central Africa

中部非洲
  • 文章类型: Journal Article
    粮食不安全(FI)是全球范围内严重的社会经济和公共卫生问题。尤其影响儿童的营养状况和发育。这项横断面研究旨在评估圣多美和普林西比(STP)Cantagalo区儿童和青少年营养不足的患病率,在中非。它还评估了他们的家庭\'FI状况,并检查了社会人口统计学,人体测量学,和与严重FI相关的营养特征。数据包括546名儿童/青少年(51.8%为男性,9-15岁)来自八所公立基础教育学校。一份结构化问卷提供了社会人口统计数据,而人体测量评估营养状况。饮食摄入量数据是使用单一的24小时饮食回忆收集的,使用2.0版的摄入分布估计PC软件(PC-SIDE®)获得调整后的营养不足发生率。家庭食品不安全获取量表用于评估FI,家庭被归类为严重或非严重的粮食不安全。校正潜在混杂因素的多变量二元逻辑回归模型确定了与FI相关的因素。34.1%的参与者表现出儿童/青少年瘦弱,超过95%的人缺乏必需的微量营养素,包括铁。值得注意的是,73.7%的人严重粮食不安全。较高的FI严重程度与较低的铁摄入量和某些家庭头部特征呈正相关。比如女性或老年,并与拥有家庭花园产生负面影响。
    Food insecurity (FI) is a critical socioeconomic and public health problem globally, particularly affecting children\'s nutritional status and development. This cross-sectional study aimed to assess the prevalence of nutritional inadequacy among children and adolescents in the Cantagalo district of São Tomé and Príncipe (STP), in Central Africa. It also assessed their households\' FI situation and examined sociodemographic, anthropometric, and nutritional characteristics associated with severe FI. Data included 546 children/adolescents (51.8% males, aged 9-15 years) from the eight public basic education schools. A structured questionnaire provided sociodemographic data, while anthropometric measurements assessed nutritional status. Dietary intake data were gathered using a single 24 h dietary recall, and the adjusted prevalences of nutritional inadequacy were obtained using version 2.0 of the PC-Software for Intake Distribution Estimation (PC-SIDE®). The Household Food Insecurity Access Scale was used to assess FI, and households were classified as severely or non-severely food insecure. Multivariable binary logistic regression models adjusted for potential confounders identified factors related to FI. Children\'s/adolescents\' thinness was exhibited in 34.1% of participants, and over 95% had inadequate intake of essential micronutrients, including iron. Notably, 73.7% were severely food insecure. A higher severity of FI was positively associated with a lower intake of iron and certain household head characteristics, such as being female or older, and negatively associated with having a home garden.
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  • 文章类型: Journal Article
    白纹伊蚊(Skuse,1894),一种起源于亚洲的蚊子,自2000年代以来一直被引入非洲。蚊子不仅令人讨厌,而且能够传播各种虫媒病毒。本研究总结了我们2000年至2016年在圣多美和普林西比民主共和国进行的昆虫学调查。成年蚊子被扫网收集,人类着陆捕获,和疾病控制中心(CDC)的光陷阱,从15个哨点的充满水的栖息地收集不成熟的物种,并将其饲养到成年。根据形态特征进行物种鉴定。对于在普林西比收集的蚊子,扩增了细胞色素C氧化酶亚基I(COI)和Wolbachia表面蛋白(wsp)基因的片段。报告了四种蚊子的新记录。白纹伊蚊在2015年被发现。发现幼虫分布在全国各地,主要放在人工盛水容器中(488/2698,占18.1%)。在普林西比的旧轮胎中观察到最高的阳性率(114/250,45.6%)。线粒体DNA分析显示入侵种群之间的遗传多样性低,但所有测试标本都被Wolbachia感染了.Ae的能力。白纹伊蚊适应新环境及其在疾病传播中的参与使得对该物种的监测和控制尤为重要。
    Aedes albopictus (Skuse, 1894), a mosquito originating in Asia, has been introduced to Africa since the 2000s. The mosquito is not only a nuisance but is capable of transmitting various arboviruses. The current study summarized our entomological surveys in the Democratic Republic of Sao Tome and Principe during 2000 to 2016. Adult mosquitoes were collected by sweep nets, human landing catches, and Centers for Disease Control (CDC) light traps, and the immatures were collected from water-filled habitats at 15 sentinel sites and reared to adulthood. Species identification was performed based on morphologic characteristics. Fragments of the cytochrome C oxidase subunit I (COI) and the Wolbachia surface protein (wsp) genes were amplified for mosquitoes collected in Principe. New records of four mosquito species were reported. Aedes albopictus was identified in 2015. The larvae were found distributed over the nation and were predominately in artificial water-holding containers (488/2698, 18.1%). The highest positive rate was observed in used tires in Príncipe (114/250, 45.6%). Mitochondrial DNA analysis revealed low genetic diversity among the invasive populations, but all tested specimens were superinfected by Wolbachia. The ability of Ae. albopictus to adapt to new environments and its involvement in disease transmission make the surveillance and control of this species particularly important.
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  • 文章类型: Journal Article
    背景:埃博拉病毒(EBOV)和苏丹病毒(SUDV)是造成中部和西部非洲人类致命出血热爆发的原因,以及可能是EBOV人类爆发源头的猿类。
    方法:为了评估通过与非人类灵长类动物(NHP)接触而暴露于正病毒的风险,我们在喀麦隆森林地区NHP叮咬的病例对照研究中,使用基于微球的多重免疫测定法测试了针对不同病毒蛋白的抗体的存在(n=795),以及来自同一国家其他农村人口(n=622)的横断面调查。
    结果:在13%和12%的EBOV和SUDV样品中检测到针对至少两种病毒蛋白的血清反应性,分别。血清反应性的概率与NHP咬伤史无关,但是俾格米人比班图斯高三倍。尽管在选定的一系列高反应性样品中未检测到针对EBOV和SUDV的中和抗体,亲和力结果表明对SUDV抗原有很强的亲和力。
    结论:在喀麦隆农村地区没有爆发疫情的地区,检测到了高水平的正牛病毒血清反应性,提高了正博拉病毒沉默循环的可能性,或其他尚未记录的丝状病毒,在这些森林地区。
    BACKGROUND: Ebola (EBOV) and Sudan (SUDV) orthoebolaviruses are responsible for lethal haemorrhagic fever outbreaks in humans in Central and West Africa, and in apes that can be at the source of human outbreaks for EBOV.
    METHODS: To assess the risk of exposure to orthoebolaviruses through contact with non-human primates (NHP), we tested the presence of antibodies against different viral proteins with a microsphere-based multiplex immunoassay in a case-control study on bites from NHPs in forest areas from Cameroon (n=795), and in cross-sectional surveys from other rural populations (n=622) of the same country.
    RESULTS: Seroreactivities against at least two viral proteins were detected in 13% and 12% of the samples for EBOV and SUDV, respectively. Probability of seroreactivity was not associated with history of NHP bites, but was three times higher in Pygmies compared to Bantus. Although no neutralizing antibodies to EBOV and SUDV were detected in a selected series of highly reactive samples, avidity results indicate strong affinity to SUDV antigens.
    CONCLUSIONS: The detection of high level of seroreactivities against orthoebolaviruses in rural Cameroon where no outbreaks have been reported, raises the possibilities of silent circulation of orthoebolavirus, or of other not yet documented filoviruses, in these forested regions.
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  • 文章类型: Journal Article
    亚马逊之后,刚果盆地是世界第二大热带雨林地区。这个盆地拥有非凡的生物多样性,然而其水域中的许多微生物多样性,土壤,人口在很大程度上仍未被探索和发现。虽然正在采取许多举措来表征全球生物多样性,很少在非洲进行,没有一个涉及刚果盆地,特别是在城市地区。在这种情况下,我们评估了黑角城市排水沟中存在的微生物多样性,刚果。这个小镇具有有趣的特点,因为人口密度很高,它位于大西洋和中非的Mayombe森林之间。这些发现阐明了黑角地表水的微生物组成。该数据集允许通过81个元基因组组装的基因组的组装来鉴定推定的新细菌。它也是评估抗生素抗性基因存在的宝贵的主要资源,为公共卫生当局监测风险提供了一个有用的工具。
    After Amazonia, the Congo Basin represents the second-largest tropical rainforest area in the world. This basin harbours remarkable biodiversity, yet much of its microbiological diversity within its waters, soils, and populations remains largely unexplored and undiscovered. While many initiatives to characterize global biodiversity are being undertaken, few are conducted in Africa and none of them concern the Congo Basin specifically in urban areas. In this context, we assessed the microbial diversity present in gutter water in the city of Pointe-Noire, Congo. This town has interesting characteristics as the population density is high and it is located between the Atlantic Ocean and the forest of Mayombe in Central Africa. The findings illuminate the microbial composition of surface water in Pointe-Noire. The dataset allows the identification of putative new bacteria through the assembly of 81 meta-genome-assembled genomes. It also serves as a valuable primary resource for assessing the presence of antibiotic-resistant genes, offering a useful tool for monitoring risks by public health authorities.
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  • 文章类型: Journal Article
    由恶性疟原虫引起的疟疾是最致命和最常见的热带传染病之一。然而,与寄生虫Pfk13基因相关的青蒿素耐药性的出现,威胁到各个国家的公共健康以及目前在全球范围内减轻疟疾负担的努力。令人关切的是,抗青蒿素的寄生虫可能被选择或已经在非洲出现。这篇叙述性综述旨在评估已发表的关于验证的证据,候选人,和十个中非国家的新Pfk13多态性。结果表明,四个验证的非同义多态性(M476I,R539T,P553L,和P574L),与延迟治疗反应直接相关,据报道,该地区。此外,已经报道了两个与青蒿素耐药相关但未经验证的Pfk13多态性(C469F和P527H)。此外,在中非观察到了一些未经验证的突变,和一个等位基因A578S,常见于不同的国家,尽管需要更多的分子和生化研究来研究这些突变是否会改变青蒿素的作用。这些信息是在Pfk13的生化和遗传方面进行讨论的,与中非国家的区域疟疾流行病学有关。
    Malaria caused by Plasmodium falciparum is one of the deadliest and most common tropical infectious diseases. However, the emergence of artemisinin drug resistance associated with the parasite\'s Pfk13 gene, threatens the public health of individual countries as well as current efforts to reduce malaria burdens globally. It is of concern that artemisinin-resistant parasites may be selected or have already emerged in Africa. This narrative review aims to evaluate the published evidence concerning validated, candidate, and novel Pfk13 polymorphisms in ten Central African countries. Results show that four validated non-synonymous polymorphisms (M476I, R539T, P553L, and P574L), directly associated with a delayed therapy response, have been reported in the region. Also, two Pfk13 polymorphisms associated to artemisinin resistance but not validated (C469F and P527H) have been reported. Furthermore, several non-validated mutations have been observed in Central Africa, and one allele A578S, is commonly found in different countries, although additional molecular and biochemical studies are needed to investigate whether those mutations alter artemisinin effects. This information is discussed in the context of biochemical and genetic aspects of Pfk13, and related to the regional malaria epidemiology of Central African countries.
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  • 文章类型: Journal Article
    背景:在赤道几内亚,只有54%的艾滋病毒感染者知道自己的艾滋病毒状况。该国没有用于早期诊断或监测感染的确认或分子诊断技术。如果将快速诊断测试用作确认技术,则可以引起假阳性诊断。我们的研究旨在通过分析假阳性诊断率来确定赤道几内亚早期HIV诊断的挑战,诊断和治疗延迟,以及接受抗逆转录病毒治疗的患者的治疗失败。
    方法:从2019-2022年,341名儿童的干血,赤道几内亚的青少年和成年人通过快速诊断检测被诊断为HIV阳性,并从Bata收集了54名暴露于艾滋病毒的婴儿,并将其送往马德里,以确认分子感染艾滋病毒(XpertHIV-1Qual,造父变菌)和/或血清学确认测定(Geenius-HIV-1/2,BioRad)。HIV诊断延迟(CD4<350个细胞/mm3),在病毒定量(XpertVLHIV-1,Cepheid)后,还研究了诊断时的晚期疾病(CD4<200个细胞/mm3)和抗逆转录病毒治疗延迟和失败(病毒血症>1,000RNA-HIV-1拷贝/ml)。
    结果:在5%的分析样本中发现了假阳性诊断。在赤道几内亚,90.5%的先前诊断的患者和3.7%的未在实地诊断的艾滋病毒暴露儿童中确认了艾滋病毒感染。每个新的HIV患者中有三分之二的诊断延迟,三分之一的人患有晚期疾病。28.3%的患者出现治疗延迟,青少年/成人的可能性是儿童的四倍左右。232名接受治疗的患者中有一半以上(56%)出现治疗失败,儿童/青少年明显高于成人(82.9%/90%vs.45.6%,p<0.001)。
    结论:我们确定了赤道几内亚早期HIV诊断的一些挑战,揭示出假阳性诊断率很高,诊断/治疗延迟,以及需要解决的治疗失败。实施更准确的快速诊断技术和验证性测试,除了改善获得护理的机会,治疗,意识,和筛选,将有助于控制艾滋病毒在该国的传播。
    BACKGROUND: In Equatorial Guinea, only 54 % of people living with HIV know their HIV status. There are no confirmatory or molecular diagnostic techniques for early diagnosis or monitoring of infection in the country. Rapid diagnostic tests can induce false-positive diagnoses if used as a confirmatory technique. Our study aimed to identify the challenges of early HIV diagnosis in Equatorial Guinea by analyzing the rate of false positive diagnoses, diagnostic and therapeutic delays, and treatment failures among those on antiretroviral therapy.
    METHODS: From 2019-2022, dried blood from 341 children, adolescents and adults diagnosed in Equatorial Guinea as HIV-positive by rapid diagnostic testing, and from 54 HIV-exposed infants were collected in Bata and sent to Madrid to confirm HIV-infection by molecular (Xpert HIV-1Qual, Cepheid) and/or serological confirmatory assays (Geenius-HIV-1/2, BioRad). HIV diagnostic delay (CD4 <350cells/mm3), advanced disease at diagnosis (CD4 <200cells/mm3) and antiretroviral treatment delay and failure (viraemia >1,000RNA-HIV-1-copies/ml) were also studied after viral quantification (XpertVL HIV-1, Cepheid).
    RESULTS: False-positive diagnoses were identified in 5 % of analysed samples. HIV infection was confirmed in 90.5 % of previously diagnosed patients in Equatorial Guinea and 3.7 % of HIV-exposed children undiagnosed in the field. Two-thirds of each new HIV patient had delayed diagnosis, and one-third had advanced disease. Treatment delay occurred in 28.3 % of patients, being around four times more likely in adolescents/adults than children. More than half (56 %) of 232 treated patients presented treatment failure, being significantly higher in children/adolescents than in adults (82.9 %/90 % vs. 45.6 %, p < 0.001).
    CONCLUSIONS: We identified some challenges of early HIV diagnosis in Equatorial Guinea, revealing a high rate of false positive diagnoses, diagnostic/treatment delays, and treatment failures that need to be addressed. The implementation of more accurate rapid diagnostic techniques and confirmatory tests, along with improving access to care, treatment, awareness, and screening, would contribute to controlling the spread of HIV in the country.
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  • 文章类型: Journal Article
    使用TB-Annotator软件对来自超过100,000个结核分枝杆菌复合体基因组的基因组测序数据进行分析,揭示了以前未知的谱系,提议的名字L10,在非洲中部。系统发育重建表明L10可能代表非洲分枝杆菌进化和地理迁移历史中的缺失环节。
    Analysis of genome sequencing data from >100,000 genomes of Mycobacterium tuberculosis complex using TB-Annotator software revealed a previously unknown lineage, proposed name L10, in central Africa. Phylogenetic reconstruction suggests L10 could represent a missing link in the evolutionary and geographic migration histories of M. africanum.
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  • 文章类型: Journal Article
    预测灾害(干旱,洪水,等。)由环境强迫引起,并减少它们对脆弱经济的影响,撒哈拉以南非洲需要对当前水资源的可用性和可靠的水文气候预报有充分的了解。这项研究的目的是量化Nyong盆地水资源的可用性并预测其未来演变(2024-2050)。为此,使用SWAT(土壤和水评估工具)模型。该模型的性能在校准(2001-2005)和验证(2006-2010)方面令人满意,与R2,NSE,KGE大于0.64。校准和验证中的-11.8%和-13.9%的偏差也证明了这种良好的性能。在调查的盆地中,渗透(GW_RCH),蒸散量(ETP),地表径流(SURQ),东部的产水量(WYLD)更大,可能是由于这部分的降雨量更充足。盆地中部和西南部的流量和泥沙负荷(SED)更大,当然是因为这部分地形平坦,对应于谷底。两个气候模型(CCCma和REMO)预测该流域的水资源将减少,和其他两个(HIRHAM5和RCA4)是相反的。然而,根据历史时期(2001-2005年)进行的统计研究,CCCma模型似乎是最可靠的。它预测降水和径流会下降,不超过-19%和-18%,分别,无论排放情景如何(RCP4.5或RCP8.5)。气候变异性(CV)是唯一一种在当前和未来流动动态中可见影响的强迫,由于在土地利用和土地覆盖(LULC)的演变中观察到的适度电流(建筑物和道路增加了102km2)和未来(建筑物和道路增加了114km2)的变化。这项研究的结果可能有助于改善流域和该地区的水资源管理。
    To anticipate disasters (drought, floods, etc.) caused by environmental forcing and reduce their impacts on its fragile economy, sub-Saharan Africa needs a good knowledge of the availability of current water resources and reliable hydroclimatic forecasts. This study has an objective to quantify the availability of water resources in the Nyong basin and predict its future evolution (2024-2050). For this, the SWAT (Soil and Water Assessment Tool) model was used. The performance of this model is satisfactory in calibration (2001-2005) and validation (2006-2010), with R2, NSE, and KGE greater than 0.64. Biases of - 11.8% and - 13.9% in calibration and validation also attest to this good performance. In the investigated basin, infiltration (GW_RCH), evapotranspiration (ETP), surface runoff (SURQ), and water yield (WYLD) are greater in the East, probably due to more abundant rainfall in this part. The flows and sediment load (SED) are greater in the middle zone and in the Southwest of the basin, certainly because of the flat topography of this part, which corresponds to the valley floor. Two climate models (CCCma and REMO) predict a decline in water resources in this basin, and two others (HIRHAM5 and RCA4) are the opposite. However, based on a statistical study carried out over the historical period (2001-2005), the CCCma model seems the most reliable. It forecasts a drop in precipitation and runoff, which do not exceed - 19% and - 18%, respectively, whatever the emission scenario (RCP4.5 or RCP8.5). Climate variability (CV) is the only forcing whose impact is visible in the dynamics of current and future flows, due to the modest current (increase of + 102 km2 in builds and roads) and future (increase of + 114 km2 in builds and roads) changes observed in the evolution of land use and land cover (LULC). The results of this study could contribute to improving water resource management in the basin studied and the region.
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  • 文章类型: Journal Article
    在1979-2022年期间,喀麦隆在国家监测网络确定的137例疑似水痘病例中记录了32例实验室确认的水痘病例。最高的阳性率发生在2022年,表明喀麦隆有可能再次出现水痘。同时报道了I型进化枝(n=12)和II型进化枝(n=18)猴痘病毒(MPXV),喀麦隆的一个独特的地方。2.2%的总病死率与进化枝II相关。我们发现天花只发生在该国森林茂密的南部,MPXV的系统地理结构揭示了并发循环进化枝之间明显的地理分离。进化枝I起源于中部非洲邻近的水痘流行国家附近的东部地区;进化枝II在西非附近的西部地区很普遍。我们的发现表明,MPXV在30年后重新出现,可能来自喀麦隆东部和西部雨林生态系统特有的不同病毒库。
    During 1979-2022, Cameroon recorded 32 laboratory-confirmed mpox cases among 137 suspected mpox cases identified by the national surveillance network. The highest positivity rate occurred in 2022, indicating potential mpox re-emergence in Cameroon. Both clade I (n = 12) and clade II (n = 18) monkeypox virus (MPXV) were reported, a unique feature of mpox in Cameroon. The overall case-fatality ratio of 2.2% was associated with clade II. We found mpox occurred only in the forested southern part of the country, and MPXV phylogeographic structure revealed a clear geographic separation among concurrent circulating clades. Clade I originated from eastern regions close to neighboring mpox-endemic countries in Central Africa; clade II was prevalent in western regions close to West Africa. Our findings suggest that MPXV re-emerged after a 30-year lapse and might arise from different viral reservoirs unique to ecosystems in eastern and western rainforests of Cameroon.
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  • 文章类型: Journal Article
    害虫生态学和生物学知识对于最大程度地保护作物和减少作物损失非常重要。目前,我们缺乏一个有效的控制可可低温动物SahlbergellasingularisHaglund(半翅目:Miridae)的程序,西非和中非可可的主要害虫。在Ayos和Konye的11个种植园进行了为期2年的研究,喀麦隆最大的两个可可种植区。我们评估了不良性信息素和气候变化对不良种群动态及其相关可可损害的影响。性信息素陷阱在Ayos中的捕获率比Konye高1.5倍,2015年的总体计数比2016年多。2015年的可可荚数量也明显高于2016年,并且与温度和相对湿度呈负相关。在这两个地方,在使用性信息素诱捕器的种植园中,低质种群和相关的可可豆荚损害受到抑制。损伤发生率与mirid计数呈正相关,确认可可豆荚是mirid喂养和繁殖的优先场所。因此,由于mirid的隐秘习惯,损伤发生率可以用作比较mirid人口水平的替代指标。在记录的天气变量中,只有相对湿度与损伤严重程度相关(负相关)。我们关于由mirids引起的损害与其种群动态和性信息素陷阱捕获量之间关系的数据表明,可以开发一种使用质量诱捕的有效控制策略,用于可可种植园的mirid管理。
    Knowledge of insect pest ecology and biology is important for maximizing crop protection and reducing crop losses. Currently, we lack an efficient control program for the cocoa mirid Sahlbergella singularis Haglund (Hemiptera: Miridae), the principal insect pest of cocoa in West and Central Africa. A 2-yr study was conducted in 11 plantations across Ayos and Konye, two of the largest cocoa growing areas of Cameroon. We evaluated the effects of mirid sex pheromone and climatic variations on mirid population dynamics and their associated cocoa damage. Sex pheromone traps caught 1.5-fold higher mirids in Ayos than in Konye, with more overall counts in 2015 than in 2016. Cocoa pod counts were also significantly higher in 2015 than in 2016 and were negatively correlated with temperature and relative humidity. In both localities, mirid populations and associated cocoa pod damage were suppressed in plantations where sex pheromone traps were used. Damage incidence was positively correlated with mirid counts, confirming that the cocoa pod is the preferential site for mirid feeding and reproduction. As such, damage incidence could be used as proxy for comparative mirid population level due to the mirid\'s cryptic habit. Of the recorded weather variables, only relative humidity was correlated (negatively) with damage severity. Our data on the relationships between damage caused by mirids and their population dynamics and sex pheromone trap catches suggest that an effective control strategy using mass trapping could be developed for mirid management in cocoa plantations.
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