biological transport

生物运输
  • 文章类型: Journal Article
    胞吞作用代表一类受调节的主动转运机制。这些包括网格蛋白依赖和独立的机制,以及液相微胞饮作用和巨细胞作用,每个都表现出不同程度的特异性和能力。总的来说,这些机制促进货物内化进入细胞囊泡。妊娠是一种这样的生理状态,在该状态期间内吞作用可能起关键作用。成功的妊娠需要母体和胎儿细胞在母胎界面上持续的交流,以确保对半同种异体胎儿的免疫耐受,同时提供足够的保护,防止病原体感染。如病毒和细菌。它还需要通过母胎界面运输营养物质,但限制潜在有害的化学物质和药物,以允许胎儿发育。在这种情况下,红细胞增多症,一种特定形式的内吞作用,在免疫耐受和感染预防中起着至关重要的作用。胞吞作用也被认为在母胎界面的营养和毒素处理中起重要作用。虽然它的机制仍然不太了解。对内吞作用及其机制的全面了解不仅可以增强我们对母胎相互作用的认识,而且对于确定妊娠病理的发病机理并为治疗干预提供新的途径也是必不可少的。
    Endocytosis represents a category of regulated active transport mechanisms. These encompass clathrin-dependent and -independent mechanisms, as well as fluid phase micropinocytosis and macropinocytosis, each demonstrating varying degrees of specificity and capacity. Collectively, these mechanisms facilitate the internalization of cargo into cellular vesicles. Pregnancy is one such physiological state during which endocytosis may play critical roles. A successful pregnancy necessitates ongoing communication between maternal and fetal cells at the maternal-fetal interface to ensure immunologic tolerance for the semi-allogenic fetus whilst providing adequate protection against infection from pathogens, such as viruses and bacteria. It also requires transport of nutrients across the maternal-fetal interface, but restriction of potentially harmful chemicals and drugs to allow fetal development. In this context, trogocytosis, a specific form of endocytosis, plays a crucial role in immunological tolerance and infection prevention. Endocytosis is also thought to play a significant role in nutrient and toxin handling at the maternal-fetal interface, though its mechanisms remain less understood. A comprehensive understanding of endocytosis and its mechanisms not only enhances our knowledge of maternal-fetal interactions but is also essential for identifying the pathogenesis of pregnancy pathologies and providing new avenues for therapeutic intervention.
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  • 文章类型: Journal Article
    维生素C在许多酶促反应中作为辅助因子和作为抗氧化应激的抗氧化剂中起着重要作用。由于包括人类在内的一些哺乳动物无法从葡萄糖从头合成维生素C,它从饮食来源的吸收是必不可少的,并由钠依赖性维生素C转运蛋白1(SVCT1)介导。尽管它在维持维生素C稳态方面具有生理意义,底物运输机制的结构基础仍不清楚。这里,我们以2.5-3.5µ分辨率报告了不同状态下人类SVCT1的低温EM结构。维生素C与两种钠离子的结合方式揭示了抗衡离子依赖性底物识别机制。此外,向内开放和闭塞结构的比较支持将电梯和不同旋转运动相结合的运输机构。我们的结果证明了维生素C转运的分子机制及其潜在的构象循环,可能导致未来的工业和医疗应用。
    Vitamin C plays important roles as a cofactor in many enzymatic reactions and as an antioxidant against oxidative stress. As some mammals including humans cannot synthesize vitamin C de novo from glucose, its uptake from dietary sources is essential, and is mediated by the sodium-dependent vitamin C transporter 1 (SVCT1). Despite its physiological significance in maintaining vitamin C homeostasis, the structural basis of the substrate transport mechanism remained unclear. Here, we report the cryo-EM structures of human SVCT1 in different states at 2.5-3.5 Å resolutions. The binding manner of vitamin C together with two sodium ions reveals the counter ion-dependent substrate recognition mechanism. Furthermore, comparisons of the inward-open and occluded structures support a transport mechanism combining elevator and distinct rotational motions. Our results demonstrate the molecular mechanism of vitamin C transport with its underlying conformational cycle, potentially leading to future industrial and medical applications.
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  • 文章类型: Journal Article
    了解转运机制对于开发阻止过敏原吸收和转运并防止过敏反应的抑制剂至关重要。然而,β-伴大豆球蛋白的过程,大豆中的主要过敏原,穿过肠粘膜屏障仍不清楚。本研究表明,IPEC-J2单层对β-伴大豆球蛋白水解产物的转运以时间和数量依赖性的方式发生。β-伴大豆球蛋白水解产物被吸收到IPEC-J2单层的细胞质中,而在细胞间隙中没有检测到。此外,甲基-β-环糊精(MβCD)和氯丙嗪(CPZ)等抑制剂可显着抑制β-伴大豆球蛋白水解产物的吸收和转运。特别感兴趣的是,色甘酸钠(SCG)对β-伴大豆球蛋白水解产物的吸收和转运表现出数量依赖性非线性抑制模型。总之,β-伴大豆球蛋白通过跨细胞途径穿过IPEC-J2单层,涉及网格蛋白介导的和caveolae依赖性的内吞机制。SCG通过网格蛋白介导的和Caveolae依赖性内吞作用,通过数量依赖性非线性模型抑制IPEC-J2单层对β-伴大豆球蛋白水解产物的吸收和转运。这些发现为大豆过敏的预防和治疗提供了有希望的目标。
    Understanding the transport mechanism is crucial for developing inhibitors that block allergen absorption and transport and prevent allergic reactions. However, the process of how beta-conglycinin, the primary allergen in soybeans, crosses the intestinal mucosal barrier remains unclear. The present study indicated that the transport of beta-conglycinin hydrolysates by IPEC-J2 monolayers occurred in a time- and quantity-dependent manner. The beta-conglycinin hydrolysates were absorbed into the cytoplasm of IPEC-J2 monolayers, while none were detected in the intercellular spaces. Furthermore, inhibitors such as methyl-beta-cyclodextrin (MβCD) and chlorpromazine (CPZ) significantly suppressed the absorption and transport of beta-conglycinin hydrolysates. Of particular interest, sodium cromoglycate (SCG) exhibited a quantity-dependent nonlinear suppression model on the absorption and transport of beta-conglycinin hydrolysates. In conclusion, beta-conglycinin crossed the IPEC-J2 monolayers through a transcellular pathway, involving both clathrin-mediated and caveolae-dependent endocytosis mechanisms. SCG suppressed the absorption and transport of beta-conglycinin hydrolysates by the IPEC-J2 monolayers by a quantity-dependent nonlinear model via clathrin-mediated and caveolae-dependent endocytosis. These findings provide promising targets for both the prevention and treatment of soybean allergies.
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  • 文章类型: Journal Article
    肥胖是2型糖尿病(T2DM)和心血管疾病(CVD)的危险因素。脂肪组织(AT)细胞外囊泡(EV)可能通过其特定货物对受体细胞基因表达的影响,在肥胖和T2DM相关的CVD进展中发挥作用。这项工作的目的是评估有/没有T2DM的肥胖患者的ATEV对来自健康供体的人单核细胞衍生的巨噬细胞(MDMs)中胆固醇反向转运(RCT)相关基因表达的影响。离体培养内脏和皮下AT后获得ATEV(VAT和SAT,分别)。ABCA1,ABCG1,PPARG,LXRβ(NR1H2),通过实时PCR确定MDM以及原始AT中的LXRα(NR1H3)mRNA水平。T2DMVAT和SATEV诱导ABCG1基因表达,而LXRα和PPARGmRNA水平同时下调。在没有T2DM的肥胖患者的VATEV存在下,PPARGmRNA水平也降低。相反,随着肥胖ATEV的加入,ABCA1和LXRβmRNA水平趋于增加。因此,ATEV可以影响肥胖期间MDM中RCT基因的表达,影响取决于T2DM的状态。
    Obesity is a risk factor for type 2 diabetes mellitus (T2DM) and cardiovascular disease (CVD). Adipose tissue (AT) extracellular vesicles (EVs) could play a role in obesity and T2DM associated CVD progression via the influence of their specific cargo on gene expression in recipient cells. The aim of this work was to evaluate the effects of AT EVs of patients with obesity with/without T2DM on reverse cholesterol transport (RCT)-related gene expression in human monocyte-derived macrophages (MDMs) from healthy donors. AT EVs were obtained after ex vivo cultivation of visceral and subcutaneous AT (VAT and SAT, respectively). ABCA1, ABCG1, PPARG, LXRβ (NR1H2), and LXRα (NR1H3) mRNA levels in MDMs as well as in origine AT were determined by a real-time PCR. T2DM VAT and SAT EVs induced ABCG1 gene expression whereas LXRα and PPARG mRNA levels were simultaneously downregulated. PPARG mRNA levels also decreased in the presence of VAT EVs of obese patients without T2DM. In contrast ABCA1 and LXRβ mRNA levels tended to increase with the addition of obese AT EVs. Thus, AT EVs can influence RCT gene expression in MDMs during obesity, and the effects are dependent on T2DM status.
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  • 文章类型: Journal Article
    近端肾小管上皮细胞中特定转运蛋白的极化表达对于许多内源性和外源性化合物的肾清除很重要。因此,理想情况下,用于预测的体外工具将具有与体内相似的顶端和基底外侧异种生物转运蛋白表达。这里,我们评估了从人诱导多能干细胞(iPSC)分化的近端肾小管样细胞(PTL)中有机阳离子和阴离子转运蛋白的功能,原代人近端肾小管上皮细胞(PTEC),和端粒酶永生化人肾近端肾小管上皮细胞(RPTEC/TERT1)。使用荧光底物4-(4-(二甲基氨基)苯乙烯基)-N-甲基吡啶碘化物(ASP)和6-羧基荧光素(6-CF)研究了有机阳离子和阴离子的迁移,分别。与原代PTEC和RPTEC/TERT1细胞相比,基底外侧施用后PTL中细胞内ASP积累的水平和速率略低,但在3倍范围内。在所有模型中,基底外侧暴露于奎尼丁都可以抑制ASP的基底外侧吸收及其随后的顶端外排。在这三个模型中,只有PTL显示适度的基底外侧至根尖6-CF转移。这些结果表明,有机阳离子运输可以在所有三个模型中得到证明,但是需要更多的研究来改善和优化有机阴离子转运蛋白的表达和功能。
    The polarised expression of specific transporters in proximal tubular epithelial cells is important for the renal clearance of many endogenous and exogenous compounds. Thus, ideally, the in vitro tools utilised for predictions would have a similar expression of apical and basolateral xenobiotic transporters as in vivo. Here, we assessed the functionality of organic cation and anion transporters in proximal tubular-like cells (PTL) differentiated from human induced pluripotent stem cells (iPSC), primary human proximal tubular epithelial cells (PTEC), and telomerase-immortalised human renal proximal tubular epithelial cells (RPTEC/TERT1). Organic cation and anion transport were studied using the fluorescent substrates 4-(4-(dimethylamino)styryl)-N-methylpyridinium iodide (ASP) and 6-carboxyfluorescein (6-CF), respectively. The level and rate of intracellular ASP accumulation in PTL following basolateral application were slightly lower but within a 3-fold range compared to primary PTEC and RPTEC/TERT1 cells. The basolateral uptake of ASP and its subsequent apical efflux could be inhibited by basolateral exposure to quinidine in all models. Of the three models, only PTL showed a modest preferential basolateral-to-apical 6-CF transfer. These results show that organic cation transport could be demonstrated in all three models, but more research is needed to improve and optimise organic anion transporter expression and functionality.
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  • 文章类型: Journal Article
    转运蛋白被内源性代谢物和外源性分子靶向到达细胞目的地,但通常不理解不同的底物类如何利用相同的转运机制。当用不同底物处理时,转运蛋白机制中可塑性的任何公开对于开发膜转运催化中的一般选择性原理变得至关重要。使用广泛的分子动力学模拟和增强的采样方法,我们选择拟南芥糖转运蛋白AtSWEET13作为模型系统,以确定葡萄糖与蔗糖分子识别和转运的基础。在这里,我们发现AtSWEET13化学选择性源于在进行替代访问时证明的保守底物面部选择性,尽管单/二糖在整个其他运输阶段经历不同程度的构象和位置自由度。然而,与已知功能注释相关的结构标志的底物相互作用可以帮助增强分子运输中的选择性偏好。
    Transporters are targeted by endogenous metabolites and exogenous molecules to reach cellular destinations, but it is generally not understood how different substrate classes exploit the same transporter\'s mechanism. Any disclosure of plasticity in transporter mechanism when treated with different substrates becomes critical for developing general selectivity principles in membrane transport catalysis. Using extensive molecular dynamics simulations with an enhanced sampling approach, we select the Arabidopsis sugar transporter AtSWEET13 as a model system to identify the basis for glucose versus sucrose molecular recognition and transport. Here we find that AtSWEET13 chemical selectivity originates from a conserved substrate facial selectivity demonstrated when committing alternate access, despite mono-/di-saccharides experiencing differing degrees of conformational and positional freedom throughout other stages of transport. However, substrate interactions with structural hallmarks associated with known functional annotations can help reinforce selective preferences in molecular transport.
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  • 文章类型: Journal Article
    尿酸诱导自由基氧的形成,内皮炎症,以及导致动脉粥样硬化进展的内皮功能障碍。非布索坦抑制人胚肾细胞中BCRP-和别嘌呤醇刺激MRP4介导的尿酸流出。我们假设内皮细胞表达调节细胞内尿酸浓度的尿酸转运体,并且非布索坦和别嘌呤醇对这些转运体的调节有助于它们对心血管死亡率的不同影响。本研究的目的是探讨非布索坦和别嘌呤醇对人脐静脉内皮细胞吸收尿酸的影响之间的潜在差异。与对照组相比,非布索坦增加了细胞内尿酸浓度。相比之下,别嘌醇不影响细胞内尿酸浓度。根据这一观察,非布索坦增加GLUT9的mRNA表达,降低MRP4表达,而别嘌醇不影响这些尿酸转运蛋白的mRNA表达。这些发现提供了可能的病理生理途径,可以解释非布索坦与别嘌呤醇相比更高的心血管死亡率,但需要进一步探索。
    Uric acid induces radical oxygen species formation, endothelial inflammation, and endothelial dysfunction which contributes to the progression of atherosclerosis. Febuxostat inhibits BCRP- and allopurinol stimulates MRP4-mediated uric acid efflux in human embryonic kidney cells. We hypothesized that endothelial cells express uric acid transporters that regulate intracellular uric acid concentration and that modulation of these transporters by febuxostat and allopurinol contributes to their different impact on cardiovascular mortality. The aim of this study was to explore a potential difference between the effect of febuxostat and allopurinol on uric acid uptake by human umbilical vein endothelial cells. Febuxostat increased intracellular uric acid concentrations compared with control. In contrast, allopurinol did not affect intracellular uric acid concentration. In line with this observation, febuxostat increased mRNA expression of GLUT9 and reduced MRP4 expression, while allopurinol did not affect mRNA expression of these uric acid transporters. These findings provide a possible pathophysiological pathway which could explain the higher cardiovascular mortality for febuxostat compared to allopurinol but should be explored further.
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  • 文章类型: Journal Article
    虽然不均匀的扩散率被认为是细胞内部普遍存在的特征,它在不同长度尺度下对粒子迁移率和浓度的影响仍未被探索。在这项工作中,我们使用基于代理的扩散模拟来研究异质扩散率如何影响扩散粒子的运动和浓度。我们提出,由于扩散轨迹收敛到低扩散汇而产生的无膜分隔的非平衡模式,我们称之为扩散透镜,\'与生命系统有关。我们的工作强调了扩散透镜现象作为细胞质中尺度动力学的潜在关键驱动因素,可能对生化过程产生深远的影响。
    While inhomogeneous diffusivity has been identified as a ubiquitous feature of the cellular interior, its implications for particle mobility and concentration at different length scales remain largely unexplored. In this work, we use agent-based simulations of diffusion to investigate how heterogeneous diffusivity affects the movement and concentration of diffusing particles. We propose that a nonequilibrium mode of membrane-less compartmentalization arising from the convergence of diffusive trajectories into low-diffusive sinks, which we call \'diffusive lensing,\' is relevant for living systems. Our work highlights the phenomenon of diffusive lensing as a potentially key driver of mesoscale dynamics in the cytoplasm, with possible far-reaching implications for biochemical processes.
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  • 文章类型: Journal Article
    镉(Cd)对植物的许多关键生长和发育过程具有毒性影响,显著影响种子发芽率,蒸腾速率,叶绿素含量,和生物质。虽然在植物的Cd吸收和解毒方面取得了相当大的进步,植物适应和耐受Cd毒性的机制仍然难以捉摸。本文综述了Cd与植物的关系以及Cd污染的植物修复前景。我们重点研究了以下几个问题:(1)Cd污染现状及其相关危害,包括Cd的来源和分布以及对人类健康构成的风险;(2)Cd吸收和运输的潜在机制,包括与摄取相关的生理过程,易位,和镉的解毒,以及与这些过程相关的基因家族;(3)Cd对植物的有害影响和解毒机制,比如抗性基因的激活,根螯合,液泡分隔,抗氧化系统的活化和非酶抗氧化剂的产生;(4)植物修复的实际应用以及掺入外源物质对植物耐Cd性的影响。
    Cadmium (Cd) exerts a toxic influence on numerous crucial growth and development processes in plants, notably affecting seed germination rate, transpiration rate, chlorophyll content, and biomass. While considerable advances in Cd uptake and detoxification of plants have been made, the mechanisms by which plants adapt to and tolerate Cd toxicity remain elusive. This review focuses on the relationship between Cd and plants and the prospects for phytoremediation of Cd pollution. We highlight the following issues: (1) the present state of Cd pollution and its associated hazards, encompassing the sources and distribution of Cd and the risks posed to human health; (2) the mechanisms underlying the uptake and transport of Cd, including the physiological processes associated with the uptake, translocation, and detoxification of Cd, as well as the pertinent gene families implicated in these processes; (3) the detrimental effects of Cd on plants and the mechanisms of detoxification, such as the activation of resistance genes, root chelation, vacuolar compartmentalization, the activation of antioxidant systems and the generation of non-enzymatic antioxidants; (4) the practical application of phytoremediation and the impact of incorporating exogenous substances on the Cd tolerance of plants.
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  • 文章类型: Journal Article
    真核天冬酰胺(N)-连接的聚糖在内质网(ER)中的脂质载体上预组装为14-糖寡糖。首先将七种糖添加到ER的细胞质面上的多立康焦磷酸盐(PP-Dol)中,产生Man5GlcNAc2-PP-Dol(M5GN2-PP-Dol)。然后通过ER转位器将M5GN2-PP-Dol翻转穿过双层进入管腔。遗传研究将Rft1鉴定为体内M5GN2-PP-Dol翻转酶,但与生化数据不符,表明Rft1对于体外翻转是不必要的。因此,20多年来,Rft1在M5GN2-PP-Dol易位过程中起直接或间接作用的问题一直存在争议.我们描述了M5GN2-PP-Dol易位的完全重建的体外测定,并证明纯化的Rft1催化M5GN2-PP-Dol跨脂质双层的易位。这些数据,结合体外结果,证明底物选择性和rftlΔ表型,确认Rft1作为M5GN2-PP-DolER翻转酶的分子身份。
    The eukaryotic asparagine (N)-linked glycan is pre-assembled as a fourteen-sugar oligosaccharide on a lipid carrier in the endoplasmic reticulum (ER). Seven sugars are first added to dolichol pyrophosphate (PP-Dol) on the cytoplasmic face of the ER, generating Man5GlcNAc2-PP-Dol (M5GN2-PP-Dol). M5GN2-PP-Dol is then flipped across the bilayer into the lumen by an ER translocator. Genetic studies identified Rft1 as the M5GN2-PP-Dol flippase in vivo but are at odds with biochemical data suggesting Rft1 is dispensable for flipping in vitro. Thus, the question of whether Rft1 plays a direct or an indirect role during M5GN2-PP-Dol translocation has been controversial for over two decades. We describe a completely reconstituted in vitro assay for M5GN2-PP-Dol translocation and demonstrate that purified Rft1 catalyzes the translocation of M5GN2-PP-Dol across the lipid bilayer. These data, combined with in vitro results demonstrating substrate selectivity and rft1∆ phenotypes, confirm the molecular identity of Rft1 as the M5GN2-PP-Dol ER flippase.
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