Caenorhabditis elegans

秀丽隐杆线虫
  • 文章类型: Journal Article
    金奇乳球菌是从商业泡菜中分离出来的,这是一种传统的韩国发酵食品。进行这项研究以评估L.kimchii的益生菌作用。秀丽隐杆线虫被喂食了金奇乳杆菌,和它的寿命,运动性,和基因表达进行了检查。当饲喂大肠杆菌OP50和L.kimchii(OP+LK)的1:1混合物时,与单独喂食OP相比,秀丽隐杆线虫的寿命和运动能力明显更长。OP+LK组和OP组之间的育苗大小没有显著差异,这表明这些影响是以不依赖饮食限制的方式发生的.RNA测序和基因本体分析表明,胰岛素样肽和胰岛素受体激动剂ins-20的表达,在OP+LK组中显著上调。ins-20突变消除了OPLK对寿命延长和运动的影响。此外,OP+LK未能延长缺乏胰岛素样信号通路受体daf-2的秀丽隐杆线虫的寿命。这些结果表明,L.kimchii延长了寿命,并通过胰岛素信号通路缓解了C.elegans的运动能力下降,强调使用L.kimchii作为益生菌和益生菌的有益细菌的潜力。
    Lactococcus kimchii is isolated from commercial kimchi, which is a traditional Korean fermented food. This study was conducted to evaluate the probiotic effects of L. kimchii. Caenorhabditis elegans was fed L. kimchii, and its longevity, motility, and gene expression were examined. When fed a 1:1 mixture of Escherichia coli OP50 and L. kimchii (OP+LK), C. elegans had a significantly longer lifespan and increased locomotion than when it was fed OP alone. There was no significant difference in brood size between the OP+LK and OP groups, suggesting that these effects occurred in a dietary restriction-independent manner. RNA sequencing and Gene Ontology analysis showed that the expression of ins-20, an insulin-like peptide and agonist of the insulin receptor, was significantly upregulated in the OP+LK group. The ins-20 mutation annulled the effects of OP+LK on lifespan extension and motility. In addition, OP+LK failed to extend the lifespan of C. elegans deficient in daf-2, a receptor for the insulin-like signaling pathway. These results suggest that L. kimchii extends the lifespan and alleviates motility decline in C. elegans through the insulin signaling pathway, highlighting the potential of using L. kimchii as a beneficial bacterium for probiotics and postbiotics.
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  • 文章类型: Journal Article
    精确的发育时序控制对于生物体的形成和功能至关重要,但其机制尚不清楚。在秀丽隐杆线虫中,microRNAlin-4通过转录后下调幼虫期命运控制因子LIN-14来严格调节发育时机。然而,在第一个幼虫期结束时触发lin-4表达激活的机制仍然未知。我们证明跨膜转录因子MYRF-1对于lin-4激活是必需的。MYRF-1最初位于细胞膜上,其增加的裂解和核积累与lin-4表达时间一致。MYRF-1调节细胞自主的lin-4表达,过度活跃的MYRF-1可以过早地驱动胚胎和年轻的第一阶段幼虫中的lin-4表达。串联lin-4启动子DNA募集MYRF-1GFP在细胞核中形成可见基因座,提示MYRF-1直接与lin-4启动子结合。我们的发现确定了理解发育时序调节的关键环节,并将MYRF-1确立为lin-4表达的关键调节因子。
    Precise developmental timing control is essential for organism formation and function, but its mechanisms are unclear. In C. elegans, the microRNA lin-4 critically regulates developmental timing by post-transcriptionally downregulating the larval-stage-fate controller LIN-14. However, the mechanisms triggering the activation of lin-4 expression toward the end of the first larval stage remain unknown. We demonstrate that the transmembrane transcription factor MYRF-1 is necessary for lin-4 activation. MYRF-1 is initially localized on the cell membrane, and its increased cleavage and nuclear accumulation coincide with lin-4 expression timing. MYRF-1 regulates lin-4 expression cell-autonomously and hyperactive MYRF-1 can prematurely drive lin-4 expression in embryos and young first-stage larvae. The tandem lin-4 promoter DNA recruits MYRF-1GFP to form visible loci in the nucleus, suggesting that MYRF-1 directly binds to the lin-4 promoter. Our findings identify a crucial link in understanding developmental timing regulation and establish MYRF-1 as a key regulator of lin-4 expression.
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  • 文章类型: Journal Article
    在许多动物物种中,卵母细胞减数分裂纺锤体,这是染色体分离所必需的,没有中心体的形式。在某些系统中,Ran-GEF对染色质启动纺锤体组装。我们发现在秀丽隐杆线虫的卵母细胞中,内源性标记的Ran-GEF在纺锤体组装过程中与染色质分离,但在减数分裂后期重新缔合。生长素诱导Ran-GEF降解后发生减数分裂纺锤体组装,但是后期我比对照组快,第一极体的挤压经常失败。寻找主轴装配的可能替代途径,我们发现,在生发囊泡破裂期间,可溶性微管蛋白集中在核体积中。我们发现,中期纺锤体区域中可溶性微管蛋白的浓度被ER片包围,ER片排除了包括线粒体和卵黄颗粒在内的细胞质细胞器。测量卵黄颗粒和线粒体占据的体积表明,体积排除足以解释纺锤体体积中微管蛋白的浓度。我们建议,这种可溶性微管蛋白的浓度可能是促进染色体附近纺锤体组装的冗余机制。
    In many animal species, the oocyte meiotic spindle, which is required for chromosome segregation, forms without centrosomes. In some systems, Ran-GEF on chromatin initiates spindle assembly. We found that in Caenorhabditis elegans oocytes, endogenously-tagged Ran-GEF dissociates from chromatin during spindle assembly but re-associates during meiotic anaphase. Meiotic spindle assembly occurred after auxin-induced degradation of Ran-GEF, but anaphase I was faster than controls and extrusion of the first polar body frequently failed. In search of a possible alternative pathway for spindle assembly, we found that soluble tubulin concentrates in the nuclear volume during germinal vesicle breakdown. We found that the concentration of soluble tubulin in the metaphase spindle region is enclosed by ER sheets which exclude cytoplasmic organelles including mitochondria and yolk granules. Measurement of the volume occupied by yolk granules and mitochondria indicated that volume exclusion would be sufficient to explain the concentration of tubulin in the spindle volume. We suggest that this concentration of soluble tubulin may be a redundant mechanism promoting spindle assembly near chromosomes.
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  • 文章类型: Journal Article
    2K4L是短α-螺旋肽temporin-1CEc的合理设计的类似物,一种通过取代氨基酸残基从中国褐蛙林蛙的皮肤分泌物中分离和纯化的天然肽。2K4L在体外显示出比temporin-1CEc提高的广谱抗菌活性。这里,2K4L在巨噬细胞中的抗菌和抗炎活性,研究了秀丽隐杆线虫和小鼠。结果表明,2K4L可以进入THP-1细胞杀死多药耐药鲍曼不动杆菌(MRAB0227)和敏感鲍曼不动杆菌(AB22933),以及通过抑制NF-κB信号通路减少MRAB0227诱导的促炎反应。同样,2K4L对鲍曼不动杆菌吸收秀丽隐杆线虫表现出很强的杀菌活性,延长线虫的寿命和健康。同时,2K4L通过抑制p38MAPK/PMK-1信号通路中核心基因的表达和下调p38的磷酸化水平来缓解氧化应激反应,从而保护线虫免受鲍曼不动杆菌的损伤。最后,在LPS诱导的脓毒症模型中,2K4L通过抑制MAPK和NF-κB信号通路的信号蛋白表达并保护LPS诱导的脓毒症小鼠免受致死性炎症反应,从而增强脓毒症小鼠的存活并减少促炎细胞因子的产生。总之,2K4L在体外和体内都改善了LPS诱导的炎症。
    2K4L is a rationally designed analog of the short α-helical peptide temporin-1CEc, a natural peptide isolated and purified from the skin secretions of the Chinese brown frog Rana chensinensis by substituting amino acid residues. 2K4L displayed improved and broad-spectrum antibacterial activity than temporin-1CEc in vitro. Here, the antibacterial and anti-inflammatory activities of 2K4L in macrophages, C. elegans and mice were investigated. The results demonstrated that 2K4L could enter THP-1 cells to kill a multidrug-resistant Acinetobacter baumannii strain (MRAB 0227) and a sensitive A. baumannii strain (AB 22933), as well as reduce proinflammatory responses induced by MRAB 0227 by inhibiting NF-κB signaling pathway. Similarly, 2K4L exhibited strong bactericidal activity against A. baumannii uptake into C. elegans, extending the lifespan and healthspan of the nematodes. Meanwhile, 2K4L alleviated the oxidative stress response by inhibiting the expression of core genes in the p38 MAPK/PMK-1 signaling pathway and downregulating the phosphorylation level of p38, thereby protecting the nematodes from damage by A. baumannii. Finally, in an LPS-induced septic model, 2K4L enhanced the survival of septic mice and decreased the production of proinflammatory cytokines by inhibiting the signaling protein expression of the MAPK and NF-κB signaling pathways and protecting LPS-induced septic mice from a lethal inflammatory response. In conclusion, 2K4L ameliorated LPS-induced inflammation both in vitro and in vivo.
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  • 文章类型: Journal Article
    微管蛋白翻译后修饰(PTM)调节微管的动态特性及其与其他蛋白质的相互作用。然而,微管蛋白PTM的作用通常通过修饰酶的缺失或微管蛋白突变体的过表达间接揭示。在这项研究中,我们直接编辑内源性微管蛋白基因座来安装PTM模拟或致残突变,并研究它们对微管稳定性的影响,神经突生长,轴突再生,货物运输,秀丽隐杆线虫触觉受体神经元的感觉功能。我们发现β-微管蛋白S172磷酸化和K252乙酰化状态强烈影响微管动力学,神经突生长,和再生,而α-微管蛋白K40乙酰化作用影响不大。微管蛋白C末端尾部的聚谷氨酸化和去酪氨酸可能通过调节与驱动蛋白13的相互作用而对微管稳定性产生更微妙的影响。总的来说,我们的研究系统地评估和比较了几种微管蛋白PTM对神经元分化和再生的影响,并建立了一个体内平台来测试微管蛋白PTM在神经元中的功能.
    Tubulin posttranslational modifications (PTMs) modulate the dynamic properties of microtubules and their interactions with other proteins. However, the effects of tubulin PTMs were often revealed indirectly through the deletion of modifying enzymes or the overexpression of tubulin mutants. In this study, we directly edited the endogenous tubulin loci to install PTM-mimicking or -disabling mutations and studied their effects on microtubule stability, neurite outgrowth, axonal regeneration, cargo transport, and sensory functions in the touch receptor neurons of Caenorhabditis elegans. We found that the status of β-tubulin S172 phosphorylation and K252 acetylation strongly affected microtubule dynamics, neurite growth, and regeneration, whereas α-tubulin K40 acetylation had little influence. Polyglutamylation and detyrosination in the tubulin C-terminal tail had more subtle effects on microtubule stability likely by modulating the interaction with kinesin-13. Overall, our study systematically assessed and compared several tubulin PTMs for their impacts on neuronal differentiation and regeneration and established an in vivo platform to test the function of tubulin PTMs in neurons.
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  • 文章类型: Journal Article
    纵观历史,人类依靠植物作为药物来源,调味,和食物。植物合成大型化学文库,并将许多这些化合物释放到根际和大气中,在那里它们会影响动物和微生物的行为。为了生存,线虫必须具有区分植物制造的小分子(SM)的感官能力,这些小分子是有害的,必须避免与有益的,应该寻求。这种将化学线索分类为其价值函数的能力是嗅觉的基础,代表了许多动物共有的能力,包括人类。这里,我们提出了一种基于多孔板的高效平台,液体处理仪表,廉价的光学扫描仪,和定制的软件,可以有效地确定模型线虫中单个SM的效价(吸引或排斥),秀丽隐杆线虫.使用这个集成的硬件-wetware-软件平台,我们筛选了90种植物SMs,并鉴定出37种吸引或排斥野生型动物,但对化学感应转导缺陷的突变体没有影响。遗传解剖表明,对于这些SMs中的至少10个,反应价来自相反信号的整合,认为嗅觉效价通常是通过整合多个信息线上的化学感应信号来确定的。这项研究表明,秀丽隐杆线虫是确定趋化性效价和鉴定化学感觉神经系统检测到的天然产物的有效发现引擎。
    Throughout history, humans have relied on plants as a source of medication, flavoring, and food. Plants synthesize large chemical libraries and release many of these compounds into the rhizosphere and atmosphere where they affect animal and microbe behavior. To survive, nematodes must have evolved the sensory capacity to distinguish plant-made small molecules (SMs) that are harmful and must be avoided from those that are beneficial and should be sought. This ability to classify chemical cues as a function of their value is fundamental to olfaction and represents a capacity shared by many animals, including humans. Here, we present an efficient platform based on multiwell plates, liquid handling instrumentation, inexpensive optical scanners, and bespoke software that can efficiently determine the valence (attraction or repulsion) of single SMs in the model nematode, Caenorhabditis elegans. Using this integrated hardware-wetware-software platform, we screened 90 plant SMs and identified 37 that attracted or repelled wild-type animals but had no effect on mutants defective in chemosensory transduction. Genetic dissection indicates that for at least 10 of these SMs, response valence emerges from the integration of opposing signals, arguing that olfactory valence is often determined by integrating chemosensory signals over multiple lines of information. This study establishes that C. elegans is an effective discovery engine for determining chemotaxis valence and for identifying natural products detected by the chemosensory nervous system.
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  • 文章类型: Journal Article
    发酵食品,包括奶酪,近年来,它们对健康的潜在益处越来越感兴趣。本研究探讨了八种法国生乳奶酪-山羊奶酪的生物学特性,圣Nectaire,Cantal,布鲁·奥弗涅,Roquefort,Comté,BriedeMeaux,和使用体内(秀丽隐杆线虫)和体外(人白细胞)模型的Epoises-on氧化过程。对奶酪分馏方案进行了调整,以研究每种奶酪的四个馏分:对应于整个奶酪的冻干馏分(FDC),极地(ApE),和两种极性提取物(W40和W70)。我们表明,所有奶酪级分都显着改善了秀丽隐杆线虫(C.秀丽隐杆线虫)暴露于氧化条件时的存活率是对照组的五倍,无论分馏方案和奶酪类型。它们还能够在氧化条件下将体内活性氧(ROS)的积累减少多达70%,从而保护秀丽隐杆线虫免受氧化损伤。这些有益作用可通过人白细胞中体外ROS产生的减少高达50%以及C中抗氧化因子编码基因(daf-16,skn-1,ctl-2和sod-3)的过表达来解释。
    Fermented foods, including cheeses, have garnered increased interest in recent years for their potential health benefits. This study explores the biological properties of eight French raw-milk cheeses-goat cheese, Saint-Nectaire, Cantal, Bleu d\'Auvergne, Roquefort, Comté, Brie de Meaux, and Epoisses-on oxidative processes using both in vivo (Caenorhabditis elegans) and in vitro (human leukocytes) models. A cheese fractionation protocol was adapted to study four fractions for each cheese: a freeze-dried fraction (FDC) corresponding to whole cheese, an apolar (ApE), and two polar extracts (W40 and W70). We showed that all cheese fractions significantly improved Caenorhabditis elegans (C. elegans) survival rates when exposed to oxidative conditions by up to five times compared to the control, regardless of the fractionation protocol and the cheese type. They were also all able to reduce the in vivo accumulation of reactive oxygen species (ROS) by up to 70% under oxidative conditions, thereby safeguarding C. elegans from oxidative damage. These beneficial effects were explained by a reduction in ROS production up to 50% in vitro in human leukocytes and overexpression of antioxidant factor-encoding genes (daf-16, skn-1, ctl-2, and sod-3) in C. elegans.
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  • 文章类型: Journal Article
    紫外线B(UVB)暴露会导致皮肤光老化。山茱萸富含熊果酸(UA),有利于预防光老化。因为UA难溶于水,以水为反溶剂,从山茱萸的粗提物中分离出含有UA的成分,得到山茱萸提取物(COE)。使用秀丽隐杆线虫评估COE对UVB损伤的影响。结果表明,COE可以增加UVB暴露的秀丽隐杆线虫的寿命和抗氧化酶活性,同时降低活性氧(ROS)水平。同时,COE上调抗氧化相关基因的表达并促进SKN-1向细胞核的迁移。此外,COE抑制了暴露于UVB的skn-1突变体中skn-1下游基因的表达和寿命的延长,表明SKN-1是COE发挥作用所必需的。我们的发现表明,COE主要通过SKN-1/Nrf2途径改善UVB在秀丽隐杆线虫中引起的氧化应激。
    Ultraviolet B (UVB) exposure can contribute to photoaging of skin. Cornus officinalis is rich in ursolic acid (UA), which is beneficial to the prevention of photoaging. Because UA is hardly soluble in water, the Cornus officinalis extract (COE) was obtained using water as the antisolvent to separate the components containing UA from the crude extract of Cornus officinalis. The effect of COE on UVB damage was assessed using Caenorhabditis elegans. The results showed that COE could increase the lifespan and enhance the antioxidant enzyme activity of C. elegans exposed to UVB while decreasing the reactive oxygen species (ROS) level. At the same time, COE upregulated the expression of antioxidant-related genes and promoted the migration of SKN-1 to the nucleus. Moreover, COE inhibited the expression of the skn-1 downstream gene and the extension of the lifespan in skn-1 mutants exposed to UVB, indicating that SKN-1 was required for COE to function. Our findings indicate that COE mainly ameliorates the oxidative stress caused by UVB in C. elegans via the SKN-1/Nrf2 pathway.
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  • 文章类型: Journal Article
    微生物构成了地球上最普遍的生命形式,然而,他们非凡的多样性仍然大多没有得到承认。脊椎动物模型中的微生物多样性对研究宿主-微生物组相互作用提出了重大挑战。模型生物秀丽隐杆线虫在描述宿主遗传学对微生物组成的影响方面具有许多优势。在野外,秀丽隐杆线虫的肠道含有各种微生物,而在实验室中,它通常是单个细菌物种的宿主。微生物代谢物之间存在潜在的宿主-微生物相互作用,毒品,和秀丽隐杆线虫表型。这篇小型综述旨在总结目前对秀丽隐杆线虫微生物组的理解。讨论了使用秀丽隐杆线虫研究宿主-微生物-代谢物相互作用的示例。
    Microbes constitute the most prevalent life form on Earth, yet their remarkable diversity remains mostly unrecognized. Microbial diversity in vertebrate models presents a significant challenge for investigating host-microbiome interactions. The model organism Caenorhabditis elegans has many advantages for delineating the effects of host genetics on microbial composition. In the wild, the C. elegans gut contains various microbial species, while in the laboratory it is usually a host for a single bacterial species. There is a potential host-microbe interaction between microbial metabolites, drugs, and C. elegans phenotypes. This mini-review aims to summarize the current understanding regarding the microbiome in C. elegans. Examples using C. elegans to study host-microbe-metabolite interactions are discussed.
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  • 文章类型: Journal Article
    酒精使用障碍(AUD)是一种慢性神经行为疾病,其特征是耐受性发展的周期,消费增加,并在戒断期间恢复渴望和寻求行为。了解AUD的复杂机制需要可靠的动物模型来反映其关键特征。秀丽隐杆线虫(C.elegans),具有保守的神经系统和遗传可操作性,已成为研究AUD的有价值的模型生物。这里,我们在秀丽隐杆线虫中使用乙醇蒸气暴露模型,概述AUD功能,同时保持高吞吐量可扩展性。我们证明了乙醇蒸气暴露会诱导类似中毒的行为,急性耐受,和乙醇偏好,类似于哺乳动物AUD特征。利用这种模式,我们阐明了c-junN末端激酶(JNK)信号在介导急性乙醇耐受中的保守作用.缺乏JNK信号传导组件的突变体表现出受损的耐受性发展,强调JNK的积极监管。此外,我们在秀丽隐杆线虫中检测到乙醇诱导的JNK激活。我们的发现强调了C.elegans与乙醇蒸气暴露在研究AUD中的实用性,并通过JNK信号传导对急性乙醇耐受的分子机制提供了新的见解。
    Alcohol use disorder (AUD) is a chronic neurobehavioral condition characterized by a cycle of tolerance development, increased consumption, and reinstated craving and seeking behaviors during withdrawal. Understanding the intricate mechanisms of AUD necessitates reliable animal models reflecting its key features. Caenorhabditis elegans (C. elegans), with its conserved nervous system and genetic tractability, has emerged as a valuable model organism to study AUD. Here, we employ an ethanol vapor exposure model in Caenorhabditis elegans, recapitulating AUD features while maintaining high-throughput scalability. We demonstrate that ethanol vapor exposure induces intoxication-like behaviors, acute tolerance, and ethanol preference, akin to mammalian AUD traits. Leveraging this model, we elucidate the conserved role of c-jun N-terminal kinase (JNK) signaling in mediating acute ethanol tolerance. Mutants lacking JNK signaling components exhibit impaired tolerance development, highlighting JNK\'s positive regulation. Furthermore, we detect ethanol-induced JNK activation in C. elegans. Our findings underscore the utility of C. elegans with ethanol vapor exposure for studying AUD and offer novel insights into the molecular mechanisms underlying acute ethanol tolerance through JNK signaling.
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