Rho GTPases

Rho GTPases
  • 文章类型: Journal Article
    真核细胞治愈伤口,对免疫信号做出反应,或转移,他们必须迁移,通常通过粘附到细胞外基质(ECM)。细胞还可以沉积ECM成分,留下影响他们爬行的脚印。最近的实验表明,微图案化的粘附条纹上的一些上皮细胞系在它们以前爬过的区域中持续移动,形成足迹的地方,但几乎没有进入未开发的区域,产生振幅增加的振荡迁移。这里,我们通过数学建模探索足迹沉积和细胞对足迹的反应如何结合起来,使细胞产生振荡和其他复杂的迁移运动。我们用相场模型与细胞极性的生化模型耦合来模拟细胞爬行,假设局部接触沉积的足迹激活Rac1,一种建立细胞前沿的蛋白质。根据足迹沉积速率和对足迹的响应,微图案线上的细胞可以显示许多类型的运动性,包括密闭的,振荡,和持续的运动。在二维(2D)衬底上,我们预测细胞发生圆周运动和细胞发生探索性表型之间的转变。细胞与其足迹相互作用的微小定量变化可以完全改变探索,允许细胞严格地调节它们的运动,导致不同的运动表型(局限与探索性)在不同的细胞中沉积或感知是可变的。与我们的计算预测一致,我们在早期的实验数据中发现了细胞经历循环和探索性运动的证据。
    For eukaryotic cells to heal wounds, respond to immune signals, or metastasize, they must migrate, often by adhering to extracellular matrix (ECM). Cells may also deposit ECM components, leaving behind a footprint that influences their crawling. Recent experiments showed that some epithelial cell lines on micropatterned adhesive stripes move persistently in regions they have previously crawled over, where footprints have been formed, but barely advance into unexplored regions, creating an oscillatory migration of increasing amplitude. Here, we explore through mathematical modeling how footprint deposition and cell responses to footprint combine to allow cells to develop oscillation and other complex migratory motions. We simulate cell crawling with a phase field model coupled to a biochemical model of cell polarity, assuming local contact with the deposited footprint activates Rac1, a protein that establishes the cell\'s front. Depending on footprint deposition rate and response to the footprint, cells on micropatterned lines can display many types of motility, including confined, oscillatory, and persistent motion. On two-dimensional (2D) substrates, we predict a transition between cells undergoing circular motion and cells developing an exploratory phenotype. Small quantitative changes in a cell\'s interaction with its footprint can completely alter exploration, allowing cells to tightly regulate their motion, leading to different motility phenotypes (confined vs. exploratory) in different cells when deposition or sensing is variable from cell to cell. Consistent with our computational predictions, we find in earlier experimental data evidence of cells undergoing both circular and exploratory motion.
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  • 文章类型: Journal Article
    磷酸肌醇3-激酶(PI3K)β(PI3Kβ)在功能上具有独特的整合来自受体酪氨酸激酶(RTK)的信号的能力,G蛋白偶联受体,和Rho家族GTPases。PI3Kβ优先考虑与各种膜束缚信号输入的相互作用的机制,然而,尚不清楚。先前的实验没有确定与膜束缚蛋白的相互作用是否主要控制PI3Kβ定位而不是直接调节脂质激酶活性。为了解决我们知识的差距,我们建立了一种检测方法,可以直接观察三种不同的蛋白质相互作用如何调节PI3Kβ,当PI3Kβ以生物学相关的构型在支持的脂质双层上呈现给激酶时.使用单分子全内反射荧光(TIRF)显微镜,我们确定了控制PI3Kβ膜定位的机制,信令输入的优先级排序,和脂质激酶激活。我们发现,在参与GβGγ或Rac1(GTP)之前,自抑制的PI3Kβ优先考虑与RTK衍生的酪氨酸磷酸化(pY)肽的相互作用。尽管pY肽强烈地将PI3Kβ定位于膜上,脂质激酶活性的刺激是适度的。在存在pY/GβGγ或pY/Rac1(GTP)的情况下,PI3Kβ活性显著增强,超出了简单增加膜定位所能解释的范围。相反,PI3Kβ通过与变构调节一致的机制被pY/GβGγ和pY/Rac1(GTP)协同激活。
    Phosphoinositide 3-kinase (PI3K) beta (PI3Kβ) is functionally unique in the ability to integrate signals derived from receptor tyrosine kinases (RTKs), G-protein coupled receptors, and Rho-family GTPases. The mechanism by which PI3Kβ prioritizes interactions with various membrane-tethered signaling inputs, however, remains unclear. Previous experiments did not determine whether interactions with membrane-tethered proteins primarily control PI3Kβ localization versus directly modulate lipid kinase activity. To address this gap in our knowledge, we established an assay to directly visualize how three distinct protein interactions regulate PI3Kβ when presented to the kinase in a biologically relevant configuration on supported lipid bilayers. Using single molecule Total Internal Reflection Fluorescence (TIRF) Microscopy, we determined the mechanism controlling PI3Kβ membrane localization, prioritization of signaling inputs, and lipid kinase activation. We find that auto-inhibited PI3Kβ prioritizes interactions with RTK-derived tyrosine phosphorylated (pY) peptides before engaging either GβGγ or Rac1(GTP). Although pY peptides strongly localize PI3Kβ to membranes, stimulation of lipid kinase activity is modest. In the presence of either pY/GβGγ or pY/Rac1(GTP), PI3Kβ activity is dramatically enhanced beyond what can be explained by simply increasing membrane localization. Instead, PI3Kβ is synergistically activated by pY/GβGγ and pY/Rac1 (GTP) through a mechanism consistent with allosteric regulation.
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  • 文章类型: Journal Article
    细菌毒素或效应蛋白对靶蛋白的单-O-糖基化是细菌干扰宿主细胞基本功能的公知机制。相应的糖基转移酶是重要的毒力因子,例如艰难梭菌毒素A和B。我们描述了耶尔森氏菌的两种具有高度序列同一性的糖基转移酶:来自人畜共患病原体小肠结肠炎耶尔森氏菌的YeGT和来自鼠病原体耶尔森氏菌的YkGT。我们表明,两者都通过在酪氨酸残基(RhoA中的Tyr-34)上连接N-乙酰葡糖胺(GlcNAc)来修饰Rho家族蛋白。值得注意的是,这些酶的靶蛋白特异性不同。虽然YeGT修改了RhoA,B和C,YkGT具有更宽的底物谱,不仅可以糖基化Rho,还可以糖基化Rac和Cdc42亚家族蛋白。诱变研究表明,残基177对于该更宽的目标谱是重要的。我们确定了YeGT在无配体状态下缩短了16个N末端残基(sYeGT)并与UDP结合的晶体结构,底物水解的产物。该结构将sYeGT分配给GT-A家族。它与来自毒素的糖基转移酶结构域具有高度的结构相似性。我们还证明,YeGT和YkGT的16个最N末端残基对于使用炭疽毒素的成孔保护性抗原介导的易位到宿主细胞中很重要。介导的引入Hela细胞或YeGT和YkGT的异位表达引起肌动蛋白细胞骨架的形态变化和重新分布。数据表明YeGT和YkGT可能是属于酪氨酸糖基化细菌糖基转移酶家族的细菌效应物。
    Mono-O-glycosylation of target proteins by bacterial toxins or effector proteins is a well-known mechanism by which bacteria interfere with essential functions of host cells. The respective glycosyltransferases are important virulence factors such as the Clostridioides difficile toxins A and B. Here, we describe two glycosyltransferases of Yersinia species that have a high sequence identity: YeGT from the zoonotic pathogen Yersinia enterocolitica and YkGT from the murine pathogen Yersinia kristensenii. We show that both modify Rho family proteins by attachment of GlcNAc at tyrosine residues (Tyr-34 in RhoA). Notably, the enzymes differed in their target protein specificity. While YeGT modified RhoA, B, and C, YkGT possessed a broader substrate spectrum and glycosylated not only Rho but also Rac and Cdc42 subfamily proteins. Mutagenesis studies indicated that residue 177 is important for this broader target spectrum. We determined the crystal structure of YeGT shortened by 16 residues N terminally (sYeGT) in the ligand-free state and bound to UDP, the product of substrate hydrolysis. The structure assigns sYeGT to the GT-A family. It shares high structural similarity to glycosyltransferase domains from toxins. We also demonstrated that the 16 most N-terminal residues of YeGT and YkGT are important for the mediated translocation into the host cell using the pore-forming protective antigen of anthrax toxin. Mediated introduction into HeLa cells or ectopic expression of YeGT and YkGT caused morphological changes and redistribution of the actin cytoskeleton. The data suggest that YeGT and YkGT are likely bacterial effectors belonging to the family of tyrosine glycosylating bacterial glycosyltransferases.
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  • 文章类型: Journal Article
    背景:淋巴管生成,淋巴管的形成,与静脉血管的发育密切相关,在细胞和分子水平。这里,我们确定了Sorbs1的新作用,Sorbs1是SoHo家族细胞骨架衔接蛋白的创始成员,斑马鱼的血管和淋巴发育。
    结果:我们表明,Sorbs1是继发性发芽和特异性衍生自轴向静脉的几种血管结构的出现所必需的。最值得注意的是,前体伞状淋巴结构的形成在sorbs1突变胚胎中受到影响,严重影响躯干淋巴管网络的建立。有趣的是,我们表明Sorbs1与BMP通路相互作用,并且可以在Vegfc信号传导之外发挥作用。机械上,Sorbs1控制FAK/Src信号传导,并随后影响由Rac1和RhoAGTP酶调节的细胞骨架过程。Sorbs1失活改变的细胞-细胞外基质(ECM)接触重排和细胞骨架动力学,导致内皮细胞迁移和粘附特性的特定缺陷。
    结论:总体而言,使用体外和体内试验,我们确定Sorbs1是静脉和淋巴管血管生成的重要调节因子,与Vegfc信号轴无关.这些结果提供了对背景特异性血管和淋巴发育中发现的复杂性的更好理解。
    BACKGROUND: Lymphangiogenesis, the formation of lymphatic vessels, is tightly linked to the development of the venous vasculature, both at the cellular and molecular levels. Here, we identify a novel role for Sorbs1, the founding member of the SoHo family of cytoskeleton adaptor proteins, in vascular and lymphatic development in the zebrafish.
    RESULTS: We show that Sorbs1 is required for secondary sprouting and emergence of several vascular structures specifically derived from the axial vein. Most notably, formation of the precursor parachordal lymphatic structures is affected in sorbs1 mutant embryos, severely impacting the establishment of the trunk lymphatic vessel network. Interestingly, we show that Sorbs1 interacts with the BMP pathway and could function outside of Vegfc signaling. Mechanistically, Sorbs1 controls FAK/Src signaling and subsequently impacts on the cytoskeleton processes regulated by Rac1 and RhoA GTPases. Inactivation of Sorbs1 altered cell-extracellular matrix (ECM) contacts rearrangement and cytoskeleton dynamics, leading to specific defects in endothelial cell migratory and adhesive properties.
    CONCLUSIONS: Overall, using in vitro and in vivo assays, we identify Sorbs1 as an important regulator of venous and lymphatic angiogenesis independently of the Vegfc signaling axis. These results provide a better understanding of the complexity found within context-specific vascular and lymphatic development.
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  • 文章类型: Journal Article
    AnithiactinD(1),2-苯基噻唑类天然产物,是从海洋泥滩衍生的放线菌链霉菌中分离出来的。10A085.基于NMR和MS数据的解释阐明1的化学结构。通过比较实验和计算的电子圆二色性(ECD)光谱数据来确定1的绝对构型。AnithiactinD(1)通过下调A549,AGS中的上皮-间质转化(EMT)标志物,在5μM的浓度下显着降低了癌细胞的迁移和侵袭活性,和Caco-2细胞系。此外,1抑制RhoGTPases的活性,包括A549细胞系中的Rac1和RhoA,在AGS和Caco-2细胞系中抑制RhoA,并降低了AGS和Caco-2细胞系中某些基质金属蛋白酶(MMPs)的mRNA表达水平。因此,1是具有独特的苯胺-吲哚稠合部分的2-苯基噻唑类天然产物的新实体,是癌细胞运动性的有效抑制剂。
    Anithiactin D (1), a 2-phenylthiazole class of natural products, was isolated from marine mudflat-derived actinomycetes Streptomyces sp. 10A085. The chemical structure of 1 was elucidated based on the interpretation of NMR and MS data. The absolute configuration of 1 was determined by comparing the experimental and calculated electronic circular dichroism (ECD) spectral data. Anithiactin D (1) significantly decreased cancer cell migration and invasion activities at a concentration of 5 μM via downregulation of the epithelial-to-mesenchymal transition (EMT) markers in A549, AGS, and Caco-2 cell lines. Moreover, 1 inhibited the activity of Rho GTPases, including Rac1 and RhoA in the A549 cell line, suppressed RhoA in AGS and Caco-2 cell lines, and decreased the mRNA expression levels of some matrix metalloproteinases (MMPs) in AGS and Caco-2 cell lines. Thus 1, which is a new entity of the 2-phenylthiazole class of natural products with a unique aniline-indole fused moiety, is a potent inhibitor of the motility of cancer cells.
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  • 文章类型: Journal Article
    VAV2是RHOGTP酶的激活剂,可促进和维持正常角质形成细胞和口腔鳞状细胞癌(OSCC)细胞的再生增殖样状态。这里,我们证明VAV2还调节这些细胞中的核糖体生物发生,与人乳头瘤病毒阴性(HPV-)OSCC患者预后不良相关的项目。机械上,VAV2使用包含RAC1和RHOAGTP酶的保守途径以催化依赖性方式调节该过程,PAK和ROCK家族激酶,以及c-MYC和YAP/TAZ转录因子。该途径直接促进RNA聚合酶I活性和47S前rRNA前体的合成。核糖体生物发生因子的上调和YAP/TAZ依赖性未分化细胞状态的获得进一步巩固了该过程。最后,我们显示RNA聚合酶I是角质形成细胞和OSCC患者来源的细胞的治疗性致命弱点,具有高VAV2催化活性。总的来说,这些发现强调了在OSCC的肿瘤前期和晚期进展阶段调节VAV2和核糖体生物发生途径的治疗潜力.
    VAV2 is an activator of RHO GTPases that promotes and maintains regenerative proliferation-like states in normal keratinocytes and oral squamous cell carcinoma (OSCC) cells. Here, we demonstrate that VAV2 also regulates ribosome biogenesis in those cells, a program associated with poor prognosis of human papilloma virus-negative (HPV-) OSCC patients. Mechanistically, VAV2 regulates this process in a catalysis-dependent manner using a conserved pathway comprising the RAC1 and RHOA GTPases, the PAK and ROCK family kinases, and the c-MYC and YAP/TAZ transcription factors. This pathway directly promotes RNA polymerase I activity and synthesis of 47S pre-rRNA precursors. This process is further consolidated by the upregulation of ribosome biogenesis factors and the acquisition of the YAP/TAZ-dependent undifferentiated cell state. Finally, we show that RNA polymerase I is a therapeutic Achilles\' heel for both keratinocytes and OSCC patient-derived cells endowed with high VAV2 catalytic activity. Collectively, these findings highlight the therapeutic potential of modulating VAV2 and the ribosome biogenesis pathways in both preneoplastic and late progression stages of OSCC.
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  • 文章类型: Review
    RhoU和RhoV是包含它们自己的亚家族的小GTP酶的Rho家族的成员。RhoUVGTP酶由于其GTP/GDP结合循环的动力学而被分类为非典型的。它们还具有调节其亚细胞定位和活性的独特N-和C-末端。RhoU和RhoV与细胞骨架调节有关,细胞粘附,和细胞迁移。它们在胚胎发育和癌症转移等疾病期间均表现出不同的表达模式。表明它们有专门的功能。在这次审查中,我们将讨论RhoU和RhoV的已知函数,专注于他们在早期发展中的角色,器官发生,和疾病。
    RhoU and RhoV are members of the Rho family of small GTPases that comprise their own subfamily. RhoUV GTPases are classified as atypical due to the kinetics of their GTP/GDP binding cycles. They also possess unique N- and C-termini that regulate their subcellular localization and activity. RhoU and RhoV have been linked to cytoskeletal regulation, cell adhesion, and cell migration. They each exhibit distinct expression patterns during embryonic development and diseases such as cancer metastasis, suggesting they have specialized functions. In this review, we will discuss the known functions of RhoU and RhoV, with a focus on their roles in early development, organogenesis, and disease.
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  • 文章类型: Journal Article
    背景:新的证据表明RhoGTP酶在肿瘤发生和转移中起着至关重要的作用,但是它们参与肿瘤微环境(TME)和肝细胞癌(HCC)的预后尚不清楚。
    方法:我们的目标是使用RhoGTPase信号传导基因和进一步的生物信息学分析,开发一种称为RhoGTPases相关基因评分(RGPRG评分)的肿瘤预后预测系统。
    结果:我们的工作发现,与RGPRG评分较低的HCC患者相比,RGPRG评分较高的HCC患者的生存率明显更差,免疫抑制细胞分数增加。单细胞队列分析显示,RGPRG评分较低的患者存在免疫活性TME,通过MIF信号网络加强从T/NK细胞到其他细胞的通信。针对TME中的这些改变,在免疫治疗队列中,RGPRG评分高的患者的免疫治疗结局更差,生存时间缩短.此外,在其他27种癌症中,发现RGPRG评分与生存率相关.体外实验证实,击倒关键的RhoGTP酶信号生物标志物SFN显著抑制HCC细胞增殖,入侵,和移民。
    结论:这项研究为RhoGTPase基因模式在整体序列和单细胞水平的TME特征和临床应用提供了新的见解,这可能有助于指导肝癌的个性化治疗和改善临床预后。
    Emerging evidence suggests that Rho GTPases play a crucial role in tumorigenesis and metastasis, but their involvement in the tumor microenvironment (TME) and prognosis of hepatocellular carcinoma (HCC) is not well understood.
    We aim to develop a tumor prognosis prediction system called the Rho GTPases-related gene score (RGPRG score) using Rho GTPase signaling genes and further bioinformatic analyses.
    Our work found that HCC patients with a high RGPRG score had significantly worse survival and increased immunosuppressive cell fractions compared to those with a low RGPRG score. Single-cell cohort analysis revealed an immune-active TME in patients with a low RGPRG score, with strengthened communication from T/NK cells to other cells through MIF signaling networks. Targeting these alterations in TME, the patients with high RGPRG score have worse immunotherapeutic outcomes and decreased survival time in the immunotherapy cohort. Moreover, the RGPRG score was found to be correlated with survival in 27 other cancers. In vitro experiments confirmed that knockdown of the key Rho GTPase-signaling biomarker SFN significantly inhibited HCC cell proliferation, invasion, and migration.
    This study provides new insight into the TME features and clinical use of Rho GTPase gene pattern at the bulk-seq and single-cell level, which may contribute to guiding personalized treatment and improving clinical outcome in HCC.
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  • 文章类型: Journal Article
    RhoU是小G蛋白Rho家族的非典型成员,与经典的RhoGTPasesRhoA相比,它具有N端和C端延伸,Rac1和Cdc42,并通过C端棕榈酰化而不是异戊二烯化与膜缔合。RhoUmRNA表达在前列腺癌中上调,被认为是疾病进展的标志。在这里,我们表明前列腺癌细胞中RhoU过表达增加了细胞迁移和侵袭。为了确定有助于其功能的RhoU靶标,我们发现RhoU在细胞中同源二聚体化。我们将参与这种相互作用的区域映射到C末端延伸,并显示C末端棕榈酰化是自缔合所必需的。分离的C-末端延伸的表达减少了RhoU诱导的PAKs活化,它们是RhoU已知的下游目标,并诱导与抑制RhoU功能一致的细胞形态变化。我们的研究结果首次表明,一个Rho家族成员的活动是通过自我联想来刺激的,这对它的活动很重要。
    RhoU is an atypical member of the Rho family of small G-proteins, which has N- and C-terminal extensions compared to the classic Rho GTPases RhoA, Rac1 and Cdc42, and associates with membranes through C-terminal palmitoylation rather than prenylation. RhoU mRNA expression is upregulated in prostate cancer and is considered a marker for disease progression. Here, we show that RhoU overexpression in prostate cancer cells increases cell migration and invasion. To identify RhoU targets that contribute to its function, we found that RhoU homodimerizes in cells. We map the region involved in this interaction to the C-terminal extension and show that C-terminal palmitoylation is required for self-association. Expression of the isolated C-terminal extension reduces RhoU-induced activation of p21-activated kinases (PAKs), which are known downstream targets for RhoU, and induces cell morphological changes consistent with inhibiting RhoU function. Our results show for the first time that the activity of a Rho family member is stimulated by self-association, and this is important for its activity.
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  • 文章类型: Journal Article
    细胞外基质(ECM)的重塑是癌症进展的关键标志。ECM重塑的关键组成部分是ECM蛋白纤连蛋白(FN)组装成不溶性原纤维,它提供了一个支架,用于侵入血管内皮细胞和逃避癌细胞,以及胶原蛋白沉积和致癌细胞因子连接的框架。转化生长因子-β1(TGF-β1)诱导FN原纤维组装,最初被确定为在恶性转化中的作用。外源性TGF-β1的添加驱动FN原纤维组装,同时也上调内源性TGF-β1表达和自分泌信号传导。在目前的研究中,我们试图确定自分泌TGF-β1信号是否在MCF10A乳腺上皮细胞的FN原纤维形成中起作用,其行为类似于健康的上皮,或恶性MDA-MB-231乳腺癌细胞。我们的结果显示了两个有趣的发现:第一,恶性MDA-MB-231细胞将较少的FN组装成原纤维,尽管表达和分泌更多可溶性FN;第二,自分泌TGF-β1信号是MCF10A上皮细胞中FN原纤维形成所必需的,即使在外源性的存在下,活性TGF-β1。这表明自分泌TGF-β1通过来自活性外源性TGF-β1的不同途径进行信号传导。我们假设这种信号是由TGF-β1潜伏期相关肽(LAP)和αv整合素之间的相互作用介导的;用可溶性LAP孵育MCF10As,即使在没有活性TGF-β1配体的情况下,部分回收的FN原纤维组件。一起来看,这些数据表明自分泌TGF-β1在FN原纤维组装中起关键作用,这种相互作用是由LAP-整合素信号介导的。
    Remodeling of the extracellular matrix (ECM) is a key hallmark of cancer progression. A critical component of ECM remodeling is the assembly of the glycoprotein fibronectin (FN) into insoluble fibrils, which provide a scaffold for invading vascular endothelial cells and escaping cancer cells, as well as a framework for collagen deposition and oncogenic cytokine tethering. FN fibril assembly is induced by Transforming Growth Factor-β1 (TGF-β1), which was originally identified for its role in malignant transformation. Addition of exogenous TGF-β1 drives FN fibril assembly while also upregulating endogenous TGF-β1 expression and autocrine signaling. In the current study, we sought to determine if autocrine TGF-β1 signaling plays a role in FN fibril formation in either MCF10A mammary epithelial cells, which behave similarly to healthy epithelia, or malignant MDA- MB-231 breast cancer cells. Our results show two interesting findings: first, malignant MDA-MB- 231 cells assemble less FN into fibrils, despite expressing and secreting more soluble FN; second, autocrine TGF-β1 signaling is required for FN fibril formation in MCF10A epithelial cells, even in the presence of exogenous, active TGF-β1. This suggests that autocrine TGF-β1 is signaling through distinct pathways from active exogenous TGF-β1. We hypothesized that this signaling was mediated by interactions between the TGF-β1 latency associated peptide (LAP) and αv integrins; indeed, incubating MCF10As with soluble LAP, even in the absence of the active TGF-β1 ligand, partially recovered FN fibril assembly. Taken together, these data suggests that autocrine TGF-β1 plays a critical role in FN fibril assembly, and this interaction is mediated by LAP-integrin signaling.
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