Heritability

遗传力
  • 文章类型: Journal Article
    干豆(PhaseolusvulgarisL.)是一种在世界范围内广泛具有高营养兴趣的作物。这项研究有两个目标。一方面,开发和验证了一种基于一步提取和衍生化以及随后通过气相色谱法定量的干豆中脂肪酸的分析方法。另一方面,它用于表征由172个品系组成的多样性面板中的脂肪酸含量。该方法在准确性方面得到了成功验证,精度和鲁棒性。在构成干豆脂肪酸谱的14种脂肪酸中,最重要的定量是亚麻酸,所有情况下的主要脂肪酸,平均值为6.7mg/g,其次是亚油酸(3.9毫克/克),棕榈酸(2.9mg/g)和油酸(1.5mg/g)。干豆中脂肪酸的浓度受基因库的影响,中美洲基因库显示出更高的棕榈酸含量,硬脂酸,亚油酸和亚麻酸以及安第斯基因库具有较高水平的顺式疫苗酸。此外,表达脂肪酸含量具有较高的遗传力。生成的信息构成了对食品技术感兴趣的强大数据库,营养和育种计划。
    Dry bean (Phaseolus vulgaris L.) is a crop of high nutritional interest widespread throughout the world. This research had two objectives. On the one hand, the development and validation of an analytical method to quantify fatty acids in dry beans based on the extraction and derivatization in a single step and later quantification by gas chromatography. On the other, its application to characterize the fatty acid content in a diversity panel consisting of 172 lines. The method was successfully validated in terms of accuracy, precision and robustness. Among the 14 fatty acids that constitute the fatty acid profile of dry bean, the most quantitatively important were linolenic acid, the major fatty acid in all cases, with an average value of 6.7 mg/g, followed by linoleic acid (3.9 mg/g), palmitic acid (2.9 mg/g) and oleic acid (1.5 mg/g). The concentrations of fatty acids in dry bean were influenced by the gene pool, with the Mesoamerican gene pool showing a higher content of palmitic, stearic, linoleic and linolenic acids and the Andean gene pool a higher level of cis-vaccenic acid. Also, the expression of fatty acid content showed high heritability. The information generated constitutes a robust database of interest in food technology, nutrition and breeding programs.
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  • 文章类型: Journal Article
    这项研究的目的是分析合适的遗传模型和选择指数,以估计泰国本地公鸡的遗传参数和育种值。共有3475个精液性状的记录(群众运动,精液pH值,精液颜色,volume,精子活力,精子异常,和精子浓度)分析了242只泰国本地祖父母公鸡。使用具有五个协方差函数的多性状随机回归测试日模型来分析方差分量,遗传参数,和育种价值。计算选择指数(SI)以确定不同选择百分比的最佳遗传值。结果表明,具有二阶Legendre多项式函数的多性状随机回归测试日模型是最适合该种群的遗传模型。估计的遗传力值是低到中等,范围从0.110到0.112(质量运动),0.040至0.051(精液pH),0.092至0.097(精液颜色),0.220至0.225(精液体积),0.067至0.083(精子活力),0.086至0.099(精子异常),和0.134至0.138(精子浓度)。重复性值超过遗传力值,在0.133~0.688范围内。精液性状之间的遗传相关性在-0.332至0.677之间,表型相关性在-0.260至0.460之间。当考虑遗传力和遗传相关值时,精液体积,精子浓度,和群众运动是作为选择指数计算的三大优先精液性状。最后,推荐选择索引的前10%用于创建下一代。我们的发现提供了有关遗传参数的有用信息以及精液性状的适当选择指数,可用于选择泰国本地祖母鸡的遗传。此处报道的精液性状的遗传力估计表明,通过遗传评估方法对选择有足够的反应。我们的结果表明,有可能选择具有更好繁殖性能的祖父母公鸡。
    The aim of this study was to analyze suitable genetic models and selection indices to estimate the genetic parameters and breeding values of native Thai roosters. A total of 3475 records of seven semen traits (mass movement, semen pH, semen color, volume, sperm viability, sperm abnormalities, and sperm concentration) from 242 Thai native grandparent roosters were analyzed. Multiple-trait random regression test-day models with five covariance functions were used to analyze the variance components, genetic parameters, and breeding values. The selection index (SI) was calculated to determine the optimal genetic value for different selection percentages. The results showed that a multiple-trait random regression test-day model with a second-order Legendre polynomial function was the most appropriate genetic model for this population. The estimated heritability values were low to moderate, ranging from 0.110 to 0.112 (mass movement), 0.040 to 0.051 (semen pH), 0.092 to 0.097 (semen color), 0.220 to 0.225 (semen volume), 0.067 to 0.083 (sperm viability), 0.086 to 0.099 (sperm abnormalities), and 0.134 to 0.138 (sperm concentration). The repeatability values exceeded the heritability values and were within the range of 0.133 to 0.688. The genetic correlations among semen traits ranged from -0.332 to 0.677, and phenotypic correlations ranged from -0.260 to 0.460. When considering heritability and genetic correlation values, semen volume, sperm concentration, and mass movement were the top three priority semen traits calculated as selection indices. Finally, the top 10% of the selection index was recommended for creating the next generation. Our findings provide useful information on genetic parameters and an appropriate selection index of semen traits for selecting the genetics of individual Thai native grandparent roosters. The heritability estimates for semen traits reported here suggest an adequate response to selection through a genetic evaluation approach. Our results indicate that it is possible to select grandparent roosters with better reproductive performance.
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  • 文章类型: Journal Article
    Mithun(Bosfrontalis),一个国内饲养的食草动物,对印度东北部的农业社区具有重要的经济意义。这项研究旨在使用来自印度唯一有组织的半密集型Mithun农场的数据,阐明控制不同年龄Mithun体重特征的遗传参数。信息是从2011年至2022年出生的110名Mithuns收集的。第1周的体重(W1),1个月(M1),3个月(M3),6个月(M6),9个月(M9),12个月(M12),研究考虑30个月(M30)和45个月(M45)。遗传参数估计采用BLUPF90程序套件,纳入具有固定效应的单变量吉布斯采样器动物模型;出生季节和时期,和动物的性别。方差和协方差分量,包括直接加性遗传效应,估计。八个体重性状的遗传力估计范围为0.47±0.0050至0.50±0.0043,表明整个生长阶段的遗传影响不同。结果表明,Mithun牧群的生长性状具有相当大的遗传变异性,因此有足够的余地选择更好的生长速率。这里,我们得出结论,第12个月(M12)和第9个月(M9)体重表现出更高的遗传力,表明通过选择性育种进行遗传改良的潜力。
    Mithun (Bos frontalis), a domestically raised herbivore, holds significant economic importance for the farming community of Northeast India. This study aimed to elucidate the genetic parameters governing Mithun body weight traits across different ages using data from the sole organized semi-intensive Mithun farm in India. Information was gathered from 110 Mithuns born over a period spanning from 2011 to 2022. Body weight taken at week 1 (W1), 1-month (M1), 3-months (M3), 6-months (M6), 9-months (M9), 12-months (M12), 30-months (M30) and 45-months (M45) were considered for the study. The genetic parameters estimation employed the BLUPF90 suite of programs, incorporating univariate Gibbs sampler animal model with fixed effects; season and period of birth, and sex of the animal. Variance and covariance components, including direct additive genetic effects, were estimated. Heritability estimates for the eight body weight traits ranged from 0.47 ± 0.0050 to 0.50 ± 0.0043, indicating varying genetic influence across growth stages. Results revealed that Mithun herd has a substantial genetic variability for growth traits and therefore there is ample scope to select for a better growth rate. Here, we conclude that Month 12 (M12) and Month 9 (M9) body weights exhibit higher heritability, indicating potential for genetic improvement through selective breeding.
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  • 文章类型: Journal Article
    生活中的成功与执行功能有关,支持目标导向行为的认知过程的集合。执行功能是与认知控制相关的总称,自我控制,还有更多.执行功能的变化预测了学校教育的并发成功,关系,和行为,以及几年后重要的生活结果。这些发现可能表明,某些人注定要拥有良好的执行功能和成功。然而,环境对执行功能和发展的影响早已得到认可。这一传统的最新研究表明,社会背景影响儿童参与执行功能的力量。这些发现提出了新的解释,为什么个人在执行功能和相关的生活结果方面存在差异,包括跨文化和社会经济地位。这些发现提出了关于如何最好地概念化的基本问题,measure,并支持不同背景下的执行功能。解决现实世界动态和计算机制的未来研究将阐明执行功能如何在世界上出现。
    Success in life is linked to executive functions, a collection of cognitive processes that support goal-directed behaviors. Executive functions is an umbrella term related to cognitive control, self-control, and more. Variations in executive functioning predict concurrent success in schooling, relationships, and behavior, as well as important life outcomes years later. Such findings may suggest that certain individuals are destined for good executive functioning and success. However, environmental influences on executive function and development have long been recognized. Recent research in this tradition demonstrates the power of social contextual influences on children\'s engagement of executive functions. Such findings suggest new interpretations of why individuals differ in executive functioning and associated life outcomes, including across cultures and socioeconomic statuses. These findings raise fundamental questions about how best to conceptualize, measure, and support executive functioning across diverse contexts. Future research addressing real-world dynamics and computational mechanisms will elucidate how executive functioning emerges in the world.
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  • 文章类型: Journal Article
    背景:表观遗传时钟被认为是衰老的有希望的生物标志物,包括由各个CpG站点训练的原始时钟和由CpG站点的PC训练的主成分(PC)时钟。遗传和环境因素对表观遗传时钟的影响尚不清楚。特别是PC时钟。
    方法:我们从中国国家双胞胎注册中心(CNTR)中构建了477对同性双胞胎的单变量双胞胎模型,以估计五个表观遗传钟(GrimAge,PhenoAge,DunedinPACE,PCGrimAge,和PCPhenoAge)。此外,我们调查了134对同性双胞胎5年中遗传和环境影响对表观遗传时钟的纵向变化。
    结果:表观遗传时钟的遗传力范围为0.45至0.70,PC时钟的遗传力高于原始时钟。对于五个表观遗传时钟,纵向稳定性中等到高,主要是由于遗传效应。基线和后续表观遗传时钟之间的遗传相关性中等到高。在基线和后续行动中都出现了特殊的独特环境因素。PC时钟比原始时钟显示出更高的纵向稳定性和独特的环境相关性。
    结论:对于五个表观遗传时钟,他们有可能识别衰老干预措施。高纵向稳定性主要是由于遗传因素,表观遗传时钟随时间的变化主要是由于独特环境因素的变化。考虑到遗传和环境因素的差异以及PC和原始时钟之间的纵向稳定性,原始时钟的研究结果需要用PC时钟进一步验证。
    BACKGROUND: Epigenetic clocks were known as promising biomarkers of aging, including original clocks trained by individual CpG sites and principal component (PC) clocks trained by PCs of CpG sites. The effects of genetic and environmental factors on epigenetic clocks are still unclear, especially for PC clocks.
    METHODS: We constructed univariate twin models in 477 same-sex twin pairs from the Chinese National Twin Registry (CNTR) to estimate the heritability of five epigenetic clocks (GrimAge, PhenoAge, DunedinPACE, PCGrimAge, and PCPhenoAge). Besides, we investigated the longitudinal changes of genetic and environmental influences on epigenetic clocks across 5 years in 134 same-sex twin pairs.
    RESULTS: Heritability of epigenetic clocks ranged from 0.45 to 0.70, and those for PC clocks were higher than those for original clocks. For five epigenetic clocks, the longitudinal stability was moderate to high and was largely due to genetic effects. The genetic correlations between baseline and follow-up epigenetic clocks were moderate to high. Special unique environmental factors emerged both at baseline and at follow-up. PC clocks showed higher longitudinal stability and unique environmental correlations than original clocks.
    CONCLUSIONS: For five epigenetic clocks, they have the potential to identify aging interventions. High longitudinal stability is mainly due to genetic factors, and changes of epigenetic clocks over time are primarily due to changes in unique environmental factors. Given the disparities in genetic and environmental factors as well as longitudinal stability between PC and original clocks, the results of studies with original clocks need to be further verified with PC clocks.
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  • 文章类型: Journal Article
    颅内体积(ICV)反映了最大的大脑发育,并与以后的认知能力有关。我们从拉丁裔研究中量化了第一代和第二代西班牙裔和拉丁裔成年人的ICV-认知老化调查-MRI(SOL-INCA-MRI),估计ICV遗传力,并测试了其与先前报道的遗传变异的关联,无论是单独还是作为遗传风险评分(GRS)。我们还估计了ICV与早期生活环境措施的关联:出生或移民年龄和父母教育。在n=1781例无关的SOL-INCA-MRI个体中,ICV的估计遗传率为19%(95%CI,0.1%-56%)。10个测试的遗传变异中有4个与ICV相关,ICV-GRS增加1SD与ICV增加10.37cm3相关(95%CI,5.29-15.45)。与出生在美国大陆相比,11岁或以上移民美国的ICV较小24cm3(95%CI,-39.97~-8.06).与父母都没有受过高中教育相比,至少有1名父母完成高中教育后,ICV增加15.4cm3(95%CI,4.46~26.39).这些数据证实了早期生命健康对大脑发育的重要性。
    Intracranial volume (ICV) reflects maximal brain development and is associated with later-life cognitive abilities. We quantified ICV among first- and second-generation Hispanic and Latino adults from the Study of Latinos-Investigation of Cognitive Aging - MRI (SOL-INCA-MRI), estimated ICV heritability, and tested its associations with previously reported genetic variants, both individually and as a genetic risk score (GRS). We also estimated the association of ICV with early life environmental measures: nativity or age of immigration and parental education. The estimated heritability of ICV was 19% (95% CI, 0.1%-56%) in n=1781 unrelated SOL-INCA-MRI individuals. Four of 10 tested genetic variants were associated with ICV and an increase of 1 SD of the ICV-GRS was associated with an increase of 10.37 cm3 in the ICV (95% CI, 5.29-15.45). Compared to being born in the continental United States, immigrating to the United States at age 11 years or older was associated with 24 cm3 smaller ICV (95% CI, -39.97 to -8.06). Compared to both parents having less than high-school education, at least 1 parent completing high-school education was associated with 15.4 cm3 greater ICV (95% CI, 4.46-26.39). These data confirm the importance of early life health on brain development.
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  • 文章类型: Journal Article
    骨关节炎(OA)是关节炎的最常见形式,具有公认的多因素性质。虽然一些环境因素,如年龄,肥胖和以前的关节损伤与其发展密切相关,遗传对OA的影响已经被认识了80多年。在过去的二十年中,与OA相关的基因的鉴定受到了相当大的关注,借助快速发展的基因分型和测序技术。已鉴定超过300个基因组基因座与不同关节处的OA相关。这些发现可能有助于我们更好地了解OA的发病机理,并导致这种最常见的致残性风湿性疾病的重要治疗和诊断进展。本文将回顾支持遗传因素在常见特发性OA中的作用的数据。
    Osteoarthritis (OA) is the most common form of arthritis with well recognized multifactorial nature. While several environmental factors such as older age, obesity and previous joint injury are strongly associated with its development, a genetic influence on OA has been recognized for over 80 years. Identification of genes associated with OA has received considerable attention over the last two decades, aided by the rapidly evolving genotyping and sequencing technologies. More than 300 genomic loci have been identified to be associated with OA at different joints. These findings are likely to help our better understanding of the pathogenesis of OA and lead to important therapeutic and diagnostic advances in this most common disabling rheumatic disorder. This article will review the data that support the role of genetic factors in common idiopathic OA.
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  • 文章类型: Journal Article
    表型可塑性和快速进化是生物体在面对环境变化时保持其功能和适应性的基本过程。在这里,我们量化了高山草本植物Wahlenbergiaceracea的可塑性和进化潜力。利用它的混合交配系统,我们产生了异类和自花授粉的家庭,这些家庭在凉爽或温暖的环境中生长,父母也在凉爽或温暖的环境中长大。然后,我们分析了环境和遗传因素对一系列表型性状变异的贡献,包括物候,单位面积的叶片质量,光合功能,耐热性,和生殖健康。最强的影响是当前的生长温度,表明表型可塑性强。除耐热性外,所有性状均为塑性,温暖生长的植物更早开花,越来越大,与冷生长的植物相比,产生了更多的生殖茎。开花开始和生物量是可遗传的,并且正在选择中,开花早,较大的植物具有较高的相对适应性。几乎没有跨代可塑性的证据,产妇的影响,或基因型与环境的相互作用。近交延迟开花并降低生殖适应性和生物量。总的来说,我们发现W.ceracea具有通过可塑性对气候变暖做出快速反应的能力,以及进化变化的潜力。
    Phenotypic plasticity and rapid evolution are fundamental processes by which organisms can maintain their function and fitness in the face of environmental changes. Here we quantified the plasticity and evolutionary potential of an alpine herb Wahlenbergia ceracea. Utilising its mixed-mating system, we generated outcrossed and self-pollinated families that were grown in either cool or warm environments, and that had parents that had also been grown in either cool or warm environments. We then analysed the contribution of environmental and genetic factors to variation in a range of phenotypic traits including phenology, leaf mass per area, photosynthetic function, thermal tolerance, and reproductive fitness. The strongest effect was that of current growth temperature, indicating strong phenotypic plasticity. All traits except thermal tolerance were plastic, whereby warm-grown plants flowered earlier, grew larger, produced more reproductive stems compared to cool-grown plants. Flowering onset and biomass were heritable and under selection, with early flowering and larger plants having higher relative fitness. There was little evidence for transgenerational plasticity, maternal effects, or genotype-by-environment interactions. Inbreeding delayed flowering and reduced reproductive fitness and biomass. Overall, we found that W. ceracea has the capacity to respond rapidly to climate warming via plasticity, and the potential for evolutionary change.
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  • 文章类型: Journal Article
    越来越多的证据表明,有能力处理特定物种之间的社交互动会对个人适应性产生积极影响。虽然社会能力的个体差异得到了重视,长期经验在获得卓越社交技能方面的作用受到的关注较少。以推动深入研究为目标,我们整合跨学科的知识来评估社会专业知识,定义为特征,技能和知识,使具有丰富社会经验的个人在特定社会任务上的表现明显优于新手。我们关注三类社会行为。首先,动物可以从调整社会行为中受益,以适应他们定期与之互动的个人认可的物种。例如,有证据表明,一些领土动物单独识别他们的邻居,并根据与每个邻居的经验改变他们的社会互动。同样,群体生活物种中的个体根据他们从这种社会关系中获得的预期收益,学会与特定群体成员建立联系。还发现个人花费大量时间和精力来了解异性邻居的性接受的空间位置和时间,以优化生殖。第二,信号器可以增强他们的信号,接收器可以根据经验改进对信号的响应。在许多鸟类和昆虫中,个人可以通过经验产生更一致的信号,并且在广泛的分类学范围内的雌性可以在感知到不同的雄性信号后自适应地调整交配偏好。第三,在许多物种中,成功复制的人遇到了小说,照顾脆弱后代的复杂任务。来自一些哺乳动物物种的证据表明,母亲在提供和保护其后代方面有所改善。最后,为了社会专业知识的发展,社会专业知识的遗传差异必须与健身呈正相关。遗传变异已显示在有助于社会专业知识的特征中,包括社会关注,同理心,个人认可和产妇护理。目前,将社会专业知识与健身联系起来的数据有限,最有可能是由于研究工作稀疏。例外情况包括产妇护理,信号细化,熟悉邻居和小组成员。总的来说,有证据表明,许多物种的个体都在一生中不断用经验来提高他们的社交技能。因此,我们提出了有希望的研究路线,可以更彻底地量化社会专业知识的发展及其对健身的影响。
    There is increasing evidence that competent handling of social interactions among conspecifics has positive effects on individual fitness. While individual variation in social competence has been appreciated, the role of long-term experience in the acquisition of superior social skills has received less attention. With the goal of promoting further research, we integrate knowledge across disciplines to assess social expertise, defined as the characteristics, skills and knowledge allowing individuals with extensive social experience to perform significantly better than novices on a given social task. We focus on three categories of social behaviour. First, animals can gain from adjusting social behaviour towards individually recognised conspecifics that they interact with on a regular basis. For example, there is evidence that some territorial animals individually recognise their neighbours and modify their social interactions based on experience with each neighbour. Similarly, individuals in group-living species learn to associate with specific group members based on their expected benefits from such social connections. Individuals have also been found to devote considerable time and effort to learning about the spatial location and timing of sexual receptivity of opposite-sex neighbours to optimise reproduction. Second, signallers can enhance their signals, and receivers can refine their response to signals with experience. In many birds and insects, individuals can produce more consistent signals with experience, and females across a wide taxonomic range can adaptively adjust mating preferences after perceiving distinct male signals. Third, in many species, individuals that succeed in reproducing encounter the novel, complex task of caring for vulnerable offspring. Evidence from a few species of mammals indicates that mothers improve in providing for and protecting their young over successive broods. Finally, for social expertise to evolve, heritable variation in social expertise has to be positively associated with fitness. Heritable variation has been shown in traits contributing to social expertise including social attention, empathy, individual recognition and maternal care. There are currently limited data associating social expertise with fitness, most likely owing to sparse research effort. Exceptions include maternal care, signal refinement, and familiarity with neighbours and group members. Overall, there is evidence that individuals in many species keep refining their social skills with experience throughout life. Hence we propose promising lines of research that can quantify more thoroughly the development of social expertise and its effects on fitness.
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  • 文章类型: Journal Article
    该研究旨在通过分析来自59个父亲和227个水坝的445只动物的数据来评估Hardhenu牛的表现特征。研究的重点是估算奶牛繁殖和生产性状的(协)方差成分和遗传参数。最小二乘法分析的结果表明产仔期(POC)对关键生产性状有显著影响(p<.01),包括第一次泌乳产奶量(FLMY),300天牛奶产量(FLMY300),研究人群的第一峰产奶量(FPY)和总泌乳产奶量(TLMY)。这些性状的最小二乘平均值报告如下:FLMY(2665.68±45.66kg),FLMY300(2425.52±34.41kg),FLL(312.95±3.83天),Hardhenu牛的FPY(11.52±0.15kg)和TLMY(9282.44±167.03kg)。在被研究的人群中,发现仅存在加性遗传变异性,并且对资源种群中的目标性状没有任何显着的母体效应。FLMY的直接遗传力估计(h2),FLMY300,FLL,FPY,Hardhenu牛的TLMY和其他性状范围为0.03至0.41。这些发现为影响性能特征的遗传因素提供了有价值的见解,有助于加强Hardhenu牛的育种和管理实践。
    The study aimed to assess performance traits in Hardhenu cattle by analysing data from 445 animals born to 59 sires and 227 dams. The investigation focused on estimating (co)variance components and genetic parameters for reproduction and production traits in dairy cattle. Results from least-squares analysis indicated a significant effect (p < .01) of the period of calving (POC) on key production traits, including first lactation milk yield (FLMY), 300-day milk yield (FLMY300), first peak yield (FPY) and total lactation milk yield (TLMY) in studied population. The least squares means for these traits were reported as follows: FLMY (2665.68 ± 45.66 kg), FLMY300 (2425.52 ± 34.41 kg), FLL (312.95 ± 3.83 days), FPY (11.52 ± 0.15 kg) and TLMY (9282.44 ± 167.03 kg) in Hardhenu cattle. In the studied population, only additive genetic variability was found to be present and there was absence of any significant maternal effect with respect to targeted traits in the resource population. Direct heritability estimates (h2) for FLMY, FLMY300, FLL, FPY, TLMY and other traits ranged from 0.03 to 0.41 in Hardhenu cattle. These findings offer valuable insights into the genetic factors influencing performance traits, contributing to the enhancement of breeding and management practices in Hardhenu cattle.
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