light response

光响应
  • 文章类型: Journal Article
    色素性视网膜炎是遗传性人类失明的主要原因,并与功能失调的光感受器(PR)有关。与传统方法相比,光电刺激可以更好地保持视网膜的结构完整性和遗传含量。然而,增强刺激的时空准确性具有挑战性。量子点掺杂的ZnIn2S4微花(MF)用于构建具有0D/3D异质结构的仿生光电界面,旨在恢复PR退化小鼠的光反应。MF生物界面具有与天然PR相似的尺寸,并且可以分布在视网膜的弯曲空间区域内,模仿细胞分散。MF的软2D纳米花瓣为光电激活提供了大的比表面积,并模拟了细胞之间的柔性接口。这种生物界面可以选择性地恢复编码亮度的七种类型的视网膜神经节细胞的光响应。反应细胞的分布形成与正常小鼠相似的模式,这可能反映了退化视网膜中初始“神经密码”的产生。膜片钳记录表明,生物界面可以在单神经元水平上诱导尖峰和突触后电流。结果将阐明用于视觉功能恢复的潜在仿生视网膜下假体工具包的开发。
    Retinitis pigmentosa is the main cause of inherited human blindness and is associated with dysfunctional photoreceptors (PRs). Compared with traditional methods, optoelectronic stimulation can better preserve the structural integrity and genetic content of the retina. However, enhancing the spatiotemporal accuracy of stimulation is challenging. Quantum dot-doped ZnIn2S4 microflowers (MF) are utilized to construct a biomimetic photoelectric interface with a 0D/3D heterostructure, aiming to restore the light response in PR-degenerative mice. The MF bio interface has dimensions similar to those of natural PRs and can be distributed within the curved spatial region of the retina, mimicking cellular dispersion. The soft 2D nano petals of the MF provide a large specific surface area for photoelectric activation and simulate the flexibility interfacing between cells. This bio interface can selectively restore the light responses of seven types of retina ganglion cells that encode brightness. The distribution of responsive cells forms a pattern similar to that of normal mice, which may reflect the generation of the initial \"neural code\" in the degenerative retina. Patch-clamp recordings indicate that the bio interface can induce spiking and postsynaptic currents at the single-neuron level. The results will shed light on the development of a potential bionic subretinal prosthetic toolkit for visual function restoration.
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  • 文章类型: Journal Article
    哺乳动物视网膜中表达的机械敏感通道是压力升高的效应物,但目前尚不清楚它们的激活如何影响压力相关视网膜疾病的视觉功能。
    这项研究通过免疫组织化学研究了瞬时电位通道香草酸TRPV4在光感受器和杆状双极细胞(RBC)中的作用,共聚焦显微镜,视网膜电图(ERG),和膜片钳技术。
    在光感受器的外部片段中发现了TRPV4免疫反应性(IR),PKCα阳性红细胞和其他BCs的树突和体细胞,丛状层,和野生型小鼠中的视网膜神经节细胞(RGC)。TRPV4-IR在纯合TRPV4转基因小鼠的视网膜中大大减少。在完全黑暗适应的条件下,与野生型小鼠相比,遗传抑制TRPV4的表达适度但显着增强了暗视和中视光(0.55至200Rh*rod-1s-1s-1)和明视光(105-106Rh*rod-1s-1)诱发的ERGa和b波的振幅。在转基因小鼠中,b波显着减少了昏暗光引起的隐含时间(0.55至200Rh*rod-1s-1),而a波则延长了。暗光诱发的ERGb波主要由红细胞介导,在电压钳位条件下,与野生型小鼠相比,转基因小鼠红细胞中光诱发阳离子电流的潜伏期明显缩短.大约10%的转基因小鼠一只眼睛未发育,并且该百分比显著高于野生型小鼠。
    数据表明,TRPV4涉及眼部发育,在视网膜外神经元中表达并活跃,TRPV4的干预可以可变地影响棒中的视觉信号,锥体,红细胞,和锥体在BCs上。
    UNASSIGNED: Mechanical sensitive channels expressed in mammalian retinas are effectors of elevated pressure stresses, but it is unclear how their activation affects visual function in pressure-related retinal disorders.
    UNASSIGNED: This study investigated the role of the transient potential channel vanilloid TRPV4 in photoreceptors and rod bipolar cells (RBCs) with immunohistochemistry, confocal microscopy, electroretinography (ERG), and patch-clamp techniques.
    UNASSIGNED: TRPV4 immunoreactivity (IR) was found in the outer segments of photoreceptors, dendrites and somas of PKCα-positive RBCs and other BCs, plexiform layers, and retinal ganglion cells (RGCs) in wild-type mice. TRPV4-IR was largely diminished in the retinas of homozygous TRPV4 transgenic mice. Genetically suppressing TRPV4 expression moderately but significantly enhanced the amplitude of ERG a- and b-waves evoked by scotopic and mesopic lights (0.55 to 200 Rh*rod-1 s-1) and photopic lights (105-106 Rh*rod-1 s-1) compared to wild-type mice in fully dark-adapted conditions. The implicit time evoked by dim lights (0.55 to 200 Rh*rod-1 s-1) was significantly decreased for b-waves and elongated for a-waves in the transgenic mice. ERG b-wave evoked by dim lights is primarily mediated by RBCs, and under voltage-clamp conditions, the latency of the light-evoked cation current in RBCs of the transgenic mice was significantly shorter compared to wild-type mice. About 10% of the transgenic mice had one eye undeveloped, and the percentage was significantly higher than in wild-type mice.
    UNASSIGNED: The data indicates that TRPV4 involves ocular development and is expressed and active in outer retinal neurons, and interventions of TRPV4 can variably affect visual signals in rods, cones, RBCs, and cone ON BCs.
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  • 文章类型: Journal Article
    根据环境变量预测全球变化缓解措施,比如温度和水的可用性,虽然产生有见地的假设仍然缺乏环境反应的整合。应评估生理极限,以获得物种基本生态位的完整代表。很少有关于树木沿纬度梯度响应的详细生态生理学研究。他们可以阐明在不同光强度和其他研究特征下的行为。Dinaric山脉和喀尔巴士山脉的森林代表了东南欧最大的连续森林综合体。在年龄不均匀的喀尔巴师(8块)和迪纳里山(11块)森林中,根据通过分析管理和旧生长森林的半球形照片获得的间接场地因子(ISF%),在三个预定义的光强度类别中测量了山毛榉和杉木的净同化(Amax)和最大量子产率(Φ)。所有位于800ma.s.l.测量是在固定的环境条件下连续三年在每个地块的每个光照类别中进行的。来自CRUTS4.01数据集的过去50年平均期间的数据用于比较Amax,Φ,和气候。在Dinaric山脉的中部以及喀尔巴壁山脉的最西南和最西北的部分观察到山毛榉和冷杉的最高Φ,而在研究区域最西北的迪纳里山脉,冷杉的冷杉最高。随着年平均温度的升高,两种复合物中山毛榉的Φ值都降低,在开阔的景观中最高。对于喀尔巴斯山脉的冷杉来说,Φ随着年平均气温的升高而降低,而在Dinaric山脉,它随着温度的升高而升高,并且与喀尔巴士山脉相比表现出更分散的响应。山毛榉和冷杉的短期生态生理反应与在同一位置观察到的长期径向生长观察结果一致。研究结果可能为两个树种在其生物地理范围内对气候变化的竞争力方面的未来响应提供基础和指示,存在,进而导致森林管理决策。
    Predicting global change mitigations based on environmental variables, like temperature and water availability, although yielding insightful hypothesis still lacks the integration of environmental responses. Physiological limits should be assessed to obtain a complete representation of a species\' fundamental niche. Detailed ecophysiological studies on the response of trees along the latitudinal gradient are rare. They could shed light on the behaviour under different light intensities and other studied traits. The forests of the Dinaric Mountains and the Carpathians represent the largest contiguous forest complexes in south-eastern Europe. In uneven-aged Carpathian (8 plots) and Dinaric Mountain (11 plots) forests, net assimilation (Amax) and maximum quantum yield (Φ) were measured for beech and fir in three predefined light intensity categories according to the indirect site factor (ISF%) obtained by the analysis of hemispherical photographs in managed and old growth forests, all located above 800 m a.s.l. The measurements were carried out under fixed environmental conditions in each light category per plot for three consecutive years. Data from the last 50-year average period from the CRU TS 4.01 dataset were used for the comparison between Amax, Φ, and climate. The highest Φ for beech were observed in the central part of the Dinaric Mountains and in the south westernmost and northwesternmost part of the Carpathians for both beech and fir, while they were highest for fir in the Dinaric Mountains in the northwesternmost part of the study area. The Φ-value of beech decreased in both complexes with increasing mean annual temperature and was highest in the open landscape. For fir in the Carpathians, Φ decreased with increasing mean annual temperature, while in the Dinaric Mountains it increased with higher temperature and showed a more scattered response compared to the Carpathians. Short-term ecophysiological responses of beech and fir were consistent to long-term radial growth observations observed on same locations. The results may provide a basis and an indication of the future response of two tree species in their biogeographical range to climate change in terms of competitiveness, existence and consequently forest management decisions.
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  • 文章类型: Journal Article
    高级染色质结构对于基因表达的调节至关重要。在植物中,光深刻地影响新兴幼苗的形态发生以及全球基因表达,以确保对环境条件的最佳适应。然而,在幼苗发育过程中,染色质组织响应光的变化和功能意义尚不清楚。我们为子叶构建了Hi-C接触图,大豆的顶端钩和下胚轴受到黑暗和光照条件的影响。由此产生的高分辨率Hi-C接触图确定了染色体区域,A/B舱,A/B子隔间,每个器官中的TAD(拓扑关联域)和染色质环。我们观察到在光照下染色质压缩增加,并且我们发现在光照下从B子区室切换到A子区室的结构域包含在光形态发生过程中被激活的基因。在局部尺度上,我们确定了一组由不同数量的小生长素上调RNA(SAURs)组成的基因簇构建的TADs,响应光刺激,在钩和下胚轴中表现出严格的共表达。在下胚轴,RNA聚合酶II(RNAPII)通过TAD缩合在光照下调节SAURs簇的转录。我们的结果表明,3D基因组以组织特异性方式参与光相关基因表达的调节。
    Higher-order chromatin structure is critical for regulation of gene expression. In plants, light profoundly affects the morphogenesis of emerging seedlings as well as global gene expression to ensure optimal adaptation to environmental conditions. However, the changes and functional significance of chromatin organization in response to light during seedling development are not well documented. We constructed Hi-C contact maps for the cotyledon, apical hook and hypocotyl of soybean subjected to dark and light conditions. The resulting high-resolution Hi-C contact maps identified chromosome territories, A/B compartments, A/B sub-compartments, TADs (Topologically Associated Domains) and chromatin loops in each organ. We observed increased chromatin compaction under light and we found that domains that switched from B sub-compartments in darkness to A sub-compartments under light contained genes that were activated during photomorphogenesis. At the local scale, we identified a group of TADs constructed by gene clusters consisting of different numbers of Small Auxin-Upregulated RNAs (SAURs), which exhibited strict co-expression in the hook and hypocotyl in response to light stimulation. In the hypocotyl, RNA polymerase II (RNAPII) regulated the transcription of a SAURs cluster under light via TAD condensation. Our results suggest that the 3D genome is involved in the regulation of light-related gene expression in a tissue-specific manner.
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  • 文章类型: Journal Article
    生物污染的形成过程实际上是一个具有空间和时间维度的4D过程。然而,大多数传统的防污涂料,包括光滑的液体注入多孔表面(SLIPS),仅限于在2D涂层平面中执行防污工艺。在这里,受到海葵挥舞着有毒触手的防御行为的启发,“4DSLIPS”(FSLIPS)是通过磁场自组装方法用仿生纤毛构建的,用于防污。仿生纤毛在外部磁场的驱动下在3D空间中移动,从而防止微生物的附着。FSLIPS响应光在1D时间释放气体防污剂(一氧化氮),从而实现对微生物的可控杀生物剂效果。FSLIPS通过外部磁场调节纤毛的运动,并通过光响应控制NO超时的释放,以便在白天或晚上根据需要调整防污模式。光/磁响应机制赋予FSLIPS在一维时间和三维空间的4D维中调节防污效果的能力,有效地实现智能,防污工艺的多维性和精确性。
    The formation process of biofouling is actually a 4D process with both spatial and temporal dimensions. However, most traditional antifouling coatings, including slippery liquid-infused porous surface (SLIPS), are limited to performing antifouling process in the 2D coating plane. Herein, inspired by the defensive behavior of sea anemones\' wielding toxic tentacles, a \"4D SLIPS\" (FSLIPS) is constructed with biomimetic cilia via a magnetic field self-assembly method for antifouling. The bionic cilia move in 3D space driven by an external magnetic field, thereby preventing the attachment of microorganisms. The FSLIPS releases the gaseous antifoulant (nitric oxide) at 1D time in response to light, thereby achieving a controllable biocide effect on microorganisms. The FSLIPS regulates the movement of cilia via the external magnetic field, and controls the release of NO overtime via the light response, so as to adjust the antifouling modes on demand during the day or night. The light/magnetic response mechanism endow the FSLIPS with the ability to adjust the antifouling effect in the 4D dimension of 1D time and 3D space, effectively realizing the intelligence, multi-dimensionality and precision of the antifouling process.
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  • 文章类型: Journal Article
    丝状子囊里氏木霉,以其丰富的纤维素分解酶生产而闻名,最近也因其次生代谢产物的合成而受到关注。这两个过程都受到环境因素的复杂影响,例如碳源的可用性和光照。这里,我们从基因调控方面探讨了转录因子STE12在调节里氏木霉代谢途径中的作用,碳源利用和次生代谢产物的生物合成。我们表明,STE12参与调节纤维素酶基因的表达和与铁稳态相关的碳源的生长。STE12以光依赖的方式影响纤维素的基因调控,并调节几种CAZyme编码基因以及参与次生代谢的基因。STE12选择性地影响山梨糖醇的生物合成,而不影响生物合成的生物合成,最近显示受信号级联中STE12上游的MAP激酶途径调节。我们进一步报道了里氏木霉中脱氢乙酸(DHAA)的生物合成,一种以抗菌特性而闻名的化合物,受STE12的监管。我们得出结论,STE12发挥超出开发的功能,因此有助于平衡衬底消耗之间的能量分布,繁殖和防御。
    The filamentous ascomycete Trichoderma reesei, known for its prolific cellulolytic enzyme production, recently also gained attention for its secondary metabolite synthesis. Both processes are intricately influenced by environmental factors like carbon source availability and light exposure. Here, we explore the role of the transcription factor STE12 in regulating metabolic pathways in T. reesei in terms of gene regulation, carbon source utilization and biosynthesis of secondary metabolites. We show that STE12 is involved in regulating cellulase gene expression and growth on carbon sources associated with iron homeostasis. STE12 impacts gene regulation in a light dependent manner on cellulose with modulation of several CAZyme encoding genes as well as genes involved in secondary metabolism. STE12 selectively influences the biosynthesis of the sorbicillinoid trichodimerol, while not affecting the biosynthesis of bisorbibutenolide, which was recently shown to be regulated by the MAPkinase pathway upstream of STE12 in the signaling cascade. We further report on the biosynthesis of dehydroacetic acid (DHAA) in T. reesei, a compound known for its antimicrobial properties, which is subject to regulation by STE12. We conclude, that STE12 exerts functions beyond development and hence contributes to balance the energy distribution between substrate consumption, reproduction and defense.
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  • 文章类型: Journal Article
    抗坏血酸(维生素C)是植物中最丰富的初级代谢产物之一。其复杂的化学性质使其能够起到抗氧化剂的作用,自由基清除剂和铁和铜的还原剂。在绿色植物中通过甘露糖/L-半乳糖途径发生抗坏血酸生物合成,并回顾了该途径是主要途径的证据。抗坏血酸的积累是叶子对光的反应,反映光保护的各种作用。GDP-L-半乳糖磷酸化酶(GGP)是该途径中的第一个专用步骤,在控制抗坏血酸合成中很重要。其表达由转录和翻译的组合决定。翻译由上游开放阅读框(uORF)控制,该开放阅读框阻止主要GGP编码序列的翻译,可能以依赖抗坏血酸的方式。GGP与PAS-LOV蛋白结合,抑制其活性和解离是由蓝光诱导。虽然低抗坏血酸突变体易受氧化应激,它们几乎正常生长。相比之下,缺乏抗坏血酸的突变体不会生长,除非通过补充来拯救。进一步的研究应研究抗坏血酸在严重缺乏植物中的可能基础功能,包括防止2-酮戊二酸依赖性双加氧酶中铁的过度氧化和种子发育和发芽过程中的铁动员。
    Ascorbate (vitamin C) is one of the most abundant primary metabolites in plants. Its complex chemistry enables it to function as an antioxidant, as a free radical scavenger, and as a reductant for iron and copper. Ascorbate biosynthesis occurs via the mannose/l-galactose pathway in green plants, and the evidence for this pathway being the major route is reviewed. Ascorbate accumulation is leaves is responsive to light, reflecting various roles in photoprotection. GDP-l-galactose phosphorylase (GGP) is the first dedicated step in the pathway and is important in controlling ascorbate synthesis. Its expression is determined by a combination of transcription and translation. Translation is controlled by an upstream open reading frame (uORF) which blocks translation of the main GGP-coding sequence, possibly in an ascorbate-dependent manner. GGP associates with a PAS-LOV protein, inhibiting its activity, and dissociation is induced by blue light. While low ascorbate mutants are susceptible to oxidative stress, they grow nearly normally. In contrast, mutants lacking ascorbate do not grow unless rescued by supplementation. Further research should investigate possible basal functions of ascorbate in severely deficient plants involving prevention of iron overoxidation in 2-oxoglutarate-dependent dioxygenases and iron mobilization during seed development and germination.
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  • 文章类型: Journal Article
    在脊椎动物的视网膜上,几十个平行通道将视觉世界的信息传递给大脑。这些通道由不同类型的视网膜神经节细胞(RGCs)代表,其响应通过各种机制对不同的视觉特征集进行选择性渲染。这些机制可以大致分为突触相互作用和细胞内在机制,后者包括树突状形态以及离子通道的互补和分布。这里,我们通过比较两种小鼠RGC类型来研究离子通道补体对RGC输出的影响,良好描述的ONα细胞和很少研究的ON细胞在Igfbp5小鼠品系中被EGFP标记,并且对高对比度的刺激显示出异常的选择性。使用膜片钳记录和计算建模,我们表明,较高的激活阈值和电压门控Na+通道的明显缓慢失活有助于ONIgfbp5RGC的明显对比调谐和瞬态响应,分别。相比之下,在ONα细胞中无法观察到这种机制。这项研究为视网膜处理的最后阶段在塑造RGC反应中可以发挥的强大作用提供了一个例子。
    In the vertebrate retina, several dozens of parallel channels relay information about the visual world to the brain. These channels are represented by the different types of retinal ganglion cells (RGCs), whose responses are rendered selective for distinct sets of visual features by various mechanisms. These mechanisms can be roughly grouped into synaptic interactions and cell-intrinsic mechanisms, with the latter including dendritic morphology as well as ion channel complement and distribution. Here, we investigate how strongly ion channel complement can shape RGC output by comparing two mouse RGC types, the well-described ON alpha cell and a little-studied ON cell that is EGFP-labelled in the Igfbp5 mouse line and displays an unusual selectivity for stimuli with high contrast. Using patch-clamp recordings and computational modelling, we show that a higher activation threshold and a pronounced slow inactivation of the voltage-gated Na+ channels contribute to the distinct contrast tuning and transient responses in ON Igfbp5 RGCs, respectively. In contrast, such a mechanism could not be observed in ON alpha cells. This study provides an example for the powerful role that the last stage of retinal processing can play in shaping RGC responses.
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  • 文章类型: Journal Article
    最广泛使用的异戊二烯排放算法,G93公式,使用基础排放因子以及光和温度依赖性参数估算瞬时叶级异戊二烯排放。G93参数已被建议根据过去的天气情况显示变化,但是没有研究仔细研究过去的气象数据和算法参数之间的关系。这里,为了检查过去天气对这些参数的影响,我们监测了天气状况,G93参数,异戊二烯合酶转录物和蛋白质水平,和MEP途径代谢产物在热带树下12天,并分析了它们与累积温度和光照强度的关系。植物被不同的(上升和下降)光状态照亮,我们以前开发的乒乓优化方法用于参数化G93。过去5天和7天的累积温度与CT2和α呈正相关,分别,而过去10天的累积光照强度与α呈最高负相关。MEP途径代谢物和IspS基因表达的浓度随着累积温度的升高而增加。充其量,过去2天的累积温度与MEP途径代谢产物和IspS基因表达呈正相关,而这些因素与累积光照强度呈双相正相关和负相关。优化的G93在实验开始时很好地捕获了异戊二烯排放的温度和光依赖性;然而,在实验持续时间的后期,其性能显着下降,尤其是下降阶段。通过对上升和下降阶段的单独优化,成功地改善了这一点,强调了配方参数优化和模型改进的重要性。这些结果对异戊二烯排放算法的改进具有重要意义。特别是在未来全球气温上升的预测下。
    The most widely used isoprene emission algorithm, G93 formula, estimates instantaneous leaf-level isoprene emission using the basal emission factor and light and temperature dependency parameters. The G93 parameters have been suggested to show variation depending on past weather conditions, but no study has closely examined the relationship between past meteorological data and the algorithm parameters. Here, to examine the influence of the past weather on these parameters, we monitored weather conditions, G93 parameters, isoprene synthase transcripts and protein levels, and MEP pathway metabolites in the tropical tree Ficus septica for 12 days and analyzed their relationship with cumulative temperature and light intensity. Plants were illuminated with varying (ascending and descending) light regimes, and our previously developed Ping-Pong optimization method was used to parameterize G93. The cumulative temperature of the past 5 and 7 days positively correlated with CT2 and α, respectively, while the cumulative light intensity of the past 10 days showed the highest negative correlation with α. Concentrations of MEP pathway metabolites and IspS gene expression increased with increasing cumulative temperature. At best, the cumulative temperature of the past 2 days positively correlated with the MEP pathway metabolites and IspS gene expression, while these factors showed a biphasic positive and negative correlation with cumulative light intensity. Optimized G93 captured well the temperature and light dependency of isoprene emission at the beginning of the experiment; however, its performance significantly decreased for the latter stages of the experimental duration, especially for the descending phase. This was successfully improved through separate optimization of the ascending and descending phases, emphasizing the importance of the optimization of formula parameters and model improvement. These results have important implications for the improvement of isoprene emission algorithms, particularly under the predicted increase in future global temperatures.
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  • 文章类型: Journal Article
    辐射利用效率(RUE)是一种关键的作物适应性状,它可以量化每单位截获的太阳能作物产生的地上生物量的潜在数量。但目前尚不清楚为什么优良玉米和谷物高粱杂种在作物水平上的RUE不同。这里,我们通过冠层光合作用建模使用了非传统的自上而下的方法来识别叶片水平的光合性状,这些性状是作物水平RUE差异的关键。开发了一种新颖的光合响应测量方法,并结合了贝叶斯模型拟合程序,结合C4叶片光合作用模型,通过同时拟合对CO2的响应来推断光合参数的粘性集,光,和温度。在一系列叶片温度下,发现优良玉米和谷物高粱杂种的叶片光合参数之间存在统计学上的显着差异,特别是对光合作用的量子产率的影响,而且还用于Rubisco和PEPc的最大酶活性。昼夜冠层光合作用的模拟预测,叶片水平光合弱光响应及其温度依赖性是作物水平RUE表现的关键驱动因素,为进一步的生理分析和生物工程应用生成稳定的假设。
    Radiation use efficiency (RUE) is a key crop adaptation trait that quantifies the potential amount of aboveground biomass produced by the crop per unit of solar energy intercepted. But it is unclear why elite maize and grain sorghum hybrids differ in their RUE at the crop level. Here, we used a non-traditional top-down approach via canopy photosynthesis modelling to identify leaf-level photosynthetic traits that are key to differences in crop-level RUE. A novel photosynthetic response measurement was developed and coupled with use of a Bayesian model fitting procedure, incorporating a C4 leaf photosynthesis model, to infer cohesive sets of photosynthetic parameters by simultaneously fitting responses to CO2 , light, and temperature. Statistically significant differences between leaf photosynthetic parameters of elite maize and grain sorghum hybrids were found across a range of leaf temperatures, in particular for effects on the quantum yield of photosynthesis, but also for the maximum enzymatic activity of Rubisco and PEPc. Simulation of diurnal canopy photosynthesis predicted that the leaf-level photosynthetic low-light response and its temperature dependency are key drivers of the performance of crop-level RUE, generating testable hypotheses for further physiological analysis and bioengineering applications.
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