cancer vaccine

癌症疫苗
  • 文章类型: Journal Article
    长期以来,卵巢癌(OC)的死亡率一直是妇科恶性肿瘤中最高的。虽然OC被认为是一种免疫原性肿瘤,免疫治疗效果不理想。免疫抑制微环境是其中一个原因,另一个原因是缺乏公认的疫苗有效抗原。化疗,作为OC最常用的治疗方法之一,在治疗过程中可以产生化疗相关抗原(CAAs),并显示出原位疫苗的效果。在这里,我们设计了一种抗原捕获纳米疫苗NP-TP1@M-M,其肿瘤靶向肽TMTP1和树突状细胞(DC)受体甘露糖组装在表面,佐剂单磷酰脂质A(MPLA)包裹在聚(D,L-丙交酯-共-乙交酯)(PLGA)纳米颗粒。PLGA本身具有抗原捕获能力。TMTP1是由我们的研究小组筛选的肿瘤归巢肽,具有广泛而优异的肿瘤靶向能力。经过这些修改,NP-TP1@M-M可以在化疗后捕获和富集更多的肿瘤特异性抗原,刺激DC成熟,激活适应性免疫,并结合免疫检查点封锁,以最大限度地释放身体的免疫潜能,为OC的治疗提供了一种良好的治疗策略。
    The mortality of ovarian cancer (OC) has long been the highest among gynecological malignancies. Although OC is considered to be an immunogenic tumor, the effect of immunotherapy is not satisfactory. The immunosuppressive microenvironment is one reason for this, and the absence of recognized effective antigens for vaccines is another. Chemotherapy, as one of the most commonly used treatment for OC, can produce chemotherapy-associated antigens (CAAs) during treatment and show the effect of in situ vaccine. Herein, we designed an antigen capture nano-vaccine NP-TP1@M-M with tumor targeting peptide TMTP1 and dendritic cell (DC) receptor mannose assembled on the surface and adjuvant monophosphoryl lipid A (MPLA) encapsulated in the core of poly (D, L-lactide-co-glycolide) (PLGA) nanoparticles. PLGA itself possessed the ability of antigen capture. TMTP1 was a tumor-homing peptide screened by our research team, which held extensive and excellent tumor targeting ability. After these modifications, NP-TP1@M-M could capture and enrich more tumor-specific antigens after chemotherapy, stimulate DC maturation, activate the adaptive immunity and combined with immune checkpoint blockade to maximize the release of the body\'s immune potential, providing an eutherapeutic strategy for the treatment of OC.
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  • 文章类型: Journal Article
    胰腺导管腺癌(PDAC)是美国第三大致死性癌症,导致中位生存期为6个月,5年总生存期(OS)不到5%。作为唯一可能治愈的治疗方法,由于诊断较晚,手术切除不适合多达90%的PDAC患者。具有免疫抑制性肿瘤微环境的高度纤维化PDAC限制了细胞毒性T淋巴细胞(CTL)的浸润和功能,从而导致全身疗法如基于树突状细胞(DC)的免疫疗法的成功有限。在这项研究中,我们研究了不可逆电穿孔(IRE)消融治疗联合DC疫苗治疗抗PDAC的潜在益处.
    我们进行了文献检索,以确定专注于DC疫苗治疗和IRE消融的研究,以增强针对PubMed索引的PDAC的治疗反应,WebofScience,和Scopus直到2月20日,2023年。
    IRE消融破坏肿瘤结构,同时保留细胞外基质和血管促进局部炎症。研究表明,IRE消融除了增强啮齿动物模型中的免疫反应外,还可以减少肿瘤纤维化并促进CTL肿瘤向PDAC肿瘤的浸润。与单独使用DC疫苗接种或IRE相比,在IRE消融后施用DC疫苗协同地增强治疗反应并延长OS率。此外,数据驱动方法的实施进一步允许在IRE+DC疫苗免疫消融后动态和纵向监测治疗反应和OS.
    IRE消融和DC疫苗免疫疗法的组合是增强PDAC患者治疗结果的有效策略。
    UNASSIGNED: Pancreatic ductal adenocarcinoma (PDAC) is 3rd most lethal cancer in the USA leading to a median survival of six months and less than 5% 5-year overall survival (OS). As the only potentially curative treatment, surgical resection is not suitable for up to 90% of the patients with PDAC due to late diagnosis. Highly fibrotic PDAC with an immunosuppressive tumor microenvironment restricts cytotoxic T lymphocyte (CTL) infiltration and functions causing limited success with systemic therapies like dendritic cell (DC)-based immunotherapy. In this study, we investigated the potential benefits of irreversible electroporation (IRE) ablation therapy in combination with DC vaccine therapy against PDAC.
    UNASSIGNED: We performed a literature search to identify studies focused on DC vaccine therapy and IRE ablation to boost therapeutic response against PDAC indexed in PubMed, Web of Science, and Scopus until February 20th, 2023.
    UNASSIGNED: IRE ablation destructs tumor structure while preserving extracellular matrix and blood vessels facilitating local inflammation. The studies demonstrated IRE ablation reduces tumor fibrosis and promotes CTL tumor infiltration to PDAC tumors in addition to boosting immune response in rodent models. The administration of the DC vaccine following IRE ablation synergistically enhances therapeutic response and extends OS rates compared to the use of DC vaccination or IRE alone. Moreover, the implementation of data-driven approaches further allows dynamic and longitudinal monitoring of therapeutic response and OS following IRE plus DC vaccine immunoablation.
    UNASSIGNED: The combination of IRE ablation and DC vaccine immunotherapy is a potent strategy to enhance the therapeutic outcomes in patients with PDAC.
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  • 文章类型: Journal Article
    结直肠癌(CRC)仍然是一个重大的全球健康负担,强调创新治疗策略的必要性。95%的CRC种群是微卫星稳定的(MSS),对抗PD-1等经典免疫疗法不敏感;另一方面,反应者可以变得耐药和复发。最近,癌症疫苗的使用增强了对肿瘤细胞的免疫反应。在这种情况下,我们开发了一种基于刺激肿瘤细胞(STC)平台技术的治疗性疫苗。该疫苗由选定的肿瘤细胞系组成,这些细胞系在体外应激和半抗原化,以产生免疫原性癌症相关抗原的工厂,通过与患者活检的蛋白质组交叉分析进行验证。该技术允许对免疫系统进行多特异性教育,以靶向具有抗性克隆的肿瘤细胞。这里,我们报道了小鼠版STC疫苗在CT26BALB/c同系CRC小鼠模型上的安全性和抗肿瘤效力.我们表明一种基于细胞系(1CL)的STC疫苗抑制肿瘤生长并延长存活。此外,基于三种细胞系(3CL)的STC疫苗通过呈递额外的肿瘤相关抗原诱导多特异性抗肿瘤免疫应答,显著改善了这些参数.此外,蛋白质组学分析证实,与基于1CL的STC疫苗相比,基于3CL的STC疫苗代表的肿瘤相关蛋白的质量范围更广,涵盖了与肿瘤可塑性和治疗抗性相关的关键肿瘤抗原类别.我们还评估了STC疫苗在MC38抗PD-1抗性同系小鼠模型中的功效。使用基于3CL的STC疫苗的疫苗接种显着提高了存活率,并显示出通过CD8淋巴细胞T细胞和M1巨噬细胞浸润的增加而具有抗肿瘤活性的证实的完全应答。这些结果证明了该技术生产用于治疗CRC患者的人类疫苗的潜力。
    Colorectal cancer (CRC) remains a significant global health burden, emphasizing the need for innovative treatment strategies. 95% of the CRC population are microsatellite stable (MSS), insensitive to classical immunotherapies such as anti-PD-1; on the other hand, responders can become resistant and relapse. Recently, the use of cancer vaccines enhanced the immune response against tumor cells. In this context, we developed a therapeutic vaccine based on Stimulated Tumor Cells (STC) platform technology. This vaccine is composed of selected tumor cell lines stressed and haptenated in vitro to generate a factory of immunogenic cancer-related antigens validated by a proteomic cross analysis with patient\'s biopsies. This technology allows a multi-specific education of the immune system to target tumor cells harboring resistant clones. Here, we report safety and antitumor efficacy of the murine version of the STC vaccine on CT26 BALB/c CRC syngeneic murine models. We showed that one cell line (1CL)-based STC vaccine suppressed tumor growth and extended survival. In addition, three cell lines (3CL)-based STC vaccine significantly improves these parameters by presenting additional tumor-related antigens inducing a multi-specific anti-tumor immune response. Furthermore, proteomic analyses validated that the 3CL-based STC vaccine represents a wider quality range of tumor-related proteins than the 1CL-based STC vaccine covering key categories of tumor antigens related to tumor plasticity and treatment resistance. We also evaluated the efficacy of STC vaccine in an MC38 anti-PD-1 resistant syngeneic murine model. Vaccination with the 3CL-based STC vaccine significantly improved survival and showed a confirmed complete response with an antitumor activity carried by the increase of CD8+ lymphocyte T cells and M1 macrophage infiltration. These results demonstrate the potential of this technology to produce human vaccines for the treatment of patients with CRC.
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  • 文章类型: Journal Article
    膀胱癌(BC)约占所有恶性肿瘤的4%。非肌肉侵入性BC,75%的病例,经尿道电切术和辅助膀胱灌注治疗,而肌肉浸润性BC需要以顺铂为基础的围手术期化疗。虽然免疫检查点抑制剂,抗体药物缀合物和靶向药物提供了巨大的进步,转移性BC仍然是一种通常无法治愈的疾病,临床试验继续积极评估新分子.癌症疫苗旨在激活患者的免疫系统对抗肿瘤细胞。已经开发了几种递送新抗原的方法,包括肽,抗原呈递细胞,病毒,或核酸。各种改进不断被探索,如佐剂的使用和组合策略。近年来,以核酸为基础的疫苗越来越受到重视,对其他恶性肿瘤有希望的结果。然而,尽管最近的优势,许多障碍依然存在。这篇综述旨在描述不同类型的癌症疫苗,他们在UC患者中的评估以及该领域的最新创新。
    Bladder cancer (BC) accounts for about 4% of all malignancies. Non-muscle-invasive BC, 75% of cases, is treated with transurethral resection and adjuvant intravesical instillation, while muscle-invasive BC warrants cisplatin-based perioperative chemotherapy. Although immune-checkpoint inhibitors, antibody drug conjugates and targeted agents have provided dramatic advances, metastatic BC remains a generally incurable disease and clinical trials continue to vigorously evaluate novel molecules. Cancer vaccines aim at activating the patient\'s immune system against tumor cells. Several means of delivering neoantigens have been developed, including peptides, antigen-presenting cells, virus, or nucleic acids. Various improvements are constantly being explored, such as adjuvants use and combination strategies. Nucleic acids-based vaccines are increasingly gaining attention in recent years, with promising results in other malignancies. However, despite the recent advantages, numerous obstacles persist. This review is aimed at describing the different types of cancer vaccines, their evaluations in UC patients and the more recent innovations in this field.
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  • 文章类型: Journal Article
    CD4+T辅助抗原是癌症疫苗的重要组成部分,但这些MHCII类限制性抗原来源的相关性仍未得到充分研究。为了比较肿瘤特异性辅助抗原与肿瘤无关辅助抗原的有效性,我们为小鼠MC-38结肠癌设计了三种DNA疫苗,单独编码CD8+T细胞新抗原(noHELP)或与“通用”辅助抗原(uniHELP)或辅助新抗原(neoHELP)联合编码。两种类型的帮助疫苗都增加了疫苗诱导的CD8+T细胞的频率,特别是uniHELP增加了KLRG1+和PD-1低效应细胞的比例。然而,当小鼠随后注射MC-38细胞时,只有neoHELP疫苗接种的肿瘤控制效果明显优于noHELP。与uniHELP相比,neoHELP诱导的肿瘤控制依赖于CD4+T细胞的存在,而两种疫苗都依赖于CD8+T细胞。与此相符,含有CD4+或CD8+T细胞新抗原的野生型对应物的neoHELP变体显示出降低的肿瘤控制。这些数据表明最佳的个性化癌症疫苗应包括MHCII类限制性新抗原以引发肿瘤特异性CD4+T细胞帮助。
    CD4+ T helper antigens are essential components of cancer vaccines, but the relevance of the source of these MHC class II-restricted antigens remains underexplored. To compare the effectiveness of tumor-specific versus tumor-unrelated helper antigens, we designed three DNA vaccines for the murine MC-38 colon carcinoma, encoding CD8+ T cell neoantigens alone (noHELP) or in combination with either \"universal\" helper antigens (uniHELP) or helper neoantigens (neoHELP). Both types of helped vaccines increased the frequency of vaccine-induced CD8+ T cells, and particularly uniHELP increased the fraction of KLRG1+ and PD-1low effector cells. However, when mice were subsequently injected with MC-38 cells, only neoHELP vaccination resulted in significantly better tumor control than noHELP. In contrast to uniHELP, neoHELP-induced tumor control was dependent on the presence of CD4+ T cells, while both vaccines relied on CD8+ T cells. In line with this, neoHELP variants containing wild-type counterparts of the CD4+ or CD8+ T cell neoantigens displayed reduced tumor control. These data indicate that optimal personalized cancer vaccines should include MHC class II-restricted neoantigens to elicit tumor-specific CD4+ T cell help.
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  • 文章类型: Journal Article
    胰胆管癌,包括胰腺和胆道的恶性肿瘤,提出了一个可怕的临床挑战,其特征是一致的预后暗淡。其早期阶段的无症状性质通常导致延迟检测,导致不利的5年总生存率。传统的治疗方式显示出有限的疗效,强调迫切需要替代治疗方法。近年来,免疫疗法已成为对抗胰胆管癌的一个有希望的途径。诸如治疗性疫苗和肿瘤浸润性淋巴细胞的使用等策略因其引起更稳健和持久反应的潜力而引起关注。这篇综述旨在阐明新兴的免疫治疗干预措施的前景,提供从临床和研究角度的见解。通过加深对胰胆管癌的认识,探索创新的治疗方式,我们的目标是促进改善患者预后和生活质量.
    Pancreaticobiliary cancer, encompassing malignancies of both the pancreatic and biliary tract, presents a formidable clinical challenge marked by a uniformly bleak prognosis. The asymptomatic nature of its early stages often leads to delayed detection, contributing to an unfavorable 5-year overall survival rate. Conventional treatment modalities have shown limited efficacy, underscoring the urgent need for alternative therapeutic approaches. In recent years, immunotherapy has emerged as a promising avenue in the fight against pancreaticobiliary cancer. Strategies such as therapeutic vaccines and the use of tumor-infiltrating lymphocytes have garnered attention for their potential to elicit more robust and durable responses. This review seeks to illuminate the landscape of emerging immunotherapeutic interventions, offering insights from both clinical and research perspectives. By deepening our understanding of pancreaticobiliary cancer and exploring innovative treatment modalities, we aim to catalyze improvements in patient outcomes and quality of life.
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  • 文章类型: Journal Article
    胶质母细胞瘤(GBM)是最常见的原发性脑癌,占所有恶性脑肿瘤的一半。GBM患者预后差,中位生存期为14-15个月。目前GBM的治疗方法,包括化疗,放射治疗,和手术切除,保持不足。需要新的疗法来延长患者的生存期。尽管免疫疗法在其他癌症中显示出希望,包括黑色素瘤和非小细胞肺癌,其在GBM中的疗效仅限于患者亚群。识别GBM中免疫治疗反应的生物标志物可以帮助患者分层,确定新的治疗靶点,开发更有效的治疗方法。本文综述了GBM中免疫疗法临床反应的现有和新兴生物标志物。本综述的范围包括免疫检查点抑制剂和抗肿瘤疫苗接种方法,总结分子的多样性,细胞,以及在抗GBM免疫疗法的背景下探索的计算方法。
    Glioblastoma (GBM) is the most common primary brain cancer, comprising half of all malignant brain tumors. Patients with GBM have a poor prognosis, with a median survival of 14-15 months. Current therapies for GBM, including chemotherapy, radiotherapy, and surgical resection, remain inadequate. Novel therapies are required to extend patient survival. Although immunotherapy has shown promise in other cancers, including melanoma and non-small lung cancer, its efficacy in GBM has been limited to subsets of patients. Identifying biomarkers of immunotherapy response in GBM could help stratify patients, identify new therapeutic targets, and develop more effective treatments. This article reviews existing and emerging biomarkers of clinical response to immunotherapy in GBM. The scope of this review includes immune checkpoint inhibitor and antitumoral vaccination approaches, summarizing the variety of molecular, cellular, and computational methodologies that have been explored in the setting of anti-GBM immunotherapies.
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  • 文章类型: Journal Article
    颅内肿瘤由于其生理位置而提出了重大的治疗挑战。由于相对低的毒性和肿瘤特异性,免疫疗法提供了靶向这些颅内肿瘤的有吸引力的方法。在这里,我们显示SCIB1,一种TRP-2和gp100定向免疫抗体®DNA疫苗,产生强烈的TRP-2特异性免疫反应,如通过产生大量的TRP2特异性IFNγ斑点和在接种疫苗的小鼠的脾脏中检测到大量的五聚体阳性T细胞所证明的。此外,疫苗诱导的T细胞能够识别并杀死B16HHDII/DR1细胞。发现多形性胶质母细胞瘤(GBM)表达PD-L1和IDO1的显着水平,PD-L1与GBM间质亚型患者的生存率较差相关,我们决定将SCIB1ImmunoBody®与PD-1免疫检查点阻断联合治疗具有表达TRP-2和gp100的颅内肿瘤的小鼠.死亡时间明显延长,这与组织微环境(TME)中CD4和CD8T细胞浸润增加有关。然而,除了PD-L1和IDO,发现GBMTME含有大量免疫调节T(Treg)细胞相关转录本,这种细胞的存在可能会显著影响临床结果,除非也解决。
    Intracranial tumors present a significant therapeutic challenge due to their physiological location. Immunotherapy presents an attractive method for targeting these intracranial tumors due to relatively low toxicity and tumor specificity. Here we show that SCIB1, a TRP-2 and gp100 directed ImmunoBody® DNA vaccine, generates a strong TRP-2 specific immune response, as demonstrated by the high number of TRP2-specific IFNγ spots produced and the detection of a significant number of pentamer positive T cells in the spleen of vaccinated mice. Furthermore, vaccine-induced T cells were able to recognize and kill B16HHDII/DR1 cells after a short in vitro culture. Having found that glioblastoma multiforme (GBM) expresses significant levels of PD-L1 and IDO1, with PD-L1 correlating with poorer survival in patients with the mesenchymal subtype of GBM, we decided to combine SCIB1 ImmunoBody® with PD-1 immune checkpoint blockade to treat mice harboring intracranial tumors expressing TRP-2 and gp100. Time-to-death was significantly prolonged, and this correlated with increased CD4+ and CD8+ T cell infiltration in the tissue microenvironment (TME). However, in addition to PD-L1 and IDO, the GBM TME was found to contain a significant number of immunoregulatory T (Treg) cell-associated transcripts, and the presence of such cells is likely to significantly affect clinical outcome unless also tackled.
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  • 文章类型: Journal Article
    在本研究中,我们研究了来自整个SARS-CoV-2蛋白质组的肽是否与TAA(肿瘤相关抗原)和交叉反应性CD8T细胞具有同源性。BNT162b2预防性疫苗或SARS-CoV-2自然感染。
    预测对HLA-A*02:01等位基因具有高亲和力(<100nM)的病毒表位。鉴定了共有和变体特异性表位。已发现SARS-CoV-2肽与多种TAAs之间的氨基酸序列具有显著同源性,主要与乳房有关,肝脏,黑色素瘤和结肠癌。在所有病毒蛋白中发现了病毒表位和TAA的分子模拟,主要是Orf1ab和Spike,它包含在BNT162b2疫苗中。预测的结构相似性证实了序列同源性,并且观察到了与HLA和TCRα和β链的类似接触模式。已经通过MHCI类-葡聚糖染色发现了与配对肽交叉反应的CD8+T细胞克隆。
    我们的结果首次表明,几种SARS-COV-2抗原与TAA高度同源,并且在感染和BNT162b2预防性接种疫苗的个体中鉴定出交叉反应性T细胞。这意味着SARS-Cov-2大流行可以代表对乳房的自然预防性免疫,肝脏,黑色素瘤和结肠癌。在未来的几年里,现实世界的证据将为此类免疫学实验证据提供最终证据。此外,这种SARS-CoV-2表位可用于开发“多癌”现成的预防/治疗疫苗制剂,具有比过表达的肿瘤自身抗原更高的抗原性和免疫原性,为世界各地成千上万的癌症患者带来潜在的宝贵利益。
    UNASSIGNED: In the present study we investigated whether peptides derived from the entire SARS-CoV-2 proteome share homology to TAAs (tumor-associated antigens) and cross-reactive CD8+ T cell can be elicited by the BNT162b2 preventive vaccine or the SARS-CoV-2 natural infection.
    UNASSIGNED: Viral epitopes with high affinity (<100nM) to the HLA-A*02:01 allele were predicted. Shared and variant-specific epitopes were identified. Significant homologies in amino acidic sequence have been found between SARS-CoV-2 peptides and multiple TAAs, mainly associated with breast, liver, melanoma and colon cancers. The molecular mimicry of the viral epitopes and the TAAs was found in all viral proteins, mostly the Orf 1ab and the Spike, which is included in the BNT162b2 vaccine. Predicted structural similarities confirmed the sequence homology and comparable patterns of contact with both HLA and TCR α and β chains were observed. CD8+ T cell clones cross-reactive with the paired peptides have been found by MHC class l-dextramer staining.
    UNASSIGNED: Our results show for the first time that several SARS-COV-2 antigens are highly homologous to TAAs and cross-reactive T cells are identified in infected and BNT162b2 preventive vaccinated individuals. The implication would be that the SARS-Cov-2 pandemic could represent a natural preventive immunization for breast, liver, melanoma and colon cancers. In the coming years, real-world evidences will provide the final proof for such immunological experimental evidence. Moreover, such SARS-CoV-2 epitopes can be used to develop \"multi-cancer\" off-the-shelf preventive/therapeutic vaccine formulations, with higher antigenicity and immunogenicity than over-expressed tumor self-antigens, for the potential valuable benefit of thousands of cancer patients around the World.
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  • 文章类型: Journal Article
    背景:癌症疫苗的探索已经产生了大量的研究,导致不同的信息收集。癌症疫苗数据的异质性严重阻碍了有效的整合和分析。虽然CanVaxKB是670多种手动注释癌症疫苗的开创性数据库,区分数据库很重要,靠自己,不提供本体中的结构化关系和标准化定义。认识到这一点,我们扩大了疫苗本体论(VO),包括CanVaxKB中最初未涵盖的癌症疫苗,增强VO系统定义和关联癌症疫苗的能力。
    结果:首先开发了一种本体设计模式(ODP),并将其应用于语义表示各种癌症疫苗,捕获其关联的实体和关系。通过应用ODP,我们生成了表格格式的癌症疫苗模板,并将其转换为RDF/OWL格式,用于生成VO中的癌症疫苗术语.“12MP疫苗”被用作癌症疫苗的实例以证明ODP的应用。VO还重用参考本体术语来表示诸如癌症疾病和疫苗宿主等实体。开发了描述逻辑(DL)和SPARQL查询脚本,用于根据不同疫苗的特征查询癌症疫苗,并证明了VO表示的多功能性。此外,本体论建模用于说明癌症疫苗相关概念和研究,以进行深入的癌症疫苗分析。癌症疫苗特异性VO视图,称为“CVO,“生成了\”,它包含928类,包括704种癌症疫苗。CVOOWL文件可在http://purl上公开获得。obolibrary.org/obo/vo/cvo.猫头鹰,用于共享和应用程序。
    结论:为了促进标准化,一体化,和癌症疫苗数据分析,我们将疫苗本体论(VO)扩展到系统建模和代表癌症疫苗.我们还开发了一个管道,以自动将癌症疫苗和相关术语纳入VO。这不仅丰富了数据的标准化和集成化,而且还利用本体论建模来加深对癌症疫苗信息的分析,为研究人员和临床医生带来最大利益。
    背景:VO-cancerGitHub网站是:https://github.com/vaccineontology/VO/tree/master/CVO。
    BACKGROUND: The exploration of cancer vaccines has yielded a multitude of studies, resulting in a diverse collection of information. The heterogeneity of cancer vaccine data significantly impedes effective integration and analysis. While CanVaxKB serves as a pioneering database for over 670 manually annotated cancer vaccines, it is important to distinguish that a database, on its own, does not offer the structured relationships and standardized definitions found in an ontology. Recognizing this, we expanded the Vaccine Ontology (VO) to include those cancer vaccines present in CanVaxKB that were not initially covered, enhancing VO\'s capacity to systematically define and interrelate cancer vaccines.
    RESULTS: An ontology design pattern (ODP) was first developed and applied to semantically represent various cancer vaccines, capturing their associated entities and relations. By applying the ODP, we generated a cancer vaccine template in a tabular format and converted it into the RDF/OWL format for generation of cancer vaccine terms in the VO. \'12MP vaccine\' was used as an example of cancer vaccines to demonstrate the application of the ODP. VO also reuses reference ontology terms to represent entities such as cancer diseases and vaccine hosts. Description Logic (DL) and SPARQL query scripts were developed and used to query for cancer vaccines based on different vaccine\'s features and to demonstrate the versatility of the VO representation. Additionally, ontological modeling was applied to illustrate cancer vaccine related concepts and studies for in-depth cancer vaccine analysis. A cancer vaccine-specific VO view, referred to as \"CVO,\" was generated, and it contains 928 classes including 704 cancer vaccines. The CVO OWL file is publicly available on: http://purl.obolibrary.org/obo/vo/cvo.owl , for sharing and applications.
    CONCLUSIONS: To facilitate the standardization, integration, and analysis of cancer vaccine data, we expanded the Vaccine Ontology (VO) to systematically model and represent cancer vaccines. We also developed a pipeline to automate the inclusion of cancer vaccines and associated terms in the VO. This not only enriches the data\'s standardization and integration, but also leverages ontological modeling to deepen the analysis of cancer vaccine information, maximizing benefits for researchers and clinicians.
    BACKGROUND: The VO-cancer GitHub website is: https://github.com/vaccineontology/VO/tree/master/CVO .
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