■猪三角洲冠状病毒(PDCoV),一种全球分布的新兴猪肠致病性冠状病毒,主要感染新生仔猪严重腹泻,呕吐,脱水,甚至死亡,给养猪业造成巨大的经济损失。然而,PDCoV感染的潜在致病机制以及PDCoV感染对宿主转录本和代谢产物的影响尚不完全清楚.
本研究通过LC/MS和RNA-seq技术研究了PDCoV感染后猪肠上皮细胞(IPEC-J2)的组合转录组和代谢组学分析。在PDCoV感染的对照组中,总共检测到1,401个差异表达基因和254个差异积累的代谢物。模拟感染。
■我们发现PDCoV感染调节与多个信号通路相关的基因集,包括神经活性配体-受体相互作用,细胞因子-细胞因子受体相互作用,MAPK信号通路,趋化因子信号通路,ras信号通路等。此外,代谢组学结果表明,辅因子的生物合成,核苷酸代谢,蛋白质消化吸收,PDCoV感染涉及氨基酸的生物合成。此外,综合转录组学和代谢组学分析揭示了铁凋亡参与PDCoV感染,外源添加铁凋亡激活剂erastin可显着抑制PDCoV的复制。总的来说,这些独特的转录和代谢重编程特征可能有助于更好地了解PDCoV感染的IPEC-J2细胞和抗病毒治疗的潜在靶点.
UNASSIGNED: Porcine deltacoronavirus (PDCoV), an emerging swine enteropathogenic coronavirus with worldwide distribution, mainly infects newborn piglets with severe diarrhea, vomiting, dehydration, and even death, causing huge economic losses to the pig industry. However, the underlying pathogenic mechanisms of PDCoV infection and the effects of PDCoV infection on host transcripts and metabolites remain incompletely understood.
UNASSIGNED: This study investigated a combined transcriptomic and metabolomic analysis of porcine intestinal epithelial cells (IPEC-J2) following PDCoV infection by LC/MS and RNA-seq techniques. A total of 1,401 differentially expressed genes and 254 differentially accumulated metabolites were detected in the comparison group of PDCoV-infected vs. mock-infected.
UNASSIGNED: We found that PDCoV infection regulates gene sets associated with multiple signaling pathways, including the neuroactive ligand-receptor interaction, cytokine-cytokine receptor interaction, MAPK signaling pathway, chemokine signaling pathway, ras signaling pathway and so on. Besides, the metabolomic results showed that biosynthesis of cofactors, nucleotide metabolism, protein digestion and absorption, and biosynthesis of amino acid were involved in PDCoV infection. Moreover, integrated transcriptomics and metabolomics analyses revealed the involvement of ferroptosis in PDCoV infection, and exogenous addition of the ferroptosis activator erastin significantly inhibited PDCoV replication. Overall, these unique transcriptional and metabolic reprogramming features may provide a better understanding of PDCoV-infected IPEC-J2 cells and potential targets for antiviral treatment.