Diversity

多样性
  • 文章类型: Journal Article
    评估人类病原体在环境中的风险对于控制疾病传播和维护人类健康至关重要。然而,对高度复杂的环境微生物群落中的低丰度病原体进行全面评估仍然具有挑战性。这项研究汇编了来自全球生物安全机构的247个人类致病性细菌分类群的综合目录,并从其17,470个测序基因组中确定了超过7800万个基因组特异性标记(GSM)。随后,我们分析了这些病原体类型,丰度,以及从不同环境来源获得的474个鸟枪宏基因组序列中的多样性。结果表明,在所研究的四个栖息地中(空气,水,土壤,和沉积物),检测率,多样性,空气中可检测到的病原体的丰度都超过了其他三个栖息地。空气,沉积物,水环境表现出相同的优势类群,这表明这些人类病原体可能具有独特的环境载体来传播或生存。此外,我们观察到人类活动对这些病原体造成的环境风险的影响,大量的人类活动显著增加了人类致病菌的丰度,尤其是在水和空气中。这些发现对人类病原体的环境风险评估具有重要意义。为它们在不同栖息地的存在和分布提供有价值的见解。
    Assessing the risk of human pathogens in the environment is crucial for controlling the spread of diseases and safeguarding human health. However, conducting a thorough assessment of low-abundance pathogens in highly complex environmental microbial communities remains challenging. This study compiled a comprehensive catalog of 247 human-pathogenic bacterial taxa from global biosafety agencies and identified more than 78 million genome-specific markers (GSMs) from their 17,470 sequenced genomes. Subsequently, we analyzed these pathogens\' types, abundance, and diversity within 474 shotgun metagenomic sequences obtained from diverse environmental sources. The results revealed that among the four habitats studied (air, water, soil, and sediment), the detection rate, diversity, and abundance of detectable pathogens in the air all exceeded those in the other three habitats. Air, sediment, and water environments exhibited identical dominant taxa, indicating that these human pathogens may have unique environmental vectors for their transmission or survival. Furthermore, we observed the impact of human activities on the environmental risk posed by these pathogens, where greater amounts of human activities significantly increased the abundance of human pathogenic bacteria, especially in water and air. These findings have remarkable implications for the environmental risk assessment of human pathogens, providing valuable insights into their presence and distribution across different habitats.
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  • 文章类型: Journal Article
    文化反应对于行为分析师的成功至关重要。作为多样性中的主题,股本,在课程和监督中强调包容性,对资源的需求越来越大。迄今为止,关于多样性范围内建议读数的研究有限,股本,以及对行为分析师的包容。我们调查了行为分析师,以构建多样性中的基本读数列表,股本,并纳入并报告了教师分配和学生在行为分析课程中分配的常见出版物。
    Cultural responsiveness is imperative for the success of behavior analysts. As topics within diversity, equity, and inclusion are emphasized within coursework and supervision, there is a growing need for resources. To date, there is limited research on suggested readings within diversity, equity, and inclusion for behavior analysts. We surveyed behavior analysts to construct a list of essential readings within diversity, equity, and inclusion and reported common publications that instructors assigned and students were assigned within behavior analytic coursework.
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  • 文章类型: Journal Article
    累积证据表明,间歇性禁食(IF)对人体代谢健康有益。已经表明其对肠道微生物群的影响可以介导这些有益作用。因此,我们假设IF可能会影响人体肠道微生物群。根据系统评价和荟萃分析(PRISMA)方案的首选报告项目使用PubMed进行系统评价,Scopus,和CINAHL数据库。我们在PROSPERO注册了我们的系统审查方案,注册号为CRD42021270050。直到2023年4月30日发表的人类干预研究被包括在内。使用美国国立卫生研究院(NIH)质量评估研究工具进行干预研究,对纳入研究的质量进行评估。在数据库中搜索返回了166项研究,其中13项符合最终定性分析的所有标准。大量证据表明,IF在瘦(相对健康)和相对健康的超重/肥胖个体中调节人类肠道微生物群α和β多样性,但在代谢综合征个体中却没有。此外,IF还改变所有表型中的人类肠道微生物群组成。感兴趣的,IF干预后的肠道微生物群或微生物代谢产物与代谢标志物相关。根据这次审查,IF影响人类肠道微生物群的多样性和分类水平。个体代谢表型可能改变IF对肠道微生物群多样性和分类水平的影响。
    Cumulative evidence suggests that intermittent fasting (IF) has beneficial effects on human metabolic health. It has been indicated that its impact on the gut microbiota may mediate these beneficial effects. As a result, we hypothesized that IF may impact the human gut microbiota. A systematic review was carried out according to the Preferred Reporting Items for Systematic Reviews and Meta-Analysis (PRISMA) protocol using the PubMed, Scopus, and CINAHL databases. We registered our systematic review protocol in PROSPERO under registration number CRD42021270050. Human intervention studies published until April 30, 2023, were included. The quality of the included studies was assessed using National Institutes of Health (NIH) quality assessment study tools for intervention studies. The search in the database returned 166 studies, of which 13 matched all criteria for the final qualitative analysis. The body of evidence suggests that IF modulates human gut microbiota alpha and beta diversity in lean (relatively healthy) and relatively healthy overweight/obese individuals but not in individuals with metabolic syndrome. Furthermore, IF also alters human gut microbiota composition in all phenotypes. Of interest, the gut microbiota taxa or microbial metabolites after an IF intervention are associated with metabolic markers. According to this review, IF influences the diversity and taxonomic levels of the human gut microbiota. Individual metabolic phenotypes may alter the effect of IF on the diversity and taxonomic levels of the gut microbiota.
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  • 文章类型: Journal Article
    背景:地衣,传统上被认为是一种简单的伙伴关系,主要是在真菌和光生物之间,是,在现实中,由多种微生物组成的复杂的完整生物。地衣真菌群代表地衣内的真菌群落。虽然人们承认寄主地衣种类和环境条件等因素会影响地衣真菌生物群落的结构,现有的研究仍然不足。为了调查哪个因素,宿主属或位置,对地衣真菌群的影响更大,我们对从土耳其和韩国收集的Parmelia和Peltigera中的分枝杆菌进行了比较分析,使用基于内部转录间隔区扩增的高通量测序。
    结果:总体而言,地衣真菌群系以Capnodiales(Dothideomycetes)为主,无论主机或位置。在订单层面,根据地衣属寄主或地理距离,分类组成没有显着差异。前100名丰富的ASV的分层聚类并未清楚地表明地衣真菌群是否受宿主属或位置的影响更大。对群落相似性和分配变量的分析表明,地衣真菌群的结构受位置的影响比受寄主属的影响更大。当按宿主属分析核心真菌生物群落时,Peltigera真菌群比Parmelia真菌群包含更多的ASV成员。这两个核心真菌也有共同的真菌菌株,包括担子菌酵母.此外,我们使用卡方检验来识别宿主属专家和定位专家。
    结论:通过比较不同国家相同属的地衣真菌,我们的研究提高了我们对这些微生物群落的理解。我们的研究阐明了,尽管寄主物种起着重要的作用,地理距离对地衣真菌群的结构产生了更明显的影响。我们为了解占据生态关键生态位的地衣真菌生物群做出了基础性贡献。我们预计,对真菌群落结构的更广泛的全球调查将为地衣内的真菌居民提供更详细的见解。
    BACKGROUND: Lichens, traditionally considered as a simple partnership primarily between mycobiont and photobiont, are, in reality, complex holobionts comprised of a multitude of microorganisms. Lichen mycobiome represents fungal community residing within lichen thalli. While it is acknowledged that factors like the host lichen species and environmental conditions influence the structure of the lichen mycobiome, the existing research remains insufficient. To investigate which factor, host genus or location, has a greater impact on the lichen mycobiome, we conducted a comparative analysis of mycobiomes within Parmelia and Peltigera collected from both Turkey and South Korea, using high-throughput sequencing based on internal transcribed spacer region amplification.
    RESULTS: Overall, the lichen mycobiome was dominated by Capnodiales (Dothideomycetes), regardless of host or location. At the order level, the taxonomic composition was not significantly different according to lichen genus host or geographical distance. Hierarchical clustering of the top 100 abundant ASVs did not clearly indicate whether the lichen mycobiome was more influenced by host genus or location. Analyses of community similarity and partitioning variables revealed that the structure of the lichen mycobiome is more significantly influenced by location than by host genus. When analyzing the core mycobiome by host genus, the Peltigera mycobiome contained more ASV members than the Parmelia mycobiome. These two core mycobiomes also share common fungal strains, including basidiomycete yeast. Additionally, we used chi-squared tests to identify host genus-specialists and location-specialists.
    CONCLUSIONS: By comparing lichen mycobiomes of the same genera across different countries, our study advances our comprehension of these microbial communities. Our study elucidates that, although host species play a contributory role, geographic distance exerts a more pronounced impact on the structure of lichen mycobiome. We have made foundational contributions to understanding the lichen mycobiome occupying ecologically crucial niches. We anticipate that broader global-scale investigations into the fungal community structures will provide more detailed insights into fungal residents within lichens.
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  • 文章类型: Editorial
    越来越多的证据支持医生性别(或性别,许多研究中使用的替代品)对重要的患者结果,如死亡,并发症,和住院时间。最近的研究表明,这些影响是由于团队的性别多样性而不是医生个体的性别。这里,我们反思了医师性别对患者结局影响的潜在机制.
    Accumulating evidence supports an effect of physician gender (or sex, a surrogate used in many studies) on important patient outcomes such as death, complications, and hospital length of stay. Recent studies suggest that these effects result from the gender diversity of the team rather than individual physician gender. Here, we reflect on the potential mechanisms of an effect of physician gender on patient outcomes.
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  • 文章类型: Journal Article
    目前对恶性疟原虫环子孢子(PfCSP)的遗传多态性和自然选择的理解,领先的疟疾疫苗,对下一代疫苗的开发至关重要,非洲缺乏这样的数据。在四个喀麦隆地区(杜阿拉,Maroua,Mayo-Oulo,Pette).使用巢式PCR方案扩增DNA样本,测序,和爆炸。在每个PfCSP区域分析单核苷酸多态性(SNP),并在计算机上预测了它们对PfCSP功能/结构的影响。N端区域显示出有限的多态性,具有四个单倍型,和三个新的SNP(N68Y,R87W,K93E)被发现。在中部地区鉴定出35个单倍型,具有几个变体(例如,NVNP和KANP)。C端区域也高度多样化,具有25个单倍型和8个新的SNP(N290D,N308I,S312G,K317A,V344I,D356E,E357L,D359Y)。大多数多态性密码子位点主要在Douala和Pette的分离株的Th2R子区域中观察到。密码子位点321处于偶发性正选择下。一部小说(E357L)和三部已知的(K322I,G349D,D359Y)SNP显示对功能/结构的影响。这项研究显示了广泛的遗传多样性,具有地理格局和喀麦隆PfCSP中部和C末端区域选择的证据。
    Current understanding of genetic polymorphisms and natural selection in Plasmodium falciparum circumsporozoite (PfCSP), the leading malaria vaccine, is crucial for the development of next-generation vaccines, and such data is lacking in Africa. Blood samples were collected among Plasmodium-infected individuals living in four Cameroonian areas (Douala, Maroua, Mayo-Oulo, Pette). DNA samples were amplified using nested PCR protocols, sequenced, and BLASTed. Single nucleotide polymorphisms (SNPs) were analysed in each PfCSP region, and their impact on PfCSP function/structure was predicted in silico. The N-terminal region showed a limited polymorphism with four haplotypes, and three novel SNPs (N68Y, R87W, K93E) were found. Thirty-five haplotypes were identified in the central region, with several variants (e.g., NVNP and KANP). The C-terminal region was also highly diverse, with 25 haplotypes and eight novel SNPs (N290D, N308I, S312G, K317A, V344I, D356E, E357L, D359Y). Most polymorphic codon sites were mainly observed in the Th2R subregion in isolates from Douala and Pette. The codon site 321 was under episodic positive selection. One novel (E357L) and three known (K322I, G349D, D359Y) SNPs show an impact on function/structure. This study showed extensive genetic diversity with geographical patterns and evidence of the selection of Cameroonian PfCSP central and C-terminal regions.
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  • 文章类型: Journal Article
    专业主义是一种抽象的多维社会文化结构,本质上是进化的和依赖于上下文的。这使得医疗保健专业的教学和评估变得复杂而具有挑战性。缺乏专业精神会增加患者的风险和诉讼。
    本文探讨了跨医疗保健和非医疗保健学科的群体创造力和多样性,以及他们如何帮助学生构建自己的专业理解和知识。建议将专业精神与创造力联系起来,将提高对如何帮助学习医疗保健的学生更好地学习专业精神的理解。
    共有30名来自不同高等教育水平和跨学科的学生参加了这项研究。他们探索了画廊或博物馆,并检查了与专业精神有关的人工制品。通过调查结果以及对反思性论文和半结构化访谈的主题分析来评估学习经验。
    参与者报告说,他们对专业的理解和对他人观点和技能的欣赏。这项任务的创造性方面既有趣又引人入胜,和群体多样性使不同的意见和观点能够被听到和分享。这类似于专业的工作环境。论文产生的主题是:(A)内在动机,(b)多样性,(c)学习专业精神,(d)遇到的挑战。
    这项研究的结果为现有文献做出了有意义的贡献,通过实证证明,当来自不同学科的学生在真正的创造性和多样化的环境中进行学习活动时,他们可以更好地构建自己对专业的理解。这种教育概念是由不相互排斥的各种类型的创造力支撑的。希望这第一个证据将激发更多关于在医疗保健教育中利用群体创造力和多样性的研究。
    UNASSIGNED: Professionalism is a multidimensional sociocultural construct that is abstract, evolving and context-dependent in nature. This has made the teaching and assessment of professionalism in healthcare complex and challenging. A lack of professionalism can increase patient risk and litigation.
    UNASSIGNED: This article examines group creativity and diversity across healthcare and non-healthcare disciplines and how they can assist students in constructing their own understandings and knowledge of professionalism. It is proposed that linking professionalism to creativity will improve understanding on how to help students studying healthcare learn about professionalism better.
    UNASSIGNED: A total of 30 students from different tertiary levels and across disciplines participated in the study. They explored either a gallery or museum and examined an artefact relating to professionalism. Learning experiences were evaluated via survey results and thematic analyses of their reflective essays and semi-structured interviews.
    UNASSIGNED: Participants reported increased understanding of professionalism and appreciation of perspectives and skills of others. The creative aspect of the task was fun and engaging, and group diversity enabled different opinions and perspectives to be heard and shared. This is analogous to a professional working environment. Themes generated from the essays were: (a) intrinsic motivation, (b) diversity, (c) learnings of professionalism, and (d) challenge encountered.
    UNASSIGNED: The results of this research make a meaningful contribution to existing literature by empirically demonstrating that students from different disciplines could better construct their own understandings of professionalism when their learning activities were performed in an authentically creative and diverse setting. This educational concept is underpinned by diverse types of creativities that are not mutually exclusive. It is hoped that this first piece of evidence will stimulate more studies on utilising group creativity and diversity in healthcare education.
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  • 文章类型: Journal Article
    背景:大西洋鳕鱼是大西洋中的一种多产物种,尽管其特异性抗体反应不一致。由于其独特的免疫系统,它在脊椎动物免疫学中表现出一种特殊的情况,以缺乏MHCII抗原呈递途径为特征,T细胞依赖性抗体应答所需。对免疫球蛋白基因座的彻底表征和抗体库的分析对于我们在分子水平上进一步了解大西洋鳕鱼的免疫反应是必要的。
    结果:对鳕鱼基因组(gadmor3.0)的全面搜索确定了在2号染色体上组织成三个连续转环的完整IgH基因,而IgL基因位于2号和5号染色体上。大西洋鳕鱼表现出中等的种系V基因多样性,包含IgH和IgL的四个V基因家族,每个都有不同的染色体位置和组织结构。5'RACE测序揭示了不同范围的重链CDR3序列和轻链中相对有限的CDR3多样性。分析强调了V基因种系CDR3长度对重链和轻链之间受体CDR3长度的差异影响,强调不同的重组过程。
    结论:这项研究表明,大西洋鳕鱼,尽管它的抗体反应不一致,保持与其他鱼类相当的免疫球蛋白多样性水平。研究结果表明,最近κ轻链基因的大量重复并不会导致谱系多样性的增加。这项研究提供了大西洋鳕鱼的免疫球蛋白基因组织和库的全面观点,对于未来在分子水平上研究抗体反应是必要的。
    BACKGROUND: The Atlantic cod is a prolific species in the Atlantic, despite its inconsistent specific antibody response. It presents a peculiar case within vertebrate immunology due to its distinct immune system, characterized by the absence of MHCII antigen presentation pathway, required for T cell-dependent antibody responses. Thorough characterisation of immunoglobulin loci and analysis of the antibody repertoire is necessary to further our understanding of the Atlantic cod\'s immune response on a molecular level.
    RESULTS: A comprehensive search of the cod genome (gadmor3.0) identified the complete set of IgH genes organized into three sequential translocons on chromosome 2, while IgL genes were located on chromosomes 2 and 5. The Atlantic cod displayed a moderate germline V gene diversity, comprising four V gene families for both IgH and IgL, each with distinct chromosomal locations and organizational structures. 5\'RACE sequencing revealed a diverse range of heavy chain CDR3 sequences and relatively limited CDR3 diversity in light chains. The analysis highlighted a differential impact of V-gene germline CDR3 length on receptor CDR3 length between heavy and light chains, underlining different recombination processes.
    CONCLUSIONS: This study reveals that the Atlantic cod, despite its inconsistent antibody response, maintains a level of immunoglobulin diversity comparable to other fish species. The findings suggest that the extensive recent duplications of kappa light chain genes do not result in increased repertoire diversity. This research provides a comprehensive view of the Atlantic cod\'s immunoglobulin gene organization and repertoire, necessary for future studies of antibody responses at the molecular level.
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  • 文章类型: Journal Article
    背景:肠道菌群显著影响红斑石斑鱼(Epinephelusakaara)的健康和生长,一种来自中国南方福建省的著名商业海鱼。然而,生存策略和季节的变化会影响肠道微生物群数据的稳定性,使其在反映肠道微生物群的状态时不准确。通过对肠道微生物群的细致理解,这阻碍了水产养殖健康的有效增强。受此启发,我们在四个季节对野生和圈养的E.akaara的肠道微生物群进行了全面分析。
    结果:从东山市的野生和圈养种群中收集了72个E.akaara样本,在四个不同的季节。收集肠道的四个部分以获得有关肠道微生物组成的全面信息,并使用16SrRNA下一代IlluminaMiSeq进行测序。在冬季,我们观察到圈养和野生E.akaara的肠道微生物多样性最高。并使用Mantel分析确定了与水温的强相关性。与野生E.akaara相比,我们在圈养的E.akaara中发现了一个更复杂的微生物网络,芽孢杆菌科的丰度增加证明了这一点,斑马鱼科和肠杆菌科。相比之下,弧菌科,梭菌科,发现黄杆菌科和红杆菌科在野生E.akaara中更有活性。然而,一些核心微生物,如Firmicutes和光细菌,在野生组和圈养组中都显示出相似的分布模式。此外,我们发现了阿卡拉从前肠到后肠的前10个核心微生物的常见群落组成和分布特征。
    结论:总的来说,该研究提供了对E.akaara肠道微生物群的相对更全面的描述,考虑到生存策略和时间维度,这对E.akaara的肠道微生物群产生了有价值的见解,并为其水产养殖提供了有价值的参考。
    BACKGROUND: The gut microbiota significantly influences the health and growth of red-spotted grouper (Epinephelus akaara), a well-known commercial marine fish from Fujian Province in southern China. However, variations in survival strategies and seasons can impact the stability of gut microbiota data, rendering it inaccurate in reflecting the state of gut microbiota. Which impedes the effective enhancement of aquaculture health through a nuanced understanding of gut microbiota. Inspired by this, we conducted a comprehensive analysis of the gut microbiota of wild and captive E. akaara in four seasons.
    RESULTS: Seventy-two E. akaara samples were collected from wild and captive populations in Dongshan city, during four different seasons. Four sections of the gut were collected to obtain comprehensive information on the gut microbial composition and sequenced using 16S rRNA next-generation Illumina MiSeq. We observed the highest gut microbial diversity in both captive and wild E. akaara during the winter season, and identified strong correlations with water temperature using Mantel analysis. Compared to wild E. akaara, we found a more complex microbial network in captive E. akaara, as evidenced by increased abundance of Bacillaceae, Moraxellaceae and Enterobacteriaceae. In contrast, Vibrionaceae, Clostridiaceae, Flavobacteriaceae and Rhodobacteraceae were found to be more active in wild E. akaara. However, some core microorganisms, such as Firmicutes and Photobacterium, showed similar distribution patterns in both wild and captive groups. Moreover, we found the common community composition and distribution characteristics of top 10 core microbes from foregut to hindgut in E. akaara.
    CONCLUSIONS: Collectively, the study provides relatively more comprehensive description of the gut microbiota in E. akaara, taking into account survival strategies and temporal dimensions, which yields valuable insights into the gut microbiota of E. akaara and provides a valuable reference to its aquaculture.
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  • 文章类型: Journal Article
    目的:与多样性相关的能力对于培训和评估学生药剂师准备提供公平和包容性护理至关重要。药学教育缺乏这种能力;因此,这项研究旨在探讨多样性能力的发展和支持因素,为学生做好准备,以满足能力并在多样化中提供患者护理,公平和包容的方式。
    方法:药房多样性思想领导者被邀请参加三轮改良德尔菲调查。调查项目是使用后向设计创建的。使用常数比较法分析定性数据。能力声明草案是根据第一轮的集体评论以及与实现能力所需的支持因素有关的主题制定的。就主题达成共识,能力陈述和编辑在第二轮中确定。在第3轮中收集了有关编辑的其他评论和反馈。共识预设为85.7%。
    结果:创建了七个能力陈述。知识,技能,态度,行为,值,确定了课程内容/教学法和为学生做好准备以满足能力和支持教师所需的资源。
    结论:初步的多样性能力和所需的支持因素是使用思想领袖的观点来开发的。进一步评估,包括培养适合学生的能力,内容和评估工具的测试和验证,并确定在药学课程中的位置,是在能力发展过程中应该考虑的未来步骤。
    OBJECTIVE: Competencies related to diversity could be essential to training and assessing student pharmacists in their readiness to provide equitable and inclusive care. Such competencies are lacking in pharmacy education; therefore, this study aimed to explore the development of diversity competencies and supporting factors needed to prepare students to meet the competencies and provide patient care in a diverse, equitable and inclusive manner.
    METHODS: Pharmacy diversity thought leaders were invited to participate in a three-round modified Delphi survey. Survey items were created using a Backward Design. Qualitative data were analyzed using the Constant Comparative Method. Draft competency statements were created based on the collective comments from Round 1 along with themes related to the supporting factors needed to achieve the competencies. Consensus on themes, competency statements and edits were identified in Round 2. Additional comments and feedback on edits were gathered in Round 3. Consensus was preset at 85.7%.
    RESULTS: Seven competency statements were created. Knowledge, skills, attitudes, behaviors, values, curricular content/pedagogy and resources needed to prepare students to meet the competencies and support faculty would need were identified.
    CONCLUSIONS: Preliminary diversity competencies and supporting factors needed were developed using the perspective of thought leaders. Further evaluation, including development of student-appropriate competencies, testing and validation of content and assessment tools, and determining place in the pharmacy curriculum, are future steps that should be considered in the competency development process.
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