
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  • 文章类型: Journal Article
    暴露于环境内分泌干扰化学物质(EDC)可能会导致广泛的健康问题。然而,特定的EDC仍然难以捉摸。这项工作旨在使用ERα蛋白亲和测定法结合高分辨率质谱法对中国主要河流的水源和饮用水中的雌激素受体α(ERα)活性化合物进行非靶向鉴定。鉴定了13个类别的51个潜在的ERα活性化合物。第一次,发现二异癸基苯基磷酸酯具有抗雌激素活性,和三种化学物质(galaxolidone,苄磺隆,和UV234)是合理的ERα配体。在51个鉴定的化合物中,首次在水生环境中检测到12,和N-苯基-2-萘胺的浓度,一种广泛用于橡胶制品的抗氧化剂,水源和饮用水中的浓度高达1469和1190纳克/升,分别。这项研究证明了已知和未知的ERα雌激素和抗雌激素污染物在主要河流中的广泛存在,这些河流是中国饮用水的主要来源,并且在饮用水处理厂中这些化学物质的去除效率很低。
    Exposure to environmental endocrine-disrupting chemicals (EDCs) can cause extensive health issues. However, specific EDCs remain elusive. This work aimed at performing nontargeted identification of estrogen receptor α (ERα)-active compounds using an ERα protein affinity assay combined with high-resolution mass spectrometry in the source and drinking water sampled from major rivers in China. Fifty-one potential ERα-active compounds across 13 categories were identified. For the first time, diisodecyl phenyl phosphate was found to have antiestrogenic activity, and three chemicals (galaxolidone, bensulfuron methyl, and UV234) were plausible ERα ligands. Among the 51 identified compounds, 12 were detected in the aquatic environment for the first time, and the concentration of N-phenyl-2-naphthylamine, a widely used antioxidant in rubber products, was up to 1469 and 1190 ng/L in source and drinking water, respectively. This study demonstrated the widespread presence of known and unknown ERα estrogenic and antiestrogenic pollutants in the major rivers that serve as key sources of drinking water in China and the low removal efficiency of these chemicals in drinking water treatment plants.
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  • 文章类型: Journal Article
    在化学污染越来越严重的环境中,快速表征人类化学暴露(即,在人类中积累的化学混合物)在人口规模上对于了解其对健康的影响至关重要。复杂生物基质的高分辨率质谱(HRMS)分析理论上可以提供化学暴露的全面图像。然而,注释检测到的化学特征,特别是低丰度的,仍然是大规模实施此类方法的重大障碍。我们介绍Scannotation(https://github.com/scannotation/Scannotation_software),一种自动且用户友好的可疑筛查工具,用于快速预注释HRMS预处理数据集。这个软件工具结合了几个MS1化学预测因子,即,m/z,实验和预测的保留时间,同位素模式,和中性损失模式,对特征和嫌疑人之间的接近度进行评分,从而有效地优先考虑试探性注释来验证。Scannotation和MS-DIAL4用于注释75个Breton青少年的血清样品。Scannotation的基于MS1的化学预测因子的组合使我们能够以高置信度注释89种化学上不同的环境化合物(在可用时由MS2确认)。这些化合物包括62%的新兴分子,文献中没有报道毒理学或人类生物监测数据。用MS-DIAL4结果观察到的互补性证明了Scannotation与大规模暴露组学数据集的有效预注释的相关性。
    In an increasingly chemically polluted environment, rapidly characterizing the human chemical exposome (i.e., chemical mixtures accumulating in humans) at the population scale is critical to understand its impact on health. High-resolution mass spectrometry (HRMS) profiling of complex biological matrices can theoretically provide a comprehensive picture of chemical exposures. However, annotating the detected chemical features, particularly low-abundant ones, remains a significant obstacle to implementing such approaches at a large scale. We present Scannotation (https://github.com/scannotation/Scannotation_software), an automated and user-friendly suspect screening tool for the rapid pre-annotation of HRMS preprocessed data sets. This software tool combines several MS1 chemical predictors, i.e., m/z, experimental and predicted retention times, isotopic patterns, and neutral loss patterns, to score the proximity between features and suspects, thus efficiently prioritizing tentative annotations to verify. Scannotation and MS-DIAL4 were used to annotate blood serum samples of 75 Breton adolescents. Scannotation\'s combination of MS1-based chemical predictors allowed us to annotate 89 chemically diverse environmental compounds with high confidence (confirmed by MS2 when available). These compounds included 62% of emerging molecules, for which no toxicological or human biomonitoring data are reported in the literature. The complementarity observed with MS-DIAL4 results demonstrates the relevance of Scannotation for the efficient pre-annotation of large-scale exposomics data sets.
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  • 文章类型: Journal Article
    基于氢/氘(H/D)甲醛的同位素甲基标记与固相萃取和高效液相色谱-高分辨率质谱(HPLC-HRMS)的结合是用于非目标分析的强大分析解决方案。水样中的痕量含氨基化学物质。鉴于HPLC-HRMS分析中产生的大量化学信息,识别所有可能的H/D标记的氨基酸在数据处理中提出了重大挑战。为了解决这个问题,我们设计了一个简化的数据处理管道,可以自动从原始HPLC-HRMS数据中提取H/D标记的氨基化学物质,具有很高的准确性和效率。首先,我们开发了一种互相关算法来校正氘同位素效应导致的保留时间偏移,这实现了H-和D-标记的峰的可靠配对。第二,我们实施了几种生物信息学解决方案,以消除源碎片产生的虚假化学特征,盐加合物,和天然13C同位素。第三,我们使用数据挖掘策略构建了AMINES库,该库由超过38,000种结构分离的伯胺和仲胺组成,以促进推定的化合物注释.最后,我们将这些模块集成到一个免费的R程序中,HDPairFinder.R.每个模块的基本原理都是合理的,并且使用实验H/D标记的化学标准和真实的水样测试了其性能。我们进一步证明了HDPairFinder在有效提取含N污染物中的应用,从而能够监测真实水样中一级和二级N化合物的变化。HDPairFinder是一种可靠的生物信息学工具,用于快速处理基于H/D同位素甲基标记的水样非靶向分析,并将有助于更好地了解水中的含N化合物。
    The combination of hydrogen/deuterium (H/D) formaldehyde-based isotopic methyl labeling with solid-phase extraction and high-performance liquid chromatography-high resolution mass spectrometry (HPLC-HRMS) is a powerful analytical solution for nontargeted analysis of trace-level amino-containing chemicals in water samples. Given the huge amount of chemical information generated in HPLC-HRMS analysis, identifying all possible H/D-labeled amino chemicals presents a significant challenge in data processing. To address this, we designed a streamlined data processing pipeline that can automatically extract H/D-labeled amino chemicals from the raw HPLC-HRMS data with high accuracy and efficiency. First, we developed a cross-correlation algorithm to correct the retention time shift resulting from deuterium isotopic effects, which enables reliable pairing of H- and D-labeled peaks. Second, we implemented several bioinformatic solutions to remove false chemical features generated by in-source fragmentation, salt adduction, and natural 13C isotopes. Third, we used a data mining strategy to construct the AMINES library that consists of over 38,000 structure-disjointed primary and secondary amines to facilitate putative compound annotation. Finally, we integrated these modules into a freely available R program, HDPairFinder.R. The rationale of each module was justified and its performance tested using experimental H/D-labeled chemical standards and authentic water samples. We further demonstrated the application of HDPairFinder to effectively extract N-containing contaminants, thus enabling the monitoring of changes of primary and secondary N-compounds in authentic water samples. HDPairFinder is a reliable bioinformatic tool for rapid processing of H/D isotopic methyl labeling-based nontargeted analysis of water samples, and will facilitate a better understanding of N-containing chemical compounds in water.
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