Caenorhabditis elegans

秀丽隐杆线虫
  • 文章类型: Journal Article
    Precise developmental timing control is essential for organism formation and function, but its mechanisms are unclear. In C. elegans, the microRNA lin-4 critically regulates developmental timing by post-transcriptionally downregulating the larval-stage-fate controller LIN-14. However, the mechanisms triggering the activation of lin-4 expression toward the end of the first larval stage remain unknown. We demonstrate that the transmembrane transcription factor MYRF-1 is necessary for lin-4 activation. MYRF-1 is initially localized on the cell membrane, and its increased cleavage and nuclear accumulation coincide with lin-4 expression timing. MYRF-1 regulates lin-4 expression cell-autonomously and hyperactive MYRF-1 can prematurely drive lin-4 expression in embryos and young first-stage larvae. The tandem lin-4 promoter DNA recruits MYRF-1GFP to form visible loci in the nucleus, suggesting that MYRF-1 directly binds to the lin-4 promoter. Our findings identify a crucial link in understanding developmental timing regulation and establish MYRF-1 as a key regulator of lin-4 expression.
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  • 文章类型: Journal Article
    Sexual dimorphism affects various biological functions, including immune responses. However, the mechanisms by which sex alters immunity remain largely unknown. Using Caenorhabditis elegans as a model species, we showed that males exhibit enhanced immunity against various pathogenic bacteria through the upregulation of HLH-30 (Helix Loop Helix 30/TFEB (transcription factor EB), a transcription factor crucial for macroautophagy/autophagy. Compared with hermaphroditic C. elegans, males displayed increased activity of HLH-30/TFEB, which contributed to enhanced antibacterial immunity. atg-2 (AuTophaGy (yeast Atg homolog) 2) upregulated by HLH-30/TFEB mediated increased immunity in male C. elegans. Thus, the males appear to be equipped with enhanced HLH-30/TFEB-mediated autophagy, which increases pathogen resistance, and this may functionally prolong mate-searching ability with reduced risk of infection.
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  • 文章类型: Journal Article
    BACKGROUND: Early diagnosis of cancer is essential for its effective treatment. Currently, established screening tests are cancer-specific and require screening for each type of cancer separately. The primary objective of cancer research is to develop methods that can detect multiple types of tumors from a single body fluid sample. Multicancer early detection tests aim to detect fragments of circulating tumor DNA, cell-free DNA, circulating microRNAs, or proteins released by cancer cells in the patient\'s body fluids. However, these tests are not suitable for routine cancer prevention due to their high cost. Therefore, in recent years, cancer screening tests have been developed to detect volatile organic compounds in urine using living organisms, such as nematodes, Caenorhabditis elegans. Measuring only 1 mm in length, C. elegans has the potential to offer a new, efficient, cost-effective, quick, and painless method to detect the presence of tumor.
    OBJECTIVE: The purpose of this review is to present an overview of the literature on the development and validation of C. elegans-based cancer detection methods. The potential benefits of these assays are significant, as they could become a valuable tool for the early identification and diagnosis of cancer, even though this research is still in its initial stages of development.
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  • 文章类型: Journal Article
    In many animal species, the oocyte meiotic spindle, which is required for chromosome segregation, forms without centrosomes. In some systems, Ran-GEF on chromatin initiates spindle assembly. We found that in Caenorhabditis elegans oocytes, endogenously-tagged Ran-GEF dissociates from chromatin during spindle assembly but re-associates during meiotic anaphase. Meiotic spindle assembly occurred after auxin-induced degradation of Ran-GEF, but anaphase I was faster than controls and extrusion of the first polar body frequently failed. In search of a possible alternative pathway for spindle assembly, we found that soluble tubulin concentrates in the nuclear volume during germinal vesicle breakdown. We found that the concentration of soluble tubulin in the metaphase spindle region is enclosed by ER sheets which exclude cytoplasmic organelles including mitochondria and yolk granules. Measurement of the volume occupied by yolk granules and mitochondria indicated that volume exclusion would be sufficient to explain the concentration of tubulin in the spindle volume. We suggest that this concentration of soluble tubulin may be a redundant mechanism promoting spindle assembly near chromosomes.
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  • 文章类型: Journal Article
    Micro-nano plastics have been reported as important carriers of polycyclic aromatic hydrocarbons (PAHs) for long-distance migration in the environment. However, the combined toxicity from long-term chronic exposure beyond the vehicle-release mechanism remains elusive. In this study, we investigated the synergistic action of Benzo[a]pyrene (BaP) and Polystyrene nanoparticles (PS) in Caenorhabditis elegans (C. elegans) as a combined exposure model with environmental concentrations. We found that the combined exposure to BaP and PS, as opposed to single exposures at low concentrations, significantly shortened the lifespan of C. elegans, leading to the occurrence of multiple senescence phenotypes. Multi-omics data indicated that the combined exposure to BaP and PS is associated with the disruption of glutathione homeostasis. Consequently, the accumulated reactive oxygen species (ROS) cannot be effectively cleared, which is highly correlated with mitochondrial dysfunction. Moreover, the increase in ROS promoted lipid peroxidation in C. elegans and downregulated Ferritin-1 (Ftn-1), resulting in ferroptosis and ultimately accelerating the aging process of C. elegans. Collectively, our study provides a new perspective to explain the long-term compound toxicity caused by BaP and PS at real-world exposure concentrations.
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  • 文章类型: Journal Article
    Phoresy是一种种间相互作用,通过附着于更具流动性的物种来促进空间分散。搭便车的物种已经进化出身体接触和成功对抗的特定特征,但是涉及这些特征及其进化的调节机制在很大程度上尚未被探索。线虫秀丽隐杆线虫在其应激诱导的发育阶段表现出一种搭便车行为,称为“顺风车”。Dauer特异性的咀嚼行为在自然秀丽隐杆线虫种群中具有重要作用,经历了繁荣与萧条的人口动态。在这项研究中,我们调查了在世界各地采样的137个野生秀丽隐杆线虫菌株的优良行为。我们确定了物种范围内的自然变异,并进行了全基因组关联作图。我们显示nta-1启动子中的变体,编码推定的类固醇生成酶,在回音方面存在差异。这种差异是由于神经胶质细胞中nta-1表达的变化,这意味着神经胶质类固醇代谢调节电泳行为。种群遗传分析和地理分布模式表明,平衡选择维持了祖先C.elegans种群中存在的两个nta-1单倍型。我们的发现有助于进一步了解物种相互作用的分子机制以及维持自然种群内的遗传多样性。
    Phoresy is an interspecies interaction that facilitates spatial dispersal by attaching to a more mobile species. Hitchhiking species have evolved specific traits for physical contact and successful phoresy, but the regulatory mechanisms involved in such traits and their evolution are largely unexplored. The nematode Caenorhabditis elegans displays a hitchhiking behavior known as nictation during its stress-induced developmental stage. Dauer-specific nictation behavior has an important role in natural C. elegans populations, which experience boom-and-bust population dynamics. In this study, we investigated the nictation behavior of 137 wild C. elegans strains sampled throughout the world. We identified species-wide natural variation in nictation and performed a genome-wide association mapping. We show that the variants in the promoter of nta-1, encoding a putative steroidogenic enzyme, underlie differences in nictation. This difference is due to the changes in nta-1 expression in glial cells, which implies that glial steroid metabolism regulates phoretic behavior. Population genetic analysis and geographic distribution patterns suggest that balancing selection maintained two nta-1 haplotypes that existed in ancestral C. elegans populations. Our findings contribute to further understanding of the molecular mechanism of species interaction and the maintenance of genetic diversity within natural populations.
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  • 文章类型: Journal Article
    2K4L是短α-螺旋肽temporin-1CEc的合理设计的类似物,一种通过取代氨基酸残基从中国褐蛙林蛙的皮肤分泌物中分离和纯化的天然肽。2K4L在体外显示出比temporin-1CEc提高的广谱抗菌活性。这里,2K4L在巨噬细胞中的抗菌和抗炎活性,研究了秀丽隐杆线虫和小鼠。结果表明,2K4L可以进入THP-1细胞杀死多药耐药鲍曼不动杆菌(MRAB0227)和敏感鲍曼不动杆菌(AB22933),以及通过抑制NF-κB信号通路减少MRAB0227诱导的促炎反应。同样,2K4L对鲍曼不动杆菌吸收秀丽隐杆线虫表现出很强的杀菌活性,延长线虫的寿命和健康。同时,2K4L通过抑制p38MAPK/PMK-1信号通路中核心基因的表达和下调p38的磷酸化水平来缓解氧化应激反应,从而保护线虫免受鲍曼不动杆菌的损伤。最后,在LPS诱导的脓毒症模型中,2K4L通过抑制MAPK和NF-κB信号通路的信号蛋白表达并保护LPS诱导的脓毒症小鼠免受致死性炎症反应,从而增强脓毒症小鼠的存活并减少促炎细胞因子的产生。总之,2K4L在体外和体内都改善了LPS诱导的炎症。
    2K4L is a rationally designed analog of the short α-helical peptide temporin-1CEc, a natural peptide isolated and purified from the skin secretions of the Chinese brown frog Rana chensinensis by substituting amino acid residues. 2K4L displayed improved and broad-spectrum antibacterial activity than temporin-1CEc in vitro. Here, the antibacterial and anti-inflammatory activities of 2K4L in macrophages, C. elegans and mice were investigated. The results demonstrated that 2K4L could enter THP-1 cells to kill a multidrug-resistant Acinetobacter baumannii strain (MRAB 0227) and a sensitive A. baumannii strain (AB 22933), as well as reduce proinflammatory responses induced by MRAB 0227 by inhibiting NF-κB signaling pathway. Similarly, 2K4L exhibited strong bactericidal activity against A. baumannii uptake into C. elegans, extending the lifespan and healthspan of the nematodes. Meanwhile, 2K4L alleviated the oxidative stress response by inhibiting the expression of core genes in the p38 MAPK/PMK-1 signaling pathway and downregulating the phosphorylation level of p38, thereby protecting the nematodes from damage by A. baumannii. Finally, in an LPS-induced septic model, 2K4L enhanced the survival of septic mice and decreased the production of proinflammatory cytokines by inhibiting the signaling protein expression of the MAPK and NF-κB signaling pathways and protecting LPS-induced septic mice from a lethal inflammatory response. In conclusion, 2K4L ameliorated LPS-induced inflammation both in vitro and in vivo.
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  • 文章类型: Journal Article
    微管蛋白翻译后修饰(PTM)调节微管的动态特性及其与其他蛋白质的相互作用。然而,微管蛋白PTM的作用通常通过修饰酶的缺失或微管蛋白突变体的过表达间接揭示。在这项研究中,我们直接编辑内源性微管蛋白基因座来安装PTM模拟或致残突变,并研究它们对微管稳定性的影响,神经突生长,轴突再生,货物运输,秀丽隐杆线虫触觉受体神经元的感觉功能。我们发现β-微管蛋白S172磷酸化和K252乙酰化状态强烈影响微管动力学,神经突生长,和再生,而α-微管蛋白K40乙酰化作用影响不大。微管蛋白C末端尾部的聚谷氨酸化和去酪氨酸可能通过调节与驱动蛋白13的相互作用而对微管稳定性产生更微妙的影响。总的来说,我们的研究系统地评估和比较了几种微管蛋白PTM对神经元分化和再生的影响,并建立了一个体内平台来测试微管蛋白PTM在神经元中的功能.
    Tubulin posttranslational modifications (PTMs) modulate the dynamic properties of microtubules and their interactions with other proteins. However, the effects of tubulin PTMs were often revealed indirectly through the deletion of modifying enzymes or the overexpression of tubulin mutants. In this study, we directly edited the endogenous tubulin loci to install PTM-mimicking or -disabling mutations and studied their effects on microtubule stability, neurite outgrowth, axonal regeneration, cargo transport, and sensory functions in the touch receptor neurons of Caenorhabditis elegans. We found that the status of β-tubulin S172 phosphorylation and K252 acetylation strongly affected microtubule dynamics, neurite growth, and regeneration, whereas α-tubulin K40 acetylation had little influence. Polyglutamylation and detyrosination in the tubulin C-terminal tail had more subtle effects on microtubule stability likely by modulating the interaction with kinesin-13. Overall, our study systematically assessed and compared several tubulin PTMs for their impacts on neuronal differentiation and regeneration and established an in vivo platform to test the function of tubulin PTMs in neurons.
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  • 文章类型: Journal Article
    为了研究抗菌素耐药性的潜在后果,我们进行了适应性实验室进化分析(ALE),以分离出鼠伤寒沙门氏菌的三种抗性变体(RV),采用三种不同类型的食品保存方法:1)紧急技术,血浆活化水(PAW),导致变异的RV-PAW;一种传统的方法,热,导致变异的RV-HT,和一种天然的抗菌化合物,香芹酚,导致变型RV-CAR。抗血浆活化水的变种,RV-PAW,在rpoA和rpoD中发生突变;它显示出对橙汁中热量的耐受性增加,但最终不会构成重大威胁,因为它在制冷温度(8°C)下表现出健身成本,而其对秀丽隐杆线虫的毒力下降。耐热的变体,RV-HT,在flhC有突变,dnaJ:它在高生长温度(43°C)下表现出健身成本,并诱导秀丽隐杆线虫的形态功能改变。对香芹酚具有抗性的变体,RV-CAR,sseG有突变,flha,wbaV,这种变种不仅在实验室培养基和食物模型中表现出明显更高的耐热性,而且还有效地增加了其在冷藏温度下的生长适应性,同时保持了其毒力,秀丽隐杆线虫中Smurf表型的百分比最高。为了应对这些挑战,我们应用了一种将热处理与柠檬醛相结合的工艺,目的是利用橙汁热处理对房车造成的亚致死性损害。该方法实现了增强的微生物灭活,而不必提高热处理的强度。在RV-CAR的情况下,结果尤其令人鼓舞,最具挑战性的菌株,为此,我们通过多达3个log10失活周期提高了致死率。
    To study potential ramifications of antimicrobial resistance, we carried out adaptive laboratory evolution assays (ALE) to isolate three resistant variants (RVs) of Salmonella enterica Typhimurium, employing three different types of food preservation methods: 1) an emergent technology, plasma-activated water (PAW), leading to variant RV-PAW; a traditional method, heat, leading to variant RV-HT, and a natural antimicrobial compound, carvacrol, leading to variant RV-CAR. The variant resistant to plasma-activated water, RV-PAW, had mutations in rpoA and rpoD; it showed increased tolerance to heat in orange juice but ultimately did not pose a significant threat, as it exhibited a fitness cost at refrigeration temperature (8 °C), whereas its virulence against Caenorhabditis elegans decreased. The variant resistant to heat, RV-HT, had mutations in flhC, dnaJ: it exhibited a fitness cost at high growth temperatures (43 °C) and induced morphofunctional alterations in C. elegans. The variant resistant to carvacrol, RV-CAR, had mutations in sseG, flhA, wbaV, lon; this variant not only exhibited significantly higher thermotolerance in both laboratory media and food models but also effectively increased its growth fitness at refrigeration temperatures while retaining its virulence, evidenced by the highest percentage of Smurf phenotype in C. elegans. To address these challenges, we applied a process combining thermal treatment with citral, with the aim of leveraging the sublethal damage caused in RVs by heat treatments in orange juice. This approach achieves enhanced microbial inactivation without having to escalate the intensity of the thermal treatment. The result was particularly encouraging in the case of RV-CAR, the most challenging strain, for which we improved lethality by up to 3 log10 inactivation cycles.
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  • 文章类型: Journal Article
    小球藻具有多种生物活性,其药理作用值得进一步探讨。在这项研究中,研究了小球藻多糖提取物(CPE)的抗氧化和抗衰老活性。进一步的研究表明,CPE表现出抗衰老,和体内抗氧化活性,包括延长的秀丽隐杆线虫抗压能力,脂褐素沉积减少,淀粉样β蛋白对迁移率的影响降低,活性氧水平降低,抗氧化酶活性增加。此外,它显著增加了抗应激和长寿基因的表达,降低了衰老相关基因的表达;因此,据推测,CPE延缓年龄效应的机制与胰岛素信号通路有关.总之,CPE可以延缓老化,为CPE的应用和发展提供了新的途径。
    Chlorella has a variety of biological activities, and it is worth further exploring its pharmacological effects. In this study, we investigated the antioxidant and anti-ageing activities of Chlorella polysaccharide extract (CPE). Further studies revealed that CPE exhibited anti-ageing, and antioxidant activities in vivo, including an extended Caenorhabditis elegans stress resistance, decreased deposition of lipofuscin, and reduced effects of amyloid β protein on mobility, decreased levels of reactive oxygen species and increased activity of antioxidant enzymes. Moreover, it dramatically increased the expression of anti-stress and longevity genes and reduced the expression of ageing-related genes; therefore, it was hypothesised that the mechanism of the age-delaying effect of CPE was related to the insulin signalling pathway. In summary, CPE could delay ageing and provide a new avenue for the application and development of CPE.
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