Sludge

污泥
  • 文章类型: Journal Article
    背景:非瓣膜性心房颤动(NVAF)的卒中和血栓栓塞主要起因于左心耳(LAA)的血栓或淤泥。全面了解这些编队的特征对于有效的风险评估和管理至关重要。
    方法:我们在2017年12月至2019年4月期间,对176例连续NVAF患者进行了单中心回顾性观察,这些患者通过消融前经食管超声心动图(TEE)确定为心房/附件血栓或污泥。我们获得了临床和超声心动图特征,包括左心耳排空速度(LAAeV)和充盈速度(LAAfV)。数据分析侧重于确定血栓或污泥的形态和位置。将患者分为固体血栓组和污泥组,并分析了临床和超声心动图变量与血栓状态之间的相关性。
    结果:形态分类:总计,在78名患者中发现了血栓,包括71(40.3%)质量和7(4.0%)层状,而污泥在98(55.7%)中被注意到。部位分类:92.3%(72/78)的患者有局限于左心耳的血栓;3.8%(3/78)的患者有LA和LAA受累;2.7%(2/78)的患者有LA,LAA和RAA延伸到RA,其余1.2%(1/78)分离至RAA。98.0%(96/98)的患者有污泥局限于左心耳;其余2.0%(2/98)存在于房间隔动脉瘤中,房间隔伸入RA。血栓和污泥组显示低LAAeV(19.43±9.59cm/s)或LAAfV(17.40±10.09cm/s)。在多变量模型中,只有LA尺寸≥40mm与血栓状态独立相关。
    结论:这项队列研究确定了罕见的血栓形态,并系统地总结了血栓形态的分类。更新了LAA以外的血栓和污泥的分布,包括双侧心房和附件受累和罕见的房间隔动脉瘤污泥。LAAeV和LAAfV在区分固体血栓和污泥方面的价值有限。
    背景:ChiCTR-OCH-13,003,729。
    BACKGROUND: Stroke and thromboembolism in nonvalvular atrial fibrillation (NVAF) primarily arise from thrombi or sludge in the left atrial appendage (LAA). Comprehensive insight into the characteristics of these formations is essential for effective risk assessment and management.
    METHODS: We conducted a single-center retrospective observational of 176 consecutive NVAF patients with confirmed atrial/appendage thrombus or sludge determined by a pre-ablation transesophageal echocardiogram (TEE) from December 2017 to April 2019. We obtained clinical and echocardiographic characteristics, including left atrial appendage emptying velocity (LAAeV) and filling velocity (LAAfV). Data analysis focused on identifying the morphology and location of thrombus or sludge. Patients were divided into the solid thrombus and sludge groups, and the correlation between clinical and echocardiographic variables and thrombotic status was analyzed.
    RESULTS: Morphological classification: In total, thrombi were identified in 78 patients, including 71 (40.3%) mass and 7 (4.0%) lamellar, while sludge was noted in 98 (55.7%). Location classification: 92.3% (72/78) of patients had thrombus confined to the LAA; 3.8% (3/78) had both LA and LAA involvement; 2.7% (2/78) had LA, LAA and RAA extended into the RA, the remained 1.2%(1/78) was isolated to RAA. 98.0% (96/98) of patients had sludge confined to the LAA; the remaining 2.0% (2/98) were present in the atrial septal aneurysm, which protrusion of interatrial septum into the RA. The thrombus and sludge groups showed low LAAeV (19.43 ± 9.59 cm/s) or LAAfV (17.40 ± 10.09 cm/s). Only LA dimension ≥ 40 mm was independently associated with the thrombus state in the multivariable model.
    CONCLUSIONS: This cohort study identified rare thrombus morphology and systematically summarized the classification of thrombus morphology. The distribution of thrombus and sludge outside limited to LAA was updated, including bilateral atrial and appendage involvement and rare atrial septal aneurysm sludge. LAAeV and LAAfV were of limited value in distinguishing solid thrombus from sludge.
    BACKGROUND: ChiCTR-OCH-13,003,729.
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  • 文章类型: Journal Article
    这项研究调查了在热混合沥青(HMA)中使用饮用水处理污泥作为填充材料的适用性。污泥的储存和环境影响是一个巨大的问题,特别是对于人口众多的国家。两种不同类型的污泥,氯化铁(FC)和硫酸铝(AS),在HMA中用作填充材料。汉堡车轮跟踪(HWT)测试,这与车辙相关,和间接抗拉强度(ITS)测试,这表明了HMA的湿度敏感性,在混合物的最佳沥青含量下进行,以研究污泥在HMA中的可用性。测试结果表明,与参考混合物相比,FC和AS在HMA中的可用性。然而,AS型污泥比FC型污泥具有更好的抗车辙性能。尽管结果支持HMA中两种污泥的可用性,应注意,应考虑到由于燃烧过程而增加的含污泥混合物的成本和在应用期间增加的沥青含量。
    This research investigated the suitability of using sludge from the treatment of drinking water in hot mix asphalt (HMA) as a filler material. The storage and environmental impact of sludge is an enormous problem, especially for countries with large populations. Two different types of sludges, ferric chloride (FC) and aluminium sulphate (AS), were used as a filler material in HMA. The Hamburg Wheel Tracking (HWT) test, which correlates with rutting, and the Indirect Tensile Strength (ITS) test, which indicates the moisture sensitivity of HMA, were carried out at the optimum bitumen content of the mixes to investigate the usability of sludge in HMA. The test results indicate the usability of FC and AS in HMA compared to the reference mixes. However, the AS type of sludge has better rutting resistance than the FC type. Although the results support the usability of both sludges in HMA, it should be noted that the increased cost of the mix containing sludges due to the combustion process and the increased bitumen content during application should be considered.
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  • 文章类型: Journal Article
    人工湿地系统(CWS)中的微生物群落多样性在去除废水中的污染物中起着关键作用。在NeelaHauz生物多样性公园开发的集成功能CWS,选择德里来评估CWS污泥和沉积物的微生物群落多样性的组成和结构多样性,基于使用16SrRNA基因的宏基因组方法。沉积物显示出比污泥更高的多样性,并且都形成了不同的簇。CWS微生物群落的分类结构由分布在2个王国中的6,731个OTU表示,103门,227班,337个订单,320个家庭,295个鉴定属,和84个确定的物种。污泥和沉积物的前5个优势门的相对丰度从3.77%(酸性细菌)到35.33%(变形杆菌)和4.07%(Firmicutes)到28.20%(变形杆菌),分别。污泥和沉积物的前5个优势属的相对丰度变化范围为2.58%(微生物)至6.61%(平生菌属)和2.47%(梭菌属)至4.22%(同步菌属),分别。CWS丰富的微生物多样性使其在污染物去除方面的表现优于其他CW(59.91-95.76%)。根据分类群的丰度值,分类单元分为四个频率分布类别-丰富(>20),普通(10-19),罕见(5-9),非常罕见(1-4)。整合CWS的微生物群落的独特结构是丰富的分类单元的数量按分类层次的降序减少,而稀有和非常稀有类群的数量增加。例如,污泥和沉积物中丰富的门的数量分别为14和21,两个群落分别只有3个丰富的属。这与污泥和沉积物中非常罕见的4和17门形成鲜明对比,两个群落分别有114个和91个非常罕见的属,分别。该研究的结果是,整合的CWS具有比其他CW报道的多样性高得多的微生物群落多样性,丰富的多样性可用于优化水煤浆去除废水中污染物的性能效率。这种结构多样性可能是对CWS异质环境的适应。
    The microbial community diversity in Constructed Wetland System (CWS) plays a key role in the removal of pollutants from waste water. An integrated functional CWS developed at Neela Hauz Biodiversity Park, Delhi was selected to assess the diversity in composition and structure of microbial community diversity of sludge and sediment of CWS, based on metagenomic approach using 16S rRNA genes. The sediment showed higher diversity than sludge and both formed distinct clusters. The taxonomic structure of the microbial community of CWS is represented by 6,731 OTUs distributed among 2 kingdoms, 103 phyla, 227 classes, 337 orders, 320 families, 295 identified genera, and 84 identified species. The relative abundance of top 5 dominant phyla of sludge and sediment varied from 3.77% (Acidobacteria) to 35.33% (Proteobacteria) and 4.07% (Firmicutes) to 28.20% (Proteobacteria), respectively. The range of variation in relative abundance of top 5 dominant genera of sludge and sediment was 2.58% (Hyphomicrobium) to 6.61% (Planctomyces) and 2.47% (Clostridium) to 4.22% (Syntrophobacter), respectively. The rich microbial diversity of CWS makes it perform better in pollutants removal (59.91-95.76%) than other CWs. Based on the abundance values of taxa, the taxa are grouped under four frequency distribution classes-abundant (>20), common (10-19), rare (5-9), and very rare (1-4). The unique structure of microbial communities of integrated CWS is that the number of abundant taxa decreases in descending order of taxonomic hierarchy, while the number of rare and very rare taxa increases. For example, the number of abundant phyla was 14 and 21 in sludge and sediment, respectively and both communities have only 3 abundant genera each. This is in contrast to 4 and 17 very rare phyla in sludge and sediment, respectively and both the communities have 114 and 91 very rare genera, respectively. The outcomes of the study is that the integrated CWS has much higher microbial community diversity than the diversity reported for other CWs, and the rich diversity can be used for optimizing the performance efficiency of CWS in the removal of pollutants from waste water. Such structural diversity might be an adaptation to heterogeneous environment of CWS.
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  • 文章类型: Journal Article
    环境中的抗菌素耐药性(AMR)污染是21世纪最重要的全球威胁之一。由于污泥大量暴露于多种污染物中,包括药品,预计居民细菌种群对抗菌药物具有抗性。在这项研究中,污水处理厂(STP)污泥样品进行了分析,以评估抗生素抗性细菌种群,丰富的AMR基因(ermF,qnrS,Sul1,blages,BlaCTX-M,和blaNDM),和移动遗传元件(intl1和IS26)。在16种细菌中,有6种细菌对13种抗生素具有高的多重抗生素耐药指数(MARI)(0.93)和高的金属耐受性。定量聚合酶链反应显示目标基因的丰度范围为6.6×103至6.5×108个拷贝g-1污泥。总体结果表明,STP污泥包含各种多药耐药细菌种群。它将深入了解重金属和生物膜发育在AMR基因和相关细菌的选择和传播中的功能。因此,污泥的应用需要适当的筛选AMR和金属污染之前,其无数的应用。这项研究将极大地有助于STP废水对环境健康的风险分析,包括控制AMR传输。
    Antimicrobial resistance (AMR) contamination in the environment is one of the most significant worldwide threats of the 21st century. Since sludge is heavily exposed to diverse contaminants, including pharmaceuticals, the inhabitant bacterial population is expected to exhibit resistance to antimicrobial agents. In this study, sewage treatment plant (STP) sludge samples were analyzed to assess the antibiotic-resistant bacterial population, abundance of AMR genes (ermF, qnrS, Sul1, blaGES, blaCTX-M, and blaNDM), and mobile genetic elements (intl1 and IS26). Out of 16, six bacterial isolates exhibited resistance to 13 antibiotics with a high multiple antibiotic resistance index (MARI) (0.93) and high metal tolerance. Quantitative polymerase chain reaction showed the abundance of target genes ranging from 6.6 × 103 to 6.5 × 108 copies g-1 sludge. The overall outcome reveals that STP sludge comprised varied multidrug-resistant bacterial populations. It will give insights into the functions of heavy metals and biofilm development in the selection and spread of AMR genes and the associated bacteria. Therefore, the application of sludge needs proper screening for AMR and metal contamination prior to its countless applications. This study will contribute immensely to the risk analysis of STP effluents on environmental health, including control of AMR transmission.
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  • 文章类型: Journal Article
    调查尼日利亚抗生素抗性细菌(ARB)和抗生素抗性基因(ARG)的环境热点的研究有限。这项研究旨在评估各种环境来源和通常接触的表面作为ARB和ARG的潜在携带者,对公共卫生具有影响。共392个样品,包括污水(36),污泥(36),尿布(20),塑料(20),水袋聚乙烯袋(20),食物垃圾(20)垃圾场下的土壤(20),经常接触的表面,如洗手间地板(80),走廊(24)门把手(56),和房间地板和墙壁(60),收集并筛选是否存在携带基因的耐药细菌,如BLAKPC,BLANDM-1,BLACMY-2,BLAIMP,BlaOXA66和MecA.此外,我们采用标准技术检测耐甲氧西林金黄色葡萄球菌(MRSA)和产超广谱β-内酰胺酶(ESBL)的大肠杆菌,肺炎克雷伯菌,铜绿假单胞菌和鲍曼不动杆菌。我们还评估了常规消毒程序在消除洗手间地板上的ARB方面的有效性。我们的研究结果表明,污水,污泥,尿布,食物垃圾和洗手间地板经常被高度和中度耐药的大肠杆菌菌株污染,肺炎克雷伯菌,铜绿假单胞菌和MRSA。值得注意的是,我们在从这些环境来源分离的鲍曼不动杆菌中鉴定了BlaOXA51样基因的两种变体(BlaOXA-66和BlaOXA-180)。此外,我们检测到7个ESBL-肺炎克雷伯菌,五个ESBL-A鲍曼不动杆菌,两个ESBL-大肠杆菌和一个ESBL-铜绿假单胞菌,所有携带一个或多个ARG(blaKPC,BLANDM-1,BLACMY-2),在从污水中回收的分离物中,污泥,洗手间地板和塑料。值得注意的是,即使在消毒程序之后,ARB仍在洗手间地板上。总之,这项研究强调,在居民区和个人共享表面中随意丢弃的环境废物被携带具有重大公共卫生重要性的ARG的ARB大量定居。
    Studies investigating environmental hotspots of antibiotic-resistant bacteria (ARB) and antibiotic resistance genes (ARGs) in Nigeria are limited. This study was designed to assess various environmental sources and commonly touched surfaces as potential carriers of ARB and ARGs with implications for public health. A total of 392 samples, including sewage (36), sludge (36), diapers (20), plastics (20), water sachet polythene bags (20), food wastes (20), soil beneath dump sites (20), and frequently touched surfaces such as restroom floors (80), corridors (24), door handles (56), and room floors and walls (60), were collected and screened for the presence of resistant bacteria carrying genes such as bla KPC, bla NDM-1, bla CMY-2, bla IMP, bla OXA66 and MecA. Additionally, we employed standard techniques to detect methicillin-resistant Staphylococcus aureus (MRSA) and extended-spectrum β-lactamase (ESBL)-producing Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa and Acinetobacter baumannii . We also evaluated the effectiveness of routine disinfection procedures in eliminating ARB from restroom floors. Our findings revealed that sewage, sludge, diapers, food wastes and restroom floors are frequently contaminated with highly and moderately resistant strains of E. coli, K. pneumoniae, P. aeruginosa and MRSA. Notably, we identified two variants of the bla OXA51-like gene (bla OXA-66 and bla OXA-180) in A. baumannii isolated from these environmental sources. Furthermore, we detected seven ESBL- K. pneumoniae , five ESBL- A. baumannii , two ESBL- E. coli and one ESBL- P. aeruginosa , all carrying one or more ARGs (bla KPC, bla NDM-1, bla CMY-2), in isolates recovered from sewage, sludge, restroom floors and plastics. It is of note that ARB persisted on restroom floors even after disinfection procedures. In conclusion, this study highlights that environmental wastes indiscriminately discarded in residential areas and shared surfaces among individuals are heavily colonized by ARB carrying ARGs of significant public health importance.
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  • 文章类型: Journal Article
    这项研究是为了调查工业活动对废水中重金属状况的影响,Hayatabad工业区选定的主要排水沟河岸上的污泥和植物区系,白沙瓦.植物,收集选定地点的污泥和废水样品,分析重金属分布;镉(Cd),铬(Cr),铅(Pb)和锌(Zn)水平。计算了在所有地点自然发现的植物(Phalaris次要)草物种的生物富集因子(BCF)值。结果表明,与各自的标准相比,废水中除Cd以外的金属含量均低于允许的限值,植物和污泥中的金属浓度均在允许的限值内。金属分布按以下顺序;污泥>植物>废水,金属浓度根据距源的距离而变化,没有特定的模式。与植物和废水样品相比,所有地点的污泥样品均显示出高浓度的金属。在草样本中,所有地点的Zn最高,Cd较低。植物中金属的积累顺序为;根>芽。Pearson系数相关性表明,植物根中的Cr和芽中的Zn与污泥中的Cd呈显着的高度相关,而根中的Pb与污泥中的Zn呈显着的负相关。Cr的BCF值,Pb和Zn均>1,显示了植物的植物修复潜力。
    This study was conducted to investigate the impact of industrial activities on heavy metals status in wastewater, sludge and flora on the bank of selected main drains of the Hayatabad Industrial estate, Peshawar. Plants, sludge and wastewater samples of selected sites were collected and analyzed for heavy metals distribution; cadmium (Cd), chromium (Cr), lead (Pb) and zinc (Zn) levels. Bioconcentration factor (BCF) values were calculated for plants (Phalaris minor) grass species found naturally at all sites. The results showed that the levels of metals in wastewater were lower than permissible limits except Cd and the concentration of metals in plants and sludge were within permissible limits when compared to their respective standards. Metal distribution was in the following order; sludge > plants > wastewater and the concentration of metals varied according to the distance from the source with no specific pattern. Sludge samples for all sites showed a high concentration of metals as compared to plants and wastewater samples. In grass samples, Zn was highest and Cd was low for all sites. Metals accumulation in plants was in order of; roots > shoot. Pearson\'s coefficient correlation showed that Cr in plant roots and Zn in shoots showed significantly high correlation with Cd in sludge while Pb in roots showed significant negative correlation with Zn in sludge. BCF values for Cr, Pb and Zn were >1, showing the phytoremediation potential of plants.
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  • 文章类型: Journal Article
    背景:在约30%的特发性急性胰腺炎(IAP)患者中检测到胆道微石症/污泥。由于可以预防复发性胆源性胰腺炎,应确定IAP的潜在病因.
    目的:开发一种基于机器学习(ML)的决策工具,用于在胰腺炎患者中使用内窥镜检查(EUS)来检测污泥和微石症。
    方法:我们回顾性地使用2015年至2020年间在我们三级医院收治的218例确诊AP患者的常规记录的临床和实验室参数。未接受EUS作为诊断检查的一部分,其胰腺炎发作可以通过胆泥和微结石以外的其他原因得到充分解释的患者被排除在外。我们使用H2O训练监督ML分类器。AI自动选择最合适的预测模型来预测微石症/污泥。预测模型在来自两个三级护理中心(117名患者)的两个独立回顾性队列中进一步验证。
    结果:确定了入院时记录的28名分类患者的变量,以计算预测模型的准确性为0.84[95%置信区间(CI):0.791-0.9185],在识别队列(218例患者)中,阳性预测值为0.84,阴性预测值为0.80.在验证队列中,该预测模型的稳健性得到了证实,准确率为0.76(95CI:0.673-0.8347),阳性预测值为0.76,阴性预测值为0.78(117例)。
    结论:我们提出了一个强大且经过验证的基于ML的预测模型,该模型由入院时常规记录的参数组成,可以预测胆泥和微结石是AP的原因。
    BACKGROUND: Biliary microlithiasis/sludge is detected in approximately 30% of patients with idiopathic acute pancreatitis (IAP). As recurrent biliary pancreatitis can be prevented, the underlying aetiology of IAP should be established.
    OBJECTIVE: To develop a machine learning (ML) based decision tool for the use of endosonography (EUS) in pancreatitis patients to detect sludge and microlithiasis.
    METHODS: We retrospectively used routinely recorded clinical and laboratory parameters of 218 consecutive patients with confirmed AP admitted to our tertiary care hospital between 2015 and 2020. Patients who did not receive EUS as part of the diagnostic work-up and whose pancreatitis episode could be adequately explained by other causes than biliary sludge and microlithiasis were excluded. We trained supervised ML classifiers using H2O.ai automatically selecting the best suitable predictor model to predict microlithiasis/sludge. The predictor model was further validated in two independent retrospective cohorts from two tertiary care centers (117 patients).
    RESULTS: Twenty-eight categorized patients\' variables recorded at admission were identified to compute the predictor model with an accuracy of 0.84 [95% confidence interval (CI): 0.791-0.9185], positive predictive value of 0.84, and negative predictive value of 0.80 in the identification cohort (218 patients). In the validation cohort, the robustness of the prediction model was confirmed with an accuracy of 0.76 (95%CI: 0.673-0.8347), positive predictive value of 0.76, and negative predictive value of 0.78 (117 patients).
    CONCLUSIONS: We present a robust and validated ML-based predictor model consisting of routinely recorded parameters at admission that can predict biliary sludge and microlithiasis as the cause of AP.
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  • 文章类型: Journal Article
    微生物燃料电池(MFC)是一种生物电能发生器,它使用呼吸微生物将污泥中存在的有机物转化为电能。这项工作的主要目标是为绿色发电技术引入一种新方法。在这种情况下,从El-SheikhZayed净水厂收集的污泥样品中回收了总共6种细菌分离物,埃及,并筛选了它们的电势。根据16SrRNA测序鉴定出最有希望的分离株为大肠杆菌和阴沟肠杆菌,在优化的pH值(7.5)下,在财团中使用它们取得了有希望的结果,温度(30°C)和底物(葡萄糖/丙酮酸1%)。低水平红色激光(λ=632.8nm,8mW)用于提高细菌聚生体的产电效率,最大生长在210秒的暴露间隔达到。在向基于污泥的MFC中添加光刺激细菌财团的标准接种物(107cfu/mL)的应用中,记录了输出电位差值的显着增加。发电是通过定期供应外部基板来维持的。这些结果表明了MFC在可再生能源生产和污泥回收中的双重作用的未来发展。
    Microbial fuel cell (MFC) is a bio-electrical energy generator that uses respiring microbes to transform organic matter present in sludge into electrical energy. The primary goal of this work was to introduce a new approach to the green electricity generation technology. In this context a total of 6 bacterial isolates were recovered from sludge samples collected from El-Sheikh Zayed water purification plant, Egypt, and screened for their electrogenic potential. The most promising isolates were identified according to 16S rRNA sequencing as Escherichia coli and Enterobacter cloacae, promising results were achieved on using them in consortium at optimized values of pH (7.5), temperature (30°C) and substrate (glucose/pyruvate 1%). Low level red laser (λ = 632.8nm, 8mW) was utilized to promote the electrogenic efficiency of the bacterial consortium, maximum growth was attained at 210 sec exposure interval. In an application of adding standard inoculum (107 cfu/mL) of the photo-stimulated bacterial consortium to sludge based MFC a significant increase in the output potential difference values were recorded, the electricity generation was maintained by regular supply of external substrate. These results demonstrate the future development of the dual role of MFCs in renewable energy production and sludge recycling.
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  • 文章类型: Journal Article
    现代工业工厂操作通常需要储油罐中的液位接口的测量系统。各项先进水平指标基本满足需求,但这些可能不是在线状态,并且由于底罐中的沉淀而不太准确。被称为石油烃复合乳液的沉降或污泥,含有分配过程中产生的水和固体颗粒,storage,甚至生产。中子反向散射技术可以通过从壁外部测量污泥水平来帮助罐或容器的维护系统。本文提出了一种识别原油存储系统中两种材料之间界面的非侵入性方法。具有活性1Ci(Ci)的快速中子源(241Am-Be)和便携式后向散射中子探测器用于储罐测量。储罐的外径(OD)为34m,高度为11m。每个位置的时间测量为2s,从0m到11m。慢中子强度可以与化合物内部的氢浓度相关。污泥和油之间的界面在距离底板27cm处被识别。该方法具有用于炼油厂设施中污泥的无损测量的潜力。
    Modern industrial plant operations commonly necessitate a measurement system of the liquids level interface in the oil storage tank. Various advanced-level indicators almost meet the demand, but these may not be in online condition and are less accurate due to sedimentation in the bottom tank. Sedimentation or sludge known as a petroleum hydrocarbons complex emulsion, contained water and solid particles generated during distribution, storage, or even production. The neutron backscatter technique can help the maintenance system of the tank or vessel by measuring sludge levels from outside the wall. This paper presents a non-intrusive method for identifying the interface between two materials in the crude oil storage system. A fast neutron source (241Am-Be) with activity 1 Ci (Ci) and a portable backscattering neutron detector are used for storage tank measurement. The storage tank has an outer diameter (OD) of 34 m and a height of 11 m. Time measurement is 2 s for each position, starting from 0 m to 11 m. The slow neutron intensity can be correlated to the hydrogen concentration inside chemical compounds. The interface between sludge and oil is identified at 27 cm from the bottom plate. The method has the potential for non-destructive measurement of sludge in a refinery facility.
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  • 文章类型: Journal Article
    这项研究旨在比较显微镜计数,文化,和定量或实时PCR(qPCR)来定量环境和工程污泥样品中的硫酸盐还原菌。最初测试了四组扩增编码硫酸盐还原途径的两种关键酶的dsrA和apsA基因的引物。使用来自SRB悬浮液的基因组DNA和富集的硫酸盐还原污泥的稀释液构建qPCR标准曲线。根据特异性和可重复性,DSR1F/RH3-dsr-R引物组确保了基于dsrA基因扩增的良好定量;然而,在环境和硫酸盐减少污泥样品中,低和高水平的SRB浓度表现出不一致。最终,我们对dsrA基因拷贝进行了归一化的qPCR方法,使用合成的双链DNA片段作为校准物。该方法符合所有验证标准,并被证明是具体的,准确,和精确。通过培养方法对代谢活跃的SRB种群的计数与dsrA基因拷贝不同,但显示出合理的正相关。相反,由于区分密集的集群生物,微观计数有局限性,影响精度。因此,这项研究证明,以dsrA基因拷贝作为校准物优化的基于qPCR的方法是工程和环境污泥样品中SRB种群绝对计数的灵敏分子工具。
    This study aimed to compare microscopic counting, culture, and quantitative or real-time PCR (qPCR) to quantify sulfate-reducing bacteria in environmental and engineered sludge samples. Four sets of primers that amplified the dsrA and apsA gene encoding the two key enzymes of the sulfate-reduction pathway were initially tested. qPCR standard curves were constructed using genomic DNA from an SRB suspension and dilutions of an enriched sulfate-reducing sludge. According to specificity and reproducibility, the DSR1F/RH3-dsr-R primer set ensured a good quantification based on dsrA gene amplification; however, it exhibited inconsistencies at low and high levels of SRB concentrations in environmental and sulfate-reducing sludge samples. Ultimately, we conducted a qPCR method normalized to dsrA gene copies, using a synthetic double-stranded DNA fragment as a calibrator. This method fulfilled all validation criteria and proved to be specific, accurate, and precise. The enumeration of metabolically active SRB populations through culture methods differed from dsrA gene copies but showed a plausible positive correlation. Conversely, microscopic counting had limitations due to distinguishing densely clustered organisms, impacting precision. Hence, this study proves that a qPCR-based method optimized with dsrA gene copies as a calibrator is a sensitive molecular tool for the absolute enumeration of SRB populations in engineered and environmental sludge samples.
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