K-Ras mutations

  • 文章类型: Journal Article
    高迁移率族蛋白1(HMGB1)受输出蛋白1(XPO1)依赖的核输出,它参与了与免疫疗法抗性有关的功能。我们研究了HMGB1mRNA表达是否与非小细胞肺癌(NSCLC)对免疫检查点抑制剂(ICI)的反应相关。
    从用ICI治疗的晚期NSCLC患者的预处理活检中分离RNA。几个基因的基因表达分析,包括HMGB1,使用NanoString计数器分析系统(PanCancer免疫分析小组)进行。在EGFR和KRAS突变细胞系中进行蛋白质印迹分析和细胞活力测定。在鼠Lewis肺癌模型中确定ICI与XPO1阻断剂(selinexor)和曲美替尼组合的抗肿瘤作用的评估。
    接受ICI治疗的非小细胞肺癌患者的HMGB1mRNA水平与无进展生存期(PFS)相关(中位PFS9.0与18.0个月,P=0.008,高与低HMGB1的风险比=0.30)。TNF-α刺激后,HMGB1在PC9细胞的细胞质中积累,但是这种积累可以通过使用selinexor或抗逆转录病毒药物来预防。EGFR突变细胞中的厄洛替尼或奥希替尼联合selinexor和KRAS突变细胞中的曲美替尼联合selinexor消除肿瘤细胞增殖。Selinexor与PD-1抑制剂一起使用或不使用曲美替尼可以消除小鼠Lewis肺癌模型中的肿瘤生长。
    对HMGB1mRNA和蛋白功能的深入探索有望发现新的潜在靶点,为联合ICI治疗转移性NSCLC提供依据。
    UNASSIGNED: High-mobility group box 1 protein (HMGB1) is subject to exportin 1 (XPO1)-dependent nuclear export, and it is involved in functions implicated in resistance to immunotherapy. We investigated whether HMGB1 mRNA expression was associated with response to immune checkpoint inhibitors (ICI) in non-small cell lung cancer (NSCLC).
    UNASSIGNED: RNA was isolated from pretreatment biopsies of patients with advanced NSCLC treated with ICI. Gene expression analysis of several genes, including HMGB1, was conducted using the NanoString Counter analysis system (PanCancer Immune Profiling Panel). Western blotting analysis and cell viability assays in EGFR and KRAS mutant cell lines were carried out. Evaluation of the antitumoral effect of ICI in combination with XPO1 blocker (selinexor) and trametinib was determined in a murine Lewis lung carcinoma model.
    UNASSIGNED: HMGB1 mRNA levels in NSCLC patients treated with ICI correlated with progression-free survival (PFS) (median PFS 9.0 versus 18.0 months, P=0.008, hazard ratio=0.30 in high versus low HMGB1). After TNF-α stimulation, HMGB1 accumulates in the cytoplasm of PC9 cells, but this accumulation can be prevented by using selinexor or antiretroviral drugs. Erlotinib or osimertinib with selinexor in EGFR-mutant cells and trametinib plus selinexor in KRAS mutant abolish tumor cell proliferation. Selinexor with a PD-1 inhibitor with or without trametinib abrogates the tumor growth in the murine Lewis lung cancer model.
    UNASSIGNED: An in-depth exploration of the functions of HMGB1 mRNA and protein is expected to uncover new potential targets and provide a basis for treating metastatic NSCLC in combination with ICI.
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  • 文章类型: Journal Article
    西妥昔单抗(Cet)和奥沙利铂(OXA)用作结直肠癌(CRC)患者的一线药物。事实上,CRC的异质性,主要由K-ras突变和耐药性引起,破坏药物的有效性。最近,疏水性前药,(1E,4E)-6-((S)-1-(异戊氧基)-4-甲基戊-3-烯-1-基)-5,8-二甲氧基萘-1,4-二酮二肟(DMAKO-20),已显示经历肿瘤特异性CYP1B1催化的生物活化。此过程导致产生一氧化氮和活性萘醌单肟,对耐药CRC表现出特异性抗肿瘤活性。在这项研究中,构建了Cet缀合的生物响应DMAKO-20/PCL-PEOz靶向纳米共递送系统(DMAKO@PCL-PEOz-Cet),以解决DMAKO-20溶解的问题,并实现了货物向不同亚型的CRC细胞的多靶向递送,以克服CRC中的K-ras突变和耐药性。实验结果表明,DMAKO@PCL-PEOz-Cet通过靶向表皮生长因子受体(EGFR)有效地将DMAKO-20递送至K-ras突变体和野生型CRC细胞。它在K-ras突变细胞和耐药细胞中表现出比OXA更高的抗癌作用。此外,观察到DMAKO@PCL-PEOz-Cet降低了CRC细胞中谷胱甘肽过氧化物酶4(GPX4)的表达,并显着抑制了异质HCT-116皮下肿瘤和患者来源的肿瘤异种移植物(PDX)模型肿瘤的生长。这项工作为开发安全有效的CRC治疗方法提供了新的策略。重要声明:(1)意义:这项工作报道了一种新的治疗结直肠癌(CRC)的方法,使用生物负责的Cet偶联PCL-PEOz/DMAKO-20纳米递送系统(DMAKO@PCL-PEOz-Cet)与Cet和PCL-PEOz一起制备,用于DMAKO-20的靶向转移,甚至可以预防多药野生型和K-ras突变型CRC细胞。DMAKO@PCL-PEOz-Cet,以纳米晶胶束的形式,维持外周血的稳定性,并有效地将DMAKO-20转运至各种亚型的结直肠癌细胞,克服K-ras突变和耐药性带来的挑战。该系统的安全和有效的交付能力也已在类器官和PDX模型中得到证实。(2)这是首次报道,表明该方法同时克服了CRC的K-ras突变和耐药性。
    Cetuximab (Cet) and oxaliplatin (OXA) are used as first-line drugs for patients with colorectal carcinoma (CRC). In fact, the heterogeneity of CRC, mainly caused by K-ras mutations and drug resistance, undermines the effectiveness of drugs. Recently, a hydrophobic prodrug, (1E,4E)-6-((S)-1-(isopentyloxy)-4-methylpent-3-en-1-yl)-5,8-dimethoxynaphthalene-1,4‑dione dioxime (DMAKO-20), has been shown to undergo tumor-specific CYP1B1-catalyzed bioactivation. This process results in the production of nitric oxide and active naphthoquinone mono-oximes, which exhibit specific antitumor activity against drug-resistant CRC. In this study, a Cet-conjugated bioresponsive DMAKO-20/PCL-PEOz-targeted nanocodelivery system (DMAKO@PCL-PEOz-Cet) was constructed to address the issue of DMAKO-20 dissolution and achieve multitargeted delivery of the cargoes to different subtypes of CRC cells to overcome K-ras mutations and drug resistance in CRC. The experimental results demonstrated that DMAKO@PCL-PEOz-Cet efficiently delivered DMAKO-20 to both K-ras mutant and wild-type CRC cells by targeting the epidermal growth factor receptor (EGFR). It exhibited a higher anticancer effect than OXA in K-ras mutant cells and drug-resistant cells. Additionally, it was observed that DMAKO@PCL-PEOz-Cet reduced the expression of glutathione peroxidase 4 (GPX4) in CRC cells and significantly inhibited the growth of heterogeneous HCT-116 subcutaneous tumors and patient-derived tumor xenografts (PDX) model tumors. This work provides a new strategy for the development of safe and effective approaches for treating CRC. STATEMENT OF SIGNIFICANCE: (1) Significance: This work reports a new approach for the treatment of colorectal carcinoma (CRC) using the bioresponsible Cet-conjugated PCL-PEOz/DMAKO-20 nanodelivery system (DMAKO@PCL-PEOz-Cet) prepared with Cet and PCL-PEOz for the targeted transfer of DMAKO-20, which is an anticancer multitarget drug that can even prevent drug resistance, to wild-type and K-ras mutant CRC cells. DMAKO@PCL-PEOz-Cet, in the form of nanocrystal micelles, maintained stability in peripheral blood and efficiently transported DMAKO-20 to various subtypes of colorectal carcinoma cells, overcoming the challenges posed by K-ras mutations and drug resistance. The system\'s secure and effective delivery capabilities have also been confirmed in organoid and PDX models. (2) This is the first report demonstrating that this approach simultaneously overcomes the K-ras mutation and drug resistance of CRC.
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  • 自从Ras蛋白被发现作为第一个人类癌基因以来,已经过去了40年。它们仍然是调节哺乳动物细胞生长的最重要基因之一,并参与超过四分之一的人类癌症。在Ras超家族的167名成员中,KRas突变在人类癌症中是最丰富的。特别是,已知K-RasG12C突变与胰腺有关,结肠癌和肺癌以及白血病。虽然取得了进展,靶向Ras蛋白用于治疗目的的方法仍然具有挑战性。目前市场上没有治疗Ras相关癌症的药物。然而,现在人们对Ras地区重新产生了兴趣,和较新的方法强调了几种类型的肿瘤的靶向和治疗癌症患者。这篇综述将总结最近的K-Ras候选药物和临床前的方法,临床和临床后管道显示出靶向和减少Ras相关肿瘤的希望。大分子如mRNA疫苗,siRNA和靶向Ras的T细胞受体也将被讨论。较新的分子和最近要讨论的方法表明,Ras蛋白的“不可用”时代可能即将结束。
    It has almost been 40 years since the Ras proteins were discovered as the first human oncogenes. They remain among the most important genes for regulating mammalian cell growth and are involved in more than a quarter of human cancers. Out of 167 members of the Ras superfamily, KRas mutations are the most abundant in human cancers. Particularly, the K-Ras G12C mutations are known to be involved in pancreatic, colon and lung cancers as well as leukemias. Though progress has been made, approaches targeting Ras proteins for therapeutic purposes remain challenging. No drugs treating Ras-related cancers are currently on the market. However, there is now renewed interest in the Ras area, and newer approaches have highlighted the targeting of several types of tumors and treating cancer patients. This review will summarize recent K-Ras drug candidates and approaches in the preclinical, clinical and post-clinical pipelines that show promise for targeting and reducing Ras-related tumors. Macromolecules such as mRNA vaccines, siRNA, and T-cell receptors that target Ras will also be discussed. The newer molecules and the recent approaches to be discussed suggest that the \"undruggable\" era of Ras proteins could be coming to an end.
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  • 文章类型: Journal Article
    目的评估原发性和转移性肿瘤组织中结肠腺癌的可操作基因组景观。方法本研究使用美国癌症研究协会(AACR)项目基因组学证据瘤形成信息交换(GENIE)的数据。选择具有原发性和转移性组织样品(远处器官和淋巴结)的结肠腺癌患者。有局部复发样本的患者,没有其他指定的肿瘤样本,且未收集用于采样定位的数据被排除.结果共有3286例和1727例患者被纳入原发和转移组织样本组,分别。两组之间的Kirsten大鼠肉瘤病毒致癌基因同源物(KRAS)突变率没有差异。原发性肿瘤组织中v-Raf鼠肉瘤病毒癌基因同源物B(BRAF)和错配修复(MMR)基因突变的发生率高于转移性肿瘤组织。在其他可操作的基因改变(例如ERBB2扩增和神经营养受体酪氨酸激酶(NTRK)1和NTRK3融合)中,组间也没有差异。与所有队列相比,在亚洲和黑人患者中,原发性和转移性肿瘤组织之间的可操作基因组景观没有差异。结论本研究对原发性和转移性肿瘤组织中可行的基因组改变进行评估的结肠癌患者数量最多。BRAF和MMR基因改变在原发性肿瘤组织中比在转移性肿瘤组织中更频繁。
    Aim To assess the actionable genomic landscape of colon adenocarcinoma in the primary and metastatic tumor tissues. Methods The data from the American Association for Cancer Research (AACR) Project Genomics Evidence Neoplasia Information Exchange (GENIE) were used in this study. Colon adenocarcinoma patients with primary and metastatic tissue samples (distant organ and lymph node) were selected. Patients with samples from a local recurrence, not otherwise specified tumor samples, and data not collected for sampling localization were excluded. Results A total of 3286 and 1727 patients were included in the primary and metastatic tissue sample groups, respectively. There was no difference between the groups in Kirsten rat sarcoma viral oncogene homolog (KRAS) mutation rates. The rates of v-Raf murine sarcoma viral oncogene homolog B (BRAF) and mismatch repair (MMR) gene mutations were higher in the primary tumor tissues than in the metastatic tumor tissues. There was also no difference between the groups in other actionable gene alterations (e.g. ERBB2 amplification and neurotrophic receptor tyrosine kinase (NTRK) 1 and NTRK3 fusions). In contrast to all cohorts, in Asian and black patients, there was no difference in actionable genomic landscape between the primary and metastatic tumor tissues. Conclusion This study had the largest number of colon cancer patients that evaluated the actionable genomic alterations in primary and metastatic tumor tissues. BRAF and MMR gene alterations were more frequent in the primary tumor tissues than the metastatic tumor tissues.
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  • 文章类型: Journal Article
    Background Colorectal cancer (CRC) is one of the leading types of cancer worldwide and in Saudi Arabia. At the molecular level, CRC is very complicated and requires establishing comprehensive patient stratification models through identification of patients who will benefit or will not benefit from targeted therapy. We retrospectively investigated and analyzed the frequency of Kirsten-ras (K-ras) mutation and its correlation with patients\' characteristics as weel as its association with clinicopathological features (i.e age, gender, clinical stage, anatomical site, histological subtype, degree of histological differentiation and metastatic site) in patients with CRC. Methods Medical records and paraffin-embedded tumor samples from 51 patients with histologically proven colorectal adenocarcinoma referred to Madinah center in Saudi Arabia were analyzed for the occurrence of rat sarcoma virus (RAS) mutations. Results RAS mutations occurred in 43% of the patients; 91% of these mutations were in K-ras. Seventy-five percent of these K-ras mutations were in codon 12, most commonly p.G12D. Codon 13 mutations occurred in 20% of tumors: all of these were p.G13D (100%). The percentage of K-ras mutations occurrence was higher in young patients (≤50) compared with the older patients (>50) (54.5% and 35%, respectively). Similarly, the percentage of K-ras mutations occurrence was higher in the right-sided tumors compared with the left-sided tumors (57.1% and 32.4%, respectively). Patients\' characteristics and clinicopathological features were not significantly associated with K-ras mutations. Conclusions K-ras mutations are common among Saudi patients diagnosed with CRC in Madinah, especially pG12V and pG12D in codon 12. Further investigation would be required to establish correlation of K-ras mutations in larger cohorts.
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  • 文章类型: Journal Article
    晚期(转移性)非小细胞肺癌(NSCLC)的治疗目前主要基于抗PD-1或PD-L1抗体的免疫治疗,或联合化疗。在局部晚期NSCLC和早期切除阶段,还采用了免疫疗法。通过免疫组织化学的肿瘤PD-L1表达被认为是标准实践。反应率很低,在绝大多数报道的研究中,中位无进展生存期非常短。在这里,描述了NSCLC的许多生物学方面,涉及驱动基因病变,突变和融合,PD-L1糖基化,非小细胞肺癌和肺腺癌(LUAD)的铁凋亡和代谢重新布线。新颖的概念,如免疫递质和神经递质在免疫逃避和肿瘤生长中的作用,坏死和焦亡的新生相关性,可能的新生物标志物,如gasderminD和gasderminE,LUAD中K-Ras突变的难题,随着人们对肝激酶B1(LKB1)和代谢途径的认识,包括其他人,也有评论。审查有助于特许不同的治疗解决方案,取决于主要的信号通路改变,以获得有效的免疫疗法。肿瘤PDCD1基因(编码PD-1)最近被描述,与肿瘤PD-L1(由PDCD1LG1编码)平衡。这样的描述解释了肿瘤的过度进展,这在几项研究中已经报道过,并成为应重新审视IHCPD-L1表达作为生物标志物的基本标准。
    Treatment of advanced (metastatic) non-small-cell lung cancer (NSCLC) is currently mainly based on immunotherapy with antibodies against PD-1 or PD-L1, alone, or in combination with chemotherapy. In locally advanced NSCLC and in early resected stages, immunotherapy is also employed. Tumor PD-L1 expression by immunohistochemistry is considered the standard practice. Response rate is low, with median progression free survival very short in the vast majority of studies reported. Herein, numerous biological facets of NSCLC are described involving driver genetic lesions, mutations ad fusions, PD-L1 glycosylation, ferroptosis and metabolic rewiring in NSCLC and lung adenocarcinoma (LUAD). Novel concepts, such as immune-transmitters and the effect of neurotransmitters in immune evasion and tumor growth, the nascent relevance of necroptosis and pyroptosis, possible new biomarkers, such as gasdermin D and gasdermin E, the conundrum of K-Ras mutations in LUADs, with the growing recognition of liver kinase B1 (LKB1) and metabolic pathways, including others, are also commented. The review serves to charter diverse treatment solutions, depending on the main altered signaling pathways, in order to have effectual immunotherapy. Tumor PDCD1 gene (encoding PD-1) has been recently described, in equilibrium with tumor PD-L1 (encoded by PDCD1LG1). Such description explains tumor hyper-progression, which has been reported in several studies, and poises the fundamental criterion that IHC PD-L1 expression as a biomarker should be revisited.
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  • 文章类型: Journal Article
    Mutation of the proto-oncogene K-Ras is one of the most common molecular mechanisms in non-small cell lung cancer. Many drugs for treating lung cancer have been developed, however, due to clinical observed K-Ras mutations, corresponding chemotherapy and targeted therapy for such mutation are not efficient enough. In this study, on the basis of the crystal structure of K-Ras, 21 analogues (TKR01-TKR21) containing urea or thiourea were rationally designed, which can effectively inhibit the lung cancer cell A549 growth. The designing of these compounds was based on the structure of K-Ras protein, and the related groups were replaced by bioisosteres to improve the affinity and selectivity. Biological testing revealed that compound TKR15 could significantly inhibit the proliferation of A549 cell with IC50 of 0.21 µM. Docking analysis showed that the TKR15 can effectively bind to the hydrophobic cavity and form a hydrogen bond with the Glu37. In addition, through flow apoptosis assay and immunofluorescence staining assay, it confirmed that this compound can inhibit A549 cell proliferation with the mechanism of blocking K-RasG12V protein and effector proteins interactions through the apoptotic pathway. In conclusion, our studies in finding novel potent compound (TKR15) with confirmed mechanism showed great potential for further optimisation and other medicinal chemistry relevant studies.
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  • 文章类型: Journal Article
    OBJECTIVE: Recent studies have suggested that k-RAS mutations are related to the response to epidermal growth factor receptor (EGFR) tyrosine-kinase inhibitions (TKIs) in advanced non-small cell lung cancer (NSCLC) treatment. The aim of this meta-analysis was to assess the relationship between smoking history and k-RAS mutations in NSCLC treated with TKIs.
    METHODS: We searched MEDLINE and Web of Science up to 15 March 2014. The pooled relative risk (RR) was estimated by using fixed effect model or random effect model, according to heterogeneity between studies. We also carried out power analyses.
    RESULTS: We identified 12 studies with 1193 patients, including 196 patients (16.4%) with k-RAS mutations. The pooled k-RAS mutations incidence was 22.8% (174/764) in patients with smoke expose vs. 5.4% (23/429) in those with no smoke exposure. The pooled RR was 2.991 (95% CI: 1.884-4.746; Z = 4.65, p = 0.000). No publication bias was found (Begg\'s test: z = 1.09, p = 0.274 and Egger\'s test: t = 1.38, p = 0.201). In subgroup analyses, the pooled RR was 3.336 (95% CI: 1.925-5.779; Z = 4.30, p = 0.000) in the Caucasian subgroup, while in the Asian subgroup the pooled RR was 2.093 (95% CI: 0.909-4.822; Z = 1.73, p = 0.083), but the sample size was underpowered (0.465).
    CONCLUSIONS: The current meta-analysis found that smoking was related to increased incidence of k-RAS mutations in non-small cell lung cancer treated with TKIs. This may be further evidence that smoking will lead to a worse prognosis in NSCLC patients treated with TKIs.
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  • 文章类型: Journal Article
    OBJECTIVE: To develop a convenient and sensitive point-of-care test for detecting gene mutations based on allele-specific PCR.
    RESULTS: To develop a lateral flow strip for visual detection of K-ras mutations based on a modified PCR, a specific DNA tag was covalently linked to the 5\'-end of each primer by a nine-carbon linker to produce a sticky end. One of the sticky ends of the PCR products bound to gold nano-particles, while the other sticky end was captured onto a nitrocellulose membrane of lateral flow strips. The lateral flow strip showed a great sensitivity, which detected mutations in as low as 10 tumor cells. The positive rate and accuracy of the lateral flow strip for blood samples were over 92 and 96 %, respectively.
    CONCLUSIONS: The lateral flow strip provides an easy method for sensitive detection of gene mutations based on allele specific-PCR.
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  • 文章类型: Journal Article
    BACKGROUND: K-ras codon 12 mutation is one of the earliest genetic changes in the development of pancreatic cancer (PC) and accurate detection of K-ras mutations is gaining increasing attention in the field of molecular diagnosis.
    METHODS: Original research articles which evaluated the diagnostic accuracy of K-ras mutation detection in PC were selected. Data were presented as forest plots and summary receiver operating characteristic curve analysis was used to summarize the overall test performance.
    RESULTS: We assessed 16 studies from 15 published articles. The pooled sensitivity and specificity were 59% (95%CI: 54%-64%) and 87% (95%CI: 84%-89%), respectively. The pooled positive likelihood ratio and negative likelihood ratio were 4.13 (95%CI: 2.73-6.25) and 0.42 (95%CI: 0.32-0.56), respectively, and the pooled diagnostic odds ratio was 13.66 (95% CI: 7.25-25.74).
    CONCLUSIONS: Our results indicate that the analysis of K-ras mutations in pancreatic juice has a considerable diagnostic value in PC. Further studies with rigorous design, large sample size, and multi-regional co-operation are needed.
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