Insect

昆虫
  • 文章类型: Journal Article
    雌性蝗虫在柔软的基质中产卵,以保护它们免受捕食者的侵害,并为成功的发育和孵化提供最佳条件。在产卵挖掘期间,女性的腹部被汇集并延伸到地面,在其尖端的专用挖掘机制的指导下,包括两对专门的挖掘阀。关于这些主动阀如何应对其路径上遇到的各种障碍知之甚少。在这项研究中,雌性蝗虫在带有预先插入的3D打印塑料障碍物的专用沙子填充管中产卵。调查了腹部和挖掘阀门在遇到障碍物时采取的地下路线,characterized,与没有障碍物的控制管相比。数据是通过目测获得的,通过在高清模式下利用锥形束计算机断层扫描,并通过制作产卵洞穴的石蜡模型(卵孵化后)。我们证明,第一次,雌性蝗虫挖掘机制的地下导航能力及其在产卵过程中规避障碍物的能力。最后,我们讨论了主动感觉运动机制与阀门被动体现功能的作用,中央控制,和决策。
    The female locust lays its eggs deep within soft substrate to protect them from predators and provide optimal conditions for successful development and hatching. During oviposition digging, the female\'s abdomen is pooled and extends into the ground, guided by a dedicated excavation mechanism at its tip, comprising two pairs of specialized digging valves. Little is known about how these active valves negotiate the various obstacles encountered on their path. In this study, female locusts oviposited their eggs in specialized sand-filled tubes with pre-inserted 3D-printed plastic obstacles. The subterranean route taken by the abdomen and digging valves upon encountering the obstacles was investigated, characterized, and compared to that in control tubes without obstacles. Data were obtained by way of visual inspection, by utilizing cone beam computed tomography scans in high-definition mode, and by making paraffin casts of the oviposition burrows (after egg hatching). We demonstrate, for the first time, the subterranean navigation ability of the female locust\'s excavation mechanism and its ability to circumvent obstacles during oviposition. Finally, we discuss the role of active sensory-motor mechanisms versus the passive embodied function of the valves, central control, and decision-making.
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  • 文章类型: Journal Article
    节肢动物拥有复杂的微生物群,在宿主健康中起着关键作用。虽然多重因素,比如宿主物种和饮食,塑造节肢动物的微生物群,它们对野生昆虫群落聚集的影响在很大程度上仍然未知。在这项研究中,我们调查了9种具有共同柑橘类水果饮食的同胞野生昆虫的细菌和真菌群落组装。来源追踪分析表明,这些昆虫不同程度地从柑橘果实中获取了一些细菌和真菌。尽管共享共同的饮食会导致微生物群趋同,多样性,composition,在接受调查的昆虫群体中,细菌和真菌群落的网络差异很大。零模型分析表明,随机过程,特别是扩散限制和漂移,是构建昆虫细菌和真菌群落的主要驱动因素。重要的是,每个群落聚集过程的影响因宿主物种而异。因此,我们提出了一个推测性的观点,即微生物组和分枝杆菌组组装的宿主特异性在野生昆虫中普遍存在,尽管它们共享相同的区域物种库。总的来说,这项研究巩固了宿主物种在塑造微生物群和分枝杆菌群中的重要性,为它们在野生昆虫中的组装机制提供了新的见解。
    目的:由于微生物组已被证明会影响昆虫的适应性,对社区组装的机械理解具有潜在的重要应用,但在很大程度上仍未探索。在本文中,我们调查了9种具有共同饮食的同伴野生昆虫的细菌和真菌群落组装。主要发现表明,随机过程驱动了9种同胞野生昆虫物种中微生物群和真菌群的分化。这些发现为野生昆虫中微生物组和分枝杆菌的组装机制提供了新的见解。
    Arthropods harbor complex microbiota that play a pivotal role in host fitness. While multiple factors, like host species and diet, shape microbiota in arthropods, their impact on community assembly in wild insects remains largely unknown. In this study, we surveyed bacterial and fungal community assembly in nine sympatric wild insect species that share a common citrus fruit diet. Source tracking analysis suggested that these insects acquire some bacteria and fungi from the citrus fruit with varying degrees. Although sharing a common diet led to microbiota convergence, the diversity, composition, and network of both bacterial and fungal communities varied significantly among surveyed insect groups. Null model analysis indicated that stochastic processes, particularly dispersal limitation and drift, are primary drivers of structuring insect bacterial and fungal communities. Importantly, the influence of each community assembly process varied strongly depending on the host species. Thus, we proposed a speculative view that the host specificity of the microbiome and mycobiome assembly is widespread in wild insects despite sharing the same regional species pool. Overall, this research solidifies the importance of host species in shaping microbiomes and mycobiomes, providing novel insights into their assembly mechanisms in wild insects.
    OBJECTIVE: Since the microbiome has been shown to impact insect fitness, a mechanistic understanding of community assembly has potentially significant applications but remains largely unexplored. In this paper, we investigate bacterial and fungal community assembly in nine sympatric wild insect species that share a common diet. The main findings indicate that stochastic processes drive the divergence of microbiomes and mycobiomes in nine sympatric wild insect species. These findings offer novel insights into the assembly mechanisms of microbiomes and mycobiomes in wild insects.
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  • 文章类型: Journal Article
    精油(EO)是目前用于控制节肢动物的天然产品,它们与昆虫气味结合蛋白(OBP)的相互作用是发现新驱虫剂的基础。这项计算机模拟研究旨在预测EO成分与气味蛋白相互作用的潜力。使用AutoDockVina将来自PubChem的总共684种EO组分与来自蛋白质数据库的23种气味结合蛋白对接。分别使用高斯09和Sybyl-X2.0优化配体和蛋白质。使用LigandScout4.0表征了蛋白质-配体相互作用的性质,并通过Pymol进行了所选复合物中结合模式的可视化。此外,使用Gromacs对分子对接中具有最佳结合能的复合物进行了500ns的分子动力学模拟。1DQE-阿魏啶(-11kcal/mol)和2WCH-kauene(-11.2kcal/mol)复合物获得最佳的结合亲和力值。两者都是天然配体,与DEET在相同的结合位点停靠在这些蛋白质上,一种著名的驱虫剂.这项研究确定了kaurene和ferutidine可能是天然驱虫剂的候选药物,为DEET等合成化学品提供了潜在的替代品。
    Essential oils (EOs) are natural products currently used to control arthropods, and their interaction with insect odorant-binding proteins (OBPs) is fundamental for the discovery of new repellents. This in silico study aimed to predict the potential of EO components to interact with odorant proteins. A total of 684 EO components from PubChem were docked against 23 odorant binding proteins from Protein Data Bank using AutoDock Vina. The ligands and proteins were optimized using Gaussian 09 and Sybyl-X 2.0, respectively. The nature of the protein-ligand interactions was characterized using LigandScout 4.0, and visualization of the binding mode in selected complexes was carried out by Pymol. Additionally, complexes with the best binding energy in molecular docking were subjected to 500 ns molecular dynamics simulations using Gromacs. The best binding affinity values were obtained for the 1DQE-ferutidine (-11 kcal/mol) and 2WCH-kaurene (-11.2 kcal/mol) complexes. Both are natural ligands that dock onto those proteins at the same binding site as DEET, a well-known insect repellent. This study identifies kaurene and ferutidine as possible candidates for natural insect repellents, offering a potential alternative to synthetic chemicals like DEET.
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  • 文章类型: Journal Article
    钙成像的最新进展,包括开发快速和敏感的基因编码指标,用于宽场成像的高分辨率相机芯片,和激光扫描显微镜中的共振扫描镜,显着提高了功能成像分析的时间和空间分辨率。尽管如此,成像方法和大脑结构的可变性挑战了多功能和可靠的分割方法的发展。标准技术,例如手动选择感兴趣的区域或机器学习解决方案,经常由于任何一种用户偏见而达不到目标,系统之间的不可转移性,或计算需求。为了克服这些问题,我们开发了CalciSeg,一种数据驱动和可重复的无监督功能钙成像数据分割方法。CalciSeg通过提供基于两个参数的自动图像分割的计算高效解决方案来解决与大脑结构变异性和用户偏见相关的挑战:区域大小限制和细化迭代次数。我们在不同复杂性的数据集上评估了CalciSeg的功效,不同的昆虫种类(蝗虫,蜜蜂,和蟑螂),和成像系统(宽视场,共焦,和多光子),显示了我们方法的稳健性和一般性。最后,CalciSeg的用户友好性质和开源可用性有助于将该算法集成到现有的分析管道中。
    Recent advances in calcium imaging, including the development of fast and sensitive genetically encoded indicators, high-resolution camera chips for wide-field imaging, and resonant scanning mirrors in laser scanning microscopy, have notably improved the temporal and spatial resolution of functional imaging analysis. Nonetheless, the variability of imaging approaches and brain structures challenges the development of versatile and reliable segmentation methods. Standard techniques, such as manual selection of regions of interest or machine learning solutions, often fall short due to either user bias, non-transferability among systems, or computational demand. To overcome these issues, we developed CalciSeg, a data-driven and reproducible approach for unsupervised functional calcium imaging data segmentation. CalciSeg addresses the challenges associated with brain structure variability and user bias by offering a computationally efficient solution for automatic image segmentation based on two parameters: regions\' size limits and number of refinement iterations. We evaluated CalciSeg efficacy on datasets of varied complexity, different insect species (locusts, bees, and cockroaches), and imaging systems (wide-field, confocal, and multiphoton), showing the robustness and generality of our approach. Finally, the user-friendly nature and open-source availability of CalciSeg facilitate the integration of this algorithm into existing analysis pipelines.
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  • 文章类型: Journal Article
    Tetanops肌畸形,甜菜根虫(SBRM),是甜菜的一种毁灭性昆虫病原体,世界上仅有的两种广泛生产糖的植物之一,占美国糖的55%和全球原糖的35%,美国年农场价值为30亿美元。T.Myopaefis能够导致作物完全失败,使其研究变得重要。之前发布的SBRM基因组,TmSBRM_v1.0是从分离自北达科他州田间生长的普通芽孢杆菌的从头组装的T.myopaeforms基因组序列中产生的,美国。这里给出了T.myopaeforms的注释。注释的T.myopaefis基因组应该有助于了解这种昆虫的生物学和开发这种病原体的新控制策略,与果蝇等遗传生物模型的关系,并为利益相关者提供甜菜的农艺改良,同时还提供有关SBRM与气候变化之间关系的信息。
    Tetanops myopaeformis, the sugar beet root maggot (SBRM), is a devastating insect pathogen of sugar beet, one of only two plants in the world from which sugar is widely produced, accounting for 55% of U.S. sugar and 35% of global raw sugar with an annual farm value of $3 billion in the United States. T. myopaeformis is capable of causing total crop failure, making its study important. The previously released SBRM genome, TmSBRM_v1.0, has been generated from the de novo assembled draft genome sequence of T. myopaeformis isolated that was isolated from field-grown B. vulgaris in North Dakota, USA. The annotation of the T. myopaeformis is presented here. The annotated T. myopaeformis genome should be useful in understanding the biology of this insect and the development of new control strategies for this pathogen, relationship to model genetic organisms like Drosophila melanogaster and aid in agronomic improvement of sugar beet for stakeholders while also providing information on the relationship between the SBRM and climate change.
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  • 文章类型: Journal Article
    厌氧原生生物经常携带产甲烷古细菌,这显然有助于宿主的发酵代谢消耗过量的H2。然而,在许多情况下,内共生产甲烷菌的生态特性仍然难以捉摸。在这里,我们研究了白蚁的后肠中Cononypha原生生物的内共生产甲烷菌的生态学和基因组。显微镜和16SrRNA扩增子测序分析显示,单一物种,此处指定为“念珠菌甲氧菌”,与Cononymphaleidyi和Cononymphakoidzumii有关,并且其在Cononympha细胞中的感染率在白蚁菌落中从0.0%到99.8%不等。精细网络分析表明,多个16SrRNA序列变体共存于单个宿主细胞中,并且在Cononympha物种和肠壁中均存在相同的变体。因此,“Ca。共生体是兼性内生体,垂直传播,与肠道环境频繁交流。的确,透射电子显微镜显示产甲烷菌从Cononympha细胞逃逸或吸收。“Ca的基因组。信烯杆菌“显示出与其兼性生活方式一致的特征:即,基因组大小(2.7Mbp)与自由生活的亲戚相当;甲酸脱氢酶基因fdhA的假基因化,在非产甲酸的宿主细胞内是不必要的;依赖宿主细胞中丰富的乙酸作为必需碳源;以及过氧化氢酶基因的存在,需要在微氧肠壁上定植。我们的研究揭示了产甲烷菌和原生生物之间的多才多艺的内共生关系,这可能是一种应对白蚁肠道条件变化的策略。
    Anaerobic protists frequently harbour methanogenic archaea, which apparently contribute to the hosts\' fermentative metabolism by consuming excess H2. However, the ecological properties of endosymbiotic methanogens remain elusive in many cases. Here we investigated the ecology and genome of the endosymbiotic methanogen of the Cononympha protists in the hindgut of the termite Coptotermes formosanus. Microscopic and 16S rRNA amplicon sequencing analyses revealed that a single species, designated here \"Candidatus Methanobrevibacter cononymphae\", is associated with both Cononympha leidyi and Cononympha koidzumii and that its infection rate in Cononympha cells varied from 0.0% to 99.8% among termite colonies. Fine-scale network analysis indicated that multiple 16S rRNA sequence variants coexisted within a single host cell and that identical variants were present in both Cononympha species and also on the gut wall. Thus, \"Ca. Methanobrevibacter cononymphae\" is a facultative endosymbiont, transmitted vertically with frequent exchanges with the gut environment. Indeed, transmission electron microscopy showed escape or uptake of methanogens from/by a Cononympha cell. The genome of \"Ca. Methanobrevibacter cononymphae\" showed features consistent with its facultative lifestyle: i.e., the genome size (2.7 Mbp) comparable to those of free-living relatives; the pseudogenization of the formate dehydrogenase gene fdhA, unnecessary within the non-formate-producing host cell; the dependence on abundant acetate in the host cell as an essential carbon source; and the presence of a catalase gene, required for colonization on the microoxic gut wall. Our study revealed a versatile endosymbiosis between the methanogen and protists, which may be a strategy responding to changing conditions in the termite gut.
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  • 文章类型: Journal Article
    高质量的精子细胞对于动物中雄性和交配后雌性的繁殖成功至关重要。精子活力,定义为有活力的精子细胞的比例,被用作精子质量指数,该方法为生殖策略的研究提供了新的见解。然而,目前的染色方案可能会低估生存能力,这是由于细胞处理引起的细胞损伤,例如高染料浓度和长时间安装后。在这项研究中,我们建立了一种能够快速评估精子活力的方法,精子细胞毒性低,并提供精确的结果,无论操作员的专业知识,使用蚂蚁的精子细胞具有成本效益,Osakensis(膜翅目)。首先,为了缩短观察足够数量的精子细胞的时间,每个视野的体积增加了载玻片和盖玻片之间的高度高度,因此,我们增加了视野中精子细胞的数量。第二,为了减少精子细胞的毒性,除了SYBR14和碘化丙啶(PI)外,我们还使用吖啶橙(AO)和Hoechst优化了最小染料浓度和孵育时间,已在大多数以前的研究中使用。我们确定了最佳方案为1µg/mLAO和150µMPI,无需孵育。此外,我们使用ImageJ软件自动计数精子细胞,并结合手动校正以获得更准确的结果。我们采用了改进的方法从粉虫甲虫(黄粉虫)和蚕蛾(Bombyxmori)中提取精子样本。这种方法,通过我们的研究,将推进生殖策略的研究,包括女性的精子竞争和精子质量维持。
    High-quality sperm cells are crucial to reproductive success for both males and post-mating females in animals. Sperm viability, defined as the proportion of viable sperm cells, is used as a sperm quality index and this method has provided new insights into research on reproductive strategies. However, current staining protocols could potentially underestimate viability due to cell damage caused by cell treatments such as high dye concentration and long time for post-mounting. In this study, we established a method that enables rapid sperm viability assessment, has low sperm cell toxicity, and provides precise results regardless of operator expertise, and cost-effective using sperm cells from an ant, Crematogaster osakensis (Hymenoptera). First, to shorten the time for observation of a sufficient number of sperm cells, the volume per field of view was increased by height elevation between the glass slide and the coverslip, thereby we increased the number of sperm cells in a field of view. Second, to reduce sperm cell toxicity, we optimized the minimum dye concentration and incubation time using acridine orange (AO) and Hoechst in addition to SYBR14 and propidium iodide (PI), which has been used in most previous studies. We determined the optimal protocol to be 1 µg/mL AO and 150 µM PI without incubation. Besides, we automated counting sperm cells with ImageJ software and combined with manual correction for more accurate results. We employed the improved method for sperm samples from mealworm beetles (Tenebrio molitor) and silkmoths (Bombyx mori). This method, established through our study, will advance research on reproductive strategies, including sperm competition and sperm quality maintenance in females.
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  • 文章类型: Journal Article
    嗜线虫是一种革兰氏阴性细菌,与土壤线虫SteinernemaCarpocapsae相互关联,这种线虫-细菌复合体寄生于广泛的昆虫。转录调节因子OxyR在细菌中广泛保守,并激活一组影响细胞防御氧化应激的基因的转录。它还与几种细菌病原体的毒力有关。这项研究的目的是鉴定X。嗜线虫OxyR调节子并研究其在细菌生命周期中的作用。在X.线虫中构建了oxyR突变体,并在与其线虫伴侣重新结合后在体外和体内进行了表型表征。OxyR在X.线虫体外抗氧化应激中起主要作用。转录组分析允许鉴定与亲本菌株相比在oxyR突变体中差异调节的59个基因。在体内,oxyR突变体能够与对照菌株一样有效地与线虫重新结合。这些带有oxyR突变共生体的线虫-细菌复合物能够在侵染后不到48小时内迅速杀死昆虫幼虫,这表明,除OxyR以外的其他因素也可以使X.线虫应对在昆虫感染的这一阶段遇到的氧化应激。与对照菌株相比,与X.nematophilaoxyR突变体重新关联时,线虫-细菌复合物的后代数量显着增加,这表明OxyR在细菌生命周期的共生阶段具有潜在作用。
    Xenorhabdus nematophila is a Gram-negative bacterium, mutualistically associated with the soil nematode Steinernema carpocapsae, and this nemato-bacterial complex is parasitic for a broad spectrum of insects. The transcriptional regulator OxyR is widely conserved in bacteria and activates the transcription of a set of genes that influence cellular defence against oxidative stress. It is also involved in the virulence of several bacterial pathogens. The aim of this study was to identify the X. nematophila OxyR regulon and investigate its role in the bacterial life cycle. An oxyR mutant was constructed in X. nematophila and phenotypically characterized in vitro and in vivo after reassociation with its nematode partner. OxyR plays a major role during the X. nematophila resistance to oxidative stress in vitro. Transcriptome analysis allowed the identification of 59 genes differentially regulated in the oxyR mutant compared to the parental strain. In vivo, the oxyR mutant was able to reassociate with the nematode as efficiently as the control strain. These nemato-bacterial complexes harbouring the oxyR mutant symbiont were able to rapidly kill the insect larvae in less than 48 h after infestation, suggesting that factors other than OxyR could also allow X. nematophila to cope with oxidative stress encountered during this phase of infection in insect. The significantly increased number of offspring of the nemato-bacterial complex when reassociated with the X. nematophila oxyR mutant compared to the control strain revealed a potential role of OxyR during this symbiotic stage of the bacterial life cycle.
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  • 文章类型: Journal Article
    昆虫作为回收工具的潜力最近引起了人们的关注。在这项研究中,几丁质用1M盐酸在20℃提取24小时,然后在90°C下加入1MNaOH5小时,并用2.5%v/vNaOCl在20°C下从饲喂柑橘废物生物质(OP)或聚苯乙烯泡沫(PS)的Zophobasmorio(ZM)昆虫中漂白2小时。OP组存活率最高。报告了所得几丁质材料的性质,以及使用DMAc/LiCl溶剂制备水凝胶。获得的所有几丁质都是α-几丁质。脱乙酰度,结晶度分子量,PS和生物质饲料在DMAc/LiCl中的溶解度相似,并且它们在DMAc/LiCl溶液中显示出相似的粘度。获得的所有水凝胶具有相似的性质和粘弹性行为,表明从ZM得到的几丁质及其水凝胶在用柑橘生物质喂养的和用PS喂养的相似。
    The potential of insects as a recycling tool has recently attracted attention. In this study, chitin was extracted with 1 M HCl for 24 h at 20 °C, followed by 1 M NaOH for 5 h at 90 °C, and bleached with 2.5% v/v NaOCl for 2 h at 20 °C from Zophobas morio (ZM) insects fed citrus waste biomass (OP) or polystyrene foam (PS). The highest survival rate was found in the OP group. The properties of the resulting chitin material are reported, as well as the preparation of hydrogels using a DMAc/LiCl solvent. All chitins obtained were α-chitin. The degrees of deacetylation, crystallinity, molecular weight, and solubility in DMAc/LiCl were similar between the PS and biomass feeds, and they showed similar viscosities in the DMAc/LiCl solution. All hydrogels obtained had similar properties and viscoelastic behavior, indicating that the resultant chitins and their hydrogels from ZM were similar between those fed with citrus biomass and those fed with PS.
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  • 文章类型: Journal Article
    UDP-N-乙酰葡糖胺焦磷酸化酶(UAP)催化己糖胺生物合成途径的最后一步,直接产生UDP-N-乙酰葡糖胺(UDP-GlcNAc)。由于UAP在生物体中发挥重要的生理和病理作用,它们被认为是药物和农药开发的潜在目标。然而,缺乏有效和选择性的抑制剂是必须克服的瓶颈。这项研究报告了与UDP-GlcNAc复合的节食夜蛾(SfUAP)昆虫UAP的第一个晶体结构。SfUAP在活动袋中具有两个昆虫特有的结构特征,即,一个游离的Cys(Cys334)和一个Mg2+结合位点,在底物和抑制剂结合方面将其与人类UAP(HsAGX1)和真菌UAP(AfUAP)区分开。N-(4-硝基苯基)马来酰亚胺(pNPMI)和杨梅素被发现是SfUAP的有效共价和非共价抑制剂,分别。此外,杨梅素可以通过抑制UAP和O-GlcNAc转移酶显著降低细胞O-GlcNAc的水平。这些发现为基于UAP的药物和农药的开发提供了新的见解。
    UDP-N-acetylglucosamine pyrophosphorylase (UAP) catalyzes the last step in the hexosamine biosynthesis pathway to directly produce UDP-N-acetylglucosamine (UDP-GlcNAc). Because UAPs play important physiological and pathological roles in organisms, they are considered potential targets for drug and pesticide development. However, the lack of efficient and selective inhibitors is a bottleneck that must be overcome. This study reports the first crystal structure of the insect UAP from Spodoptera frugiperda (SfUAP) in complex with UDP-GlcNAc. SfUAP has two insect-specific structural characteristics in the active pocket, namely, a free Cys (Cys334) and a Mg2+ binding site, which differentiate it from human UAP (HsAGX1) and fungal UAP (AfUAP) in terms of substrate and inhibitor binding. N-(4-Nitrophenyl)maleimide (pNPMI) and myricetin are discovered as potent covalent and noncovalent inhibitors of SfUAP, respectively. Moreover, myricetin can significantly reduce the level of cellular O-GlcNAcylation by inhibiting both UAP and O-GlcNAc transferase. These findings provide novel insights into the development of UAP-based drugs and pesticides.
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