Life Cycle Stages

生命周期阶段
  • 文章类型: Journal Article
    人为压力威胁着生物多样性,有必要采取基于稳健生态模型的保护行动。然而,流行模型不能充分捕获高流动性或复杂生活史的物种所面临的环境压力的时空变化,因为数据通常是跨物种的生活史或空间分布汇总的。我们强调了动态物种的静态模型的局限性,并将物种和压力源的生活史变化和空间分布纳入了基于性状的脆弱性和影响模型。我们在大加勒比地区使用绿海龟来展示动态物种的脆弱性和人为影响如何在四个生命阶段发生变化。通过将生命阶段纳入基于特征的脆弱性模型,我们观察到生命阶段特定的漏洞,这些漏洞在使用聚合特征值集时未被注意到.早期生活阶段更容易受到一些压力,如无机污染或海洋热浪,对他人不那么脆弱,如bycatch。将压力源和生命阶段的空间分布相结合,揭示了不同空间区域的每个生命阶段的影响不同,强调特定阶段保护措施的重要性。我们的方法展示了将动态过程纳入生态模型的重要性,并将为具有复杂生活史和高流动性的物种提供更好,更有针对性的保护行动。
    Anthropogenic pressures threaten biodiversity, necessitating conservation actions founded on robust ecological models. However, prevailing models inadequately capture the spatiotemporal variation in environmental pressures faced by species with high mobility or complex life histories, as data are often aggregated across species\' life histories or spatial distributions. We highlight the limitations of static models for dynamic species and incorporate life history variation and spatial distributions for species and stressors into a trait-based vulnerability and impact model. We use green sea turtles in the Greater Caribbean Region to demonstrate how vulnerability and anthropogenic impact for a dynamic species change across four life stages. By incorporating life stages into a trait-based vulnerability model, we observed life stage-specific vulnerabilities that were otherwise unnoticed when using an aggregated trait value set. Early life stages were more vulnerable to some stressors, such as inorganic pollution or marine heat waves, and less vulnerable to others, such as bycatch. Incorporating spatial distributions of stressors and life stages revealed impacts differ for each life stage across spatial areas, emphasizing the importance of stage-specific conservation measures. Our approach showcases the importance of incorporating dynamic processes into ecological models and will enable better and more targeted conservation actions for species with complex life histories and high mobility.
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  • 文章类型: Journal Article
    背景:由腺样体线虫引起的人类寄生虫感染包括一系列疾病,包括角球菌病,毛虫病,毛细血管病,旋毛虫病,和肌炎。这些感染可能对人类健康造成不利影响,并在热带和亚热带地区引起社会和经济关注。
    方法:这篇综述在PubMed中进行了搜索,Embase和GoogleScholar在2024年4月26日之前在已建立的数据库中发表的相关研究。专注于常见形态的研究,生命周期,疾病分布,临床表现,包括人类腺样体寄生虫病的预防和控制策略。
    结果:腺体线虫表现出具有四层角质层的共同形态特征;无核的表皮细胞;具有六个或更多的腔细胞的假腔;通常三个尾腺;五个食道腺;男性的两个睾丸,单排正中腹腺;尾巴在头部,具有单个食唇系统;通常具有非角状末端导管。人类在线虫类的生命周期中起着两个重要的作用,腺病毒:1)作为通过摄入未煮熟的paratenic宿主而感染的最终宿主,胚胎蛋,被包膜或非包膜幼虫污染的鱼组织和肉中的感染性幼虫,和2)作为意外宿主,通过在未煮熟的肉中摄取寄生卵而感染。人类中的许多器官都是腺样体线虫的目标,例如肠道,肺,肝脏,肾脏,淋巴循环和血管,导致胃肠道问题,过度的免疫反应,细胞破裂,甚至死亡。这些感染大多数在非洲发展中国家有很高的发病率,亚洲和拉丁美洲;一些寄生虫病限制了疫情的传播。为了预防这些疾病,干预和教育,卫生,为了减少和控制寄生虫数量,已经引入了卫生和动物控制措施。
    结论:常见形态,生命周期,强调了人类腺样体线虫传播的寄生虫病的全球流行病学和病理学,以及它们的预防和控制。这篇综述的发现将有助于改善人类寄生虫感染的监测和预测,理解动物之间的关系,人类和寄生虫,预防和控制寄生虫病。
    BACKGROUND: Human parasitic infections caused by Adenophorean nematodes encompass a range of diseases, including dioctophymiasis, trichuriasis, capillariasis, trichinellosis, and myositis. These infection can result in adverse impacts on human health and cause societal and economic concerns in tropical and subtropical regions.
    METHODS: This review conducted searches in PubMed, Embase and Google Scholar for relevant studies that published in established databases up to April 26, 2024. Studies that focused on the common morphology, life cycle, disease distribution, clinical manifestations, and prevention and control strategies for Adenophorean parasitic diseases in humans were included.
    RESULTS: Adenophorean nematodes exhibit shared morphological characteristics with a four-layered cuticle; uninucleate epidermal cells; pseudocoelom with six or more coelomocytes; generally three caudal glands; five esophageal glands; two testes in males with median-ventral supplementary glands in a single row; tail in males rarely possessing caudal alae; amphids always postlabial; presence of cephalic sensory organs; absence of phasmids; and a secretory-excretory system consisting of a single ventral gland cell, usually with a non-cuticularized terminal duct. Humans play two important roles in the life cycle of the nematode class, Adenophorea: 1) as a definitive host infected by ingesting undercooked paratenic hosts, embryonated eggs, infective larvae in fish tissue and meat contaminated with encysted or non-encysted larvae, and 2) as an accidental host infected by ingesting parasitic eggs in undercooked meat. Many organs are targeted by the Adenophorean nematode in humans such as the intestines, lungs, liver, kidneys, lymphatic circulation and blood vessels, resulting in gastrointestinal problems, excessive immunological responses, cell disruption, and even death. Most of these infections have significant incidence rates in the developing countries of Africa, Asia and Latin America; however, some parasitic diseases have restricted dissemination in outbreaks. To prevent these diseases, interventions together with education, sanitation, hygiene and animal control measures have been introduced in order to reduce and control parasite populations.
    CONCLUSIONS: The common morphology, life cycle, global epidemiology and pathology of human Adenophorean nematode-borne parasitic diseases were highlighted, as well as their prevention and control. The findings of this review will contribute to improvement of monitoring and predicting human-parasitic infections, understanding the relationship between animals, humans and parasites, and preventing and controlling parasitic diseases.
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  • 文章类型: Journal Article
    翻译后修饰(PTM)对于调节蛋白质功能至关重要。影响真核生物的各种基本过程。这些包括,但不限于,细胞信号,蛋白质贩运,基因表达的表观遗传控制,和细胞周期的控制,以及细胞增殖,分化,和细胞之间的相互作用。在这次审查中,我们讨论了在疟疾寄生虫生物学及其发病机制中起关键作用的蛋白PTM。磷酸化,乙酰化,甲基化,脂化和脂氧化,糖基化,泛素化和磺酰化,亚硝基化和谷胱甘肽酰化,所有这些都发生在疟疾寄生虫中,被审查。我们提供了有关疟原虫复杂生命周期所有阶段这些修饰的生物学意义的信息。重要的是,不仅仅是寄生虫,而且宿主和载体蛋白PTM通常对寄生虫的生长和发育至关重要。除了代谢调节,蛋白PTM可以产生能够引发宿主或载体的先天和适应性免疫应答的表位。我们讨论了针对寄生虫或宿主中各种PTM相关过程的抗疟药物发现试验的一些现有和前瞻性结果。
    Post-translational modifications (PTMs) are essential for regulating protein functions, influencing various fundamental processes in eukaryotes. These include, but are not limited to, cell signaling, protein trafficking, the epigenetic control of gene expression, and control of the cell cycle, as well as cell proliferation, differentiation, and interactions between cells. In this review, we discuss protein PTMs that play a key role in the malaria parasite biology and its pathogenesis. Phosphorylation, acetylation, methylation, lipidation and lipoxidation, glycosylation, ubiquitination and sumoylation, nitrosylation and glutathionylation, all of which occur in malarial parasites, are reviewed. We provide information regarding the biological significance of these modifications along all phases of the complex life cycle of Plasmodium spp. Importantly, not only the parasite, but also the host and vector protein PTMs are often crucial for parasite growth and development. In addition to metabolic regulations, protein PTMs can result in epitopes that are able to elicit both innate and adaptive immune responses of the host or vector. We discuss some existing and prospective results from antimalarial drug discovery trials that target various PTM-related processes in the parasite or host.
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  • 文章类型: Journal Article
    随着对大多数抗疟药的耐药性增加,开发新药物势在必行。我们以前鉴定了一种芳基乙酰胺化合物,MMV006833(M-833),抑制了新入侵的裂殖子的环形发育。这里,我们选择对M-833具有抗性的寄生虫,并鉴定START脂质转移蛋白(PF3D7_0104200,PfSTART1)中的突变。将PfSTART1突变引入野生型寄生虫会产生对M-833以及更有效类似物的抗性。PfSTART1与类似物的结合使用基于有机溶剂的蛋白质组积分溶解度改变(溶剂PISA)测定来验证。入侵裂殖子的成像显示,抑制剂可能通过抑制包裹的寄生虫液泡膜的扩张来预防环期寄生虫的发展。PfSTART1靶向化合物还可以阻止向蚊子的传播,并且寄生虫生命周期的多个阶段受到影响,PfSTART1代表具有新作用机制的药物靶标。
    With resistance to most antimalarials increasing, it is imperative that new drugs are developed. We previously identified an aryl acetamide compound, MMV006833 (M-833), that inhibited the ring-stage development of newly invaded merozoites. Here, we select parasites resistant to M-833 and identify mutations in the START lipid transfer protein (PF3D7_0104200, PfSTART1). Introducing PfSTART1 mutations into wildtype parasites reproduces resistance to M-833 as well as to more potent analogues. PfSTART1 binding to the analogues is validated using organic solvent-based Proteome Integral Solubility Alteration (Solvent PISA) assays. Imaging of invading merozoites shows the inhibitors prevent the development of ring-stage parasites potentially by inhibiting the expansion of the encasing parasitophorous vacuole membrane. The PfSTART1-targeting compounds also block transmission to mosquitoes and with multiple stages of the parasite\'s lifecycle being affected, PfSTART1 represents a drug target with a new mechanism of action.
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  • 文章类型: Journal Article
    肝片吸虫引起的筋膜病是世界范围内的重大公共卫生和经济问题。由于缺乏成功的疫苗和新出现的对药物曲拉莫达唑的耐药性,正在研究替代的植物治疗方法。这项研究调查了薰衣草(Lavandulaangustifolia)和角豆树(CeratoniasiliquaL.)精油(EOs)对肝菌的体外驱虫活性。体外研究基于卵孵化试验(EHA),成人运动抑制试验,DNA损伤,活性氧(ROS)水平以及几种氧化应激生物标志物,包括谷胱甘肽过氧化物酶(GSH),和谷胱甘肽-S-转移酶(GST),超氧化物歧化酶(SOD)和丙二醛(MDA)。为此,不同浓度的L.angustifolia和C.siliquaEOs(1,5,10,25和50mg/mL)用于评估对不同生命阶段的驱虫作用,包括鸡蛋,和成人肝肝病毒24小时。结果表明,这些EO作为驱虫药起重要作用,效果取决于时间和浓度。在体外处理的F.hepitca蠕虫与L.angustifolia和C.siliquaEOs增加DNA损伤,ROS的产生和氧化应激的诱导(降低SOD,GST和GSH,并增加MDA),与对照组相比。因此,可以得出结论,沙棘状芽孢杆菌和C.siliquaEO具有用作控制和治疗肝肠弧菌感染的新型药物的潜力。需要进一步的研究来研究其用于治疗寄生虫感染的体内药理学潜力和有效性。
    Fasciolosis caused by Fasciola hepatica is a major public health and economic problem worldwide. Due to the lack of a successful vaccine and emerging resistance to the drug triclabendazole, alternative phytotherapeutic approaches are being investigated. This study investigated the in vitro anthelmintic activity of Lavender (Lavandula angustifolia) and carob (Ceratonia siliqua L.) essential oils (EOs) against F. hepatica. The in vitro study was based on an egg hatch assay (EHA), adult motility inhibition assays, DNA damage, reactive oxygen species (ROS) level along with several oxidative stress biomarkers including glutathione peroxidase (GSH), and glutathione-S-transferase (GST), superoxide dismutase (SOD) and malondialdehyde (MDA). To this end, different concentrations of L. angustifolia and C. siliqua EOs (1, 5, 10, 25 and 50 mg/mL) were used to assess anthelmintic effects on different life stages including egg, and adults of F. hepatica for 24 hrs. The results indicated that these EOs play a significant role as anthelminthics, and the effect was dependent on time and concentration. The in vitro treatment of F. hepatica worms with both L. angustifolia and C. siliqua EOs increased DNA damage, ROS production and induction of oxidative stress (decreased SOD, GST and GSH, and increased MDA), significantly compared to control. Therefore, it can be concluded that L. angustifolia and C. siliqua EOs have the potential to be used as novel agents for the control and treatment of F. hepatica infections. Further studies are required to investigate their pharmacological potential and effectiveness in vivo for the treatment of parasitic infections.
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  • 文章类型: Journal Article
    滴答,吸血外寄生虫,将疾病传播给人类和动物。长尾隐球菌是医学和兽医环境中蜱传疾病的重要媒介。鉴定长蜱H.longicornis中的保护性抗原用于抗蜱疫苗是关键的蜱控制策略。烯醇化酶,多功能蛋白质,在细胞质中的糖酵解和糖异生中显著转化D-2-磷酸甘油酸和磷酸烯醇丙酮酸。本研究从H.longicornistick中克隆了烯醇化酶的完整开放阅读框(ORF),并表征了其转录和沉默作用。我们使用cDNA末端的快速扩增来扩增烯醇化酶基因的全长cDNA。完整的cDNA,ORF为1,297个核苷酸,编码一个432个氨基酸的多肽.济州菌株H.longicornis的烯醇化酶与H.flava表现出最高的序列相似性(98%),其次是银屑病(82%)。鉴定的烯醇化酶基序包括N端和C端区域,镁结合位点,和几个磷酸化位点。逆转录聚合酶链反应(RT-PCR)分析表明,烯醇化酶mRNA转录本在壁虱和唾液腺和中肠等器官的所有发育阶段均表达。RT-PCR显示syn-神经节中转录水平较高,提示神经节神经影响烯醇化酶,在蜱唾液腺中的作用。我们将烯醇化酶双链RNA注射到成年未进食的雌性蜱中,之后,他们随后用正常的未喂食的雄性喂食,直到它们自发脱落。RNA干扰显着(P<0.05)降低了摄食和繁殖,以及卵异常(无胚胎)和孵化。这些发现表明烯醇化酶是未来蜱控制策略的有希望的目标。
    Ticks, blood-sucking ectoparasites, spread diseases to humans and animals. Haemaphysalis longicornis is a significant vector for tick-borne diseases in medical and veterinary contexts. Identifying protective antigens in H. longicornis for an anti-tick vaccine is a key tick control strategy. Enolase, a multifunctional protein, significantly converts D-2-phosphoglycerate and phosphoenolpyruvate in glycolysis and gluconeogenesis in cell cytoplasm. This study cloned a complete open reading frame (ORF) of enolase from the H. longicornis tick and characterized its transcriptional and silencing effect. We amplified the full-length cDNA of the enolase gene using rapid amplification of cDNA ends. The complete cDNA, with an ORF of 1,297 nucleotides, encoded a 432-amino acid polypeptide. Enolase of the Jeju strain H. longicornis exhibited the highest sequence similarity with H. flava (98%), followed by Dermacentor silvarum (82%). The enolase motifs identified included N-terminal and C-terminal regions, magnesium binding sites, and several phosphorylation sites. Reverse transcription-polymerase chain reaction (RT-PCR) analysis indicated that enolase mRNA transcripts were expressed across all developmental stages of ticks and organs such as salivary gland and midgut. RT-PCR showed higher transcript levels in syn-ganglia, suggesting that synganglion nerves influence enolase,s role in tick salivary glands. We injected enolase double-stranded RNA into adult unfed female ticks, after which they were subsequently fed with normal unfed males until they spontaneously dropped off. RNA interference significantly (P<0.05) reduced feeding and reproduction, along with abnormalities in eggs (no embryos) and hatching. These findings suggest enolase is a promising target for future tick control strategies.
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  • 文章类型: Journal Article
    相对于众多关注哺乳动物血吸虫的研究,较少包括禽类血吸虫,特别是在南半球。这种情况正在发生变化,新热带的最新研究表明,特有分类群具有显着的多样性。为了促进这一努力,九只鸭子(紫翅目,S.versicolor,Nettapeposaca),12只天鹅(天鹅座)和1,400个Physaspp。来自智利和阿根廷的蜗牛被收集用于成虫和幼虫血吸虫,分别。保存分离的血吸虫进行形态学和分子分析(28S和COI基因)。从鸟类中回收了四种不同的血吸虫类群:毛虫。在形成进化枝的蛇床子和蓝翅目中;蓝翅目和杂色毛虫寄养了毛虫;天鹅座托管了鼻血吸虫,黑血球;和一个内脏,血吸虫。sp.,从以前的工作中,它与来自阿根廷和智利的furcocer虫形成了进化枝。在生理蜗牛中,根据分子分析,只有来自阿根廷的一个人患有血吸虫草虫。这项研究代表了对智利成年血吸虫的首次描述,以及对智利和新热带的黑斑念珠菌和T.querquedulae的生命周期的阐明,分别。没有保存完好的成年人,假定的新血吸虫属。sp.无法描述,但它的生命周期涉及Chilinaspp。和C.melancoryphus.T.querquedulae的扫描电子显微镜显示,未描述的形态特征,强调其诊断的重要性。作者强调需要对新热带地区的禽血吸虫进行更多调查,以更好地了解其进化史。
    Relative to the numerous studies focused on mammalian schistosomes, fewer include avian schistosomatids particularly in the southern hemisphere. This is changing and current research emerging from the Neotropics shows a remarkable diversity of endemic taxa. To contribute to this effort, nine ducks (Spatula cyanoptera, S.versicolor, Netta peposaca), 12 swans (Cygnus melancoryphus) and 1,400 Physa spp. snails from Chile and Argentina were collected for adults and larval schistosomatids, respectively. Isolated schistosomatids were preserved for morphological and molecular analyses (28S and COI genes). Four different schistosomatid taxa were retrieved from birds: Trichobilharzia sp. in N. peposaca and S. cyanoptera that formed a clade; S.cyanoptera and S. versicolor hosted Trichobilharzia querquedulae; Cygnus melancoryphus hosted the nasal schistosomatid, Nasusbilharzia melancorhypha; and one visceral, Schistosomatidae gen. sp., which formed a clade with furcocercariae from Argentina and Chile from previous work. Of the physid snails, only one from Argentina had schistosomatid furcocercariae that based on molecular analyses grouped with T. querquedulae. This study represents the first description of adult schistosomatids from Chile as well as the elucidation of the life cycles of N.melancorhypha and T. querquedulae in Chile and Neotropics, respectively. Without well-preserved adults, the putative new genus Schistosomatidae gen. sp. could not be described, but its life cycle involves Chilina spp. and C. melancoryphus. Scanning electron microscopy of T. querquedulae revealed additional, undescribed morphological traits, highlighting its diagnostic importance. Authors stress the need for additional surveys of avian schistosomatids from the Neotropics to better understand their evolutionary history.
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  • 文章类型: Journal Article
    弓形虫,人类和动物的重要细胞内寄生虫,在免疫功能低下的个体中导致危及生命的弓形虫病。尽管急性感染期间弓形虫分泌蛋白(速殖子,迅速分裂并导致炎症)已被广泛表征,那些参与慢性感染的人(缓生子,缓慢分开并被囊肿壁包围)仍然不确定。囊壁的调节对寄生虫的生命周期至关重要,和多糖,如甲壳素,在囊壁是维持潜伏感染所必需的。缓生时期的弓形虫分泌蛋白可能在通过多糖调节囊壁中起重要作用。这里,我们专注于表征假设的弓形虫几丁质酶,几丁质酶样蛋白1(TgCLP1)。我们发现含有TgCLP1的几丁质酶样结构域部分存在于缓生子粒中,并证实了,尽管部分,它以前在速殖子微丝中的鉴定。此外,尽管缺乏TgCLP1的寄生虫可以从速殖子转化为缓生子,并形成完整的囊壁,他们未能从缓子转变为速殖子,表明TgCLP1是缓生子再活化所必需的。一起来看,我们的发现加深了我们对复发的分子基础的理解,并可能有助于开发控制弓形虫病的新策略。
    Toxoplasma, an important intracellular parasite of humans and animals, causes life-threatening toxoplasmosis in immunocompromised individuals. Although Toxoplasma secretory proteins during acute infection (tachyzoite, which divides rapidly and causes inflammation) have been extensively characterized, those involved in chronic infection (bradyzoite, which divides slowly and is surrounded by a cyst wall) remain uncertain. Regulation of the cyst wall is essential to the parasite life cycle, and polysaccharides, such as chitin, in the cyst wall are necessary to sustain latent infection. Toxoplasma secretory proteins during the bradyzoite stage may have important roles in regulating the cyst wall via polysaccharides. Here, we focused on characterizing the hypothetical T. gondii chitinase, chitinase-like protein 1 (TgCLP1). We found that the chitinase-like domain containing TgCLP1 is partially present in the bradyzoite microneme and confirmed, albeit partially, its previous identification in the tachyzoite microneme. Furthermore, although parasites lacking TgCLP1 could convert from tachyzoites to bradyzoites and make an intact cyst wall, they failed to convert from bradyzoites to tachyzoites, indicating that TgCLP1 is necessary for bradyzoite reactivation. Taken together, our findings deepen our understanding of the molecular basis of recrudescence and could contribute to the development of novel strategies for the control of toxoplasmosis.
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  • 文章类型: Journal Article
    殖民地动物由保持物理连接和生理整合的克隆个体组成。Salps是具有双重生命周期的被膜,包括一个无性的孤独阶段,它萌芽了由喷射推进的类动物组成的性殖民地,这些类动物通过多喷射推进作为一个单元有效地一起游泳。来自不同物种的殖民地发展出独特的体系结构,其特征在于它们的类动物排列模式,但是这种多样性很少受到关注。因此,这些架构从未使用允许比较分析的变量和轴的框架来正式定义。我们着手定义salp殖民地体系结构形态空间的本体,并描述构建不同体系结构的发展途径。为了告知这些定义,我们通过海上水肺潜水收集并拍摄了成年和发育中的菌落的活体标本。由于所有的盐菌落都开始发展为横向双链,我们将每个成年殖民地建筑都描述为一系列发展过渡,例如类动物的旋转和平移,相对于他们在这个早期共享阶段的取向。我们假设所有的成人结构都是在三个发育途径中的最终或中间阶段,群集,或螺旋形式。该框架将能够对生物力学意义进行比较研究,生态功能,进化史,和salp殖民地体系结构多样性的工程应用。
    AbstractColonial animals are composed of clonal individuals that remain physically connected and physiologically integrated. Salps are tunicates with a dual life cycle, including an asexual solitary stage that buds sexual colonies composed of jet-propelling zooids that efficiently swim together as a single unit by multijet propulsion. Colonies from different species develop distinct architectures characterized by their zooid arrangement patterns, but this diversity has received little attention. Thus, these architectures have never been formally defined using a framework of variables and axes that would allow comparative analyses. We set out to define an ontology of the salp colony architecture morphospace and describe the developmental pathways that build the different architectures. To inform these definitions, we collected and photographed live specimens of adult and developing colonies through offshore scuba diving. Since all salp colonies begin their development as a transversal double chain, we characterized each adult colonial architecture as a series of developmental transitions, such as rotations and translations of zooids, relative to their orientation at this early shared stage. We hypothesize that all adult architectures are either final or intermediate stages within three developmental pathways toward bipinnate, cluster, or helical forms. This framework will enable comparative studies on the biomechanical implications, ecological functions, evolutionary history, and engineering applications of the diversity of salp colony architectures.
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  • 文章类型: Journal Article
    微生物在维持土壤生态系统和农业方面发挥着核心作用,这些功能通常与他们复杂的生活史有关。然而,生活史的调节和进化仍然是神秘和知之甚少,尤其是在原生动物中,土壤中第三丰富的生物群。这里,我们探索一个世界性物种——Colpodasteinii的生活史。我们的分析为C.steinii产生了高质量的大核基因组,大小为155Mbp和37,123个蛋白质编码基因,以及平均内含子长度约93bp,比大多数其他研究纤毛虫长。值得注意的是,我们在C.steinii中确定了两个可能的全基因组复制事件,这可能解释了它的基因组大约是C.inflata的两倍,另一个共存的物种。我们进一步解析了C.steinii不同生命阶段的基因表达谱,这在C.inflata中也得到了证实。在囊肿静止期,与细胞死亡和液泡形成相关的基因上调,和翻译相关的基因下调。而翻译相关基因在静息囊肿的分泌过程中上调。生殖囊肿表现出细胞粘附的显着降低。我们还证明,在特定生命阶段表达的大多数基因都处于强纯化选择下。这项研究提供了对生活史演变的更深入的了解,这些生活史是土壤生态系统中微生物非凡成功和生态功能的基础。重要物种,作为分布最广泛和最丰富的土壤微生物中的一个突出群体,在维持土壤生态系统和促进植物生长方面发挥着至关重要的作用。这项调查揭示了他们特殊的大核基因组特征,包括相当大的基因组大小,长内含子,和大量的基因复制。还阐明了与各个生命阶段之间的转换相关的基因表达谱和特定生物学功能。绝大多数与生命阶段转换相关的基因都受到强烈的净化选择,从新分离和深度测序的多个天然菌株推断。这证实了科尔波达的生活史的持久和保守的性质,在土壤中这些非常成功的原生动物的广泛进化史中一直存在。这些发现揭示了不断波动的土壤环境中微生物真核生物的进化动力学。这项综合研究在理解这些未被研究的单细胞真核生物的生活史方面取得了重大进展。
    Microorganisms play a central role in sustaining soil ecosystems and agriculture, and these functions are usually associated with their complex life history. Yet, the regulation and evolution of life history have remained enigmatic and poorly understood, especially in protozoa, the third most abundant group of organisms in the soil. Here, we explore the life history of a cosmopolitan species-Colpoda steinii. Our analysis has yielded a high-quality macronuclear genome for C. steinii, with size of 155 Mbp and 37,123 protein-coding genes, as well as mean intron length of ~93 bp, longer than most other studied ciliates. Notably, we identify two possible whole-genome duplication events in C. steinii, which may account for its genome being about twice the size of C. inflata\'s, another co-existing species. We further resolve the gene expression profiles in diverse life stages of C. steinii, which are also corroborated in C. inflata. During the resting cyst stage, genes associated with cell death and vacuole formation are upregulated, and translation-related genes are downregulated. While the translation-related genes are upregulated during the excystment of resting cysts. Reproductive cysts exhibit a significant reduction in cell adhesion. We also demonstrate that most genes expressed in specific life stages are under strong purifying selection. This study offers a deeper understanding of the life history evolution that underpins the extraordinary success and ecological functions of microorganisms in soil ecosystems.IMPORTANCEColpoda species, as a prominent group among the most widely distributed and abundant soil microorganisms, play a crucial role in sustaining soil ecosystems and promoting plant growth. This investigation reveals their exceptional macronuclear genomic features, including significantly large genome size, long introns, and numerous gene duplications. The gene expression profiles and the specific biological functions associated with the transitions between various life stages are also elucidated. The vast majority of genes linked to life stage transitions are subject to strong purifying selection, as inferred from multiple natural strains newly isolated and deeply sequenced. This substantiates the enduring and conservative nature of Colpoda\'s life history, which has persisted throughout the extensive evolutionary history of these highly successful protozoa in soil. These findings shed light on the evolutionary dynamics of microbial eukaryotes in the ever-fluctuating soil environments. This integrative research represents a significant advancement in understanding the life histories of these understudied single-celled eukaryotes.
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