LDB3

LDB3
  • 文章类型: Journal Article
    LIM结构域结合3(LDB3)作为横纹肌特异性Z带选择性剪接蛋白,在哺乳动物骨骼肌发育中起重要作用,但其在禽类肌肉发育中的调控作用和分子机制尚不清楚。在这项研究中,我们重新分析了NCBIGEO数据库中发表的来自21个鸡组织的1415个样本的RNA测序数据集.首先,三种变体(LDB3-X,LDB3-XN1和LDB3-XN2)通过LDB3基因的选择性剪接产生在鸡骨骼肌中,其中LDB3-XN1和LDB3-XN2是新的变体。LDB3-X和LDB3-XN1来源于鸡骨骼肌E18-D7阶段的外显子跳跃,共有三个LIM域,但LDB3-XN2缺乏LIM域。我们的结果初步表明,LDB3的三个变体的形成受RBM20调控。根据体外和体内测定,三种剪接异构体在骨骼肌中具有不同的功能。最后,我们确定了不同变体通过与IGF2BP1和MYHC相互作用发挥不同作用的机制,促进鸡成肌细胞的增殖和分化,反过来调节鸡的肌生成。总之,这项研究揭示了三种LDB3变体在鸡肌生成和肌肉重塑中的不同作用,并通过蛋白质-蛋白质相互作用证明了它们的调节机制。
    LIM domain binding 3 (LDB3) serves as a striated muscle-specific Z-band alternatively spliced protein that plays an important role in mammalian skeletal muscle development, but its regulatory role and molecular mechanism in avian muscle development are still unclear. In this study, we reanalyzed RNA sequencing data sets of 1415 samples from 21 chicken tissues published in the NCBI GEO database. First, three variants (LDB3-X, LDB3-XN1, and LDB3-XN2) generated by alternative splicing of the LDB3 gene were identified in chicken skeletal muscle, among which LDB3-XN1 and LDB3-XN2 are novel variants. LDB3-X and LDB3-XN1 are derived from exon skipping in chicken skeletal muscle at the E18-D7 stage and share three LIM domains, but LDB3-XN2 lacks a LIM domain. Our results preliminarily suggest that the formation of three variants of LDB3 is regulated by RBM20. The three splice isomers have divergent functions in skeletal muscle according to in vitro and in vivo assays. Finally, we identified the mechanism by which different variants play different roles through interactions with IGF2BP1 and MYHC, which promote the proliferation and differentiation of chicken myoblasts, in turn regulating chicken myogenesis. In conclusion, this study revealed the divergent roles of three LDB3 variants in chicken myogenesis and muscle remodeling and demonstrated their regulatory mechanism through protein-protein interactions.
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  • 文章类型: Case Reports
    肌原纤维肌病(MFM)是一组影响骨骼肌和心肌的遗传异质性疾病。肌原纤维性肌病的特征是肌源性纤维的局灶性溶解和降解的肌源性纤维产物整合到包涵体中,通常富含desmin和许多其他蛋白质。在这里,我们报告了一例54岁女性,她的双侧大腿无力超过3年。根据肌肉活检结果和LDB3基因外显子8中存在新的突变,她被诊断为MFM。由LDB3基因突变引起的肌原纤维性肌病是非常罕见的,并且通常缺乏不同的临床特征,并且通常表现出缓慢的疾病进展。当考虑对MFM进行诊断时,特别是在复杂的常染色体显性肌病的情况下,肌肉活检不能明确显示MFM,临床医生利用基因检测作为诊断工具变得至关重要。
    Myofibrillar myopathies (MFMs) are a group of genetically heterogeneous diseases affecting the skeletal and cardiac muscles. Myofibrillar myopathies are characterized by focal lysis of myogenic fibers and integration of degraded myogenic fiber products into inclusion bodies, which are typically rich in desmin and many other proteins. Herein, we report a case of a 54-year-old woman who experienced bilateral thigh weakness for over three years. She was diagnosed with MFMs based on muscle biopsy findings and the presence of a novel mutation in exon 8 of the LDB3 gene. Myofibrillar myopathies caused by a mutation in the LDB3 gene are extremely uncommon and often lack distinct clinical characteristics and typically exhibit a slow disease progression. When considering a diagnosis of MFMs, particularly in complex instances of autosomal dominant myopathies where muscle biopsies do not clearly indicate MFMs, it becomes crucial for clinicians to utilize genetic test as a diagnostic tool.
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  • 文章类型: Letter
    暂无摘要。
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  • 文章类型: Case Reports
    这项研究的目的是确定先前健康患者猝死的分子机制。临床外显子组测序显示I536T-RBM20变异体,它改变了TTN的RNA剪接,是扩张型心肌病的病因。还在患者样品和对照样品中进行了综合RNA测序(RNA-seq)。比较心肌和骨骼肌的剪接异常。心脏和骨骼肌的RNA-seq分析显示LDB3而不是TTN的异常剪接。与对照样品相比,患者样品中异常包括LDB3的外显子11。已经在1型肌强直性营养不良(DM1)患者中报道了骨骼肌中这种异常的LDB3剪接模式。我们,因此,证实患者在DMPK中CTG重复序列扩大,诊断为基因DM1.这一发现表明,该无症状的亚临床DM1患者心脏猝死的分子机制之一可能是由于DMPK中的CTG重复序列引起的LDB3异常剪接,而不是RBM20变体。RNA-seq分析可用于确定心脏猝死的确切分子诊断。
    The aim of this study is to determine the molecular mechanism of sudden death in a previously healthy patient. Clinical exome sequencing revealed I536T-RBM20 variant, which alters RNA splicing of TTN and is causative for dilated cardiomyopathy. Comprehensive RNA sequencing (RNA-seq) was also performed in the patient samples and the control samples. Splicing abnormality was compared in cardiac muscle and skeletal muscle. RNA-seq analysis of the cardiac and skeletal muscle showed abnormal splicing of LDB3, not of TTN. Exon 11 of LDB3 was abnormally included in the patient samples compared with the control samples. This abnormal LDB3 splicing pattern in skeletal muscle has been reported in myotonic dystrophy type 1 (DM1) patients. We, thus, confirmed that the patient had expanded CTG repeat in DMPK and the diagnosis was genetically DM1. This finding suggest that one of the molecular mechanisms of sudden cardiac death in this asymptomatic subclinical DM1 patient might be LDB3 abnormal splicing due to the CTG repeat in DMPK, rather than RBM20 variant. RNA-seq analysis is useful to determine the exact molecular diagnosis for sudden cardiac death.
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  • 文章类型: Case Reports
    背景:先天性左心室室壁瘤和异常心脏小梁的共存并伴有基因突变以前没有报道。这里,我们报道1例LIM结构域结合3基因突变患者并发先天性左心室动脉瘤和显著的左心室小梁形成.
    方法:一名30岁的亚裔男子在心电图健康检查中出现阵发性窦性心动过速和Q波。在体格检查和血清学测试中没有具体发现。冠状动脉计算机断层扫描血管造影检查显示冠状动脉正常,无冠状动脉狭窄。左心室对比超声心动图和心脏磁共振均显示出罕见的特征,即根尖动脉瘤状的外袋状结构与左心室和突出的左心室小梁网的广泛连接。高通量测序检查显示LDB3基因中存在新的突变(c。C793>T;p.Arg265Cys)。
    结论:我们的发现表明,两种心脏病的表型表达,先天性左心室动脉瘤和突出的左心室小梁,虽然罕见,可与LDB3基因突变同时发生。先天性左心室动脉瘤和突出的左心室小梁可能具有相同的遗传背景。
    BACKGROUND: The coexistence of congenital left ventricular aneurysm and abnormal cardiac trabeculation with gene mutation has not been reported previously. Here, we report a case of coexisting congenital left ventricular aneurysm and prominent left ventricular trabeculation in a patient with LIM domain binding 3 gene mutation.
    METHODS: A 30-year-old Asian man showed paroxysmal sinus tachycardia and Q waves in an electrocardiogram health check. There were no specific findings in physical examinations and serological tests. A coronary-computed tomography angiography check showed normal coronary artery and no coronary stenosis. Both left ventricle contrast echocardiography and cardiac magnetic resonance showed rare patterns of a combination of an apical aneurysm-like out-pouching structure with a wide connection to the left ventricle and prominent left ventricular trabecular meshwork. High-throughput sequencing examinations showed a novel mutation in the LDB3 gene (c.C793>T; p.Arg265Cys).
    CONCLUSIONS: Our finding indicates that the phenotypic expression of two heart conditions, congenital left ventricular aneurysm and prominent left ventricular trabeculation, although rare, can occur simultaneously with LDB3 gene mutation. Congenital left ventricular aneurysm and prominent left ventricular trabeculation may share the same genetic background.
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  • 文章类型: Case Reports
    Mutations in the LDB3 gene have been identified in patients with Z-disc-associated, alternatively spliced, PDZ motif-containing protein (ZASP)-related myofibrillar myopathy (ZASP-MFM) characterized by late-onset distal myopathy with signs of cardiomyopathy and neuropathy. We describe an autosomal dominant inherited pedigree with ZASP-MFM that is in line with the typical phenotype of distal myopathy without cardiomyopathy and neuropathy, while mild asymmetrical muscle atrophy can be observed in some affected members. Muscle MRI revealed considerable fatty degeneration involved in the posterior compartment of thigh and lower leg, but relatively preserved in rectus femoris, sartorius, gracilis, adductor longus and biceps femoris breve muscles in the later stage. In addition, fatty infiltration of medial gastrocnemius muscle can be initiated as early as in the third decade in asymptomatic individuals. Myopathological features showed sarcoplasmic accumulation of multiple protein deposits and electron dense filamentous bundle aggregates. A novel heterozygous missense mutation (p.N155H) in a highly conserved PDZ-like motif of ZASP was identified. The results indicate that typical ZASP-MFM presenting with late-onset distal myopathy is commonly associated with mutations in PDZ-like motif of ZASP. The development of fatty degeneration is consistent with the typical pattern of ZASP-MFM, and the initial fatty infiltration might be started from medial gastrocnemius muscle. Our study expands the clinical and mutational spectrum of ZASP-MFM.
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  • 文章类型: Journal Article
    BACKGROUND: Myocarditis occasionally is related to arrhythmogenic right ventricular dysplasia (ARVD) and sometimes overlaps during the early stages, which may lead to misdiagnosis. Acute myocarditis may reflect an active phase of ARVD.
    OBJECTIVE: The purpose of this study was to evaluate the genetic basis of myocarditis in ARVD and to investigate the association with a poorer prognosis and a higher risk of ventricular arrhythmias.
    METHODS: Two groups were analyzed: group A, which consisted of 131 affected patients-84 with ARVD (62% male, age 45 years [range 33-55 years]) and 47 with left-sided forms (arrhythmogenic left ventricular dysplasia [ALVD]) (47% male, age 45 years [range 25-61 years]); and group B, which consisted of 64 nonaffected mutation-carrying relatives (36% male, age 42 years [range 22-56 years]; 23 from classic ARVD families and 41 from ALVD families).
    RESULTS: Seven patients (3.5%) presented with a clinical diagnosis of acute myocarditis over median follow-up of 34 months. Myocarditis was the first clinical presentation in 6 of 7 cases. In 2 patients, acute myocarditis preceded worsening of left ventricular systolic function. In 1 case, myocarditis was associated with an increased gadolinium pattern in cardiac magnetic resonance. Two patients presented with ECG changes weeks after myocarditis resolution. Myocarditis preceded the development of ventricular tachycardia in 2 other patients. Myocarditis clustered in families bearing DSP Q447* and LDB3 c.1051A>G.
    CONCLUSIONS: Acute myocarditis reflects an active phase of ARVD that leads to changes in phenotype and abrupt progression of the disease. An active phase should be suspected in a patient with myocarditis associated with a family history of ARVD. Certain mutations may increase the susceptibility to superimposed myocarditis in ARVD.
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  • 文章类型: Case Reports
    Arrhythmogenic right ventricular cardiomyopathy (ARVC) is an important cause of malignant arrhythmia and sudden death particularly in young people. Although it is considered a desmosomal disease, mutations in non-desmosomal genes have also been identified. We report on a family where a mutation in LDB3 is associated with this condition. The index case and first and second degree relatives underwent a complete clinical evaluation: physical examination, electrocardiography (ECG), signal-averaged ECG, 2D echocardiogram, cardiac magnetic resonance and 24-h monitoring. After ruling out mutations in the five desmosomal genes, genetic testing by means of Next Generation Sequencing was carried out on the proband. A heterozygous missense mutation in LDB3 c.1051A>G was identified. This result was confirmed by subsequent Sanger DNA sequencing. Another six carriers were identified amongst her relatives. Three subjects fulfilled the criteria for a definitive diagnosis of ARVC and one reached a borderline diagnosis. In conclusion, this is the first family with ARVC where a mutation in LDB3 is associated with ARVC. Next generation sequencing arises as a particular useful tool to point to new causative genes in ARVC.
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  • 文章类型: Evaluation Study
    Extensive proteolysis takes place during the processing of dry-cured ham due to the action of muscle peptidases. The aim of this work was to study the degradation of LIM domain binding protein 3 (LDB3), which is located at the Z-lines of the sarcomere, at different times during the Spanish dry-cured ham processing (2, 3.5, 5, 6.5, and 9 months). A total of 107 peptides have been identified by mass spectrometry, most of them generated from the first region of the protein sequence (position 1-90) providing evidence for the complexity and variability of proteolytic reactions throughout the whole process of dry-curing. Methionine oxidation has been observed in several peptides by the end of the process. The potential of some of the identified peptides to be used as biomarkers of dry-cured ham processing has also been considered.
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