Neotropics

新热带
  • 文章类型: Journal Article
    DickyyuellaKang&Sharkey,gen.11月。是Braconidae的微胃复合体的新颖补充。最初,由于假定的同构特征的存在,这种复杂的分类分配提出了挑战。然而,更仔细的检查显示与微胃腺复合体有联系,由形态特征支持,例如在第一个代谢类白质上的螺旋体位置和在第七个代谢类白质上没有螺旋体。基于以下两个形态特征,存在一个倒Y形槽上的第一解释体和果胶状掌爪,DickyyuellaKang&Sharkey,gen.11月。暂时放置在CardiochilinaeAshmead内,1900年,尽管围绕系统发育关系存在不确定性。本文提供了DickyuellaKang&Sharkey的诊断,gen.11月。,DickyyyuellaargentinensisKang&Sharkey的描述,sp.11月。,并讨论了新属在微胃复合体中的分类学位置。
    Dickyyuella Kang & Sharkey, gen. nov. is a novel addition to the microgastroid complex of Braconidae. Taxonomic assignment within this complex posed challenges initially due to the presence of putatively plesiomorphic characters. However, closer examination revealed affiliations with the microgastroid complex, supported by morphological features such as the location of spiracles on the first metasomal tergum and the absence of spiracles on the seventh metasomal tergum. Based on the following two morphological characters, the presence of an inverted Y-shaped groove on the first metasomal tergum and pectinate tarsal claws, Dickyyuella Kang & Sharkey, gen. nov. is tentatively placed within Cardiochilinae Ashmead, 1900 despite uncertainties surrounding phylogenetic relationships. This article provides the diagnosis of Dickyyuella Kang & Sharkey, gen. nov., the description of Dickyyuellaargentinensis Kang & Sharkey, sp. nov., and a discussion of the taxonomic placement of the new genus within the microgastroid complex.
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  • 文章类型: Journal Article
    马鞭草(马鞭草科,Gentianales)是木本植物的大型和泛热带属,作为许多有毒生物碱的来源,包括马钱子碱.不幸的是,Strychnos各个级别的众多名称的地位仍未解决,包括新热带中许多特定或非特定分类群的分类群。在这项研究中,我们解决Strychnosbredemeyeri(别名Lasiostomabredemeyeri),1827年描述的一种物种,基于在文献很少的奥地利Märter探险(1783-1788)期间在委内瑞拉收集的类型材料。Strychnosbredemeyeri是一种手无寸铁的藤本植物,具有孤立的卷须和腋生花序,发生在巴西的新热带雨林和稀树草原,圭亚那,特立尼达和多巴哥,委内瑞拉。我们在这里澄清了LasiostomaSchreb的命名状态。,一个非法和多余的属,目前在Strychnos下是同义词,及其前物种Lasiostomabredemeyeri[=Strychnosbredemeyeri]。此外,我们对花梗和丁香进行了分类,这两个类群目前都是S.bredemeyeri的同义词。
    Strychnos (Loganiaceae, Gentianales) is a large and pantropical genus of woody plants, ethnobotanically important as a source of many toxic alkaloids, including strychnine. Unfortunately, the status of numerous names at various ranks of Strychnos remains unresolved, including that of many specific or infraspecific taxa in the Neotropics. In this study, we address Strychnosbredemeyeri (basionym Lasiostomabredemeyeri), a species described in 1827 based on type material collected in Venezuela during the poorly documented Austrian Märter expedition (1783-1788). Strychnosbredemeyeri is an unarmed liana with solitary tendrils and axillary inflorescences that occurs in Neotropical rainforests and savannas in Brazil, Guyana, Trinidad and Tobago, and Venezuela. We clarify here the nomenclatural status of Lasiostoma Schreb., an illegitimate and superfluous genus currently in synonymy under Strychnos, and its former species Lasiostomabredemeyeri [= Strychnosbredemeyeri]. Also, we lectotypify S.pedunculata and S.trinitensis, both taxa currently synonyms of S.bredemeyeri.
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  • 文章类型: Journal Article
    肺炎科,或者智利达尔文黄蜂,是南美膜翅目多样性的重要组成部分,但是关于这种昆虫的分类学和分布知识仍然不足。利用最近更新的分类学知识,我们评估了属水平的生物地理关系和沿纬度梯度的生物多样性空间格局。结果显示,智利有264种,分为102属和22个亚科。生物地理关系基于六个元素(世界性(n=50;36%),地方性(n=29;21%),新热带(n=22;16%),北方-东方(n=19;14%),南温带(n=16;11%)和澳大利亚),仅由三个属组成:Anacis,Labena,和Meringops.物种和属沿纬度梯度显示双峰分布:约34°和38°S。从生态区域的角度来看,丰富度集中在瓦尔迪维安温带森林,但是当在0.5×0.5细胞尺度下评估时,温带森林和智利Matorral之间的接触区有几个杰出的细胞。另一方面,阿塔卡马沙漠几乎没有达尔文黄蜂。结果与查尔斯·波特一致,他确定了一个由新热带和世界性属组成的北部省,在遥远的北部有自己的代表(11属),阿塔卡马沙漠核心的分配差距,在波特的新北极领域大约有128属,涵盖智利从25°S到合恩角的所有地区,包括胡安·费尔南德斯群岛。这些结果加强了知识差距,并需要对现有馆藏进行更多的抽样和研究。由于此阶段的采样间隙,确定高纬度地区的丰富度持续增加或减少是不可能的。还需要更多的分类学和分布信息来评估对特有属和物种的潜在威胁。
    Ichneumonidae, or Chilean Darwin wasps, are an important component of South American hymenopteran diversity, but the taxonomic and distributional knowledge on this insect is still deficient. Taking advantage of recently updated taxonomic knowledge, we assessed biogeographic relationships at the genus level and biodiversity spatial patterns along the latitudinal gradient. The results show the presence of 264 species in Chile, arranged in 102 genera and 22 subfamilies. Biogeographic relationships are based on six elements (cosmopolitan (n = 50; 36%), endemic (n = 29; 21%), Neotropical (n = 22; 16%), Holarctic-Oriental (n = 19; 14%), south-temperate (n = 16; 11%) and Australasian) and composed of just three genera: Anacis, Labena, and Meringops. Species and genera show a bimodal distribution along the latitudinal gradient: around 34° and 38° S. From an ecoregional perspective, richness is concentrated in the Valdivian temperate forests, but when assessed at a 0.5 × 0.5 cell scale, several outstanding cells are in the contact zone between the temperate forests and the Chilean Matorral. On the other hand, the Atacama Desert shows little or no presence of Darwin wasps. The results agree with Charles Porter, who identified a northern province composed of Neotropical and cosmopolitan genera with their own representatives in the far north (11 genera), a distributional gap in the core of the Atacama Desert, and around 128 genera in Porter\'s Neantarctic realm, covering all of Chile from 25° S to Cape Horn, including the Juan Fernandez islands. These results reinforce knowledge gaps and the need for more sampling and studies of available collections. Due to sampling gaps at this stage, identifying a continued increase or decrease in richness towards higher latitudes is not possible. More taxonomic and distributional information is also needed to assess potential threats to endemic genera and species.
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  • 文章类型: Journal Article
    在修改哥伦比亚的Rinorea属(紫罗兰科)的过程中,野外观察和植物标本室研究揭示了七个新物种。此处描述的几个新物种属于需要检查来自新热带地区的植物标本室材料的物种复合物。这里描述的每个新物种都有相反排列的叶子,属于Rinoreect。Pubiflorae,限制在新热带地区的部分。两个新物种与卵形单胞菌物种群隔离:来自哥伦比亚亚马逊Chiribiquete国家公园的Rinoreachiriibiquetensis和来自哥伦比亚和委内瑞拉边界附近的奥里诺科河的Rinoreastevensii。从Rinoreahirsuta物种复合体中分离出两个新物种:Rinoreagaleanoae-bernalii和Rinoreacogolloi,两者都来自哥伦比亚马格达莱纳河谷中部的安第斯中央山脉的东坡。从广泛分布的R.pubiflora物种复合体中,我们隔离了一个新物种,Rinoreacallejasii,来自巴拿马东南部和哥伦比亚的乔科河。除了这五个新的分类群与广泛分布的物种复合物分开,我们发现了两个以前未知的物种,它们与其他新热带Rinorea具有亲和力。Rinoreaaymardii来自委内瑞拉的AltoOrinoco-Casiquare生物圈保护区,最类似于哥伦比亚的R.melanodonta。Rinoreabetancurii与R.macrocarpa隔离,发生在哥伦比亚的亚马逊地区,巴西,秘鲁和委内瑞拉。在这项研究中,我们提供描述,新物种的插图和分布图,并使用IUCN红色名录类别和标准对灭绝风险进行初步评估。我们还提供了Rinoreect物种的识别钥匙。哥伦比亚的Pubiflorae。
    Over the course of revising the genus Rinorea (Violaceae) from Colombia, field observations and herbarium studies revealed seven new species. Several of the new species described here belong to species complexes that required examination of herbarium material from across the Neotropics. Each of the new species described here have oppositely arranged leaves and belong to Rinoreasect.Pubiflorae, a section restricted to the Neotropics. Two new species are segregated from the R.ovalifolia species complex: Rinoreachiribiquetensis from Chiribiquete National Park in the Colombian Amazon and Rinoreastevensii from the Orinoco River near the border of Colombia and Venezuela. Two new species are segregated from the Rinoreahirsuta species complex: Rinoreagaleanoae-bernalii and Rinoreacogolloi, both from the eastern slopes of the Andean Central Cordillera along the mid-Magdalena River Valley in Colombia. From the widely distributed R.pubiflora species complex, we segregated one new species, Rinoreacallejasii, from southeast Panama and the Chocó in Colombia. In addition to these five new taxa segregated from widely distributed species complexes, we discovered two previously unknown species with affinities to other Neotropical Rinorea. Rinoreaaymardii is described from the Alto Orinoco-Casiquiare Biosphere Reserve in Venezuela and most closely resembles R.melanodonta from Colombia. Rinoreabetancurii is segregated from R.macrocarpa and occurs in the Amazonian Regions of Colombia, Brazil, Peru and Venezuela. In this study, we provide descriptions, illustrations and distribution maps of the new species and make preliminary assessments of the risk of extinction using the IUCN Red List Categories and Criteria. We also furnish an identification key to the species of Rinoreasect.Pubiflorae in Colombia.
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  • 文章类型: Journal Article
    背景:虎杖科是一个以杂草闻名的家族,和可食用的植物,苦参(荞麦)和大黄(大黄),主要是草本和温带分布。然而,该家族还包含许多主要分布在热带和亚热带的血统。值得注意的是,这些血统是木质的,不像他们温和的亲戚。迄今为止,全基因组测序集中在温带和草本类群。为了增加对the科遗传知识的广度,我们在这里展示了六个完全组装和注释的叶绿体基因组,来自六个热带,木本属:Coccolobarugosa(一种狭窄且濒临灭绝的波多黎各特有物种),绞股蓝,emarginataNeomillspaughia,墨西哥Podopterus,Ruprechtiacoriacea,还有三叶草.
    结果:这些组件代表了Podopterus属的第一个公开可用的组装和注释的质体,体操,和Neomillspaughia,和第一个组装和注释的硬体,Ruprechtiacoriacea,还有三叶草.我们发现组装的叶绿体基因组高于虎杖科质体的中位数大小,但在其他方面表现出典型的家庭特征。在ndh基因和质体的小单拷贝(SSC)区域中发现了最大的序列变异特征。反向重复序列显示出高GC含量和跨属的小序列变异。当放置在系统发育环境中时,我们的序列在Eriogonoideae中得到了解析。
    结论:这六个来自热带木本虎杖科的质体在该科中具有典型性。此处介绍的Ruprechtiacoriacea的质体组装质疑先前发表的R.albida的质体组装的序列同一性。
    BACKGROUND: The Polygonaceae is a family well-known for its weeds, and edible plants, Fagopyrum (buckwheat) and Rheum (rhubarb), which are primarily herbaceous and temperate in distribution. Yet, the family also contains a number of lineages that are principally distributed in the tropics and subtropics. Notably, these lineages are woody, unlike their temperate relatives. To date, full-genome sequencing has focused on the temperate and herbaceous taxa. In an effort to increase breadth of genetic knowledge of the Polygonaceae, we here present six fully assembled and annotated chloroplast genomes from six of the tropical, woody genera: Coccoloba rugosa (a narrow and endangered Puerto Rican endemic), Gymnopodium floribundum, Neomillspaughia emarginata, Podopterus mexicanus, Ruprechtia coriacea, and Triplaris cumingiana.
    RESULTS: These assemblies represent the first publicly-available assembled and annotated plastomes for the genera Podopterus, Gymnopodium, and Neomillspaughia, and the first assembled and annotated plastomes for the species Coccoloba rugosa, Ruprechtia coriacea, and Triplaris cumingiana. We found the assembled chloroplast genomes to be above the median size of Polygonaceae plastomes, but otherwise exhibit features typical of the family. The features of greatest sequence variation are found among the ndh genes and in the small single copy (SSC) region of the plastome. The inverted repeats show high GC content and little sequence variation across genera. When placed in a phylogenetic context, our sequences were resolved within the Eriogonoideae.
    CONCLUSIONS: These six plastomes from among the tropical woody Polygonaceae appear typical within the family. The plastome assembly of Ruprechtia coriacea presented here calls into question the sequence identity of a previously published plastome assembly of R. albida.
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  • 文章类型: Journal Article
    加上新热带地区旱季的加剧,越来越多的森林砍伐预计会加剧物种灭绝,这可能会导致多种营养群落和生态系统功能的巨大变化。最近的研究表明,在降水减少的地方,栖息地丧失的影响更大。然而,关于干旱和森林砍伐在生态系统水平上的纯粹和相互作用影响的实验研究仍然很少。
    这里,我们使用雨棚和从雨林移植到自然微观世界的开放区域(在水箱凤梨的充满雨水的叶子中发现的水生生态系统和微生物动物食物网),以模拟全因子实验设计中的干旱和森林砍伐。我们分析了我们的治疗方法对功能群落结构(包括微生物,有害和掠夺性无脊椎动物),以及槽凤梨科生态系统中凋落物的分解。
    仅干旱或森林砍伐就对各种营养水平的生物量产生了中等影响,但没有消灭物种。然而,它们的相互作用协同降低了所有无脊椎动物官能团和细菌的生物量。捕食者是受影响最大的营养类群,因为它们被完全消灭了,而有害生物生物量减少了约95%。真菌生物量不受我们的处理的影响或增强。分解基本上是由微生物活动驱动的,并且在涉及森林砍伐和/或干旱的处理中没有变化。
    我们的结果表明,高度抗性的微生物,如真菌(加上一些有害微生物)在面对干旱和栖息地变化时保持着关键的生态系统功能。我们得出结论,栖息地的破坏加剧了气候变化的问题,这两种现象对食物网的影响是相辅相成的,生态系统功能的稳定性取决于核心生物群体的抵抗力。假设采取全球行动比采取地方-区域行动更具挑战性,应鼓励决策者实施环境行动计划,以制止栖息地的破坏,以抑制与全球气候变化影响的任何有害互动效应。
    UNASSIGNED: Together with the intensification of dry seasons in Neotropical regions, increasing deforestation is expected to exacerbate species extinctions, something that could lead to dramatic shifts in multitrophic communities and ecosystem functions. Recent studies suggest that the effects of habitat loss are greater where precipitation has decreased. Yet, experimental studies of the pure and interactive effects of drought and deforestation at ecosystem level remain scarce.
    UNASSIGNED: Here, we used rainshelters and transplantation from rainforest to open areas of natural microcosms (the aquatic ecosystem and microbial-faunal food web found within the rainwater-filled leaves of tank bromeliads) to emulate drought and deforestation in a full factorial experimental design. We analysed the pure and interactive effects of our treatments on functional community structure (including microorganisms, detritivore and predatory invertebrates), and on leaf litter decomposition in tank bromeliad ecosystems.
    UNASSIGNED: Drought or deforestation alone had a moderate impact on biomass at the various trophic level, but did not eliminate species. However, their interaction synergistically reduced the biomass of all invertebrate functional groups and bacteria. Predators were the most impacted trophic group as they were totally eliminated, while detritivore biomass was reduced by about 95%. Fungal biomass was either unaffected or boosted by our treatments. Decomposition was essentially driven by microbial activity, and did not change across treatments involving deforestation and/or drought.
    UNASSIGNED: Our results suggest that highly resistant microorganisms such as fungi (plus a few detritivores) maintain key ecosystem functions in the face of drought and habitat change. We conclude that habitat destruction compounds the problems of climate change, that the impacts of the two phenomena on food webs are mutually reinforcing, and that the stability of ecosystem functions depends on the resistance of a core group of organisms. Assuming that taking global action is more challenging than taking local-regional actions, policy-makers should be encouraged to implement environmental action plans that will halt habitat destruction, to dampen any detrimental interactive effect with the impacts of global climate change.
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  • 文章类型: Journal Article
    一般来说,具有广泛生态位的物种也显示出较大范围的大小。我们调查了亚马逊树种的水文生态位宽度与地理范围之间的关系,试图了解栖息地专业化对亚马逊湿地和旱地森林在当前树种分布中的作用。我们从GBIF和SpeciesLink获得了571,092个有效发生点,以估计所有已知亚马逊树种(5150树种)的76%的范围大小和生态位宽度。水文生态位宽度是在由(1)年总降水量定义的不同一维轴上测量的;(2)降水季节性;(3)实际蒸散量;(4)地下水位深度。使用alpha船体调整来估计地理范围大小。一般线性模型用于将生态位宽度与范围大小相关联,同时对比湿地中出现和未出现的树种。亚马逊树种的水文生态位宽度主要沿地下水位深度轴变化。亚马逊树种的平均范围为751,000km2(中位数为154,000km2,标准偏差为1,550,000km2)。亚马逊树种的生态位宽度-范围大小关系对所有模型都是正的,当包括一个物种发生在湿地还是陆地高地时,模型的解释力得到了提高。湿地物种的生态位宽度-范围大小关系具有更陡的正斜率,对于给定的生态位宽度,范围始终更大。亚马逊树种的水文生态位宽度和范围大小差异很大,但是大多数物种的生态位宽度和范围都很窄。我们的结果表明,南美河景可能一直是新热带低地物种扩散的走廊。
    Generally, species with broad niches also show large range sizes. We investigated the relationship between hydrological niche breadth and geographic range size for Amazonian tree species seeking to understand the role of habitat specialization to Amazonian wetlands and upland forests on the current distribution of tree species. We obtained 571,092 valid occurrence points from GBIF and SpeciesLink to estimate the range size and the niche breadth of 76% of all known Amazonian tree species (5150 tree species). Hydrological niche breadth was measured on different unidimensional axes defined by (1) total annual precipitation; (2) precipitation seasonality; (3) actual evapotranspiration; and (4) water table depth. Geographic range sizes were estimated using alpha-hull adjustments. General linear models were used to relate niche breadth to range size while contrasting tree species occurring and not occurring in wetlands. The hydrological niche breadth of Amazonian tree species varied mostly along the water table depth axis. The average range size for an Amazonian tree species was 751,000 km2 (median of 154,000 km2 and standard deviation of 1,550,000 km2). Niche breadth-range size relationships for Amazonian tree species were positive for all models, and the explanatory power of the models improved when including whether a species occurred in wetlands or in terrestrial uplands. Wetland species had steeper positive slopes for the niche breadth-range size relationship, and consistently larger range sizes for a given niche breadth. Amazonian tree species varied strongly in hydrological niche breadth and range size, but most species had narrow niche breadths and range sizes. Our results suggest that the South American riverscape may have been acting as a corridor for species dispersal in the Neotropical lowlands.
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  • 文章类型: Journal Article
    新热带地区的物种丰富度与环境异质性和复杂的地质历史有关。我们评估了哪些生物地理过程与猴树青蛙的多样化有关,来自新热带的特有进化枝。我们测试了两个相互竞争的假设:Phillomedusinae的多样化发生在新热带的“南北”或“南北”方向。我们还假设海洋渗入和安第斯隆起在促进其多样化方面起着至关重要的作用。我们在贝叶斯分析中使用了13个分子标记来推断57个Phyllomedusinae物种之间的系统发育关系,并估计它们的发散时间。考虑到新热带地区的景观变化,我们根据12个生物地理单位估算了祖先的范围。我们发现Phyllomedusinia的假设祖先范围可能在整个南美很普遍,从西亚马逊到南大西洋森林,在29.5Mya。Phyllomedusines\'祖先必须最初通过代位分化,通常其次是跳跃分散和同胞物种形成。地区之间的扩散主要发生在西亚马逊地区向北安第斯山脉和南美干旱景观的对角线上,与“南-北”和“北-南”多样化假设的不同模式。我们的结果揭示了猴树青蛙的复杂多样化过程,在过去的3000万年中,与安第斯山脉北部的造山运动和南美海洋渗入同时发生。
    The species richness in the Neotropics has been linked to environmental heterogeneity and a complex geological history. We evaluated which biogeographic processes were associated with the diversification of Monkey tree frogs, an endemic clade from the Neotropics. We tested two competing hypotheses: the diversification of Phyllomedusinae occurred either in a \"south-north\" or a \"north-south\" direction in the Neotropics. We also hypothesized that marine introgressions and Andean uplift had a crucial role in promoting their diversification. We used 13 molecular markers in a Bayesian analysis to infer phylogenetic relationships among 57 species of Phyllomedusinae and to estimate their divergence times. We estimated ancestral ranges based on 12 biogeographic units considering the landscape modifications of the Neotropical region. We found that the Phyllomedusinae hypothetical ancestor range was probably widespread throughout South America, from Western Amazon to Southern Atlantic Forest, at 29.5 Mya. The Phyllomedusines\' ancestor must have initially diverged through vicariance, generally followed by jump-dispersals and sympatric speciation. Dispersal among areas occurred mostly from Western Amazonia towards Northern Andes and the South American diagonal of dry landscapes, a divergent pattern from both \"south-north\" and \"north-south\" diversification hypotheses. Our results revealed a complex diversification process of Monkey tree frogs, occurring simultaneously with the orogeny of Northern Andes and the South American marine introgressions in the last 30 million years.
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  • 文章类型: Journal Article
    半水生昆虫(半翅目:异翅目:Gerromorpha)分布在世界各地,在陆地生态系统中起着重要作用。它们是占据空气-水界面的最成功的生物群体,是研究生态学和进化的重要模型,并且可以成为生物监测中的相关工具。Veliidae是半水生昆虫的第二大特殊家族,但是它的内部分类,包括亚科和属,是人造的,基于Symplesiomorphies。这些非单系实体之一是ParaveliaBreddin,1898年,是Veliinae亚科中最大的属。
    为了更好地对Veliinae进行分类,我们描述了Foveavelia拥有以前放置在Paravelia的五种南美物种。新属的特征是以下特征的组合:整个胸部和腹部异常的粗糙表皮穿刺;一对小,结霜,由前胸前叶上的一层非常致密的短刚毛形成的短柔毛区域;胫骨前抓梳仅出现在男性中;胫骨中部有一排细长的深棕色毛滴虫样刚毛,远端尺寸减小;前爪顶端黄斑拉长,中长收缩,到达翼尖;雄性proctiger有一对前臭突起。除了描述,提供了Foveavelia物种的钥匙,附有插图和物种分布图。
    UNASSIGNED: Semiaquatic bugs (Hemiptera: Heteroptera: Gerromorpha) are distributed worldwide and play fundamental roles in limnic ecosystems. They are the most successful group of organisms to occupy the air-water interface, are important models to study ecology and evolution, and can be relevant tools in biomonitoring. Veliidae is the second most speciose family of semiaquatic bugs, but its internal classification, including subfamilies and genera, is artificial and based on symplesiomorphies. One of these non-monophyletic entities is Paravelia Breddin, 1898, the largest genus in the subfamily Veliinae.
    UNASSIGNED: In an effort to better classify the Veliinae, we describe Foveavelia to hold five South American species previously placed in Paravelia. The new genus is characterized by the following combination of features: unusual coarse cuticular punctures throughout the thorax and abdomen; a pair of small, frosty, pubescent areas formed by a very dense layer of short setae on the anterior lobe of the pronotum; fore tibial grasping comb present only in males; middle tibia with a row of elongate dark-brown trichobothria-like setae on the distal third, decreasing in size distally; macropterous specimens with the apical macula of the forewings elongate and constricted at mid-length, reaching the wing apex; and the male proctiger with a pair of anterodorsal projections. Besides the description, a key to the species of Foveavelia is provided, accompanied by illustrations and a species distribution map.
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  • 文章类型: Journal Article
    FanniaPusio,鸡粪蝇物种,尽管它是法医,但仍未被探索,卫生,和兽医在近北区和新热带地区的重要性。在这项研究中,我们首次使用下一代测序技术获得了Fanniapusio完整的线粒体基因组.我们将其与以前发表的古北地区的该属的有丝分裂基因组进行了比较,并基于Calyptratae果蝇的串联蛋白质编码基因(PCGs)数据集研究了其系统发育位置。F.pusio的环状线粒体基因组长度为16,176bp,A+T含量高(78.3%),他的基因合而为一,密码子使用分析,和氨基酸频率与先前报道的Fannia有丝分裂基因组相似。除nad2基因外,所有PCGs均经过纯化选择。FanniaPCG的种间K2P距离平均为12.4%(8.1%-21.1%)。根据分子数据,Fannia属是单系的,与Muscidae密切相关。需要进一步的分类学采样才能深入研究该属中最初提出的物种组和亚组的系统发育关系。这些结果为研究线粒体基因组进化提供了有价值的数据集,并为Fannia的分类学和系统学提供了资源。
    Fannia pusio, the chicken dung fly species, remains unexplored despite its forensic, sanitary, and veterinary importance in the Nearctic and Neotropical regions. In this study, we obtained the complete mitochondrial genome of Fannia pusio for the first time using next-generation sequencing. We compared it with previously published mitogenomes of the genus from the Palearctic region, and its phylogenetic position was studied based on the concatenated protein-coding genes (PCGs) dataset of Calyptratae flies. The circular mitochondrial genome of F. pusio is 16,176 bp in length, with a high A + T content (78.3%), whose gene synteny, codon usage analysis, and amino acid frequency are similar to previously reported Fannia mitogenomes. All PCGs underwent purifying selection except the nad2 gene. Interspecific K2P distances of PCGs of Fannia yielded an average of 12.4% (8.1%-21.1%). The Fannia genus is monophyletic and closely related to Muscidae based on molecular data. Further taxonomic sampling is required to deep into the phylogenetic relationships of the originally proposed species-groups and subgroups within the genus. These results provide a valuable dataset for studying the mitochondrial genome evolution and a resource for the taxonomy and systematics of Fannia.
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