Nucleocytoplasmic Transport

核质转运
  • 文章类型: Journal Article
    热应力强烈触发分子伴侣HSP70的核定位。Hikeshi是HSP70的独特核进口载体。然而,热应激如何激活HSP70的核输入尚不清楚.这里,我们研究了热对HSP70核输入的影响。体外转运测定表明,用热预处理测试样品有助于HSP70的核输入。此外,当温度升高时,Hikeshi与HSP70的结合增加。这些结果表明,热量是激活HSP70核输入的因素之一。先前的研究表明,Hikeshi在扩展环中的F97A突变诱导了疏水口袋的开口,并促进了Hikeshi通过核孔复合物的易位。我们发现,与表达野生型Hikeshi的细胞相比,表达Hikeshi-F97A突变体的细胞在较低的温度下发生HSP70的核积累。总的来说,我们的结果表明,延伸环的运动可能在Hikeshi与FG(苯丙氨酸-甘氨酸)-核孔蛋白和HSP70以温度依赖性方式相互作用中起重要作用,导致响应热应激的HSP70核输入的激活。
    Heat stress strongly triggers the nuclear localization of the molecular chaperone HSP70. Hikeshi functions as a unique nuclear import carrier of HSP70. However, how the nuclear import of HSP70 is activated in response to heat stress remains unclear. Here, we investigated the effects of heat on the nuclear import of HSP70. In vitro transport assays revealed that pretreatment of the test samples with heat facilitated the nuclear import of HSP70. Furthermore, binding of Hikeshi to HSP70 increased when temperatures rose. These results indicated that heat is one of the factors that activates the nuclear import of HSP70. Previous studies showed that the F97A mutation in Hikeshi in an extended loop induced an opening in the hydrophobic pocket and facilitated the translocation of Hikeshi through the nuclear pore complex. We found that nuclear accumulation of HSP70 occurred at a lower temperature in cells expressing the Hikeshi-F97A mutant than in cells expressing wild-type Hikeshi. Collectively, our results show that the movement of the extended loop may play an important role in the interaction of Hikeshi with both FG (phenylalanine-glycine)-nucleoporins and HSP70 in a temperature-dependent manner, resulting in the activation of nuclear import of HSP70 in response to heat stress.
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  • 文章类型: Journal Article
    蛋白质和信使RNA的核质转运分析一直是先进的微观方法的重点。最近,有可能使用电子显微镜和光学显微镜来识别和观察通过核孔复合体的单个前核糖体颗粒.在这次审查中,我们专注于核糖体前颗粒在细胞核中的运输,以及它们通过毛孔的方式。
    The analysis of nucleocytoplasmic transport of proteins and messenger RNA has been the focus of advanced microscopic approaches. Recently, it has been possible to identify and visualize individual pre-ribosomal particles on their way through the nuclear pore complex using both electron and light microscopy. In this review, we focused on the transport of pre-ribosomal particles in the nucleus on their way to and through the pores.
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  • 文章类型: Journal Article
    RNA和DNA结合蛋白TDP-43的核排斥可以在不同的疾病中诱导神经变性。影响TDP-43误定位的过程多种多样,包括破坏的核质运输(NCT);然而,通常确保TDP-43核定位的生理途径尚不清楚.六跨膜酶甘油磷酸二酯磷酸二酯酶2(GDE2或GDPD5)裂解糖基磷脂酰肌醇(GPI)锚,将某些蛋白质连接到膜上。在这里,我们表明GDE2通过调节经典Wnt信号的动力学来维持TDP-43核定位。GDE2的消融导致成人神经元异常持续的Wnt激活,这足以导致NCT赤字,核孔隙异常,和TDP-43核排斥。GDE2的破坏与肌萎缩侧索硬化症(ALS)患者死后组织中的TDP-43异常相吻合。Further,GDE2缺陷在ALS的人类神经细胞模型中很明显,它显示错误的Wnt激活,当被抑制时,增加由TDP-43调节的基因的mRNA水平。我们的研究将GDE2确定为成人神经元中Wnt信号传导的关键生理调节因子,并强调Wnt通路激活是导致疾病中核质转运和TDP-43异常的未被理解的机制。
    Nuclear exclusion of the RNA- and DNA-binding protein TDP-43 can induce neurodegeneration in different diseases. Diverse processes have been implicated to influence TDP-43 mislocalization, including disrupted nucleocytoplasmic transport (NCT); however, the physiological pathways that normally ensure TDP-43 nuclear localization are unclear. The six-transmembrane enzyme glycerophosphodiester phosphodiesterase 2 (GDE2 or GDPD5) cleaves the glycosylphosphatidylinositol (GPI) anchor that tethers some proteins to the membrane. Here we show that GDE2 maintains TDP-43 nuclear localization by regulating the dynamics of canonical Wnt signaling. Ablation of GDE2 causes aberrantly sustained Wnt activation in adult neurons, which is sufficient to cause NCT deficits, nuclear pore abnormalities, and TDP-43 nuclear exclusion. Disruption of GDE2 coincides with TDP-43 abnormalities in postmortem tissue from patients with amyotrophic lateral sclerosis (ALS). Further, GDE2 deficits are evident in human neural cell models of ALS, which display erroneous Wnt activation that, when inhibited, increases mRNA levels of genes regulated by TDP-43. Our study identifies GDE2 as a critical physiological regulator of Wnt signaling in adult neurons and highlights Wnt pathway activation as an unappreciated mechanism contributing to nucleocytoplasmic transport and TDP-43 abnormalities in disease.
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  • 文章类型: Journal Article
    背景:核孔复合物(NPC)是细胞的核包膜中根深蒂固的结构,其调节诸如蛋白质和RNA的物质的核-细胞质运输以使细胞正常运作。蛋白质和RNA在细胞内的适当定位对于其正常功能至关重要。对于如此复杂的跨越NPC的材料运输,大约有60种蛋白质参与其中,包括核孔蛋白,在NPC的结构形成中起重要作用的核动力蛋白和RAN系统蛋白,跨NPC的货物转运,和货物分别是快速定向运输。在各种癌症中,NPC的结构和功能经常被夸大,在其核孔蛋白和核动力蛋白的表达改变后,影响相关信号通路的其他蛋白质。目前的一些核调素抑制剂具有调节这些核调素分子的改变的水平/表达的潜力。
    目的:这篇综述总结了1990年至2023年的数据,主要集中在说明NPC结构和功能的最新研究,核孔蛋白和核蛋白与结直肠癌的关系和机制,以及治疗价值,为了了解与NPC相关的结直肠癌的病理和基础。这是我们知识的第一次综述,阐明了针对NPC结直肠癌的详细更新研究。该审查还旨在针对某些核动力蛋白,Nups及其可能的抑制剂和激活剂分子作为治疗策略。
    NPC结构提供了理解,作为关键分子的核孔蛋白和核蛋白如何负责适当的核质运输。许多研究提供了描述破坏的核孔蛋白和核动力蛋白不仅在CRC中而且在其他非血液和血液恶性肿瘤中的作用的证据。目前,一些核蛋白抑制剂对CRC有治疗潜力,然而,开发更有效的抑制剂可能在不久的将来为CRC提供更有效的治疗策略.
    BACKGROUND: Nuclear pore complexes (NPCs) are the architectures entrenched in nuclear envelop of a cell that regulate the nucleo-cytoplasmic transportation of materials, such as proteins and RNAs for proper functioning of a cell. The appropriate localization of proteins and RNAs within the cell is essential for its normal functionality. For such a complex transportation of materials across the NPC, around 60 proteins are involved comprising nucleoporins, karyopherins and RAN system proteins that play a vital role in NPC\'s structure formation, cargo translocation across NPC, and cargoes\' rapid directed transportation respectively. In various cancers, the structure and function of NPC is often exaggerated, following altered expressions of its nucleoporins and karyopherins, affecting other proteins of associated signaling pathways. Some inhibitors of karyopherins at present, have potential to regulate the altered level/expression of these karyopherin molecules.
    OBJECTIVE: This review summarizes the data from 1990 to 2023, mainly focusing on recent studies that illustrate the structure and function of NPC, the relationship and mechanisms of nucleoporins and karyopherins with colorectal cancer, as well as therapeutic values, in order to understand the pathology and underlying basis of colorectal cancer associated with NPC. This is the first review to our knowledge elucidating the detailed updated studies targeting colorectal cancer at NPC. The review also aims to target certain karyopherins, Nups and their possible inhibitors and activators molecules as a therapeutic strategy.
    UNASSIGNED: NPC structure provides understanding, how nucleoporins and karyopherins as key molecules are responsible for appropriate nucleocytoplasmic transportation. Many studies provide evidences, describing the role of disrupted nucleoporins and karyopherins not only in CRC but also in other non-hematological and hematological malignancies. At present, some inhibitors of karyopherins have therapeutic potential for CRC, however development of more potent inhibitors may provide more effective therapeutic strategies for CRC in near future.
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  • 文章类型: Journal Article
    细胞分裂对真核细胞提出了挑战:染色体如何在膜核隔室的范围内有效地分离?不同的生物体通过调节核隔室的程度而进化出了不同的解决方案,从完整的核包络线破裂到通过核包络线扩展完全维持核分隔。在这些极端之间存在许多中间形式,表明细胞分裂过程中的核动力学是惊人的可塑性。在这次审查中,我们强调了核分裂的进化多样性,集中在两个定义特征:(1)染色体区隔和(2)核质运输。Further,我们强调了最近的证据,即分裂过程中的核行为可以在同一生物体的不同细胞环境中变化。在生物体内和生物体之间观察到的差异强调了根据特定环境和细胞要求量身定制的核分裂的动态进化。对不同核分裂的深入调查将增进我们对核子的认识,生理和病理状态。
    Cell division presents a challenge for eukaryotic cells: how can chromosomes effectively segregate within the confines of a membranous nuclear compartment? Different organisms have evolved diverse solutions by modulating the degree of nuclear compartmentalization, ranging from complete nuclear envelope breakdown to complete maintenance of nuclear compartmentalization via nuclear envelope expansion. Many intermediate forms exist between these extremes, suggesting that nuclear dynamics during cell division are surprisingly plastic. In this review, we highlight the evolutionary diversity of nuclear divisions, focusing on two defining characteristics: (1) chromosome compartmentalization and (2) nucleocytoplasmic transport. Further, we highlight recent evidence that nuclear behavior during division can vary within different cellular contexts in the same organism. The variation observed within and between organisms underscores the dynamic evolution of nuclear divisions tailored to specific contexts and cellular requirements. In-depth investigation of diverse nuclear divisions will enhance our understanding of the nucleus, both in physiological and pathological states.
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  • 文章类型: Journal Article
    信号分子的准确核质转运对于植物的生长和发育至关重要。多项研究证实,核质运输和受体参与调节植物抗病性反应,然而,对植物的调控机制知之甚少。在这项研究中,我们发现,在用丁香假单胞菌pv番茄DC3000(PstDC3000)处理后,与野生型Col-0相比,导入蛋白β样蛋白SAD2的突变体表现出更易感的表型.共免疫沉淀(Co-IP)和双分子荧光互补(BiFC)实验表明,SAD2与超敏反应(HR)-正转录调节因子MYB30相互作用。亚细胞定位表明,在sad2-5突变体中,MYB30未完全定位于细胞核中,蛋白质印迹实验进一步表明,在病原体感染过程中,MYB30核运输需要SAD2。病原体接种的表型测试表明,MYB30部分挽救了PstDC3000引起的sad2-5的疾病症状,并且MYB30在植物病原体防御中起SAD2的下游作用。这些结果表明,SAD2可能通过介导MYB30核运输参与植物病原体的防御。一起来看,我们的结果揭示了SAD2在植物病原体防御中的重要功能,并丰富了对核质运输介导的植物病原体防御机制的理解。
    Accurate nucleocytoplasmic transport of signal molecules is essential for plant growth and development. Multiple studies have confirmed that nucleocytoplasmic transport and receptors are involved in regulating plant disease resistance responses, however, little is known about the regulatory mechanism in plants. In this study, we showed that the mutant of the importin beta-like protein SAD2 exhibited a more susceptible phenotype than wild-type Col-0 after treatment with Pseudomonas syringae pv tomato DC3000 (Pst DC3000). Coimmunoprecipitation (Co-IP) and bimolecular fluorescence complementation (BiFC) experiments demonstrated that SAD2 interacts with the hypersensitive response (HR)-positive transcriptional regulator MYB30. Subcellular localization showed that MYB30 was not fully localized in the nucleus in sad2-5 mutants, and western-blot experiments further indicated that SAD2 was required for MYB30 nuclear trafficking during the pathogen infection process. A phenotypic test of pathogen inoculation demonstrated that MYB30 partially rescued the disease symptoms of sad2-5 caused by Pst DC3000, and that MYB30 worked downstream of SAD2 in plant pathogen defense. These results suggested that SAD2 might be involved in plant pathogen defense by mediating MYB30 nuclear trafficking. Taken together, our results revealed the important function of SAD2 in plant pathogen defense and enriched understanding of the mechanism of nucleocytoplasmic transport-mediated plant pathogen defense.
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  • 文章类型: Review
    各种细胞器之间的协调和信息交换确保了真核细胞的精确和有序功能。细胞质和核质之间的相互作用对于许多生理过程至关重要。大分子蛋白质转运到细胞核中需要核转运系统的帮助。这些蛋白质通常含有引导它们进入细胞核的核定位序列。了解大分子蛋白质的核导入机制对于理解细胞过程很重要。疾病相关改变的研究可以促进新的治疗策略的发展,并为临床试验提供额外的证据。这篇综述概述了参与核运输的蛋白质和大分子蛋白质运输的机制。
    Coordination and information exchange among the various organelles ensure the precise and orderly functioning of eukaryotic cells. Interaction between the cytoplasm and nucleoplasm is crucial for many physiological processes. Macromolecular protein transport into the nucleus requires assistance from the nuclear transport system. These proteins typically contain a nuclear localisation sequence that guides them to enter the nucleus. Understanding the mechanism of nuclear import of macromolecular proteins is important for comprehending cellular processes. Investigation of disease-related alterations can facilitate the development of novel therapeutic strategies and provide additional evidence for clinical trials. This review provides an overview of the proteins involved in nuclear transport and the mechanisms underlying macromolecular protein transport.
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  • 文章类型: Journal Article
    核质转运(NCT)的破坏是神经退行性疾病的重要机制。在C9orf72-ALS的情况下,通过C9orf72翻译的含精氨酸的二肽重复蛋白(R-DPRs)与核运输受体的Kapβ家族的结合可能会阻碍大分子通过核孔复合物(NPC)的运输。除了Kapβs,其他几种类型的转运成分与R-DPR表达细胞中的NCT损伤有关,但是这些观察的分子起源尚未得到澄清。这里,我们采用氨基酸分辨率的粗粒度分子动力学模型来研究PolyPR之间的直接相互作用,毒性最强的DPR,和各种核转运成分来阐明结合机制,并提供潜在的polyPR介导的NCT缺陷的完整图片。我们发现polyPR直接与Impa家族的几种亚型结合,CAS(Impa的特定出口商)和RanGAP。我们观察到polyPR和Ran之间没有结合。较低盐浓度下的较长polyPR也与RanGEF和NTF2接触。分析转运成分上的polyPR接触位点表明,polyPR可能会干扰RanGTP/RanGDP结合,含有核定位信号(NLS)的货物(cargo-NLS)与Impa结合,随着货物-NLS从Impa释放,并从原子核导出Impα。多种转运成分上的polyPR结合位点的丰度与固有的polyPR长度依赖性相结合,使得NCT的直接polyPR干扰成为C9orf72毒性的潜在机制途径。
    The disruption of nucleocytoplasmic transport (NCT) is an important mechanism in neurodegenerative diseases. In the case of C9orf72-ALS, trafficking of macromolecules through the nuclear pore complex (NPC) might get frustrated by the binding of C9orf72-translated arginine-containing dipeptide repeat proteins (R-DPRs) to the Kapβ family of nuclear transport receptors. Besides Kapβs, several other types of transport components have been linked to NCT impairments in R-DPR-expressed cells, but the molecular origin of these observations has not been clarified. Here, we adopt a coarse-grained molecular dynamics model at amino acid resolution to study the direct interaction between polyPR, the most toxic DPR, and various nuclear transport components to elucidate the binding mechanisms and provide a complete picture of potential polyPR-mediated NCT defects. We found polyPR to directly bind to several isoforms of the Impα family, CAS (the specific exporter of Impα) and RanGAP. We observe no binding between polyPR and Ran. Longer polyPRs at lower salt concentrations also make contact with RanGEF and NTF2. Analyzing the polyPR contact sites on the transport components reveals that polyPR potentially interferes with RanGTP/RanGDP binding, with nuclear localization signal (NLS)-containing cargoes (cargo-NLS) binding to Impα, with cargo-NLS release from Impα, and with Impα export from the nucleus. The abundance of polyPR-binding sites on multiple transport components combined with the inherent polyPR length dependence makes direct polyPR interference of NCT a potential mechanistic pathway of C9orf72 toxicity.
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  • 文章类型: Journal Article
    DYT1肌张力障碍是一种使人衰弱的神经运动障碍,它代表了遗传性原发性肌张力障碍最常见和最严重的形式。由于其发病机理尚不清楚,目前尚无治愈方法。在我们先前利用患者特异性运动神经元(MNs)的研究中,我们发现了与疾病相关的明显的细胞缺陷,包括变形的细胞核,神经发育中断,和受损的核质转运(NCT)功能。然而,这些细胞损伤背后的精确分子机制仍然难以捉摸。在这项研究中,我们通过转录组学分析揭示了DYT1MNs基因表达的全基因组变化。我们发现这些失调的基因与神经发育和各种生物过程密切相关。有趣的是,我们确定了RANBP17的表达水平,RANBP17是一种对NCT调节至关重要的RAN结合蛋白,表现出DYT1MNs的显著降低。通过操纵RANBP17表达,我们进一步证明,RANBP17在促进蛋白质和转录物的核转运中起着重要作用。令人兴奋的是,RANBP17的过度表达是一个重要的缓解因素,有效恢复受损的NCT活动并挽救DYT1MNs中观察到的神经发育缺陷。这些发现揭示了DYT1神经元中受损NCT的复杂分子基础,并为DYT1肌张力障碍的病理生理学提供了新的见解。可能导致创新治疗策略的发展。DYT1肌张力障碍是一种使人衰弱的神经运动障碍,目前,由于其发病机制不清楚,目前尚无治愈方法。然而,患者神经元的不可接近性极大地阻碍了对这种疾病的研究进展。在这项研究中,我们从诱导多能干细胞(iPSCs)中产生了DYT1患者特异性神经元,并检测了全基因组基因表达的变化.我们已经确定了RANBP17,一个核运输监管机构,起到了实质性的缓解作用,有效挽救DYT1神经元中观察到的细胞缺陷。这些发现揭示了DYT1肌张力障碍中复杂的分子基础,并有可能导致创新治疗策略的发展。
    DYT1 dystonia is a debilitating neurological movement disorder, and it represents the most frequent and severe form of hereditary primary dystonia. There is currently no cure for this disease due to its unclear pathogenesis. In our previous study utilizing patient-specific motor neurons (MNs), we identified distinct cellular deficits associated with the disease, including a deformed nucleus, disrupted neurodevelopment, and compromised nucleocytoplasmic transport (NCT) functions. However, the precise molecular mechanisms underlying these cellular impairments have remained elusive. In this study, we revealed the genome-wide changes in gene expression in DYT1 MNs through transcriptomic analysis. We found that those dysregulated genes are intricately involved in neurodevelopment and various biological processes. Interestingly, we identified that the expression level of RANBP17, a RAN-binding protein crucial for NCT regulation, exhibited a significant reduction in DYT1 MNs. By manipulating RANBP17 expression, we further demonstrated that RANBP17 plays an important role in facilitating the nuclear transport of both protein and transcript cargos in induced human neurons. Excitingly, the overexpression of RANBP17 emerged as a substantial mitigating factor, effectively restoring impaired NCT activity and rescuing neurodevelopmental deficits observed in DYT1 MNs. These findings shed light on the intricate molecular underpinnings of impaired NCT in DYT1 neurons and provide novel insights into the pathophysiology of DYT1 dystonia, potentially leading to the development of innovative treatment strategies.
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  • 文章类型: Journal Article
    亨廷顿病是由亨廷顿蛋白(mHtt)中编码延伸的PolyQ束的亨廷顿基因外显子1中CAG重复序列的扩展引起的。这种扩展导致基底神经节中纹状体中刺投射神经元的选择性变性。该突变在人类和小鼠模型的神经发育过程中引起异常。这里,我们报道mHtt/PolyQ聚集体在发育过程中抑制果蝇大脑中的细胞周期。PolyQ聚集体破坏细胞的核孔复合物,防止细胞周期蛋白如CyclinE,E2F和PCNA从细胞质到细胞核,从而影响细胞周期进程。PolyQ聚集体还破坏表达mHtt的哺乳动物CAD神经元中的核孔复合物和核输入。PolyQ毒性和细胞周期缺陷可以通过增强RanGAP介导的核导入来恢复,提示这种疾病的潜在治疗方法。
    Huntington\'s disease is caused by an expansion of CAG repeats in exon 1 of the huntingtin gene encoding an extended PolyQ tract within the Huntingtin protein (mHtt). This expansion results in selective degeneration of striatal medium spiny projection neurons in the basal ganglia. The mutation causes abnormalities during neurodevelopment in human and mouse models. Here, we report that mHtt/PolyQ aggregates inhibit the cell cycle in the Drosophila brain during development. PolyQ aggregates disrupt the nuclear pore complexes of the cells preventing the translocation of cell cycle proteins such as Cyclin E, E2F and PCNA from cytoplasm to the nucleus, thus affecting cell cycle progression. PolyQ aggregates also disrupt the nuclear pore complex and nuclear import in mHtt expressing mammalian CAD neurons. PolyQ toxicity and cell cycle defects can be restored by enhancing RanGAP-mediated nuclear import, suggesting a potential therapeutic approach for this disease.
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