Glioma

神经胶质瘤
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  • 文章类型: Journal Article
    胶质瘤,成人中最常见的原发性脑肿瘤,具有显著的侵入性和抵抗力。目前的神经胶质瘤治疗包括手术,辐射,化疗,和靶向治疗,但是这些方法往往不能完全消除肿瘤,导致复发和预后不良。免疫检查点抑制剂,一类常用的免疫治疗药物,在治疗各种实体恶性肿瘤方面表现出优异的疗效。最近的研究表明,MAP2K3基因的非常规表达水平与胶质瘤的恶性程度密切相关。暗示它可能是潜在的免疫疗法靶标。我们的研究揭示了MAP2K3在神经胶质瘤中的大量参与,表明该酶作为与免疫相关的预后生物标志物的潜力。通过调节免疫细胞的浸润,MAP2K3能够影响胶质瘤患者的预后。这些发现为探索MAP2K3的生物学机制及其在胶质瘤治疗中的潜在应用奠定了理论基础。
    Glioma, the most prevalent primary brain tumor in adults, is characterized by significant invasiveness and resistance. Current glioma treatments include surgery, radiation, chemotherapy, and targeted therapy, but these methods often fail to eliminate the tumor completely, leading to recurrence and poor prognosis. Immune checkpoint inhibitors, a class of commonly used immunotherapeutic drugs, have demonstrated excellent efficacy in treating various solid malignancies. Recent research has indicated that unconventional levels of expression of the MAP2K3 gene closely correlates with glioma malignancy, hinting it could be a potential immunotherapy target. Our study unveiled substantial involvement of MAP2K3 in gliomas, indicating the potential of the enzyme to serve as a prognostic biomarker related to immunity. Through the regulation of the infiltration of immune cells, MAP2K3 can affect the prognosis of patients with glioma. These discoveries establish a theoretical foundation for exploring the biological mechanisms underlying MAP2K3 and its potential applications in glioma treatment.
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  • 文章类型: Journal Article

    神经胶质瘤,包括神经胶质细胞产生的肿瘤的分类,表现出不同的侵袭性,并取决于肿瘤的分级和分期。解开EGFR基因的改变,包括扩增(不变),删除,和错义突变(改变),出现在神经胶质瘤中。然而,对新出现的EGFR突变及其在神经胶质瘤中的作用的准确理解仍然有限.这项研究旨在确定神经胶质瘤患者中普遍存在的特定EGFR突变,并使用FDA批准的药物重新利用方法研究其作为治疗靶标的潜力。
    分析神经胶质瘤患者的数据以鉴定各种突变和存活率。使用分子对接和模拟对FDA批准的(1615)药物进行高通量虚拟筛选(HTVS)以确定潜在的命中。
    神经胶质瘤患者样本(n=4251)分析显示19%的EGFR改变,其中大多数错义突变位于外显子19的V774M。Kaplan-Meier图显示,未改变组的总生存率高于改变组。对接研究根据每个目标的较高对接分数得出最佳命中,最小自由能(MMGBSA),最小kd,ki,和IC50值。MD模拟及其轨迹表明,化合物ZINC000011679756靶向未改变的EGFR,ZINC000003978005靶向改变的EGFR,而ZINC000012503187(Conivaptan,苯并西平)和ZINC000068153186(Dabrafenib,氨基嘧啶)靶向两个EGFR。入围化合物表现出与各自靶标的有利残余相互作用,形成高度稳定的复合物。此外,根据ADMET分析的评估,这些入围化合物具有类似药物的特性。
    因此,化合物(ZINC000012503187和ZINC000068153186)可以有效地靶向两种未改变/改变的EGFR,作为多靶点治疗药物用于神经胶质瘤。

    UNASSIGNED: Neuroglioma, a classification encompassing tumors arising from glial cells, exhibits variable aggressiveness and depends on tumor grade and stage. Unraveling the EGFR gene alterations, including amplifications (unaltered), deletions, and missense mutations (altered), is emerging in glioma. However, the precise understanding of emerging EGFR mutations and their role in neuroglioma remains limited. This study aims to identify specific EGFR mutations prevalent in neuroglioma patients and investigate their potential as therapeutic targets using FDA-approved drugs for repurposing approach.
    UNASSIGNED: Neuroglioma patient\'s data were analyzed to identify the various mutations and survival rates. High throughput virtual screening (HTVS) of FDA-approved (1615) drugs using molecular docking and simulation was executed to determine the potential hits.
    UNASSIGNED: Neuroglioma patient samples (n=4251) analysis reveals 19% EGFR alterations with most missense mutations at V774M in exon 19. The Kaplan-Meier plots show that the overall survival rate was higher in the unaltered group than in the altered group. Docking studies resulted the best hits based on each target\'s higher docking score, minimum free energy (MMGBSA), minimum kd, ki, and IC50 values. MD simulations and their trajectories show that compounds ZINC000011679756 target unaltered EGFR and ZINC000003978005 targets altered EGFR, whereas ZINC000012503187 (Conivaptan, Benzazepine) and ZINC000068153186 (Dabrafenib, aminopyrimidine) target both the EGFRs. The shortlisted compounds demonstrate favorable residual interactions with their respective targets, forming highly stable complexes. Moreover, these shortlisted compounds have drug- like properties as assessed by ADMET profiling.
    UNASSIGNED: Therefore, compounds (ZINC000012503187 and ZINC000068153186) can effectively target both the unaltered/altered EGFRs as multi-target therapeutic repurposing drugs towards neuroglioma.
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  • 文章类型: Journal Article
    尽管进行了多模式治疗,但胶质母细胞瘤患者的预后仍然很差。已提出,高度脑浸润的生长与显着的治疗抵抗特别是间充质胶质母细胞瘤干细胞样细胞(GSC)的治疗抵抗一起导致治疗失败。最近,我们已经表明,患者来源的富含GSC(pGSC)培养物的间充质到前神经mRNA签名与体外放射抗性和凝胶侵袭相关。重要的是,这种pGSCmRNA特征对患者肿瘤复发模式和总生存期具有预后性。mRNA特征的两个间充质标记编码IKCa和BKCaCa2激活的K通道。因此,我们在此分析了在pGSC培养物和pGSC衍生的原位异种神经胶质瘤小鼠模型中,IKCa和BKCa靶向伴随(分级)照射对放射抗性和胶质母细胞瘤扩散的影响.为此,体外凝胶侵袭,克隆生存,体外和体内残留的DNA双链断裂(DSB),肿瘤生长,评估脑侵袭对肿瘤照射和K通道靶向的依赖性。因此,IKCa-和BKCa-阻断剂TRAM-34和帕西林,分别,在一些但不是所有的IKCa和BKCa表达pGSC培养物中,残留DSB的数量增加和(数字上)克隆形成的存活率降低,分别。此外,BKCa-而不是IKCa-阻断在体外减缓了凝胶侵袭。此外,在异种移植模型中,TRAM-34或帕西林的全身给药伴随分割的肿瘤照射增加了DSB的残余数量,并减弱了成胶质细胞瘤的脑侵袭和(在数值上)肿瘤生长。我们得出结论,KCa阻断联合分割放疗可能是胶质母细胞瘤治疗的一种有前景的新策略.
    Prognosis of glioblastoma patients is still poor despite multimodal therapy. The highly brain-infiltrating growth in concert with a pronounced therapy resistance particularly of mesenchymal glioblastoma stem-like cells (GSCs) has been proposed to contribute to therapy failure. Recently, we have shown that a mesenchymal-to-proneural mRNA signature of patient derived GSC-enriched (pGSC) cultures associates with in vitro radioresistance and gel invasion. Importantly, this pGSC mRNA signature is prognostic for patients\' tumor recurrence pattern and overall survival. Two mesenchymal markers of the mRNA signature encode for IKCa and BKCa Ca2+-activated K+ channels. Therefore, we analyzed here the effect of IKCa- and BKCa-targeting concomitant to (fractionated) irradiation on radioresistance and glioblastoma spreading in pGSC cultures and in pGSC-derived orthotopic xenograft glioma mouse models. To this end, in vitro gel invasion, clonogenic survival, in vitro and in vivo residual DNA double strand breaks (DSBs), tumor growth, and brain invasion were assessed in the dependence on tumor irradiation and K+ channel targeting. As a result, the IKCa- and BKCa-blocker TRAM-34 and paxilline, respectively, increased number of residual DSBs and (numerically) decreased clonogenic survival in some but not in all IKCa- and BKCa-expressing pGSC cultures, respectively. In addition, BKCa- but not IKCa-blockade slowed-down gel invasion in vitro. Moreover, systemic administration of TRAM-34 or paxilline concomitant to fractionated tumor irradiation increased in the xenograft model(s) residual number of DSBs and attenuated glioblastoma brain invasion and (numerically) tumor growth. We conclude, that KCa-blockade concomitant to fractionated radiotherapy might be a promising new strategy in glioblastoma therapy.
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  • 文章类型: Journal Article
    背景:胶质瘤被认为是中枢神经系统最常见的原发性恶性肿瘤。虽然传统的治疗方法没有取得令人满意的效果,最近,针对神经胶质瘤的靶向治疗已显示出有希望的疗效.然而,由于靶向治疗的单一靶点性质,传统的靶向治疗是无效的;因此,迫切需要新的治疗靶点。
    方法:神经胶质瘤患者的基因表达数据来自GEO(GSE4290,GSE50161),TCGA和CGGA数据库。接下来,从上述数据库获得的上调基因进行交叉分析,最后,10个重叠基因(BIRC5、FOXM1、EZH2、CDK1、KIF11、KIF4A、NDC80,PBK,最终筛选出RRM2和TOP2A),只有KIF4A的表达与神经胶质瘤患者的临床特征具有最强的相关性。Futher,利用TCGA和CGGA数据库探讨KIF4A表达与胶质瘤预后的相关性。然后,qRT-PCR和Westernblot检测胶质瘤细胞KIF4AmRNA和蛋白表达水平,分别。而靶向KIF4A的小分子抑制剂WZ-3146,通过Cmap分析进行筛选。随后,用MTT法测定KIF4A敲低或WZ-3146治疗对胶质瘤的影响,EdU,集落形成测定和Transwell测定。最终,进行GSEA富集分析,发现神经胶质瘤中的凋亡途径可以被KIF4A调节,此外,流式细胞术和Westernblot检测WZ-3146对胶质瘤细胞凋亡的影响。
    结果:在本研究中,我们证实KIF4A在神经胶质瘤中异常过度表达。此外,KIF4A过表达是胶质瘤预后的关键指标;抑制KIF4A的表达可以抑制胶质瘤的进展。我们还发现KIF4A的小分子抑制剂WZ-3146,可以诱导胶质瘤细胞凋亡并表现出抗胶质瘤作用。
    结论:结论:这些观察结果表明,靶向KIF4A可以抑制神经胶质瘤的进展.随着进一步的研究,KIF4A的小分子抑制剂WZ-3146,可与其他分子靶向药物联合协同抑制胶质瘤进展。
    BACKGROUND: Glioma is considered the most common primary malignant tumor of the central nervous system. Although traditional treatments have not achieved satisfactory outcomes, recently, targeted therapies for glioma have shown promising efficacy. However, due to the single-target nature of targeted therapy, traditional targeted therapies are ineffective; thus, novel therapeutic targets are urgently needed.
    METHODS: The gene expression data for glioma patients were derived from the GEO (GSE4290, GSE50161), TCGA and CGGA databases. Next, the upregulated genes obtained from the above databases were cross-analyzed, finally, 10 overlapping genes (BIRC5, FOXM1, EZH2, CDK1, KIF11, KIF4A, NDC80, PBK, RRM2, and TOP2A) were ultimately screened and only KIF4A expression has the strongest correlation with clinical characteristics in glioma patients. Futher, the TCGA and CGGA database were utilized to explore the correlation of KIF4A expression with glioma prognosis. Then, qRT-PCR and Western blot was used to detect the KIF4A mRNA and protein expression level in glioma cells, respectively. And WZ-3146, the small molecule inhibitor targeting KIF4A, were screened by Cmap analysis. Subsequently, the effect of KIF4A knockdown or WZ-3146 treatment on glioma was measured by the MTT, EdU, Colony formation assay and Transwell assay. Ultimately, GSEA enrichment analysis was performed to find that the apoptotic pathway could be regulated by KIF4A in glioma, in addition, the effect of WZ-3146 on glioma apoptosis was detected by flow cytometry and Western blot.
    RESULTS: In the present study, we confirmed that KIF4A is abnormally overexpressed in glioma. In addition, KIF4A overexpression is a key indicator of glioma prognosis; moreover, suppressing KIF4A expression can inhibit glioma progression. We also discovered that WZ-3146, a small molecule inhibitor of KIF4A, can induce apoptosis in glioma cells and exhibit antiglioma effects.
    CONCLUSIONS: In conclusion, these observations demonstrated that targeting KIF4A can inhibit glioma progression. With further research, WZ-3146, a small molecule inhibitor of KIF4A, could be combined with other molecular targeted drugs to cooperatively inhibit glioma progression.
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  • 文章类型: Case Reports
    目的:胶质瘤是来源于脑内多种细胞类型的高度异质性恶性肿瘤。虽然他们的确切病因往往是未知的,危险因素,例如化学暴露,辐射,和特定的不常见的遗传疾病已经确定。诊断通常需要影像学检查,如磁共振成像和计算机断层扫描,辅以活检确认,这可以通过基因检测进一步验证。
    方法:下一代测序技术揭示了根据肿瘤的分子特征诊断为多形性黄色星形细胞瘤的患者中细胞周期蛋白依赖性激酶抑制剂2A和B基因(CDKN2A和CDKN2B)的种系共缺失。根据这个结果,我们使用多重连接依赖性探针扩增技术对显示相同共缺失的母亲进行了集中的遗传分析.此外,由于父亲的神经内分泌胰腺癌,NGS技术的应用在BRCA1相互作用解旋酶1(BRIP1)基因中检测到致病性变异。在家族背景下进行的综合多基因检测,以各种各样的癌症类型为标志,揭示了一系列遗传倾向。
    结论:本案例研究强调了分子检测对肿瘤特征的重要性,并强调了基因检测在促进早期干预和筛查高危家庭成员中的关键作用。此外,癌症种系共缺失的鉴定为制定旨在恢复正常细胞调节和改善患者管理的靶向治疗策略奠定了基础.
    OBJECTIVE: Gliomas are highly heterogeneous malignancies originating from diverse cell types within the brain. Although their precise etiology is frequently unknown, risk factors, such as chemical exposure, radiation, and specific uncommon genetic disorders have been identified. Diagnosis typically entails imaging tests, such as magnetic resonance imaging and computed tomography, complemented by a biopsy for confirmation, which may be further validated through genetic testing.
    METHODS: Next-generation sequencing technology revealed germline co-deletion deletion of cyclin-dependent kinase inhibitor 2 A and B genes (CDKN2A and CDKN2B) in a patient diagnosed with pleomorphic xanthoastrocytoma based on the tumor\'s molecular characteristics. Following this result, we performed focused genetic analysis with use of multiplex ligation-dependent probe amplification technology for the mother that revealed the same co-deletion. Moreover, due to the father\'s neuroendocrine pancreatic cancer, application of the NGS technology detected a pathogenic variant in the BRCA1-interacting helicase 1 (BRIP1) gene. Comprehensive multi-gene testing conducted within the familial context, marked by a varied spectrum of cancer type, revealed a constellation of genetic predispositions.
    CONCLUSIONS: This case study underscores the critical importance of molecular testing for tumor characterization and highlights the pivotal role of genetic testing in facilitating early intervention and screening for at-risk family members. Furthermore, the identification of germline co-deletions in cancer lays the foundation for the development of targeted therapeutic strategies aimed at restoring normal cellular regulation and improving patient management.
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  • 文章类型: Journal Article
    胶质瘤是颅内最常见的原发性肿瘤,死亡率高,预后差。目的探讨NID2基因单核苷酸多态性(SNPs)对胶质瘤发病风险及预后的影响。通过AgenaMassARRAY质谱仪成功对529例神经胶质瘤患者和478例健康对照中的NID2的四个候选SNP进行了基因分型。使用Logistic回归评估不同遗传模型下NID2SNP与神经胶质瘤风险之间的关联。此外,通过Kaplan-Meier(KM)生存曲线和Cox比例风险回归分析,探讨NID2中风险相关SNPs与胶质瘤患者预后的关系.结果显示,rs11846847(OR1.24,p=0.017)和rs1874569(OR1.22,p=0.026)与胶质瘤风险增加显著相关,rs11846847对≤40岁参与者的神经胶质瘤也有增加风险的作用.rs11846847和rs1874569的交互作用模型更适合预测胶质瘤的发病风险。我们还发现rs1874569与神经胶质瘤患者的不良预后之间存在显着关联(HR1.32,p=0.039),尤其是CC基因型与高患者的总生存期(OS)和无进展生存期(PFS)相关。此外,研究表明,在中国汉族人群中,大体全切除或化疗可改善胶质瘤预后。本研究首次为NID2SNPs与神经胶质瘤风险和预后的相关性提供了证据,提示NID2变异可能是神经胶质瘤的潜在因素。
    Glioma is the most common primary intracranial tumor with high mortality and poor prognosis. The purpose of this study was to investigate how single-nucleotide polymorphisms (SNPs) of the NID2 gene affect glioma risk and prognosis. Four candidate SNPs of NID2 in 529 glioma patients and 478 healthy controls were successfully genotyped by Agena MassARRAY mass spectrometer. Logistic regression was utilized to assess the associations between NID2 SNPs and glioma risk under different genetic models. Furthermore, the relationship between risk-related SNPs in NID2 and the prognosis of glioma patients was explored through Kaplan-Meier (KM) survival curve and Cox proportional hazard regression analysis. The results showed that rs11846847 (OR 1.24, p = 0.017) and rs1874569 (OR 1.22, p = 0.026) were significantly associated with an increased risk of glioma, and rs11846847 also had a risk-increasing effect on glioma in participants ≤ 40 years old. The interaction model of rs11846847 and rs1874569 could be more suitable for forecasting glioma risk. We also discovered a significant association between rs1874569 and poor prognosis in glioma patients (HR 1.32, p = 0.039) and especially CC genotype was relevant to shorter overall survival (OS) and progression-free survival (PFS) in patients with high-grade glioma. Additionally, the study demonstrated that gross total resection or chemotherapy improve glioma prognosis in the Chinese Han population. This study is the first to provide evidence for the association of NID2 SNPs with glioma risk and prognosis, suggesting that NID2 variants might be potential factors for glioma.
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  • 文章类型: Journal Article
    神经胶质瘤脑图像中肿瘤区域的迅速和精确的识别和描绘对于减轻与这种危及生命的疾病相关的风险至关重要。在这项研究中,我们采用UNet卷积神经网络(CNN)架构进行胶质瘤肿瘤检测.我们提出的方法包括一个转换模块,特征提取模块,和肿瘤分割模块。脑磁共振成像图像的空间域表示通过非子采样Shearlet变换分解为低频和高频子带。利用此转换的选择性和指导性特征增强了我们提出的系统的分类功效。从低频和高频子带提取剪切特征,随后使用UNet-CNN架构进行分类,以识别神经胶质瘤脑图像中的肿瘤区域。我们使用公开可用的数据集验证我们提出的神经胶质瘤肿瘤检测方法,即脑肿瘤分割(BRATS)2019和癌症基因组图谱(TCGA)。我们的系统实现的平均分类率在BRATS2019数据集为99.1%,在TCGA数据集为97.8%。此外,我们的系统在BRATS2019数据集上展示了显著的性能指标,包括98.2%的灵敏度,98.7%的特异性,98.9%的准确度,98.7%的交叉超过并网,和98.5%的圆盘相似系数。同样,在TCGA数据集上,我们的系统达到97.7%的灵敏度,98.2%的特异性,98.7%的准确度,98.6%的交叉超过工会,椎间盘相似系数为98.4%。与最新方法的比较分析强调了我们提出的神经胶质瘤脑肿瘤检测方法的有效性。
    The prompt and precise identification and delineation of tumor regions within glioma brain images are critical for mitigating the risks associated with this life-threatening ailment. In this study, we employ the UNet convolutional neural network (CNN) architecture for glioma tumor detection. Our proposed methodology comprises a transformation module, a feature extraction module, and a tumor segmentation module. The spatial domain representation of brain magnetic resonance imaging images undergoes decomposition into low- and high-frequency subbands via a non-subsampled shearlet transform. Leveraging the selective and directive characteristics of this transform enhances the classification efficacy of our proposed system. Shearlet features are extracted from both low- and high-frequency subbands and subsequently classified using the UNet-CNN architecture to identify tumor regions within glioma brain images. We validate our proposed glioma tumor detection methodology using publicly available datasets, namely Brain Tumor Segmentation (BRATS) 2019 and The Cancer Genome Atlas (TCGA). The mean classification rates achieved by our system are 99.1% for the BRATS 2019 dataset and 97.8% for the TCGA dataset. Furthermore, our system demonstrates notable performance metrics on the BRATS 2019 dataset, including 98.2% sensitivity, 98.7% specificity, 98.9% accuracy, 98.7% intersection over union, and 98.5% disc similarity coefficient. Similarly, on the TCGA dataset, our system achieves 97.7% sensitivity, 98.2% specificity, 98.7% accuracy, 98.6% intersection over union, and 98.4% disc similarity coefficient. Comparative analysis against state-of-the-art methods underscores the efficacy of our proposed glioma brain tumor detection approach.
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  • 文章类型: Journal Article
    正电子发射断层扫描/计算机断层扫描(PET/CT)已极大地改变了非侵入性胶质瘤评估的景观,为通过磁共振成像(MRI)获得的信息提供补充见解。PET/CT扫描可以对神经胶质瘤生物学进行多方面的分析,支持从分级和鉴别诊断到绘制完整肿瘤范围以及规划后续治疗和评估的临床应用。有了各种各样的专业放射性示踪剂,研究人员和临床医生现在可以探索神经胶质瘤的各种生物学特征,例如葡萄糖的利用,细胞增殖,缺氧,氨基酸贩运,和反应性星形胶质增生。本综述旨在提供有关多功能PET/CT放射性示踪剂在神经胶质瘤研究和临床实践中的最新应用。
    Positron emission tomography/computed tomography (PET/CT) has dramatically altered the landscape of noninvasive glioma evaluation, offering complementary insights to those gained through magnetic resonance imaging (MRI). PET/CT scans enable a multifaceted analysis of glioma biology, supporting clinical applications from grading and differential diagnosis to mapping the full extent of tumors and planning subsequent treatments and evaluations. With a broad array of specialized radiotracers, researchers and clinicians can now probe various biological characteristics of gliomas, such as glucose utilization, cellular proliferation, oxygen deficiency, amino acid trafficking, and reactive astrogliosis. This review aims to provide a recent update on the application of versatile PET/CT radiotracers in glioma research and clinical practice.
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  • 文章类型: Journal Article
    这篇综述讨论了磁共振引导聚焦超声(MRgFUS)和其他超声平台在神经系统疾病和神经肿瘤学中瞬时渗透血脑屏障(BBB)的临床应用进展。从广泛的临床前研究开始,人体安全性试验,展示了令人放心的安全性,并为阿尔茨海默病的许多转化临床试验铺平了道路,帕金森病,原发性和转移性脑肿瘤。未来的方向包括改进超声输送设备,探索替代递送方法,如纳米液滴,并将其应用扩展到其他神经系统疾病。
    This review discusses the current progress in the clinical use of magnetic resonance-guided focused ultrasound (MRgFUS) and other ultrasound platforms to transiently permeabilize the blood-brain barrier (BBB) for drug delivery in neurological disorders and neuro-oncology. Safety trials in humans have followed on from extensive pre-clinical studies, demonstrating a reassuring safety profile and paving the way for numerous translational clinical trials in Alzheimer\'s disease, Parkinson\'s disease, and primary and metastatic brain tumors. Future directions include improving ultrasound delivery devices, exploring alternative delivery approaches such as nanodroplets, and expanding the application to other neurological conditions.
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