GZMB

GZMB
  • 文章类型: Journal Article
    CD4+T细胞在调节自身免疫性疾病中起关键作用,和肠道微生物代谢产物控制各种免疫反应。最近报道了产生颗粒酶B(GzmB)的CD4T细胞参与自身免疫性疾病的发病机理。这里,我们发现GzmbB缺陷的CD4+T细胞在Rag1-/-小鼠中诱导的结肠炎比野生型(WT)CD4+T细胞更严重.与无特定病原体(SPF)小鼠相比,无细菌(GF)小鼠在肠CD4+T细胞中表现出较低的GzmB表达。肠道微生物代谢产物丁酸增加CD4+T细胞中GzmB的表达,特别是在产生IL-10的Th1细胞中,通过HDAC抑制和GPR43,而不是GPR41和GPR109a。在T细胞转移模型中,与丁酸盐处理的WTCD4+T细胞相比,丁酸盐处理的GzmB缺陷型CD4+T细胞表现出更严重的结肠炎。丁酸酯改变了肠道微生物群组成,但是改变的微生物群不能介导丁酸盐诱导小鼠肠道CD4+T细胞表达GzmB。Blimp1参与产生IL-10的Th1细胞中GzmB的丁酸诱导。葡萄糖代谢,包括糖酵解和丙酮酸氧化,在Th1细胞中介导丁酸诱导GzmB。此外,我们发现IKZF3和NR2F6调节丁酸盐诱导的GzmB表达。一起,我们的研究强调了GzmB在介导肠道细菌代谢产物丁酸调节粘膜表面T细胞耐受中的关键作用.
    CD4+ T cells play a critical role in regulating autoimmune diseases, and intestinal microbial metabolites control various immune responses. Granzyme B (GzmB)-producing CD4+ T cells have been recently reported to participate in the pathogenesis of autoimmune diseases. Here, we found that GzmbB-deficient CD4+ T cells induced more severe colitis in Rag1-/- mice than wild-type (WT) CD4+ T cells. Germ-free (GF) mice exhibited a lower expression of GzmB in intestinal CD4+ T cells compared to specific pathogen-free (SPF) mice. Intestinal microbial metabolite butyrate increased GzmB expression in CD4+ T cells, especially in IL-10-producing Th1 cells, through HDAC inhibition and GPR43, but not GPR41 and GPR109a. Butyrate-treated GzmB-deficient CD4+ T cells demonstrated more severe colitis compared to butyrate-treated WT CD4+ T cells in the T cell transfer model. Butyrate altered intestinal microbiota composition, but altered microbiota did not mediate butyrate induction of intestinal CD4+ T cell expression of GzmB in mice. Blimp1 was involved in the butyrate induction of GzmB in IL-10-producing Th1 cells. Glucose metabolism, including glycolysis and pyruvate oxidation, mediated butyrate induction of GzmB in Th1 cells. In addition, we found that IKZF3 and NR2F6 regulated GzmB expression induced by butyrate. Together, our studies underscored the critical role of GzmB in mediating gut bacterial metabolite butyrate regulation of T cell tolerance at the mucosal surface.
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  • 文章类型: Journal Article
    鱼类生殖细胞移植在保护濒危物种方面具有巨大潜力,改善养殖鱼类品种,探索生殖技术。然而,移植效率低下是异种移植中普遍存在的问题。本研究将脂肪果绿(Hexagrammosotakii)精原细胞移植到斑点鲈鱼(Lateolabraxmaculatus)的睾丸中,以研究可能影响移植的异源生殖细胞定植和固定的因素。结果表明,在斑点鲈鱼的早期移植阶段成功检测到移植的脂肪绿色精原细胞。随着时间的推移,他们的数量逐渐减少,移植后10天,超过90%的移植细胞发生凋亡。移植后第1天和第10天斑点鲈鱼和脂肪绿色精原细胞睾丸的转录组测序分析显示,这种凋亡过程涉及许多免疫相关基因及其相关信号通路。在斑点鲈鱼睾丸中检测到急性免疫排斥标记基因prf1和gzmb,而免疫耐受基因lck和zap-70在脂肪绿色精原细胞中表达。此外,从斑点鲈鱼中筛选出prf1和gzmb基因的差异表达,实验证据表明,斑点鲈鱼的PRF1和GZMB蛋白主要通过线粒体凋亡途径诱导移植脂肪绿色精原细胞的凋亡,蛋白质水平。这表明异种移植的困难主要与急性免疫排斥有关,PRF1和GZMB发挥了重要作用。
    Fish germ cell transplantation holds great potential for conserving endangered species, improving cultured fish breeds, and exploring reproductive techniques. However, low transplantation efficiency is a common issue in heterotransplantation. This study transplanted fat greenling (Hexagrammos otakii) spermatogonia into the testes of spotted sea bass (Lateolabrax maculatus) to investigate factors that might affect the colonization and fixation of heterologous transplanted germ cells. Results indicated that transplanted fat greenling spermatogonia cells were successfully detected in the early transplantation phase in spotted sea bass. Their numbers gradually decreased over time, and after 10 days post-transplantation, more than 90% of the transplanted cells underwent apoptosis. Transcriptome sequencing analysis of the testes of spotted sea bass and fat greenling spermatogonia on days 1 and 10 post-transplantation revealed that this apoptosis process involved many immune-related genes and their associated signaling pathways. Acute immune rejection marker genes prf1 and gzmb were detected in the spotted sea bass testes, while immune tolerance genes lck and zap-70 were expressed in the fat greenling spermatogonia. Additionally, differential expression of prf1 and gzmb genes was screened from spotted sea bass, with experimental evidence indicating that PRF1 and GZMB protein from spotted sea bass primarily induce apoptosis in transplanted fat greenling spermatogonia via the mitochondrial apoptosis pathway, at the protein level. This suggests that the difficulties in heterotransplantation are primarily related to acute immune rejection, with PRF1 and GZMB playing significant roles.
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  • 文章类型: Journal Article
    本研究旨在检查解旋酶C结构域1(IFIH1)诱导的粒酶B(GZMB)和干扰素基因中的遗传变异是否与银屑病相关。
    牛皮癣,丘疹鳞状皮肤病,最初被认为是主要由表皮角质形成细胞引起的疾病,但现在被认为是最常见的免疫介导疾病之一。它是由多种遗传和环境风险因素之间的相互作用引起的。
    这项病例对照研究有65名银屑病患者和65名健康对照者。使用实时PCR对GZMB(rs8192917)和IFIH1(rs35667974)进行基因分型。
    两个SNP的基因型发生和等位基因传播处于Hardy-Weinberg平衡。rs35667974的基因型和等位基因分布在研究组之间没有差异。关于rs8192917,与第二组相比,I组中CC基因型和C等位基因有统计学意义的升高。在C/C和C/T基因型中检测到的PASI得分高于T/T基因型。单因素和多因素分析显示,BMI,过氧化氢酶,MDA,rs8192917(C/C)与银屑病相关。
    GZMBrs8192917与银屑病风险显著相关;其C等位基因同样与银屑病易损性相关。然而,我们的调查发现rs35667974和银屑病之间没有联系.
    UNASSIGNED: This study aims to examine whether the genetic variants in the genes for Granzyme B (GZMB) and Interferon Induced with Helicase C domain 1 (IFIH1) were associated with psoriasis.
    UNASSIGNED: Psoriasis, a papulosquamous skin disease, was initially thought of as a disorder primarily of epidermal keratinocytes but is now recognized as one of the most common immune-mediated disorders. It is caused by the interplay between multiple genetic and environmental risk factors.
    UNASSIGNED: This case-control study has 65 participants with psoriasis and 65 healthy controls. Real-time PCR was used to genotype GZMB (rs8192917) and IFIH1 (rs35667974).
    UNASSIGNED: Genotype occurrence and allelic spreading for both SNPs are in Hardy - Weinberg equilibrium. The genotype and allele distributions of rs35667974 showed no differences between the studied groups. Regarding rs8192917, compared to Group II, there is a statistically significant rise in the CC genotype and C allele in Group I. Higher PASI scores are detected in the C/C and C/T genotypes more than the T/T genotype. Univariate and multivariate analyses revealed that BMI, catalase, MDA, and rs8192917 (C/C) are associated with psoriasis.
    UNASSIGNED: GZMB rs8192917 was significantly related to psoriasis risk; its C allele is likewise associated with psoriasis vulnerability. However, our investigation found no link between rs35667974 and psoriasis.
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  • 文章类型: Journal Article
    人类2型先天淋巴样细胞(ILC2s)的治疗潜力尚未得到充分开发。虽然在小鼠ILC2s中没有观察到,我们发现人类ILC2s分泌颗粒酶B(GZMB)并通过诱导细胞凋亡和/或凋亡直接裂解肿瘤细胞,它受DNAM-1-CD112/CD155相互作用的控制,该相互作用使负调节因子FOXO1失活。随着时间的推移,CD155在急性髓系白血病细胞中的高表面密度表达损害了DNAM-1和GZMB的表达,从而允许免疫逃避。我们描述了一个可靠的平台,能够在4周内将人类ILC2扩展到2,000倍,其分子和细胞ILC2谱通过单细胞RNA测序进行验证。在白血病和实体瘤模型中,外源给药的扩增的人ILC2s在体内显示出显著的抗肿瘤作用。总的来说,我们证明了以前未报道的人类ILC2s的特性,并将这种先天免疫细胞亚群鉴定为溶细胞免疫效应细胞家族的成员。
    The therapeutic potential for human type 2 innate lymphoid cells (ILC2s) has been underexplored. Although not observed in mouse ILC2s, we found that human ILC2s secrete granzyme B (GZMB) and directly lyse tumor cells by inducing pyroptosis and/or apoptosis, which is governed by a DNAM-1-CD112/CD155 interaction that inactivates the negative regulator FOXO1. Over time, the high surface density expression of CD155 in acute myeloid leukemia cells impairs the expression of DNAM-1 and GZMB, thus allowing for immune evasion. We describe a reliable platform capable of up to 2,000-fold expansion of human ILC2s within 4 weeks, whose molecular and cellular ILC2 profiles were validated by single-cell RNA sequencing. In both leukemia and solid tumor models, exogenously administered expanded human ILC2s show significant antitumor effects in vivo. Collectively, we demonstrate previously unreported properties of human ILC2s and identify this innate immune cell subset as a member of the cytolytic immune effector cell family.
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  • 文章类型: Journal Article
    目的:本研究探讨了CX3CR1在人外周血T淋巴细胞及其亚群中的表达,探讨SLE患者的变化及其诊断潜力。
    方法:收集31名健康对照和50名SLE患者的外周血样本。来自SLE患者PBMC的RNA-Seq数据用于分析T细胞中的CX3CR1表达。流式细胞术测定SLE患者和健康对照中表达CX3CR1的T淋巴细胞亚群比例。GZMB的子集组成和存在,分析了GPR56和CX3CR1T淋巴细胞中的穿孔素。评估T细胞-临床指标相关性。ROC曲线探讨CX3CR1对SLE的诊断潜力。
    结果:CX3CR1+CD8+T细胞表现出更高的GPR56,穿孔素,和GZMB表达高于其他T细胞亚群。CX3CR1+在TEMRA中比例较高,在Tn和TCM中比例较低。PMA活化降低CX3CR1+T细胞比例。RNA-Seq和流式细胞术都显示SLE患者CX3CR1+T细胞比例升高。在SLE患者的CX3CR1CD8T细胞中观察到明显较低的穿孔素和GPR56比例。CX3CR1+T细胞与临床指标相关。
    结论:CX3CR1+T细胞表现出细胞毒性特征,在CD8+T细胞中表达增加,特别是成人SLE患者。SLE患者T细胞中CX3CR1表达的增加表明其作为SLE辅助诊断标志物的潜力。
    OBJECTIVE: This study investigated CX3CR1 expression in human peripheral blood T lymphocytes and their subsets, exploring changes in SLE patients and its diagnostic potential.
    METHODS: Peripheral blood samples from 31 healthy controls and 50 SLE patients were collected. RNA-Seq data from SLE patient PBMCs were used to analyze CX3CR1 expression in T cells. Flow cytometry determined CX3CR1-expressing T lymphocyte subset proportions in SLE patients and healthy controls. Subset composition and presence of GZMB, GPR56, and perforin in CX3CR1+ T lymphocytes were analyzed. T cell-clinical indicator correlations were assessed. ROC curves explored CX3CR1\'s diagnostic potential for SLE.
    RESULTS: CX3CR1+CD8+ T cells exhibited higher GPR56, perforin, and GZMB expression than other T cell subsets. The proportion of CX3CR1+ was higher in TEMRA and lower in Tn and TCM. PMA activation reduced CX3CR1+ T cell proportions. Both RNA-Seq and flow cytometry revealed elevated CX3CR1+ T cell proportions in SLE patients. Significantly lower perforin+ and GPR56+ proportions were observed in CX3CR1+CD8+ T cells in SLE patients. CX3CR1+ T cells correlated with clinical indicators.
    CONCLUSIONS: CX3CR1+ T cells display cytotoxic features, with heightened expression in CD8+ T cells, particularly in adult SLE patients. Increased CX3CR1 expression in SLE patient T cells suggests its potential as an adjunctive diagnostic marker for SLE.
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  • 文章类型: Observational Study
    背景:目前仍严重缺乏针对胰腺和其他壶腹周围腺癌的有效治疗策略。手术很少是可能的,使姑息化疗成为大多数患者的唯一选择。然而,化疗治疗往往伴随着严重的副作用,识别用于早期预测疾病和治疗相关症状的生物标志物可能有助于减轻患者的痛苦。这项研究调查了免疫相关血清蛋白之间的动态相互关系,常规生物标志物,和健康相关的生活质量(HRQoL)因素在化疗治疗的前瞻性患者,观察性研究化疗,壶腹周围癌(CHAMP)的宿主反应和分子动力学。
    方法:应用邻近延伸试验分析了75例患者纵向血清样本中的92种免疫相关蛋白,18例接受治疗,57例有姑息治疗。HRQoL数据可从所有患者的基线(BL),从三个月的41名患者中,以及六个月时的23名患者。有关常规实验室参数白蛋白的信息,从医学图表中收集CA19-9,CEA和CRP。
    结果:在总共9种蛋白质中;趋化因子(C-C基序)配体23(CCL23),分化簇4(CD4),分化簇28(CD28),decorin(DCN),半乳糖凝集素-1(Gal-1),颗粒酶B(GZMB),颗粒酶H(GZMH),基质金属肽酶7(MMP7),单核细胞趋化蛋白-1(MCP-1)与认知功能(DCN)密切相关(Spearman’sRho≤-0.6或≥0.6),情绪功能(DCN,MCP-1),呼吸困难(CD28,GZMB,GZMH)或治疗期间失眠(CCL23,CD4,Gal-1,MMP7)。常规实验室参数之间的关联(CA19-9,CA-125,CRP,CEA和白蛋白)和HRQoL因子整体较弱。研究的蛋白质均与疼痛无关。
    结论:这是,根据我们的知识,第一项研究探索胰腺癌或其他壶腹周围癌患者血清生物标志物与HRQoL之间的关系,一些发现值得进一步验证。DCN和MCP-1与认知和/或情绪功能受损的关联是特别感兴趣的。考虑到它们与各种神经退行性疾病的既定联系。已知化疗会导致持续性认知功能障碍,对记忆和执行功能产生影响,称为“化疗脑”。因此,鉴定用于这种衰弱状况的早期检测和管理的生物标志物将是非常有价值的。
    背景:临床试验注册:NCT03724994。
    BACKGROUND: There is still a profound lack of efficient therapeutic strategies against pancreatic and other periampullary adenocarcinoma. Surgery is seldom possible, leaving palliative chemotherapy the only option for most patients. Chemotherapy treatment is however often accompanied by serious side-effects, and the identification of biomarkers for early prediction of disease and treatment-associated symptoms could help alleviate patient suffering. This study investigated the dynamic interrelationship between immune-related serum proteins, routine biomarkers, and health-related quality of life (HRQoL) factors during chemotherapy treatment of patients enrolled in the prospective, observational study Chemotherapy, Host response And Molecular dynamics in Periampullary cancer (CHAMP).
    METHODS: Proximity extension assay was applied to analyse 92 immune-associated proteins in longitudinal serum samples from 75 patients, 18 treated with curative and 57 with palliative intent. HRQoL data were available from all patients at baseline (BL), from 41 patients at three months, and from 23 patients at six months. Information on routine laboratory parameters albumin, CA19-9, CEA and CRP were collected from medical charts.
    RESULTS: In total nine proteins; chemokine (C-C motif) ligand 23 (CCL23), cluster of differentiation 4 (CD4), cluster of differentiation 28 (CD28), decorin (DCN), galectin-1 (Gal-1), granzyme B (GZMB), granzyme H (GZMH), matrix metallopeptidase 7 (MMP7), and monocyte chemotactic protein-1 (MCP-1) were strongly correlated (Spearman\'s Rho ≤ -0.6 or ≥ 0.6) with either cognitive functioning (DCN), emotional functioning (DCN, MCP-1), dyspnoea (CD28, GZMB, GZMH) or insomnia (CCL23, CD4, Gal-1, MMP7) during treatment. Associations between routine laboratory parameters (CA 19-9, CA-125, CRP, CEA and albumin) and HRQoL factors were overall weaker. None of the investigated proteins were associated with pain.
    CONCLUSIONS: This is, to our knowledge, the first study exploring associations between serum biomarkers and HRQoL in patients with pancreatic or other periampullary cancer, and some findings merit further validation. The associations of DCN and MCP-1with impaired cognitive and/or emotional functioning are of particular interest, given their established link to various neurodegenerative conditions. Chemotherapy is known to cause persistent cognitive dysfunction with effects on memory and executive function, referred to as \"chemo brain\". It would therefore be of great value to identify biomarkers for early detection and management of this debilitating condition.
    BACKGROUND: Clinical Trial Registration: NCT03724994.
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  • 文章类型: Journal Article
    人颗粒酶B(GZMB)调节性B细胞(Bregs)通过部分依赖于GZMB的机制对CD4+效应T细胞具有抑制特性。此外,这些细胞可以很容易地在体外诱导,使它们对细胞治疗感兴趣。
    我们使用单细胞转录组学表征了该体外诱导的GZMB+Breg群体。为了调查它们的监管性质,还将Bregs或总B细胞与T细胞共培养,并使用scRNAseq鉴定受体配体相互作用并揭示T细胞中的基因表达变化。
    我们发现Bregs表现出一组独特的149个差异表达的基因,这些基因与增殖有关。凋亡,新陈代谢,和改变的抗原呈递能力与其分化的B细胞谱一致。值得注意的是,Bregs诱导与增殖相关的T细胞基因的强烈抑制,激活,与总B细胞相比,炎症和凋亡。我们鉴定并验证了Bregs和T细胞之间的受体/配体相互作用。使用特定抑制剂的功能分析用于测试它们的抑制特性,我们将淋巴毒素α(LTA)鉴定为与Breg抑制特性有关的新型有效Breg配体。
    我们首次报道了LTA在GZMB+Bregs中作为GZMB表达增强剂的作用,并参与人体内GZMB+Bregs的抑制特性。LTA/GZMB功能在Bregs的该特定子集中的确切机制尚待确定。
    Human Granzyme B (GZMB) regulatory B cells (Bregs) have suppressive properties on CD4+ effector T cells by a mechanism partially dependent on GZMB. Moreover, these cells may be easily induced in vitro making them interesting for cell therapy.
    We characterized this population of in vitro induced GZMB+Bregs using single cell transcriptomics. To investigate their regulatory properties, Bregs or total B cells were also co-cultured with T cells and scRNAseq was used to identify receptor ligand interactions and to reveal gene expression changes in the T cells.
    We find that Bregs exhibit a unique set of 149 genes differentially expressed and which are implicated in proliferation, apoptosis, metabolism, and altered antigen presentation capacity consistent with their differentiated B cells profile. Notably, Bregs induced a strong inhibition of T cell genes associated to proliferation, activation, inflammation and apoptosis compared to total B cells. We identified and validated 5 receptor/ligand interactions between Bregs and T cells. Functional analysis using specific inhibitors was used to test their suppressive properties and we identified Lymphotoxin alpha (LTA) as a new and potent Breg ligand implicated in Breg suppressive properties.
    We report for the first time for a role of LTA in GZMB+Bregs as an enhancer of GZMB expression, and involved in the suppressive properties of GZMB+Bregs in human. The exact mechanism of LTA/GZMB function in this specific subset of Bregs remains to be determined.
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  • 文章类型: Journal Article
    类风湿性关节炎(RA)是一种发病机制不明确的自身免疫性疾病。颗粒酶B(GZMB)已被报道为RA治疗的潜在治疗靶标,但其机制尚不清楚。本研究旨在探讨GZMB-Caspase-3-GSDME通路在RA进展中的分子机制。建立SD大鼠RA模型,采用Westernblot分析验证GZMB基因在RA大鼠中的高表达。然后对两种常见的RA细胞进行功能验证,HFLS-RA细胞和MH7A细胞,通过用GZMBsiRNA病毒抑制GZMB基因。CCK8和EDU法检测细胞增殖功能;LDH法检测细胞焦亡标志物;ELISA法检测炎症因子水平;Westernblot法检测GZMB及通路相关基因和蛋白的表达。GZMB沉默后,与对照组相比,细胞增殖减少,炎症因子IL-1b和IL-18,以及焦凋亡标志物LDH,IL-1b,和IL-18均降低。GZMB相关蛋白GZMB,caspase-3和GasderminE(GSDME)也降低。因此,GZMB沉默通过抑制caspase-3和GasderminE分解来减少焦亡。总之,GZMB沉默抑制caspase-3和GasderminE的活化,从而延缓RA的炎症。GZMB基因可能是RA的潜在治疗靶标。
    Rheumatoid arthritis (RA) is an autoimmune disease with an unclear pathogenesis. Granzyme B (GZMB) has been reported as a potential therapeutic target for RA treatment, but its mechanism remains unclear. This study aimed to explore the molecular mechanism of the GZMB-Caspase-3-GSDME pathway in the progression of RA. An SD rat model of RA was constructed, and Western blot analysis was used to verify the high expression of the GZMB gene in RA rats. Functional validation was then performed on two common RA cells, HFLS-RA cells and MH7A cells, by inhibiting the GZMB gene with the GZMB siRNA virus. Cell proliferation function was measured by CCK8 and EDU assays; cell pyroptosis markers were detected by the LDH assay; inflammation factor levels were measured by ELISA; and the expression of GZMB and pathway-related genes and proteins was measured by Western blot. After GZMB silencing, cell proliferation was decreased compared to the control group, and the inflammation factors IL-1b and IL-18, as well as the pyroptosis markers LDH, IL-1b, and IL-18, were all reduced. The GZMB-related proteins GZMB, caspase-3, and Gasdermin E (GSDME) were also decreased. Therefore, GZMB silencing reduces pyroptosis by inhibiting caspase-3 and Gasdermin E decomposition. In summary, GZMB silencing inhibits the activation of caspase-3 and Gasdermin E, thereby delaying inflammation in RA. The GZMB gene may be a potential therapeutic target for RA.
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  • 文章类型: Journal Article
    背景:强直性脊柱炎(AS)是一种慢性炎症性自身免疫性疾病,由于AS的发病机制尚不清楚,其诊断和治疗受到限制。细胞凋亡是一种促炎类型的细胞死亡,在免疫系统中起着重要作用。然而,焦亡基因与AS之间的关系尚未阐明。
    方法:GSE73754、GSE25101和GSE221786数据集从基因表达综合(GEO)数据库收集。通过R软件鉴定差异表达的焦亡相关基因(DE-PRG)。利用机器学习和PPI网络筛选关键基因,构建AS诊断模型。根据DE-PRGs,使用共识聚类分析将AS患者分为不同的焦亡亚型,并使用主成分分析(PCA)进行验证。WGCNA用于筛选两种亚型之间的hub基因模块。基因本体论(GO)术语和京都基因和基因组百科全书(KEGG)途径用于富集分析以阐明潜在机制。ESTIMATE和CIBERSORT算法用于揭示免疫特征。连接图(CMAP)数据库用于预测治疗AS的潜在药物。分子对接用于计算潜在药物与hub基因之间的结合亲和力。
    结果:与健康对照组相比,在AS中检测到16个DE-PRG,其中一些基因与中性粒细胞等免疫细胞有显著的相关性,CD8+T细胞,和静止的NK细胞。富集分析表明,DE-PRGs主要与焦亡有关,IL-1β,和TNF信号通路。关键基因(TNF,采用机器学习筛选的NLRC4、GZMB)和蛋白-蛋白相互作用(PPI)网络建立AS的诊断模型。ROC分析表明,该诊断模型在GSE73754(AUC:0.881)中具有良好的诊断特性,GSE25101(AUC:0.797),和GSE221786(AUC:0.713)。使用16个DE-PRG,AS患者分为C1和C2亚型,这两种亚型在免疫浸润方面表现出显著差异。使用WGCNA从两个亚型中鉴定出关键基因模块,富集分析表明该模块主要与免疫功能有关。三种潜在的药物,包括抗坏血酸,RO90-7501和celastrol,是根据CMAP分析选择的。Cytoscape显示GZMB是得分最高的hub基因。最后,分子对接结果表明,GZMB与抗坏血酸形成了三个氢键,包括ARG-41、LYS-40和HIS-57(亲和力:-5.3kcal/mol)。GZMB和RO-90-7501形成一个氢键,包括CYS-136(亲和力:-8.8kcal/mol)。GZMB和celastrol形成三个氢键,包括TYR-94、HIS-57和LYS-40(亲和力:-9.4kcal/mol)。
    结论:我们的研究系统分析了焦亡与AS之间的关系。焦亡可能在AS的免疫微环境中起重要作用。我们的发现将有助于进一步了解AS的发病机制。
    BACKGROUND: Ankylosing spondylitis (AS) is a chronic inflammatory autoimmune disease, and the diagnosis and treatment of AS have been limited because its pathogenesis is still unclear. Pyroptosis is a proinflammatory type of cell death that plays an important role in the immune system. However, the relationship between pyroptosis genes and AS has never been elucidated.
    METHODS: GSE73754, GSE25101, and GSE221786 datasets were collected from the Gene Expression Omnibus (GEO) database. Differentially expressed pyroptosis-related genes (DE-PRGs) were identified by R software. Machine learning and PPI networks were used to screen key genes to construct a diagnostic model of AS. AS patients were clustered into different pyroptosis subtypes according to DE-PRGs using consensus cluster analysis and validated using principal component analysis (PCA). WGCNA was used for screening hub gene modules between two subtypes. Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were used for enrichment analysis to elucidate underlying mechanisms. The ESTIMATE and CIBERSORT algorithms were used to reveal immune signatures. The connectivity map (CMAP) database was used to predict potential drugs for the treatment of AS. Molecular docking was used to calculate the binding affinity between potential drugs and the hub gene.
    RESULTS: Sixteen DE-PRGs were detected in AS compared to healthy controls, and some of these genes showed a significant correlation with immune cells such as neutrophils, CD8 + T cells, and resting NK cells. Enrichment analysis showed that DE-PRGs were mainly related to pyroptosis, IL-1β, and TNF signaling pathways. The key genes (TNF, NLRC4, and GZMB) screened by machine learning and the protein-protein interaction (PPI) network were used to establish the diagnostic model of AS. ROC analysis showed that the diagnostic model had good diagnostic properties in GSE73754 (AUC: 0.881), GSE25101 (AUC: 0.797), and GSE221786 (AUC: 0.713). Using 16 DE-PRGs, AS patients were divided into C1 and C2 subtypes, and these two subtypes showed significant differences in immune infiltration. A key gene module was identified from the two subtypes using WGCNA, and enrichment analysis suggested that the module was mainly related to immune function. Three potential drugs, including ascorbic acid, RO 90-7501, and celastrol, were selected based on CMAP analysis. Cytoscape showed GZMB as the highest-scoring hub gene. Finally, molecular docking results showed that GZMB and ascorbic acid formed three hydrogen bonds, including ARG-41, LYS-40, and HIS-57 (affinity: -5.3 kcal/mol). GZMB and RO-90-7501 formed one hydrogen bond, including CYS-136 (affinity: -8.8 kcal/mol). GZMB and celastrol formed three hydrogen bonds, including TYR-94, HIS-57, and LYS-40 (affinity: -9.4 kcal/mol).
    CONCLUSIONS: Our research systematically analyzed the relationship between pyroptosis and AS. Pyroptosis may play an essential role in the immune microenvironment of AS. Our findings will contribute to a further understanding of the pathogenesis of AS.
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  • 文章类型: Journal Article
    背景:多发性硬化症(MS)导致中枢神经系统脱髓鞘和神经变性,并伴有自身免疫反应。患者从复发缓解(RR)疗程开始,其中80%以上可能进展为继发性进展型MS(SPMS),这是神经功能逐渐下降的特征,没有证明的治疗方法来预防。本研究旨在探讨外周CD8+T细胞在从RRMS转化为SPMS过程中的贡献,以及在区分SPMS时揭示潜在的诊断特征。
    方法:采用单细胞RNA测序来揭示CD8+T细胞在SPMS和RRMS之间的异质性。此外,流式细胞术用于进一步表征患者CD8+T细胞的动态变化。进行T细胞受体测序以检测MS的克隆扩增。使用Tbx21siRNA,证实T-bet操纵GzmB表达。采用广义线性回归模型和受试者工作特征(ROC)曲线评价GzmB+CD8+T细胞亚群与MS临床特征的相关性及其对SPMS的潜在诊断价值。
    结果:除了原始CD8+T细胞减少,在SPMS患者中观察到活化的CD8+T细胞亚群升高。同时,这种异常扩增的外周CD8+T细胞不仅表现出具有GzmB表达的终末分化效应(EMRA)表型,但也具有与克隆扩张不同的轨迹。此外,T-bet是引起SPMS患者CD8+TEMRA细胞GzmB表达的关键转录因子。最后,CD8+T细胞中GzmB的表达与MS的残疾和进展呈正相关,并能有效区分SPMS和RRMS,具有较高的准确性。
    结论:我们的研究定位了RRMS和SPMS患者的外周免疫细胞,并提供了GzmBCD8TEMRA细胞参与MS进展的证据,它可以用作区分SPMS和RRMS的诊断生物标志物。
    BACKGROUND: Multiple sclerosis (MS) leads to demyelination and neurodegeneration with autoimmune responses in central nervous system. Patients begin with a relapsing-remitting (RR) course, and more than 80% of them may advance to secondary progressive MS (SPMS), which is characteristic for the gradual decline of neurological functions without demonstrated treating method to prevent. This study aims to investigate the contribution of peripheral CD8 + T cells during the conversion from RRMS to SPMS, as well as reveal potential diagnostic signature in distinguishing SPMS.
    METHODS: Single-cell RNA sequencing was employed to reveal the heterogeneity of CD8 + T cells between SPMS and RRMS. In addition, flow cytometry was used to further characterized CD8 + T cell dynamic changes in patients. T cell receptor sequencing was performed to detect the clonal expansion of MS. Using Tbx21 siRNA, T-bet was confirmed to manipulate GzmB expression. The correlation between GzmB + CD8 + T cell subsets and clinical characteristics of MS and their potential diagnostic value for SPMS were evaluated by generalized linear regression models and receiver operating characteristic (ROC) curve respectively.
    RESULTS: Other than diminished naïve CD8 + T cell, elevating of activated CD8 + T cell subsets were observed in SPMS patients. Meanwhile, this aberrant amplified peripheral CD8 + T cells not only exhibited terminal differentiated effector (EMRA) phenotype with GzmB expression, but also possessed distinct trajectory from clonal expansion. In addition, T-bet acted as a key transcriptional factor that elicited GzmB expression in CD8 + TEMRA cells of patients with SPMS. Finally, the expression of GzmB in CD8 + T cells was positively correlated with disability and progression of MS, and could effectively distinguish SPMS from RRMS with a high accuracy.
    CONCLUSIONS: Our study mapped peripheral immune cells of RRMS and SPMS patients and provided an evidence for the involvement of GzmB + CD8 + TEMRA cells in the progression of MS, which could be used as a diagnostic biomarker for distinguishing SPMS from RRMS.
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