Cnidaria

CNidaria
  • 文章类型: Journal Article
    含有许多微生物的动态粘液层覆盖珊瑚表面,具有多种功能,包括去除沉积物和收集食物。\“1它也可能是感染的主要屏障;在珊瑚粘液中已鉴定出具有抗菌活性的各种蛋白质和化合物,尽管这些被认为主要或完全是微生物来源。就像在九头蛇一样,2抗微生物肽(AMP)可能在调节珊瑚的微生物群落中起主要作用。3,4一些真核生物采用互补但不太明显的方法通过干扰群体信号来操纵其相关微生物组,有效防止细菌协调整个群体的基因表达。我们对造礁珊瑚Acroporamillepora的免疫力进行了调查,5然而,导致发现了一种珊瑚基因,在这里称为AmNtNH1,该基因可以使一系列酰基高丝氨酸内酯(AHLs)失活,常见的细菌群体信号分子,并在成年珊瑚的免疫攻击下诱导,并在幼虫沉降过程中表达。紧密相关的蛋白质广泛分布在Screractinia(硬珊瑚)和其他一些刺胞动物中,在Acropora有多个旁系物,但它们的近亲是细菌,暗示这些是一个或多个侧向基因转移事件的产物。珊瑚部署细菌用于与其他细菌竞争的基因反映了先前在后生动物中未知的微生物组操纵机制,但可能更普遍地适用。
    A dynamic mucous layer containing numerous micro-organisms covers the surface of corals and has multiple functions including both removal of sediment and \"food gathering.\"1 It is likely to also act as the primary barrier to infection; various proteins and compounds with antimicrobial activity have been identified in coral mucus, though these are thought to be largely or exclusively of microbial origin. As in Hydra,2 anti-microbial peptides (AMPs) are likely to play major roles in regulating the microbiomes of corals.3,4 Some eukaryotes employ a complementary but less obvious approach to manipulate their associated microbiome by interfering with quorum signaling, effectively preventing bacteria from coordinating gene expression across a population. Our investigation of immunity in the reef-building coral Acropora millepora,5 however, led to the discovery of a coral gene referred to here as AmNtNH1 that can inactivate a range of acyl homoserine lactones (AHLs), common bacterial quorum signaling molecules, and is induced on immune challenge of adult corals and expressed during the larval settlement process. Closely related proteins are widely distributed within the Scleractinia (hard corals) and some other cnidarians, with multiple paralogs in Acropora, but their closest relatives are bacterial, implying that these are products of one or more lateral gene transfer events post-dating the cnidarian-bilaterian divergence. The deployment by corals of genes used by bacteria to compete with other bacteria reflects a mechanism of microbiome manipulation previously unknown in Metazoa but that may apply more generally.
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  • 文章类型: Journal Article
    神经元的复杂形态需要精确控制其微管细胞骨架。这是通过调节微管组装和稳定性的微管相关蛋白(MAP)来实现的。以及沿着它们运输分子和囊泡。虽然许多这些MAP在所有细胞中起作用,有些特别或主要参与调节神经元的微管。在这里,我们使用海葵Nematostellavectensis作为模型生物,为神经微管调节的早期进化提供新的见解。作为一个cnidarian,Nematostella属于所有双边体的外群,因此占据了重建神经系统发育进化的信息系统发育位置。我们确定了微管结合蛋白doublecortin样激酶(NvDclk1)的直系同源基因,该基因主要在神经元和CNidcells(刺痛细胞)中表达,刺胞动物中属于神经谱系的两类细胞。转基因NvDclk1报告品系揭示了从触手和身体柱中的CNid细胞中出现的神经突样过程的复杂网络。在NvDclk1启动子控制下表达NvDclk1的转基因表明NvDclk1定位于微管,因此可能充当微管结合蛋白。Further,我们使用CRISPR/Cas9产生了NvDclk1的突变体,并显示突变体无法产生成熟的CNidcytes。我们的结果支持以下假设:微管调节程序的制定发生在神经系统进化的早期。
    The complex morphology of neurons requires precise control of their microtubule cytoskeleton. This is achieved by microtubule-associated proteins (MAPs) that regulate the assembly and stability of microtubules, and transport of molecules and vesicles along them. While many of these MAPs function in all cells, some are specifically or predominantly involved in regulating microtubules in neurons. Here we use the sea anemone Nematostella vectensis as a model organism to provide new insights into the early evolution of neural microtubule regulation. As a cnidarian, Nematostella belongs to an outgroup to all bilaterians and thus occupies an informative phylogenetic position for reconstructing the evolution of nervous system development. We identified an ortholog of the microtubule-binding protein doublecortin-like kinase (NvDclk1) as a gene that is predominantly expressed in neurons and cnidocytes (stinging cells), two classes of cells belonging to the neural lineage in cnidarians. A transgenic NvDclk1 reporter line revealed an elaborate network of neurite-like processes emerging from cnidocytes in the tentacles and the body column. A transgene expressing NvDclk1 under the control of the NvDclk1 promoter suggests that NvDclk1 localizes to microtubules and therefore likely functions as a microtubule-binding protein. Further, we generated a mutant for NvDclk1 using CRISPR/Cas9 and show that the mutants fail to generate mature cnidocytes. Our results support the hypothesis that the elaboration of programs for microtubule regulation occurred early in the evolution of nervous systems.
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  • 文章类型: Journal Article
    双侧动物的神经系统通常由两种细胞类型组成:神经元和神经胶质细胞。尽管积累了有关神经胶质细胞在双边神经系统中具有许多重要功能的数据,这种丰富的细胞类型的进化起源仍不清楚。当前有关神经胶质进化的假设主要基于模型双边的数据。在神经胶质研究中,非双边动物在很大程度上被忽视了,并且仅进行了形态学分析。这里,我们提供了非双侧叶中双侧胶质细胞遗传库的保护的全面概述(Cnidaria,胎盘动物,黄蜂,和Porifera)。我们概述了双边胶质细胞类型的分子和功能特征,并讨论了它们可能的进化史。然后,我们检查非双边神经胶质中存在哪些神经胶质特征。其中,cnidarians显示出最高程度的胶质细胞生成程序保守性,因此可能对回答有关胶质细胞进化的问题至关重要。
    Nervous systems of bilaterian animals generally consist of two cell types: neurons and glial cells. Despite accumulating data about the many important functions glial cells serve in bilaterian nervous systems, the evolutionary origin of this abundant cell type remains unclear. Current hypotheses regarding glial evolution are mostly based on data from model bilaterians. Non-bilaterian animals have been largely overlooked in glial studies and have been subjected only to morphological analysis. Here, we provide a comprehensive overview of conservation of the bilateral gliogenic genetic repertoire of non-bilaterian phyla (Cnidaria, Placozoa, Ctenophora, and Porifera). We overview molecular and functional features of bilaterian glial cell types and discuss their possible evolutionary history. We then examine which glial features are present in non-bilaterians. Of these, cnidarians show the highest degree of gliogenic program conservation and may therefore be crucial to answer questions about glial evolution.
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  • 文章类型: Journal Article
    我们确定了一种新的人类电压门控钾通道阻滞剂,NnK-1,在水母Nemopilemanomurai基于其基因组信息。编码NnK-1的基因序列含有5408个碱基对,有五个内含子和六个外显子.NnK-1前体的编码序列为894个核苷酸长,编码297个氨基酸,含有5种假定的ShK样肽。电生理试验表明,第五肽,NnK-1是化学合成的,是hKv1.3、hKv1.4和hKv1.5的有效阻断剂。与CNidarianShk样肽的多序列比对,具有Kv1.3阻断活性,揭示了三个残基(3Asp,25Lys,和34Thr)的NnK-1,以及六个半胱氨酸残基,是保守的。因此,我们假设这三个残基对于毒素与电压门控钾通道的结合至关重要。通过使用合成肽(NnK-1μ)的电生理学测定证实了这一概念,其中这三种肽被3Glu取代,25Arg,第34章总之,我们在水母中成功鉴定并鉴定了一种新的电压门控钾通道阻断剂,该阻断剂与三种不同的电压门控钾通道相互作用。与多个电压门控钾通道相互作用的肽在各种生理和病理生理学背景下具有许多治疗应用。
    We identified a new human voltage-gated potassium channel blocker, NnK-1, in the jellyfish Nemopilema nomurai based on its genomic information. The gene sequence encoding NnK-1 contains 5408 base pairs, with five introns and six exons. The coding sequence of the NnK-1 precursor is 894 nucleotides long and encodes 297 amino acids containing five presumptive ShK-like peptides. An electrophysiological assay demonstrated that the fifth peptide, NnK-1, which was chemically synthesized, is an effective blocker of hKv1.3, hKv1.4, and hKv1.5. Multiple-sequence alignment with cnidarian Shk-like peptides, which have Kv1.3-blocking activity, revealed that three residues (3Asp, 25Lys, and 34Thr) of NnK-1, together with six cysteine residues, were conserved. Therefore, we hypothesized that these three residues are crucial for the binding of the toxin to voltage-gated potassium channels. This notion was confirmed by an electrophysiological assay with a synthetic peptide (NnK-1 mu) where these three peptides were substituted with 3Glu, 25Arg, and 34Met. In conclusion, we successfully identified and characterized a new voltage-gated potassium channel blocker in jellyfish that interacts with three different voltage-gated potassium channels. A peptide that interacts with multiple voltage-gated potassium channels has many therapeutic applications in various physiological and pathophysiological contexts.
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  • 文章类型: Journal Article
    昼夜节律时钟能够预测从刺胞动物到哺乳动物的动物的日/夜周期。昼夜节律是通过转录-翻译反馈回路(TTFL或起搏器)产生的,CLOCK是动物中保守的积极因素。然而,CLOCK在基础动物中的功能进化起源和作用机制尚不清楚。在cnidarianNematostellavectensis中,起搏器基因转录水平,包括NvClk(时钟直向序列),在持续的黑暗中出现心律失常,质疑NvCLK的作用。利用CRISPR/Cas9,我们产生了NvClk等位基因突变体(NvClkΔ),揭示恒定黑暗(DD)或光(LL)下的昼夜节律行为损失,同时在明暗条件(LD)下保持24小时的节律。转录组学分析显示,与DD条件相比,野生型(WT)息肉在LD中具有不同的节律基因。在LD,NvClkΔ/Δ息肉表现出相当数量的节律基因,但在DD中减少。此外,在LD下,NvClkΔ/Δ息肉表现出颞起搏器基因表达的改变,影响他们潜在的互动。此外,观察到与细胞分裂和神经元分化相关的非节律基因的差异表达。这些发现表明,光响应通路可以部分补偿昼夜节律的中断,时钟基因在刺胞动物中进化,使有节奏的生理和行为与地球生物圈的diel节奏同步。
    The circadian clock enables anticipation of the day/night cycle in animals ranging from cnidarians to mammals. Circadian rhythms are generated through a transcription-translation feedback loop (TTFL or pacemaker) with CLOCK as a conserved positive factor in animals. However, CLOCK\'s functional evolutionary origin and mechanism of action in basal animals are unknown. In the cnidarian Nematostella vectensis, pacemaker gene transcript levels, including NvClk (the Clock ortholog), appear arrhythmic under constant darkness, questioning the role of NvCLK. Utilizing CRISPR/Cas9, we generated a NvClk allele mutant (NvClkΔ), revealing circadian behavior loss under constant dark (DD) or light (LL), while maintaining a 24 hr rhythm under light-dark condition (LD). Transcriptomics analysis revealed distinct rhythmic genes in wild-type (WT) polypsunder LD compared to DD conditions. In LD, NvClkΔ/Δ polyps exhibited comparable numbers of rhythmic genes, but were reduced in DD. Furthermore, under LD, the NvClkΔ/Δ polyps showed alterations in temporal pacemaker gene expression, impacting their potential interactions. Additionally, differential expression of non-rhythmic genes associated with cell division and neuronal differentiation was observed. These findings revealed that a light-responsive pathway can partially compensate for circadian clock disruption, and that the Clock gene has evolved in cnidarians to synchronize rhythmic physiology and behavior with the diel rhythm of the earth\'s biosphere.
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  • 文章类型: Journal Article
    生物发光,生物体发出的光,是一种具有多种生态功能的迷人而广泛的现象。这篇全面的综述探讨了生物多样性,机制,生态角色,以及巴西生物发光生物的保护挑战,一个以广阔多样的生态系统而闻名的国家。从萤火虫和黑暗中的蘑菇的迷人光芒到海洋鞭毛虫和刺鼻虫的迷人展示,巴西展示了一系列非凡的生物发光物种。了解生物发光中涉及的生化机制和酶可以增强我们对其进化适应和生态功能的了解。然而,栖息地丧失,气候变化,和光污染对这些生物发光生物构成重大威胁。保护措施,跨学科合作,负责任的照明实践对他们的生存至关重要。未来的研究应该集中在确定特有物种上,研究影响生物发光的环境因素,并制定有效的保护策略。通过跨学科合作,先进技术,增加资金,巴西可以解开其生物发光生物多样性的奥秘,推动科学进步,并确保这些迷人生物的长期保存。
    Bioluminescence, the emission of light by living organisms, is a captivating and widespread phenomenon with diverse ecological functions. This comprehensive review explores the biodiversity, mechanisms, ecological roles, and conservation challenges of bioluminescent organisms in Brazil, a country known for its vast and diverse ecosystems. From the enchanting glow of fireflies and glow-in-the-dark mushrooms to the mesmerizing displays of marine dinoflagellates and cnidarians, Brazil showcases a remarkable array of bioluminescent species. Understanding the biochemical mechanisms and enzymes involved in bioluminescence enhances our knowledge of their evolutionary adaptations and ecological functions. However, habitat loss, climate change, and photopollution pose significant threats to these bioluminescent organisms. Conservation measures, interdisciplinary collaborations, and responsible lighting practices are crucial for their survival. Future research should focus on identifying endemic species, studying environmental factors influencing bioluminescence, and developing effective conservation strategies. Through interdisciplinary collaborations, advanced technologies, and increased funding, Brazil can unravel the mysteries of its bioluminescent biodiversity, drive scientific advancements, and ensure the long-term preservation of these captivating organisms.
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  • 文章类型: Journal Article
    对星状海葵的研究为动物昼夜节律时钟的早期进化提供了重要见解。
    Studies of the starlet sea anemone provide important insights into the early evolution of the circadian clock in animals.
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  • 文章类型: Journal Article
    基因复制是推动进化创新的主要力量。一个典型的例子是通过复制生理蛋白质编码基因并募集到毒液中来产生新的动物毒素。虽然这个过程推动了许多动物毒液的创新,毒素向无毒细胞的反向募集仍未解决。使用比较基因组学,我们发现膜攻击复合体和穿孔素家族(MAC)的成员已被招募到注射毒液的细胞(CNidcytes)中,在柔软多石的珊瑚和海葵中,表明祖先MAC是一种表达毒素的细胞。进一步研究海葵Nematostellavectensis模型,揭示了三名成员经历了Nematostella特异性复制,导致他们反向募集到内中胚层细胞。此外,同时敲除所有三种内胚层表达的MAC导致发育错误,支持这些旁系同源物具有无毒功能。通过解析线虫MACs的进化历史和功能,我们为从毒液到有机体发展的反向招募提供了第一个证据。
    Gene duplication is a major force driving evolutionary innovation. A classic example is generating new animal toxins via duplication of physiological protein-encoding genes and recruitment into venom. While this process drives the innovation of many animal venoms, reverse recruitment of toxins into nonvenomous cells remains unresolved. Using comparative genomics, we find members of the Membrane Attack Complex and Perforin Family (MAC) have been recruited into venom-injecting cells (cnidocytes), in soft and stony corals and sea anemones, suggesting that the ancestral MAC was a cnidocyte expressed toxin. Further investigation into the model sea anemone Nematostella vectensis reveals that three members have undergone Nematostella-specific duplications leading to their reverse recruitment into endomesodermal cells. Furthermore, simultaneous knockdown of all three endomesodermally expressed MACs leads to mis-development, supporting that these paralogs have nonvenomous function. By resolving the evolutionary history and function of MACs in Nematostella, we provide the first proof for reverse recruitment from venom to organismal development.
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  • 文章类型: Journal Article
    神经肽和肽激素的实验发现是一项漫长而繁琐的任务。使用强大的分泌肽预测工具挖掘基因组和转录组序列数据可以显着促进后续实验。我们描述了各种计算机神经肽发现方法在胎盘虫Trichopaxadhaerens中的应用,作为一个示例和强大的细胞和进化生物学实验范式。总的来说,使用基于同源性的BLAST搜索以及基于重复序列和比较进化方法,发现了33个胎盘(神经)肽样激素前体。一些发现的前体与来自Cnidaria和其他动物门的胰岛素和RFamide前体同源。
    Experimental discovery of neuropeptides and peptide hormones is a long and tedious task. Mining the genomic and transcriptomic sequence data with robust secretory peptide prediction tools can significantly facilitate subsequent experiments. We describe the application of various in silico neuropeptide discovery methods for the placozoan Trichopax adhaerens as an illustrated example and a powerful experimental paradigm for cellular and evolutionary biology. In total, 33 placozoan (neuro)peptide-like hormone precursors were found using homology-based BLAST search and repeat-based and comparative evolutionary methods. Some of the discovered precursors are homologous to insulins and RFamide precursors from Cnidaria and other animal phyla.
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  • 文章类型: Journal Article
    高血压,与心脏病和过早死亡有关的主要健康问题,由于现有药物的副作用,促使人们寻找替代疗法。低营养海洋生物的可持续收获不仅增强了粮食安全,而且还提供了多种生物活性分子,包括肽。尽管只包含一小部分活性天然化合物,由于其大小,肽是药物开发的理想选择,稳定性,和抗降解。我们的评论评估了来自选定的海洋无脊椎动物门的肽和蛋白质的抗高血压特性,检查所使用的各种方法及其在制药中的应用,补充剂,和功能性食品。关于某些海洋无脊椎动物的抗高血压作用的研究相当多,然而,许多物种仍未被检查。一系列的评估方法,特别是ACE抑制,使结果的比较复杂化。体外和动物体内研究的优势表明需要更多的临床研究以将肽转化为药物。我们的发现为进一步探索这些有前途的海洋无脊椎动物奠定了基础,强调需要平衡科学发现和海洋保护以实现可持续资源利用。
    Hypertension, a major health concern linked to heart disease and premature mortality, has prompted a search for alternative treatments due to side effects of existing medications. Sustainable harvesting of low-trophic marine organisms not only enhances food security but also provides a variety of bioactive molecules, including peptides. Despite comprising only a fraction of active natural compounds, peptides are ideal for drug development due to their size, stability, and resistance to degradation. Our review evaluates the anti-hypertensive properties of peptides and proteins derived from selected marine invertebrate phyla, examining the various methodologies used and their application in pharmaceuticals, supplements, and functional food. A considerable body of research exists on the anti-hypertensive effects of certain marine invertebrates, yet many species remain unexamined. The array of assessments methods, particularly for ACE inhibition, complicates the comparison of results. The dominance of in vitro and animal in vivo studies indicates a need for more clinical research in order to transition peptides into pharmaceuticals. Our findings lay the groundwork for further exploration of these promising marine invertebrates, emphasizing the need to balance scientific discovery and marine conservation for sustainable resource use.
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