Pyropia haitanensis

  • 文章类型: Journal Article
    Bangiales代表了红藻中的一个古老谱系,其特征是生活史,具有从二倍体到单倍体的特殊过渡阶段,称为孢子孢子囊阶段。然而,通过环境条件的变化来控制此阶段启动的监管机制尚未得到很好的理解。本研究分析了孢子囊发育过程中植物激素和H2O2含量的变化。它还通过转录组分析比较了囊孢子囊早期发育中的基因表达变化。研究结果表明,H2O2被证明是启动海底鱼从conchocelis到结孢子囊过渡的关键信号。植物激素分析显示,1-氨基环丙烷-1-羧酸(ACC)水平显着增加,同时发现环境条件的变化可以促进H2O2的快速释放。H2O2诱导导致孢子囊发育,和ACC增强了H2O2的产生和孢子孢子的发育。NADPH氧化酶抑制剂二亚苯基碘鎓和H2O2清除剂N抑制了这种促进作用,N'-二甲基硫脲。通过调节参与H2O2产生和清除的酶的活性和转录水平来维持氧化-抗氧化机制的平衡。转录组分析结合酶和转录水平变化的评估显示,在诱导成熟的条件下,蛋白质和糖合成的上调以及能量供应的调节,发现外源性ACC增强了整个过程。总的来说,这项研究表明,ACC增强了H2O2对生命周期转换的促进作用,该生命周期转换负责从营养性头孢子囊到减数分裂之前的头孢子囊阶段的过渡。
    The Bangiales represent an ancient lineage within red algae that are characterized by a life history featuring a special transitional stage from diploid to haploid known as the conchosporangia stage. However, the regulatory mechanisms governing the initiation of this stage by changes in environmental conditions are not well understood. This study analyzed the changes in phytohormones and H2O2 content during the development of conchosporangia. It also compared the gene expression changes in the early development of conchosporangia through transcriptome analysis. The findings revealed that H2O2 was shown to be the key signal initiating the transition from conchocelis to conchosporangia in Pyropia haitanensis. Phytohormone analysis showed a significant increase in 1-aminocylopropane-1-carboxylic acid (ACC) levels during conchosporangia maturation, while changes in environmental conditions were found to promote the rapid release of H2O2. H2O2 induction led to conchosporangia development, and ACC enhanced both H2O2 production and conchosporangia development. This promotive effect was inhibited by the NADPH oxidase inhibitor diphenylene iodonium and the H2O2 scavenger N, N\'-dimethylthiourea. The balance of oxidative-antioxidative mechanisms was maintained by regulating the activities and transcriptional levels of enzymes involved in H2O2 production and scavenging. Transcriptome analysis in conjunction with evaluation of enzyme and transcription level changes revealed upregulation of protein and sugar synthesis along with modulation of energy supply under the conditions that induced maturation, and exogenous ACC was found to enhance the entire process. Overall, this study demonstrates that ACC enhances H2O2 promotion of the life cycle switch responsible for the transition from a vegetative conchocelis to a meiosis-preceding conchosporangia stage in Bangiales species.
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  • 文章类型: Journal Article
    Pyropia是全球经济上重要的可食用红藻。近几十年来,水产养殖业和Pyropia的产量大幅增长。微生物群落栖息在藻类表面并产生可影响宿主适应的各种化合物。以前对Pyropia微生物组的研究集中在微生物成分或特定微生物谱系的功能上,它经常排除代谢信息,只占整个社区的一小部分。这里,我们进行了以基因组为中心的分析,以研究海山梨藻的代谢潜力。我们重建了202个独特的宏基因组组装的基因组(MAG),其中包含了海丹疟原虫微生物组中存在的所有主要分类群。将MAG添加到包含所有与Pyropia相关的公开微生物的基因组树中,使细菌内的系统发育多样性增加了50%。MAG的代谢重建显示出跨分类单元的功能冗余,包括硝酸盐还原,牛磺酸代谢,有机磷,和1-氨基环丙烷-1-羧酸盐降解,生长素,和维生素B12的合成。一些微生物的功能,如生长素和维生素B12的合成,以前分配给一些与Pyropia相关的微生物的微生物分布在不同的附生类群中。其他代谢途径,如氨氧化,反硝化,和硫化物氧化,仅限于特定的梯形分类群。
    Pyropia is an economically important edible red alga worldwide. The aquaculture industry and Pyropia production have grown considerably in recent decades. Microbial communities inhabit the algal surface and produce a variety of compounds that can influence host adaptation. Previous studies on the Pyropia microbiome were focused on the microbial components or the function of specific microbial lineages, which frequently exclude metabolic information and contained only a small fraction of the overall community. Here, we performed a genome-centric analysis to study the metabolic potential of the Pyropia haitanensis phycosphere bacteria. We reconstructed 202 unique metagenome-assembled genomes (MAGs) comprising all major taxa present within the P. haitanensis microbiome. The addition of MAGs to the genome tree containing all publicly available Pyropia-associated microorganisms increased the phylogenetic diversity by 50% within the bacteria. Metabolic reconstruction of the MAGs showed functional redundancy across taxa for pathways including nitrate reduction, taurine metabolism, organophosphorus, and 1-aminocyclopropane-1-carboxylate degradation, auxin, and vitamin B12 synthesis. Some microbial functions, such as auxin and vitamin B12 synthesis, that were previously assigned to a few Pyropia-associated microorganisms were distributed across the diverse epiphytic taxa. Other metabolic pathways, such as ammonia oxidation, denitrification, and sulfide oxidation, were confined to specific keystone taxa.
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  • 文章类型: Journal Article
    孢子孢子囊的成熟对于Pyropia/Porphyra的产量至关重要。然而,这个过程背后的分子机制知之甚少。在这项研究中,我们选择了两株在孢子囊成熟方面表现出显着差异的海山梨属菌株作为产生RNA-Seq文库的材料。然后,通过进行加权基因共表达网络分析,我们确定了与结孢菌成熟相关的关键分子途径和基因.确定了两个具体模块,包括磷代谢等功能,脂质代谢,和磷脂酰肌醇信号系统。在结孢菌成熟过程中反应积极的hub基因编码二酰甘油激酶(DGK)和磷脂酰肌醇-3-磷酸-5-激酶,参与磷脂酸的合成,脂质代谢的关键组成部分。海丹毕赤酵母的全长DGK序列,命名为PhDGK1,通过cDNA末端的快速扩增获得。保守的基序和系统发育树分析表明,PhDGK1属于DGK集群II。PhDGK1的转录水平在两个菌株的孢子囊成熟期间增加,但增加得更早,和更高的水平,早熟菌株比晚熟菌株。这种基因表达模式与成熟度和色素含量变化的模式一致。这些结果表明,脂质代谢在调节Pyropiaspp的孢子囊成熟中起关键作用。,PhDGK1可能是育种新的早熟菌株的有用分子标记。
    Conchosporangia maturation is crucial for the yield of Pyropia/Porphyra. However, the molecular mechanisms underlying this process are poorly understood. In this study, we selected two strains of Pyropia haitanensis that show significant differences in conchosporangia maturation as materials to produce RNA-Seq libraries. Then, we identified key molecular pathways and genes involved in conchosporangia maturation by conducting a weighted gene co-expression network analysis. Two specific modules were identified, and included functions such as phosphorus metabolism, lipid metabolism, and the phosphatidylinositol signaling system. The hub genes that responded positively during conchosporangia maturation encoded diacylglycerol kinase (DGK) and phosphatidylinositol-3-phosphate-5-kinase, which are involved in the synthesis of phosphatidic acid, a key component of lipid metabolism. A full-length DGK sequence of P. haitanensis, designated as PhDGK1, was obtained by rapid-amplification of cDNA ends. Conserved motif and phylogenetic tree analyses showed that PhDGK1 belongs to DGK Cluster II. The transcript level of PhDGK1 increased during conchosporangia maturation in both strains, but increased earlier, and to higher levels, in the early-maturing strain than in the late-maturing strain. This pattern of gene expression was consistent with the patterns of maturity and changes in pigment contents. These results indicate that lipid metabolism plays a key role in regulating conchosporangia maturation in Pyropia spp., and that PhDGK1 might be a useful molecular marker for breeding new early-maturing strains.
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  • 文章类型: Journal Article
    到目前为止,复杂的有机砷主要在海洋生物中鉴定,表明这些生物在砷生物地球化学循环中起着关键作用,因为海洋环境中磷酸盐含量低,砷浓度相对较高。然而,海洋大型藻类对无机砷的反应仍然未知。在这项研究中,在实验室条件下暴露于砷酸盐[As(V)](0.1、1、10、100μM)或亚砷酸盐[As(III)](0.1、1、10μM)3天。水溶性砷,分析了藻类细胞的脂溶性和细胞残留砷的总浓度。As(V)主要转化为氧-砷糖-磷酸,与其他砷化合物如单甲基化,As(III),脱甲基砷和氧代砷糖-甘油可能是砷糖合成的中间体。当高浓度的As(III)对海丹有毒性时,As(III)进入细胞并转化为毒性较小的有机砷和As(V)。转录组结果显示参与DNA复制的基因,失配修复,基底切除修复,在暴露于10μMAs(V)的藻类细胞中,核苷酸切除修复上调,参与谷胱甘肽代谢和光合作用的多个基因被1μMAs(III)上调。As(V)下调了大量ABC转运体,As(III)上调了10个与ABC转运体相关的基因,表明ABC转运蛋白参与将As(III)转运到藻类细胞的液泡中。这些结果表明,海丹生通过将无机砷转化为有机砷并增强液泡中高毒性As(III)的分离来解毒。
    Up to now, complicated organoarsenicals were mainly identified in marine organisms, suggesting that these organisms play a critical role in arsenic biogeochemical cycling because of low phosphate and relatively high arsenic concentration in the marine environment. However, the response of marine macroalgae to inorganic arsenic remains unknown. In this study, Pyropia haitanensis were exposed to arsenate [As(V)] (0.1, 1, 10, 100 μM) or arsenite [As(III)] (0.1, 1, 10 μM) under laboratory conditions for 3 d. The species of water-soluble arsenic, the total concentration of lipid-soluble and cell residue arsenic of the algae cells was analyzed. As(V) was mainly transformed into oxo-arsenosugar-phosphate, with other arsenic compounds such as monomethylated, As(III), demethylated arsenic and oxo-arsenosugar-glycerol being likely the intermediates of arsenosugar synthesis. When high concentration of As(III) was toxic to P. haitanensis, As(III) entered into the cells and was transformed into less toxic organoarsenicals and As(V). Transcriptome results showed genes involved in DNA replication, mismatch repair, base excision repair, and nucleotide excision repair were up-regulated in the algae cells exposed to 10 μM As(V), and multiple genes involved in glutathione metabolism and photosynthetic were up-regulated by 1 μM As(III). A large number of ABC transporters were down-regulated by As(V) while ten genes related to ABC transporters were up-regulated by As(III), indicating that ABC transporters were involved in transporting As(III) to vacuoles in algae cells. These results indicated that P. haitanensis detoxifies inorganic arsenic via transforming them into organoarsenicals and enhancing the isolation of highly toxic As(III) in vacuoles.
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  • 文章类型: Journal Article
    The blooms of harmful microalgae represent a prominent threat to fisheries, public health, and economies throughout the world. Recent studies have shown that certain macroalgae release allelochemicals that can inhibit the growth of bloom-forming microalgae. In this study, we found that the macroalga Pyropia haitanensis significantly inhibited growth of the harmful bloom-forming microalgae Pseudo-nitzschia pungens and Pseudo-nitzschia multiseries. The inhibitory-effect of the live thali of P. haitanensis was highest, followed by that of dry powder, water-soluble extract, and culture medium filtrate. The Pseudo-nitzschia species died 96 h after exposure to 5-10 g fresh-weight L-1 of P. haitanensis live thalli. Furthermore, an aqueous extract of P. haitanensis suppressed the growth of P. pungens and P. multiseries, thereby indicating that P. haitanensis contains stable allelopathic substances that cause the observed inhibitory-effects. On the basis of these findings, we conclude that the macroalga P. haitanensis would have potential utility in controlling the blooms of Pseudo-nitzschia species.
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  • 文章类型: Journal Article
    从红藻中分离纯化硫酸化半乳聚糖LP-G2,海地足。它是一种支链多糖,平均分子量约为8381Da,由Gal组成,Glc,Gala和Ara.使用IR和NMR光谱法确定LP-G2的结构。它由→4)-β-d-半乳糖→4)-α-1-半乳糖-6-硫酸酯段组成,在α-1-半乳糖的6位取代有β-d-Glc和α-d-半乳糖单元。功能分析显示,LP-G2抑制经典和替代途径的补体激活,CH50值为3.08±0.25mg/mL,AP50值为2.23±0.20mg/mL。分别。通过使用补体成分耗尽的血清的初步机制研究表明,LP-G2选择性地与C1q相互作用,C2、C4和C9。结果表明,LP-G2可能在治疗补体相关疾病方面具有潜在的益处。
    A sulfated galactan LP-G2 was isolated and purified from red alga, Pyropia haitanensis. It was a branched polysaccharide with average molecular weight about 8381 Da, composed of Gal, Glc, GalA and Ara. The structure of LP-G2 was determined using IR and NMR spectroscopy. It was composed of →4)-β-d-galactose→4)-α-l-galactose-6- sulfate segments, with β-d-Glc and α-d-galactose unit substituted at the 6-position of α-l-galactose. Functional analysis showed that LP-G2 inhibited complement activation on both the classic and alternative pathways with CH50 value of 3.08 ± 0.25 mg/mL and AP50 value of 2.23 ± 0.20 mg/mL, respectively. Preliminary mechanism studies by using complement component depleted-sera indicated that LP-G2 selectively interacts with C1q, C2, C4 and C9. The results suggested that LP-G2 could be of potential benefits in treatment of the complement associated diseases.
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  • 文章类型: Journal Article
    An antioxidant polysaccharide, porphyran, from red algae Pyropia haitanensis, is introduced as a protective agent against neurotoxicity-induced amyloid β peptide (Aβ) of Alzheimer\'s disease (AD) mice. Then the activity of acetylcholinesterase (AChE) and choline acetyltransferase (CHAT) in the cortical and hippocampal tissue were examined by colorimetric method. Results showed that porphyran significantly ameliorated the learning and memory impairment induced by Aβ1-40. Biochemical analysis showed that porphyran increased ChAT activity and decreased AChE activity in the cortical and hippocampal tissue. The mechanism may be related with the increase of cerebral acetylcholine content. Porphyran has a potential of developing anti-aging drug.
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  • 文章类型: Journal Article
    BACKGROUND: Pyropia haitanensis, distributes in the intertidal zone, can tolerate water losses exceeding 90%. However, the mechanisms enabling P. haitanensis to survive harsh conditions remain uncharacterized. To elucidate the mechanism underlying P. haitanensis desiccation tolerance, we completed an integrated analysis of its transcriptome and proteome as well as transgenic Chlamydomonas reinhardtii carrying a P. haitanensis gene.
    RESULTS: P. haitanensis rapidly adjusted its physiological activities to compensate for water losses up to 60%, after which, photosynthesis, antioxidant systems, chaperones, and cytoskeleton were activated to response to severe desiccation stress. The integrative analysis suggested that transketolase (TKL) was affected by all desiccation treatments. Transgenic C. reinhardtii cells overexpressed PhTKL grew better than the wild-type cells in response to osmotic stress.
    CONCLUSIONS: P. haitanensis quickly establishes acclimatory homeostasis regarding its transcriptome and proteome to ensure its thalli can recover after being rehydrated. Additionally, PhTKL is vital for P. haitanensis desiccation tolerance. The present data may provide new insights for the breeding of algae and plants exhibiting enhanced desiccation tolerance.
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  • 文章类型: Journal Article
    背景:异侧氟菊糖苷是一种主要的光合产物,已知在几乎所有的红藻中都有助于渗透适应。然而,负责合成Floridoside及其异构形式的编码基因和酶,L-或D-异氟代甙,研究不足。
    结果:这里,四个推定的海藻糖-6-磷酸合成酶(TPS)基因,命名为PhTPS1,PhTPS2,PhTPS3和PhTPS4,是从红色藻类PyropiaHaitanensis(Bangiophyceae)中克隆并表征。推导的氨基酸序列与其他生物体的注释TPS蛋白相似,特别是PhTPS1,2的UDP-半乳糖底物结合位点,它们是高度保守的。其中,PhTPS1,4参与了氟代糖苷和异氟代糖苷的生物合成,主要产品为异氟甲苷。PhTPS3是异氟甲苷磷酸合成酶,而PhTPS2没有活性。当受到干燥的挑战时,高温,和盐胁迫,PhTPS成员的表达程度不同,但是对热应力和干燥的反应更强。
    结论:因此,在海地假单胞菌,PhTPSs编码氟碘苷和异氟碘苷磷酸合酶的酶活性,对于非生物胁迫防御反应至关重要。
    BACKGROUND: The heteroside floridoside is a primary photosynthetic product that is known to contribute to osmotic acclimation in almost all orders of Rhodophyta. However, the encoding genes and enzymes responsible for the synthesis of floridoside and its isomeric form, L- or D-isofloridoside, are poorly studied.
    RESULTS: Here, four putative trehalose-6-phosphate synthase (TPS) genes, designated as PhTPS1, PhTPS2, PhTPS3, and PhTPS4, were cloned and characterized from the red alga Pyropia haitanensis (Bangiophyceae). The deduced amino acid sequence is similar to the annotated TPS proteins of other organisms, especially the UDP-galactose substrate binding sites of PhTPS1, 2, which are highly conserved. Of these, PhTPS1, 4 are involved in the biosynthesis of floridoside and isofloridoside, with isofloridoside being the main product. PhTPS3 is an isofloridoside phosphate synthase, while PhTPS2 exhibits no activity. When challenged by desiccation, high temperature, and salt stress, PhTPS members were expressed to different degrees, but the responses to thermal stress and desiccation were stronger.
    CONCLUSIONS: Thus, in P. haitanensis, PhTPSs encode the enzymatical activity of floridoside and isofloridoside phosphate synthase and are crucial for the abiotic stress defense response.
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  • 文章类型: Journal Article
    Intertidal macroalgae are highly resistant to hypersaline stress conditions. However, the underlying mechanism remains unknown. In the present study, the mechanism behind Pyropia haitanensis responses to two hypersaline stress conditions [100‰ (HSS_100) and 110‰ (HSS_110)] was investigated via analyses of physiological and transcriptomic changes. We observed that the differences between the responses of Py. haitanensis to HSS_100 and HSS_110 conditions involved the following three aspects: osmotic regulation, ionic homeostasis, and adjustment to secondary stresses. First, the water retention of Py. haitanensis was maintained through increased expansin production under HSS_100 conditions, while cell wall pectin needed to be protected from hydrolysis via the increased abundance of a pectin methylesterase inhibitor under HSS_110 conditions. Meanwhile, Py. haitanensis achieved stable and rapid osmotic adjustments because of the coordinated accumulation of inorganic ions (K+, Na+, and Cl-) and organic osmolytes (glycine betaine and trehalose) under HSS_100 conditions, but not under HSS_110 conditions. Second, Py. haitanensis maintained a higher K+/Na+ ratio under HSS_100 conditions than under HSS_110 conditions, mainly via the export of Na+ into the apoplast rather than compartmentalizing it into the vacuoles, and the enhanced uptake and retention of K+. However, K+/Na+ homeostasis was not completely disrupted during a short-term exposure to HSS_110 conditions. Finally, the Py. haitanensis antioxidant system scavenged more ROS and synthesized more heat shock proteins under HSS_100 conditions than under HSS_110 conditions, although thalli may have been able to maintain a certain redox balance during a short-term exposure to HSS_110 conditions. These differences may explain why Py. haitanensis can adapt to HSS_100 conditions rather than HSS_110 conditions, and also why the thalli exposed to HSS_110 conditions can recover after being transferred to normal seawater. Thus, the data presented herein may elucidate the mechanisms enabling Pyropia species to tolerate the sudden and periodic changes in salinity typical of intertidal systems.
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