Bacterial Infections

细菌感染
  • 文章类型: Journal Article
    应用染料了解感染的病因激发了抗菌化学疗法和第一波抗菌药物。第二波抗菌药物的发现是由天然产物的快速发现推动的,现在占目前抗菌药物的69%。但是现在已经发现了最普遍的天然产物,必须筛选107种新的居住在土壤中的细菌物种,以发现一类新的天然产物。因此,而不是第三波抗菌药物的发现,现在有一个发现瓶颈。与数十亿年的微生物拮抗作用所产生的天然产物不同,广阔的合成化学空间仍然需要通过抗菌药物的治疗科学进行人工管理-对小分子如何与细菌生理学相互作用的系统理解,影响所需的表型,并使主机受益。细菌分子遗传学可以阐明与治疗发展相关的病原体生物学,但它也可以直接应用于理解具有新作用机制的新化学试剂的机制和责任。因此,通过将化学专业知识与细菌感染生物学的系统解剖相结合,可以实现抗菌药物发现的下一阶段。面对雄心勃勃的努力,寻找来自自然界或新自然界的新分子来治愈细菌感染,现代化学生物学和分子遗传学提供的能力可用于寻找新靶标的化学调节剂,以规避普遍的抗性机制。
    The application of dyes to understanding the aetiology of infection inspired antimicrobial chemotherapy and the first wave of antibacterial drugs. The second wave of antibacterial drug discovery was driven by rapid discovery of natural products, now making up 69% of current antibacterial drugs. But now with the most prevalent natural products already discovered, ∼107 new soil-dwelling bacterial species must be screened to discover one new class of natural product. Therefore, instead of a third wave of antibacterial drug discovery, there is now a discovery bottleneck. Unlike natural products which are curated by billions of years of microbial antagonism, the vast synthetic chemical space still requires artificial curation through the therapeutics science of antibacterial drugs - a systematic understanding of how small molecules interact with bacterial physiology, effect desired phenotypes, and benefit the host. Bacterial molecular genetics can elucidate pathogen biology relevant to therapeutics development, but it can also be applied directly to understanding mechanisms and liabilities of new chemical agents with new mechanisms of action. Therefore, the next phase of antibacterial drug discovery could be enabled by integrating chemical expertise with systematic dissection of bacterial infection biology. Facing the ambitious endeavour to find new molecules from nature or new-to-nature which cure bacterial infections, the capabilities furnished by modern chemical biology and molecular genetics can be applied to prospecting for chemical modulators of new targets which circumvent prevalent resistance mechanisms.
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  • 文章类型: Journal Article
    自发性早产被定义为怀孕第37周之前出生过程的开始。胎膜中微生物的存在伴随着前列腺素产量的增加,与早产患病率相关的重要因素之一。微生物的入侵导致蛋白酶的产生,凝固酶,和弹性蛋白酶,这直接刺激了分娩的开始。我们调查了生殖器感染在早产妇女中的作用。
    本病例对照研究是在伊朗西部对100名自发性早产妇女(妊娠24周后和36周零6天之前)作为病例组进行的,100名正常分娩的妇女作为对照。采用问卷收集数据。对胎盘进行聚合酶链反应和病理检查。
    正常分娩妇女的平均年龄(30.92±5.10),自发性早产妇女(30.27±4.93)。沙眼衣原体的患病率,淋病奈瑟菌,单核细胞增生李斯特菌,两组生殖道支原体感染均为零。在病例组中,阴道加德纳菌的患病率最高,为19(19%),在对照组中为小脲原体15(15%)。此外,胎盘炎症在对照组中为零,在患者组中为7(7%)。阴道加德纳菌与自发性早产之间存在显着关系。
    我们的研究结果表明,除了阴道加德纳菌,上述细菌感染与自发性早产无明显关系。此外,尽管在这项研究中许多性传播感染的患病率显着降低,仍然建议提高人们的意识,包括孕妇,关于妇科医生和健康治疗中心传播它的方式。
    UNASSIGNED: Spontaneous preterm delivery is defined as the beginning of the birth process before the 37th week of pregnancy. The presence of microorganisms in the fetal membranes is accompanied by an increase in the production of prostaglandin, one of the important factors associated with the prevalence of preterm birth. The invasion of microorganisms leads to the production of protease, coagulase, and elastase, which directly stimulate the onset of childbirth. We investigated the role of genital infections in women with preterm birth.
    UNASSIGNED: The present case-control study was conducted in the west of Iran on 100 women with spontaneous preterm delivery (following 24 weeks of gestation and before 36 weeks and 6 days) as the case group and 100 women with normal delivery as controls. A questionnaire was applied to collect the data. Polymerase chain reaction and pathological examination of the placenta were performed.
    UNASSIGNED: The average age in women with normal delivery (30.92 ± 5.10) in women with spontaneous preterm delivery (30.27 ± 4.93). The prevalence of Chlamydia trachomatis, Neisseria gonorrhea, Listeria monocytogenes, and Mycoplasma genitalium infections was zero in both groups. The highest prevalence of Gardnerella vaginalis was 19 (19%) in the case group and Ureaplasma parvum 15 (15%) in the control group. Also, Placental inflammation was zero in controls and 7(7%) in the patient group. There was a significant relationship between Gardnerella vaginalis bacteria and spontaneous preterm delivery.
    UNASSIGNED: The results of our study showed that except for Gardnerella vaginalis bacteria, there is no significant relationship between the above bacterial infections and spontaneous preterm birth. Moreover, despite the significant reduction in the prevalence of many sexually transmitted infections in this research, it is still suggested to increase the awareness of people, including pregnant women, about the ways it can be transmitted by gynecologists and health and treatment centers.
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  • 文章类型: Journal Article
    自发性细菌性腹膜炎(SBP)是腹水感染的致命并发症。儿童SBP的原因与成人不同,这些细菌经常对抗生素有抗药性。因此,这项研究调查了临床发现,细菌病因,SBP患儿的耐药性。
    这项研究是对所有新的小儿腹水患者进行的,他们被送进小儿胃肠病科,纳马齐医院,附属于设拉子医科大学(设拉子,伊朗)从2021年到2022年。所需数据,如人口统计信息,和临床信息,如全血细胞计数(CBC),红细胞沉降率(ESR),C反应蛋白(CRP),革兰氏染色,通过自动血液培养系统(BACTEC)进行血液培养,并通过圆盘扩散法收集腹水的抗菌图。最后,数据采用SPSS软件(26版)进行统计分析.此外,t检验,费希尔的精确,Mann-Whitney,数据分析采用卡方检验。在所有测试中,P≤0.05被认为具有统计学意义。
    本研究检查了62例腹水儿童,其中18例(29%)患有SBP。中位年龄(IQR)为2.5(8.1)岁。34(54.8%)的参与者是女孩。腹痛是患者最常见的临床表现(54%),腹痛与SBP之间存在显著关联(P=0.02)。在12个阳性腹水培养物中,凝固酶阴性葡萄球菌的频率最高(25%),其次是大肠杆菌(16.7%)。在总阳性培养物中,第三代头孢菌素的敏感性为25%。对于革兰氏阴性培养物,该灵敏度为33.3%,对于革兰氏阳性培养物,该灵敏度为16.6%。
    尽管第三代头孢菌素被推荐作为经验治疗SBP的主要抗生素,本研究发现细菌耐药性高。最后,经验性治疗应针对每个地区的细菌耐药性特征进行调整。
    UNASSIGNED: Spontaneous bacterial peritonitis (SBP) is a fatal complication of ascites fluid infection. The causes of SBP in children differ from those in adults, and these bacteria are frequently resistant to antibiotics. Therefore, this study investigated the clinical findings, bacterial etiology, and antimicrobial resistance in children with SBP.
    UNASSIGNED: This study was conducted on all new pediatric ascites patients, who were admitted to the Department of Pediatric Gastroenterology, Namazi Hospital, affiliated with Shiraz University of Medical Sciences (Shiraz, Iran) from 2021 to 2022. Required data such as demographic information, and clinical information such as complete blood count (CBC), erythrocyte sedimentation rate (ESR), C-reactive protein (CRP), Gram staining, blood culture by Automated Blood Culture System (BACTEC), and antibiogram of ascites fluids by disc diffusion method were all collected. Finally, the data were statistically analyzed using SPSS Software (version 26). Besides, the t test, Fisher\'s exact, Mann-Whitney, and Chi square tests were used for data analysis. In all tests, P≤0.05 was considered statistically significant.
    UNASSIGNED: The present study examined 62 children with ascites of which 18 (29%) had SBP. The median (IQR) age was 2.5 (8.1) years. Thirty-four (54.8%) of the participants were girls. Abdominal pain was the most common clinical manifestation in patients (54%), and there was a significant association between abdominal pain and SBP (P=0.02). In 12 positive ascites fluid cultures, coagulase-negative staphylococci had the highest frequency (25%), followed by Escherichia coli (16.7%). Third-generation cephalosporins had a 25% sensitivity in the total positive cultures. This sensitivity was 33.3% for Gram-negative cultures and 16.6% for Gram-positive cultures.
    UNASSIGNED: Although third-generation cephalosporins are recommended as the primary antibiotic for the empirical treatment of SBP, the present study found high bacterial resistance. Finally, empirical therapy should be tailored to each region\'s bacterial resistance features.
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  • 文章类型: Journal Article
    肝硬化和临床上显着的门静脉高压症患者发生细菌感染(BI)的风险很高,这是急性代偿失调和慢性急性肝衰竭的最常见触发因素。此外,代偿失调后,在不祥的恶性循环中,开发BI的风险进一步增加。BIs可能很微妙,所有患者入院时和病情恶化时都应排除。及时给予足够的经验性抗生素是治疗的基石。在这里,我们回顾了目前关于发病机制的证据,肝硬化和门脉高压患者BI的临床意义和管理。
    Patients with cirrhosis and clinically significant portal hypertension are at high risk of developing bacterial infections (BIs) that are the most common trigger of acute decompensation and acute-on-chronic liver failure. Furthermore, after decompensation, the risk of developing BIs further increases in an ominous vicious circle. BIs may be subtle, and they should be ruled out in all patients at admission and in case of deterioration. Timely administration of adequate empirical antibiotics is the cornerstone of treatment. Herein, we reviewed current evidences about pathogenesis, clinical implications and management of BIs in patients with cirrhosis and portal hypertension.
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  • 文章类型: Journal Article
    再利用药物是一种技术,用于发现新的,批准的药物分子的替代临床应用。它可能包括改变药物制剂,给药途径,剂量或剂量方案。重新利用药物的过程始于筛选先前批准的药物库,以确定目标疾病状况。如果在最初的计算机模拟之后,体外或体内实验,已发现该分子对特定靶标具有活性,该分子被认为是临床试验的良好候选者。由于此类分子的安全性特征可从先前的数据中获得,节省了大量的时间和资源。药物再利用方法的这些优点使其特别有助于为包括细菌感染在内的快速发展的病症寻找治疗。抗生素耐药性的发生率不断增加,由于细菌基因组的突变,导致许多批准的抗生素的治疗失败。将批准的药物分子重新用作抗生素可以为对抗危及生命的细菌性疾病提供有效手段。许多药物已被考虑用于针对细菌感染的药物再利用。这些包括,但不限于,Auranofin,Closantel,和托雷米芬已经被重新用于各种感染。此外,管理路线的重新分配,还进行了重新定义剂量方案和重新配制剂型的目的。本章介绍了与针对细菌感染的再利用相关的药物发现和开发过程。
    Repurposing pharmaceuticals is a technique used to find new, alternate clinical applications for approved drug molecules. It may include altering the drug formulation, route of administration, dose or the dosage regimen. The process of repurposing medicines starts with screening libraries of previously approved drugs for the targeted disease condition. If after an the initial in silico, in vitro or in vivo experimentation, the molecule has been found to be active against a particular target, the molecule is considered as a good candidate for clinical trials. As the safety profile of such molecules is available from the previous data, significant time and resources are saved. These advantages of drug repurposing approach make it especially helpful for finding treatments for rapidly evolving conditions including bacterial infections. An ever-increasing incidence of antimicrobial resistance, owing to the mutations in bacterial genome, leads to therapeutic failure of many approved antibiotics. Repurposing the approved drug molecules for use as antibiotics can provide an effective means for the combating life-threatening bacterial diseases. A number of drugs have been considered for drug repurposing against bacterial infections. These include, but are not limited to, Auranofin, Closantel, and Toremifene that have been repurposed for various infections. In addition, the reallocation of route of administration, redefining dosage regimen and reformulation of dosage forms have also been carried out for repurposing purpose. The current chapter addresses the drug discovery and development process with relevance to repurposing against bacterial infections.
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  • 文章类型: Journal Article
    准确识别骨科感染的病因对于正确及时的临床管理非常重要,但是研究很少。在当前的研究中,我们探索了多种细菌病原体与骨科感染的关联。
    住院的骨科患者在青岛的一家乡村医院登记,中国。收集伤口或渗出物拭子样品,并通过培养和多重实时PCR测试十二种细菌病原体。
    共纳入349例骨科住院患者,其中193例入院时出现感染表现,156例无感染迹象。骨科感染患者主要为男性(72.5%),住院时间较长(中位数为15天)。在42.5%(82/193)的感染患者中至少检测到一种病原体,在没有感染的患者中至少检测到一种病原体(P<0.001)。金黄色葡萄球菌是最常见的病原体(15.5%)。观察到数量依赖性病原体与感染的关联,特别是铜绿假单胞菌和肺炎克雷伯菌,可能提示亚临床感染.大多数检测到病原体的患者都有骨科手术史(比值比2.8,P=0.038)。有病原体特异性临床表现。多重qPCR,因为它的高灵敏度,优越的特异性,强大的定量可以与培养结合使用,以指导抗菌治疗并跟踪治疗期间骨科感染的进展。
    UNASSIGNED: Accurate identification of the etiology of orthopedic infection is very important for correct and timely clinical management, but it has been poorly studied. In the current study we explored the association of multiple bacterial pathogens with orthopedic infection.
    UNASSIGNED: Hospitalized orthopedic patients were enrolled in a rural hospital in Qingdao, China. Wound or exudate swab samples were collected and tested for twelve bacterial pathogens with both culture and multiplex real time PCR.
    UNASSIGNED: A total of 349 hospitalized orthopedic patients were enrolled including 193 cases presenting infection manifestations upon admission and 156 with no sign of infection. Orthopedic infection patients were mainly male (72.5%) with more lengthy hospital stay (median 15 days). At least one pathogen was detected in 42.5% (82/193) of patients with infection while 7.1% (11/156) in the patients without infection (P < 0.001). S. aureus was the most prevalent causative pathogen (15.5%). Quantity dependent pathogen association with infection was observed, particularly for P. aeruginosa and K. pneumoniae, possibly indicating subclinical infection. Most of the patients with detected pathogens had a previous history of orthopedic surgery (odds ratio 2.8, P = 0.038). Pathogen specific clinical manifestations were characterized. Multiplex qPCR, because of its high sensitivity, superior specificity, and powerful quantification could be utilized in combination with culture to guide antimicrobial therapy and track the progression of orthopedic infection during treatment.
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  • 文章类型: Case Reports
    背景:结核病(TB),全世界死亡的主要原因之一,在土著人民中发病率较高。尽管不常见,自身免疫性溶血性贫血(AIHA)已被认为是发展分枝杆菌感染的风险条件,作为免疫抑制治疗的结果。TB,反过来,可能是继发感染的诱发因素。
    方法:这里我们介绍一个来自哥伦比亚的28岁土著妇女的案例,先前诊断为AIHA和肺结核。尽管有各种治疗方法,治疗和医疗干预,患者在多种原因导致的严重髓质再生症后死亡,包括免疫抑制治疗的继发性骨髓毒性和继发性播散性感染,金黄色葡萄球菌感染,肺炎克雷伯菌和光滑念珠菌,被鉴定为耐药微生物。一起,这导致了严重的临床并发症.尸检时诊断为侵袭性曲霉病。
    结论:本报告提出了AIHA的罕见发现,其次是TB,并强调了应对共感染的巨大挑战,特别是耐药病原体。它还旨在促使政府和公共卫生当局将注意力集中在预防上,结核病的筛查和管理,特别是在脆弱的社区中,比如土著人。
    BACKGROUND: Tuberculosis (TB), one of the leading causes of death worldwide, has a higher incidence among indigenous people. Albeit uncommon, autoimmune hemolytic anemia (AIHA) has been deemed a risk condition to develop mycobacterial infection, as a result of the immunosuppressive treatments. TB, in turn, can be a predisposing factor for secondary infections.
    METHODS: Here we present a case of a 28-year-old indigenous woman from Colombia, previously diagnosed with AIHA and pulmonary TB. Despite various treatments, therapies and medical interventions, the patient died after severe medullary aplasia of multiple causes, including secondary myelotoxicity by immunosuppressive therapy and secondary disseminated infections, underlining infection by Staphylococcus aureus, Klebsiella pneumoniae and Candida glabrata, which were identified as drug-resistant microorganisms. Together, this led to significant clinical complications. Invasive aspergillosis was diagnosed at autopsy.
    CONCLUSIONS: This report presents a rarely finding of AIHA followed by TB, and highlights the great challenges of dealing with co-infections, particularly by drug resistant pathogens. It also aims to spur governments and public health authorities to focus attention in the prevention, screening and management of TB, especially among vulnerable communities, such as indigenous people.
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  • 文章类型: Journal Article
    2型糖尿病是肝硬化的常见合并症,与肝硬化相关并发症和死亡率独立相关。对ANSWER试验数据库的事后分析评估了在标准药物治疗(SMT)基础上长期使用人白蛋白(HA)对85例肝硬化门诊患者亚组临床结果的影响,无并发症的腹水和胰岛素治疗的2型糖尿病(ITDM)。与SMT手臂的患者相比,SMT+HA组显示出更好的总生存率(86%vs.57%,p=.016)和较低的偶发事件发生率,明显的肝性脑病,细菌感染,肾功能障碍和电解质紊乱。两组的入院人数没有差异,但SMT+HA组住院天数较低.总之,在患有失代偿性肝硬化和腹水的ITDM门诊患者亚组中,长期给予HA与更好的生存率和更低的肝硬化相关并发症发生率相关.
    Type-2 diabetes mellitus is a frequent comorbidity of cirrhosis independently associated with cirrhosis-related complications and mortality. This post hoc analysis of the ANSWER trial database assessed the effects of long-term human albumin (HA) administration on top of the standard medical treatment (SMT) on the clinical outcomes of a subgroup of 85 outpatients with liver cirrhosis, uncomplicated ascites and insulin-treated diabetes mellitus type 2 (ITDM). Compared to patients in the SMT arm, the SMT + HA group showed a better overall survival (86% vs. 57%, p = .016) and lower incidence rates of paracenteses, overt hepatic encephalopathy, bacterial infections, renal dysfunction and electrolyte disorders. Hospital admissions did not differ between the two arms, but the number of days spent in hospital was lower in the SMT + HA group. In conclusion, in a subgroup of ITDM outpatients with decompensated cirrhosis and ascites, long-term HA administration was associated with better survival and a lower incidence of cirrhosis-related complications.
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  • 文章类型: Journal Article
    坏死,最近发现的一种不同于细胞凋亡的细胞程序性死亡形式,已被证实在各种动物模型的细菌感染的发病机理中起重要作用。坏死对宿主有利,但在某些情况下,这可能是有害的。了解坏死性凋亡对细菌感染发病机制的影响,本文就不同细菌感染引起细胞坏死性凋亡的作用及分子机制进行综述。
    Necroptosis, a recently discovered form of cell-programmed death that is distinct from apoptosis, has been confirmed to play a significant role in the pathogenesis of bacterial infections in various animal models. Necroptosis is advantageous to the host, but in some cases, it can be detrimental. To understand the impact of necroptosis on the pathogenesis of bacterial infections, we described the roles and molecular mechanisms of necroptosis caused by different bacterial infections in this review.
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  • 文章类型: Journal Article
    呼吸道感染(RTIs)在全球范围内构成了巨大的健康负担。尤其是在癌症患者等免疫受损群体中。这项前瞻性队列研究的目的是探索癌症患者的下呼吸道感染。我们随访了107例临床或放射学怀疑下呼吸道感染的病例,直至出院或死亡。包括不同年龄段的65名男性和42名女性。临床评估,包括病史,考试,和恶性肿瘤诊断,进行了。鼻咽拭子(NPSs),痰样本,并在症状发作后24小时内收集血液样本。多重实时PCR允许同时检测病毒,细菌,和真菌感染,而常规微生物培养方法用于细菌和真菌分析。使用实时RT-PCR排除所有入选患者的SARS-CoV-2感染。血液学和生化分析包括血红蛋白,淋巴细胞,中性粒细胞,和血小板计数,随着ALT,AST,肌酐,和CRP水平。在临床表现上有显著差异,管理成果,不同血液系统恶性肿瘤患者的预后指标。明确了白血病的临床特征,淋巴瘤和实体瘤,随着年龄分布和症状患病率的变化。ICU入院率差异很大,实体瘤患者的发病率更高。血液和生化生物标志物在恶性肿瘤中有所不同,与淋巴细胞减少症之间的显著关联,血小板减少症,和呼吸发作后的死亡率。这项研究强调了快速病原体检测和感染控制措施在保护易感癌症患者免受医院传播中的关键作用。
    Respiratory tract infections (RTIs) pose a substantial health burden worldwide, especially among immunocompromised groups like cancer patients. The aim of this prospective cohort study was to explore lower respiratory tract infections in cancer patients. We followed 107 cases with clinically or radiologically suspected lower respiratory tract infections until discharge or death, comprising 65 males and 42 females across diverse age groups. Clinical evaluations, including patient history, examination, and malignancy diagnosis, were conducted. Nasopharyngeal swabs (NPSs), sputum samples, and blood samples were collected within 24 h of symptom onset. Multiplex Real-Time PCR allowed for the simultaneous detection of viral, bacterial, and fungal infections, while conventional microbiological culture methods were used for bacterial and fungal analysis. SARS-CoV-2 infection was excluded in all of the enrolled patients using real-time RT-PCR. Hematological and biochemical analyses included hemoglobin, lymphocyte, neutrophil, and platelet counts, along with ALT, AST, creatinine, and CRP levels. Significant differences were noted in clinical presentations, management outcomes, and prognostic markers among patients with different hematological malignancies. Distinct clinical profiles were identified for leukemia, lymphoma, and solid tumors, with variations in age distribution and symptom prevalence. ICU admission rates varied significantly, with solid tumor patients exhibiting higher rates. The hematological and biochemical biomarkers differed across malignancies, with notable associations between lymphopenia, thrombocytopenia, and mortality following respiratory episodes. This study highlights the critical role of rapid pathogen detection and infection control measures in safeguarding vulnerable cancer patients from nosocomial transmission.
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