Lepidoptera

鳞翅目
  • 文章类型: Journal Article
    FibH基因,对昆虫的丝绸纺纱至关重要,编码一种显着影响蚕丝纤维力学的蛋白质。由于其大尺寸和重复序列,有限的已知昆虫FibH序列阻碍了全面的理解。这里,我们分析了来自鳞翅目的114个完整的FibH基因序列(71蛾,24只蝴蝶)和13只毛翅目,揭示大多数物种的单一拷贝FibH,在Hesperinae和Heteropterinae(船长亚科)中具有2-3个拷贝。所有FibH基因的结构有两个外显子和一个内含子(39-45bp),第二个外显子明显更长。与蝴蝶和毛翅目相比,飞蛾在FibH中的GC含量更高。FibH成分因物种而异,飞蛾和蝴蝶喜欢阿拉,Gly,Ser,Pro,Gln,Asn,虽然毛翅目纤维富含Gly,Ser,还有Arg,还有较少的Ala.毛翅目纤维的独特之处在于Tyr,Val,Arg,Trp,而鳞翅目FibH标记为聚Ala(聚丙氨酸),polyser(polyserer),和六肽GAGSGA。系统发育分析表明,鳞翅目由毛翅目进化而来,船长FibH是从Papilionoidea进化而来的。这项研究大大扩展了FibH曲目,为人造丝的发展奠定了基础。
    The FibH gene, crucial for silk spinning in insects, encodes a protein that significantly influences silk fiber mechanics. Due to its large size and repetitive sequences, limited known sequences of insect FibH impede comprehensive understanding. Here, we analyzed 114 complete FibH gene sequences from Lepidoptera (71 moths, 24 butterflies) and 13 Trichoptera, revealing single-copy FibH in most species, with 2-3 copies in Hesperinae and Heteropterinae (subfamily of skippers). All FibH genes are structured with two exons and one intron (39-45 bp), with the second exon being notably longer. Moths exhibit higher GC content in FibH compared to butterflies and Trichoptera. The FibH composition varies among species, with moths and butterflies favoring Ala, Gly, Ser, Pro, Gln, and Asn, while Trichoptera FibH is enriched in Gly, Ser, and Arg, and has less Ala. Unique to Trichoptera FibH are Tyr, Val, Arg, and Trp, whereas Lepidoptera FibH is marked by polyAla (polyalanine), polySer (polyserine), and the hexapeptide GAGSGA. A phylogenetic analysis suggests that Lepidoptera FibH evolved from Trichoptera, with skipper FibH evolving from Papilionoidea. This study substantially expands the FibH repertoire, providing a foundation for the development of artificial silk.
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  • 文章类型: Dataset
    日本粳稻是一种重要的传粉昆虫和农业害虫,具有广泛的寄主植物。高质量的基因组资源促进了对行为生态学的研究,形态和生理适应,和基因组结构的进化。然而,日本T.japonica的染色体水平基因组仍然缺乏。在这里,我们通过结合PacBio长读数来测序和组装T.japonica的高质量基因组,Illumina短读,和Hi-C数据。基因组包含在95个支架中,累积长度为409.55Mb(BUSCO计算的基因组完整性为99.2%)。29个假染色体的总长度为403.77Mb,作图率为98.59%。T.japonica的基因组特征将有助于进一步研究Sphingidae和鳞翅目。
    Theretra japonica is an important pollinator and agricultural pest in the family Sphingidae with a wide range of host plants. High-quality genomic resources facilitate investigations into behavioral ecology, morphological and physiological adaptations, and the evolution of genomic architecture. However, chromosome-level genome of T. japonica is still lacking. Here we sequenced and assembled the high-quality genome of T. japonica by combining PacBio long reads, Illumina short reads, and Hi-C data. The genome was contained in 95 scaffolds with an accumulated length of 409.55 Mb (BUSCO calculated a genome completeness of 99.2%). The 29 pseudochromosomes had a combined length of 403.77 Mb, with a mapping rate of 98.59%. The genomic characterisation of T. japonica will contribute to further studies for Sphingidae and Lepidoptera.
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  • 文章类型: Journal Article
    基因出生-死亡动力学的比较分析有可能揭示在形态学进化中起重要作用的基因家族,行为,或生理变异。这里,我们使用了30种蝴蝶和飞蛾的全基因组来鉴定与专家或通才喂养策略相关的鳞翅目中的基因出生-死亡动态.我们的工作推进了这一领域,使用了一组统一的所有基因组的注释蛋白质,在纠正系统发育的同时调查关联,并评估所有基因家族而不是先验子集。我们发现几个重要的基因家族的大小(例如与农药抗性相关的基因家族,外源性生物解毒,和/或蛋白质消化)与饮食宽度显着相关。我们还发现22个基因家族在蝴蝶(Papilionoidea)冠状节点的基因出生-死亡动力学中显示出显著的变化,其中最值得注意的是一个信息素受体家族,其收缩可能与基于视觉的伴侣识别转变有关。我们的发现强调了统一注释的重要性,系统发育校正,和无偏见的基因家族分析,以生成需要进一步探索的候选基因列表。
    Comparative analyses of gene birth-death dynamics have the potential to reveal gene families that played an important role in the evolution of morphological, behavioral, or physiological variation. Here, we used whole genomes of 30 species of butterflies and moths to identify gene birth-death dynamics among the Lepidoptera that are associated with specialist or generalist feeding strategies. Our work advances this field using a uniform set of annotated proteins for all genomes, investigating associations while correcting for phylogeny, and assessing all gene families rather than a priori subsets. We discovered that the sizes of several important gene families (e.g. those associated with pesticide resistance, xenobiotic detoxification, and/or protein digestion) are significantly correlated with diet breadth. We also found 22 gene families showing significant shifts in gene birth-death dynamics at the butterfly (Papilionoidea) crown node, the most notable of which was a family of pheromone receptors that underwent a contraction potentially linked with a shift to visual-based mate recognition. Our findings highlight the importance of uniform annotations, phylogenetic corrections, and unbiased gene family analyses in generating a list of candidate genes that warrant further exploration.
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  • 文章类型: Journal Article
    我们提出了luna蛾(Actiasluna)的第一个长读从头组装和注释,并提供了重链丝纤蛋白(h-丝纤蛋白)的完整表征-,一个长且高度重复的基因(>20Kbp)在丝纤维生产中必不可少。有超过160,000种被描述的飞蛾和蝴蝶(鳞翅目),但是只有在过去的五年中,我们才开始在捕获h-丝纤蛋白的顺序中恢复高质量的带注释的全基因组。使用PacBioHiFi读取,我们为该物种生产了第一个高质量的长阅读参考基因组。组装后的基因组长度为532Mbp,16.8Mbp的重叠群N50,14个重叠群的L50,和99.4%的完整性(BUSCO)。我们使用Bombyxmori蛋白和A.lunaRNAseq证据的注释以98.9%的完整性捕获了总共20,866个基因,其中有10,267个功能注释的蛋白质和2,679个氨基酸残基的全长h-丝纤蛋白注释。
    We present the first long-read de-novo -assembly and annotation of the luna moth (Actias luna) and provide the full characterization of heavy chain fibroin (h-fibroin)--, a long and highly repetitive gene (>20 Kbp) essential in silk fiber production. There are more than 160,000 described species of moths and butterflies (Lepidoptera), but only within the last five years have we begun to recover high-quality annotated whole genomes across the order which capture h-fibroin. Using PacBio HiFi reads, we produce the first high-quality long-read reference genome for this species. The assembled genome has a length of 532 Mbp, a contig N50 of 16.8 Mbp, an L50 of 14 contigs, and 99.4% completeness (BUSCO). Our annotation using Bombyx mori protein and A.luna RNAseq evidence captured a total of 20,866 genes at 98.9% completeness with 10,267 functionally annotated proteins and a full-length h-fibroin annotation of 2,679 amino acid residues.
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  • 文章类型: Journal Article
    粉红棉铃虫(PBW)是世界范围内的重要害虫。有多种因素决定了棉菌在世界不同棉花种植区的发生和分布。其中一个关键因素是“温度”。目的是分析PBW在不同温度条件下的生活史特征。我们系统地探索了在五个不同温度下P.gossypiella的生物学和人口统计学参数;20、25、30、35和40±1°C,保持LD16:8h的光周期。结果表明,随着温度的升高,PBW的总发育期缩短,在30°C至35°C之间观察到最高的幼虫存活率,达到86.66%和80.67%,分别。此外,观察到显著的影响,因为p的重量,交配成功的百分比,和繁殖力在30°C和35°C时显示出更高的值。相反,卵孵化百分比,幼虫存活,在20°C和40°C时,成虫的出苗明显较低,分别。成年寿命随着温度的升高而降低,在所有治疗中,女性的寿命都比男性高。值得注意的是,热应力对F1代产生持续影响,显着影响未成熟阶段(卵和幼虫),而对生殖潜力的影响很小。这些发现为在田间水平上预测棉菌的种群动态和制定棉花的气候适应管理策略提供了有价值的见解。
    Pink bollworm (PBW) Pectinophora gossypiella is an important pest cotton worldwide. There are multiple factors which determines the occurrence and distribution of P. gossypiella across different cotton growing regions of the world, and one such key factor is \'temperature\'. The aim was to analyze the life history traits of PBW across varying temperature conditions. We systematically explored the biological and demographic parameters of P. gossypiella at five distinct temperatures; 20, 25, 30, 35 and 40 ± 1 °C maintaining a photoperiod of LD 16:8 h. The results revealed that the total developmental period of PBW shortens with rising temperatures, and the highest larval survival rates were observed between 30 °C and 35 °C, reaching 86.66% and 80.67%, respectively. Moreover, significant impacts were observed as the pupal weight, percent mating success, and fecundity exhibited higher values at 30 °C and 35 °C. Conversely, percent egg hatching, larval survival, and adult emergence were notably lower at 20 °C and 40 °C, respectively. Adult longevity decreased with rising temperatures, with females outliving males across all treatments. Notably, thermal stress had a persistent effect on the F1 generation, significantly affecting immature stages (egg and larvae), while its impact on reproductive potential was minimal. These findings offer valuable insights for predicting the population dynamics of P. gossypiella at the field level and developing climate-resilient management strategies in cotton.
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  • 文章类型: Journal Article
    转录组数据已用于研究大约10个鳞翅目ZW物种的性染色体剂量补偿(SCDC),产生Z≈ZZ Transcriptomic data have been used to study sex chromosome dosage compensation (SCDC) in approximately 10 Lepidoptera ZW species, yielding a consensus compensation pattern of Z ≈ ZZ < AA . $$ \\approx \\mathrm{ZZ}<\\mathrm{AA}. $$ It remains unclear whether this compensation pattern holds when examining more Lepidoptera ZW species and/or using proteomic data to analyse SCDC. Here we combined transcriptomic and proteomic data as well as transcriptional level of six individual Z genes to reveal the SCDC pattern in Helicoverpa armigera, a polyphagous lepidopteran pest of economic importance. Transcriptomic analysis showed that the Z chromosome expression of H. armigera was balanced between male and female but substantially reduced relative to autosome expression, exhibiting an SCDC pattern of Z ≈ ZZ < AA $$ \\approx \\mathrm{ZZ}<\\mathrm{AA} $$ . When using H. amigera midgut proteomic data, the SCDC pattern of this species changed from Z ≈ ZZ < AA $$ \\approx \\mathrm{ZZ}<\\mathrm{AA} $$ at transcriptomic level to Z = ZZ = AA at the proteomic level. RT-qPCR analysis of transcript abundance of six Z genes found that compensation for each Z gene could vary from no compensation to overcompensation, depending on the individual genes and tissues tested. These results demonstrate for the first time the existence of a translational compensation mechanism, which is operating in addition to a translational mechanism, such as has been reported in other lepidopteran species. And the transcriptional compensation mechanism functions to accomplish Z chromosome dosage balance between the sexes (M = F on the Z chromosome), whereas the translation compensation mechanism operates to achieve dosage compensation between Z chromosome and autosome (Z = AA).
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  • 文章类型: Journal Article
    近年来,肺炎克雷伯菌(KP)致病型的趋同性报道越来越多。这些病原体结合了多重耐药和高毒力KP的特征。然而,临床使用的高毒力KP鉴定指标,例如高粘膜粘度,似乎在收敛的KP中差异表达,潜在的爆发克隆很难识别。我们旨在通过研究在克隆爆发期间分离出的属于高风险序列类型(ST)307的会聚KP菌株中高粘膜粘度和毒力的温度依赖性来填补这些知识空白。
    高粘膜粘度,生物膜的形成,和死亡率在不同温度下检查了Galleriamelonella幼虫(室温,28°C,37°C,40°C和42°C)以及包括电子显微镜在内的各种表型实验。通过qPCR分析探索表型变化的潜在机制,以评估质粒拷贝数,和转录组学。
    我们的结果表明,高于37°C的温度依赖性转变为高粘膜粘性表型,与增加的生物膜形成和体内死亡率一致,可能反映了细菌对发热样疾病的反应。此外,我们观察到含有碳青霉烯酶和rmpA基因的杂交质粒的质粒拷贝数增加。然而,转录组学分析显示在较高温度下rmpA表达没有变化,建议替代调节途径。
    这项研究不仅阐明了高温对会聚KP中的高粘膜粘度和毒力的影响,而且还阐明了其适应行为的先前未被认识到的方面,强调其对不断变化的环境的适应能力。
    UNASSIGNED: Convergence of Klebsiella pneumoniae (KP) pathotypes has been increasingly reported in recent years. These pathogens combine features of both multidrug-resistant and hypervirulent KP. However, clinically used indicators for hypervirulent KP identification, such as hypermucoviscosity, appear to be differentially expressed in convergent KP, potential outbreak clones are difficult to identify. We aimed to fill such knowledge gaps by investigating the temperature dependence of hypermucoviscosity and virulence in a convergent KP strain isolated during a clonal outbreak and belonging to the high-risk sequence type (ST)307.
    UNASSIGNED: Hypermucoviscosity, biofilm formation, and mortality rates in Galleria mellonella larvae were examined at different temperatures (room temperature, 28°C, 37°C, 40°C and 42°C) and with various phenotypic experiments including electron microscopy. The underlying mechanisms of the phenotypic changes were explored via qPCR analysis to evaluate plasmid copy numbers, and transcriptomics.
    UNASSIGNED: Our results show a temperature-dependent switch above 37°C towards a hypermucoviscous phenotype, consistent with increased biofilm formation and in vivo mortality, possibly reflecting a bacterial response to fever-like conditions. Furthermore, we observed an increase in plasmid copy number for a hybrid plasmid harboring carbapenemase and rmpA genes. However, transcriptomic analysis revealed no changes in rmpA expression at higher temperatures, suggesting alternative regulatory pathways.
    UNASSIGNED: This study not only elucidates the impact of elevated temperatures on hypermucoviscosity and virulence in convergent KP but also sheds light on previously unrecognized aspects of its adaptive behavior, underscoring its resilience to changing environments.
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  • 文章类型: Journal Article
    蛾的幼虫具有形态上不同的层。我们研究了这些茧的单个丝蛋白成分的表达与丝腺的形态及其与茧不同层的隶属关系。该研究使用转录组学和蛋白质组学分析来鉴定与丝茧相关的91种蛋白质,其中63个具有指示其分泌性质的信号肽。我们检查了它们在SG的不同部分中表达的特异性以及每个茧层中相应蛋白质产物的存在。在功能不清楚的较少丰富的蛋白质之间观察到差异。蛋白质在内包膜和中间空间的表示是相似的,除了可能的污染蛋白质比例更高,主要来自肠道。另一方面,外包膜含有一些功能不明确的推定酶。然而,对外层最特异的蛋白质与推定的丝氨酸/苏氨酸激酶样蛋白和一些粘附蛋白具有序列同源性,它在家蚕最接近的同系物是在脚手架丝上发现的。这项研究提供了有价值的见解的蚕丝生产的小蛾,突出与其他蛾种的异同。
    The larvae of the moth Hyalophora cecropia spin silk cocoons with morphologically distinct layers. We investigated the expression of the individual silk protein components of these cocoons in relation to the morphology of the silk gland and its affiliation to the different layers of the cocoon. The study used transcriptomic and proteomic analyses to identify 91 proteins associated with the silk cocoons, 63 of which have a signal peptide indicating their secretory nature. We checked the specificity of their expression in different parts of the SG and the presence of the corresponding protein products in each cocoon layer. Differences were observed among less abundant proteins with unclear functions. The representation of proteins in the inner envelope and intermediate space was similar, except for a higher proportion of probable contaminating proteins, mostly originating from the gut. On the other hand, the outer envelope contains a number of putative enzymes with unclear function. However, the protein most specific to the outer layer has sequence homology to putative serine/threonine kinase-like proteins and some adhesive proteins, and its closest homolog in Bombyx mori was found in the scaffold silk. This research provides valuable insights into the silk production of the cecropia moth, highlighting both similarities and differences to other moth species.
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  • 文章类型: Journal Article
    为了探测它的环境,飞行昆虫可控地弯曲,曲折,并通过将机械变形与感官输出耦合来操纵其触角。我们质疑昆虫触角的材料特性如何影响其性能。对四种鹰蛾物种进行了比较研究:Manducasexta,CatalpaeCeratomia,曼杜卡五号库拉塔,和Xylophanestersa。在取食时盘旋的三个鹰蛾的触角形态和一个假定为非花蜜的鹰蛾(Ceratomiacatalpa)没有根本区别,并且所有的天线都是梳状的(即,果胶),在男性中明显,但在女性中较弱。对提取的悬臂天线的自由端施加不同的重量,当天线被迫向背侧和腹侧弯曲时,我们发现了弯曲刚度的各向异性。男性触角的弯曲刚度小于女性。与喂食时盘旋的鹰蛾相比,Catalpae的弯曲刚度降低了几乎两个数量级。拉伸测试表明,雄性和雌性触角的刚度几乎相同。因此,弯曲刚度的差异可以通过触角果胶的不同形状来解释。像梳子里的刷毛,这种弯曲为天线提供了额外的刚度。我们讨论了这些发现与鹰蛾的飞行习惯有关的生物学意义。在其他昆虫群体中,天线的弯曲各向异性是预期的,但目标结果可能有所不同。我们的工作为成形纤维作为机械传感器提供了有希望的新应用。重要声明:昆虫触角充满血液,在两个基底段有肌肉的分段纤维。长末端节段无肌肉,但可以弯曲。我们对鹰蛾天线的机械性能的比较分析揭示了一个新特征:天线对弯曲的抵抗力取决于弯曲方向。我们的发现取代了传统的教科书场景,将鹰蛾触角视为刚性杆。我们表明,鹰蛾的梳状触角表现为梳子,刷毛在一起时会抵抗弯曲。弯曲阻力的这种各向异性提供了一种从未探索过的新的环境传感模式。我们发现的原理适用于其他具有非轴对称触角的昆虫。我们的工作为可以设计用于感测流动的成形纤维提供了新的应用。
    To probe its environment, the flying insect controllably flexes, twists, and maneuvers its antennae by coupling mechanical deformations with the sensory output. We question how the materials properties of insect antennae could influence their performance. A comparative study was conducted on four hawkmoth species: Manduca sexta, Ceratomia catalpae, Manduca quinquemaculata, and Xylophanes tersa. The morphology of the antennae of three hawkmoths that hover while feeding and one putatively non-nectar-feeding hawkmoth (Ceratomia catalpa) do not fundamentally differ, and all the antennae are comb-like (i.e., pectinate), markedly in males but weakly in females. Applying different weights to the free end of extracted cantilevered antennae, we discovered anisotropy in flexural rigidity when the antenna is forced to bend dorsally versus ventrally. The flexural rigidity of male antennae was less than that of females. Compared with the hawkmoths that hover while feeding, Ceratomia catalpae has almost two orders of magnitude lower flexural rigidity. Tensile tests showed that the stiffness of male and female antennae is almost the same. Therefore, the differences in flexural rigidity are explained by the distinct shapes of the antennal pectination. Like bristles in a comb, the pectinations provide extra rigidity to the antenna. We discuss the biological implications of these discoveries in relation to the flight habits of hawkmoths. Flexural anisotropy of antennae is expected in other groups of insects, but the targeted outcome may differ. Our work offers promising new applications of shaped fibers as mechanical sensors. STATEMENT OF SIGNIFICANCE: Insect antennae are blood-filled, segmented fibers with muscles in the two basal segments. The long terminal segment is muscle-free but can be flexed. Our comparative analysis of mechanical properties of hawkmoth antennae revealed a new feature: antenna resistance to bending depends on the bending direction. Our discovery replaces the conventional textbook scenario considering hawkmoth antennae as rigid rods. We showed that the pectinate antennae of hawkmoths behave as a comb in which the bristles resist bending when they come together. This anisotropy of flexural resistance offers a new mode of environmental sensing that has never been explored. The principles we found apply to other insects with non-axisymmetric antennae. Our work offers new applications for shaped fibers that could be designed to sense the flows.
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  • 文章类型: Journal Article
    先前的研究已经在家蚕的昆虫细胞培养物中建立了抗凋亡作用(B.mori)血淋巴,以及在补充了这种血淋巴的培养基中培养的昆虫细胞中,杆状病毒载体促进了重组蛋白的产量提高。在这项研究中,我们调查了另一种鳞翅目的血淋巴,Trichopulsiani(T.ni),并且在补充有这种天然物质的培养基中培养的昆虫细胞中观察到类似的有益效果。我们观察到产量(大约1.5倍高)和感染后晚期细胞活力(30-40%高)的增强。来自B.mori(SP2Bm)的储存蛋白2先前已被鉴定为丰富的血淋巴蛋白之一,可能负责使用补充了B.mori血淋巴的细胞培养基后观察到的有益作用。通过使用双杆状病毒载体,将SP2Bm蛋白与GFP蛋白共表达,与仅表达GFP的杆状病毒载体相比,我们实现了报告蛋白产量的三倍增加。这项研究强调了来自各种鳞翅目物种的血淋巴蛋白作为增加杆状病毒载体生产力的生物技术工具的潜力。无论是用作细胞培养基中的天然补充剂还是用作由杆状病毒载体共表达的血淋巴来源的重组蛋白。
    Prior research has established the anti-apoptotic effects in insect cell cultures of Bombyx mori (B. mori) hemolymph, as well as the heightened production yields of recombinant proteins facilitated by baculovirus vectors in insect cells cultivated in media supplemented with this hemolymph. In this study, we investigated the hemolymph of another Lepidoptera species, Trichoplusia ni (T. ni), and observed similar beneficial effects in insect cells cultivated in media supplemented with this natural substance. We observed enhancements in both production yield (approximately 1.5 times higher) and late-stage cell viabilities post-infection (30-40% higher). Storage-protein 2 from B. mori (SP2Bm) has previously been identified as one of the abundant hemolymph proteins potentially responsible for the beneficial effects observed after the use of B. mori hemolymph-supplemented cell culture media. By employing a dual baculovirus vector that co-expresses the SP2Bm protein alongside the GFP protein, we achieved a threefold increase in reporter protein production compared to a baculovirus vector expressing GFP alone. This study underscores the potential of hemolymph proteins sourced from various Lepidoptera species as biotechnological tools to augment baculovirus vector productivities, whether utilized as natural supplements in cell culture media or as hemolymph-derived recombinant proteins co-expressed by baculovirus vectors.
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