背景:作为I型干扰素(IFN)反应的重要调节剂,TMEM173参与免疫调节和细胞死亡诱导。在最近的研究中,TMEM173的激活被认为是一种有前途的癌症免疫治疗策略.然而,TMEM173在B细胞急性淋巴细胞白血病(B-ALL)中的转录组学特征仍然难以捉摸。
方法:应用定量实时PCR(qRT-PCR)和蛋白质印迹(WB)测定外周血单核细胞(PBMC)中TMEM173的mRNA和蛋白质水平。通过Sanger测序评估TMEM173突变状态。进行单细胞RNA测序(scRNA-seq)分析以探索TMEM173在不同类型的骨髓(BM)细胞中的表达。
结果:来自B-ALL患者的PBMC中TMEM173的mRNA和蛋白水平升高。此外,2例B-ALL患者的TMEM173序列出现移码突变.ScRNA-seq分析确定了高危B-ALL患者BM中TMEM173的特异性转录组特征。具体来说,TMEM173在粒细胞中的表达水平,祖细胞,肥大细胞,浆细胞样树突状细胞(pDCs)高于B细胞,T细胞,自然杀伤(NK)细胞,和树突状细胞(DC)。亚群分析进一步显示,TMEM173和焦亡效应蛋白D(GSDMD)在具有增殖特征的前体B(pre-B)细胞中受到抑制,表达核因子κB(NF-κB),CD19和布鲁顿酪氨酸激酶(BTK)在B-ALL进展过程中。此外,TMEM173与B-ALL中NK细胞和DC的功能激活有关。
结论:我们的发现为TMEM173在高危B-ALL患者BM中的转录组特征提供了见解。TMEM173在特定细胞中的靶向激活可能为B-ALL患者提供新的治疗策略。
BACKGROUND: As an essential regulator of type I interferon (IFN) response,
TMEM173 participates in immune regulation and cell death induction. In recent studies, activation of TMEM173 has been regarded as a promising strategy for cancer immunotherapy. However, transcriptomic features of TMEM173 in B-cell acute lymphoblastic leukemia (B-ALL) remain elusive.
METHODS: Quantitative real-time PCR (qRT-PCR) and western blotting (WB) were applied to determine the mRNA and protein levels of TMEM173 in peripheral blood mononuclear cells (PBMCs).
TMEM173 mutation status was assessed by Sanger sequencing. Single-cell RNA sequencing (scRNA-seq) analysis was performed to explore the expression of
TMEM173 in different types of bone marrow (BM) cells.
RESULTS: The mRNA and protein levels of TMEM173 were increased in PBMCs from B-ALL patients. Besides, frameshift mutation was presented in
TMEM173 sequences of 2 B-ALL patients. ScRNA-seq analysis identified the specific transcriptome profiles of TMEM173 in the BM of high-risk B-ALL patients. Specifically, expression levels of TMEM173 in granulocytes, progenitor cells, mast cells, and plasmacytoid dendritic cells (pDCs) were higher than that in B cells, T cells, natural killer (NK) cells, and dendritic cells (DCs). Subset analysis further revealed that TMEM173 and pyroptosis effector gasdermin D (GSDMD) restrained in precursor-B (pre-B) cells with proliferative features, which expressed nuclear factor kappa-B (NF-κB), CD19, and Bruton\'s tyrosine kinase (BTK) during the progression of B-ALL. In addition,
TMEM173 was associated with the functional activation of NK cells and DCs in B-ALL.
CONCLUSIONS: Our findings provide insights into the transcriptomic features of TMEM173 in the BM of high-risk B-ALL patients. Targeted activation of TMEM173 in specific cells might provide new therapeutic strategies for B-ALL patients.