Liquid chromatography mass spectrometry

液相色谱质谱
  • 文章类型: Journal Article
    这项研究的目的是评估从三个西西里橄榄品种获得的特级初榨橄榄油(EVOO)样品的营养品质:Nocellara,Biancolilla,还有Cerasuola.我们还证明了生物酚之间的关系,基本参数和面板测试分数,并评估了生物酚在EVOO中的稳定性。评估还考虑了橄榄收获期的变化以及四种不同碾磨方法的影响。对收集到的数据进行统计分析表明,品种和收获期是影响生物酚含量的主要因素,而采用的研磨方法并没有显着影响油中生物酚的水平。面板测试结果也具有启发性,因为它们与品种和多酚含量密切相关。根据EC法规432/2012中概述的标准,我们选择了三个样本,每个代表一个品种,在16个月的时间跨度内表现出最高的生物酚含量来评估生物酚的稳定性。
    The aim of this study was to assess the nutraceutical qualities of extra virgin olive oil (EVOO) samples obtained from three Sicilian olive cultivars: Nocellara, Biancolilla, and Cerasuola. We also evidenced the relationship among biophenols, base parameters and panel test scores, and evaluated the stability of the biophenols in EVOO. The assessment also took into consideration variations in olive harvesting periods and the influence of four different milling methods. A statistical analysis of the collected data revealed that the cultivar and harvesting period were the primary factors influencing the bio-phenol content, while the milling methods employed did not significantly affect the levels of biophenols in the oils. The panel test results were also illuminating as they were strongly related to the cultivar and polyphenol content. Following the criteria outlined in EC Regulation 432/2012, we selected three samples, each representing one of the cultivars, which exhibited the highest bio-phenol content to evaluate the biophenol stability during a time span of 16 months.
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  • 文章类型: Journal Article
    研究表明,短链脂肪酸(SCFA),主要由纤维发酵产生,通过游离脂肪酸受体2和3(FFA2和FFA3)调节胰岛素分泌。由于这些是G蛋白偶联受体(GPCRs),它们作为治疗2型糖尿病(T2D)的靶点具有潜在的治疗价值.这些受体调节胰岛素分泌和胰腺β细胞功能的其他方面的确切机制尚不清楚。已经报道,从胰腺β细胞的乙酸盐的葡萄糖依赖性释放负调节葡萄糖刺激的胰岛素分泌。虽然这些数据提高了乙酸盐对这些受体的潜在自分泌作用的可能性,这些发现尚未得到独立证实,这种观察存在多种担忧,特别是使用的乙酸盐检测方法缺乏特异性和精确性。
    使用Min6细胞和小鼠胰岛,我们评估了乙酸盐和丙酮酸盐的产生和分泌对不同葡萄糖浓度的反应,通过液相色谱质谱。
    使用Min6细胞和小鼠胰岛,我们表明,细胞内丙酮酸和乙酸盐都在高葡萄糖条件下增加;然而,Min6细胞中的细胞内乙酸盐水平仅略有增加,仅在胰岛中增加。Further,细胞外乙酸盐水平不受Min6细胞或胰岛孵育培养基中葡萄糖浓度的影响。
    我们的发现没有证实胰腺β细胞葡萄糖依赖性释放乙酸,因此,使自分泌抑制作用对葡萄糖刺激的胰岛素分泌的可能性无效。
    UNASSIGNED: Studies suggest that short chain fatty acids (SCFAs), which are primarily produced from fermentation of fiber, regulate insulin secretion through free fatty acid receptors 2 and 3 (FFA2 and FFA3). As these are G-protein coupled receptors (GPCRs), they have potential therapeutic value as targets for treating type 2 diabetes (T2D). The exact mechanism by which these receptors regulate insulin secretion and other aspects of pancreatic β cell function is unclear. It has been reported that glucose-dependent release of acetate from pancreatic β cells negatively regulates glucose stimulated insulin secretion. While these data raise the possibility of acetate\'s potential autocrine action on these receptors, these findings have not been independently confirmed, and multiple concerns exist with this observation, particularly the lack of specificity and precision of the acetate detection methodology used.
    UNASSIGNED: Using Min6 cells and mouse islets, we assessed acetate and pyruvate production and secretion in response to different glucose concentrations, via liquid chromatography mass spectrometry.
    UNASSIGNED: Using Min6 cells and mouse islets, we showed that both intracellular pyruvate and acetate increased with high glucose conditions; however, intracellular acetate level increased only slightly and exclusively in Min6 cells but not in the islets. Further, extracellular acetate levels were not affected by the concentration of glucose in the incubation medium of either Min6 cells or islets.
    UNASSIGNED: Our findings do not substantiate the glucose-dependent release of acetate from pancreatic β cells, and therefore, invalidate the possibility of an autocrine inhibitory effect on glucose stimulated insulin secretion.
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  • 文章类型: Journal Article
    简介:兴奋剂和类固醇的使用对动物健康构成严重威胁,甚至可能导致其过早和痛苦的死亡。然而,兴奋剂是一个严重的问题,在今天的动物比赛世界,尤其是在骆驼比赛中。睾酮及其十酯(苯甲酸酯,戊酸盐,异己酸盐,六氢苯甲酸酯,癸酸,十一烷酸酯,月桂酸盐,庚酸盐,cypionate,和己酸盐)是最重要的,因为当它们被施用于动物时,很难有效地测量它们。通常使用尿液和血液测试来确定骆驼和其他动物中的睾丸激素及其酯的水平。本研究的目的是开发和验证液相色谱-质谱(LC-MS/MS)方法,以确定驼毛中的睾酮酯,并应用经验证的方法测定采集样品中的睾酮酯。据我们所知,这是此类研究的第一份报告。结果和讨论:睾酮及其十种衍生物的水平,连同皮质醇-D4内标,为LC-MS/MS分析进行了优化;然而,只有睾酮及其七种酯(即苯甲酸酯,戊酸盐,异己酸盐,六氢苯甲酸酯,癸酸,十一烷酸酯和月桂酸酯)可以在驼毛中得到验证。在骆驼头发样品中只能测定五种睾酮酯;戊酸酯的浓度为10.5-14.9pg/mg(在三头骆驼中),对于六氢苯甲酸酯(六头骆驼),12.5-151.6pg/mg,月桂酸盐(五头骆驼)4.8-32.1pg/mg,5.1pg/mg癸酸酯(在一只骆驼中),和8.35-169pg/mg的睾酮(在所有24头骆驼中)。有趣的是,三只赛马骆驼显示出高浓度的睾丸激素(59.2-169pg/mg,所有三只骆驼),月桂酸盐(4.8-14.5pg/mg,两只骆驼),六氢苯甲酸酯(116pg/mg,一只骆驼),癸酸酯(5.1pg/mg,一只骆驼),和戊酸(11.7pg/mg,一只骆驼)。方法:从AlAin的21头非赛车单峰骆驼和3头赛车骆驼中收集骆驼毛发样本,阿联酋;这些被净化了,粉碎,声处理,并在分析之前提取。采用LC-MS/MS方法测定毛发样品中睾酮酯的水平。结论:这种新颖的驼毛测试程序是准确的,敏感,快速,和强大的。这项研究报告的发现对于评估赛车骆驼的可疑兴奋剂罪行可能具有重要意义。需要进一步的受控睾酮补充研究,以评估个体酯对骆驼健康和疾病以及性能增强水平的影响。这项新的头发测试可以促进兴奋剂控制方面的进一步研究,毒理学,和药理学,以及其他与骆驼健康相关的临床应用,损伤,和疾病。
    Introduction: Doping and steroid use represent a serious threat to animal health and can even lead to their untimely and painful death. However, doping is an acute problem in today\'s animal racing world, particularly in camel racing. Testosterone and its ten esters (benzoate, valerate, isocaproate, hexahydrobenzoate, decanoate, undecanoate, laurate, enanthate, cypionate, and caproate) are of utmost importance, because when they are administered to animals it is difficult to measure them efficiently. The levels of testosterone and its esters in camels and other animals are typically determined using urine and blood tests. The aim of this study was to develop and validate a liquid chromatographic-mass spectrometric (LC-MS/MS) method to determine testosterone esters in camel hair, and to apply the validated method to determine testosterone esters in collected samples. To our knowledge, this is the first report of such research. Results and Discussion: The levels of testosterone and its ten derivatives, along with the cortisol-D4 internal standard, were optimised for LC-MS/MS analysis; however, only testosterone along with its seven esters (namely benzoate, valerate, isocaproate, hexahydrobenzoate, decanoate, undecanoate and laurate) could be validated in camel hair. Only five testosterone esters could be determined in camel hair samples; the concentrations were obtained as 10.5-14.9 pg/mg for valerate (in three camels), 12.5-151.6 pg/mg for hexahydrobenzoate (in six camels), 4.8-32.1 pg/mg for laurate (in five camels), 5.1 pg/mg decanoate (in one camel), and 8.35-169 pg/mg for testosterone (in all 24 camels). Interestingly, the three racing camels displayed high concentrations of testosterone (59.2-169 pg/mg, all three camels), laurate (4.8-14.5 pg/mg, two camels), hexahydrobenzoate (116 pg/mg, one camel), decanoate (5.1 pg/mg, one camel), and valerate (11.7 pg/mg, one camel). Methods: Camel hair samples were collected from 21 non-racing dromedary camels along with three racing camels in Al Ain, UAE; these were decontaminated, pulverised, sonicated, and extracted prior to analysis. An LC-MS/MS method was employed to determine the levels of testosterone esters in the hair samples. Conclusions: This novel camel-hair test procedure is accurate, sensitive, rapid, and robust. The findings reported in this study could be significant to evaluate racing camels for suspected doping offenses. Further controlled testosterone supplementation studies are required to evaluate individual esters\' effects on camel health and diseases and on performance enhancement levels. This new hair test could promote further studies in doping control, toxicology, and pharmacology, as well as having other clinical applications relating to camel health, injury, and disease.
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  • 文章类型: Journal Article
    这项研究旨在确定是否从七个芥子亚种中提取了叶提取物。紫花苜蓿品种及其生化活性化合物(芥子油苷和下游衍生产品)抑制三种众所周知的致病性卵菌的菌丝体生长,水吸虫,植物疫霉和黄疫霉;在猕猴桃藤蔓衰退综合症(KVDS)的发展中最重要。将10、20和30mg的叶提取物接种在培养皿中(90mmØ,每个22毫升液体培养基-马铃薯葡萄糖琼脂),用于体外生物测定。将病原体塞置于每个板的中心,并在接种后5天标记卵菌菌落的周长。接种后5、10和15天,每板4个标记测量放射状菌落生长,用ImageJ软件进行图像分析。15天后,所有菌株的生长速率被抑制约67%。这在应用最高浓度的叶提取物时最为明显。采用液相色谱质谱(LC-MS)和气相色谱质谱(GC-MS),15种芥子油苷化合物,其中葡萄糖蛋白酶含量最高,已确定。还研究了叶子产生的水解产物(芥酸素和sativin)的浓度,并且与菌落径向生长显着相关,尤其是对PP。chamaehypon和Pp。vexans.芥子油苷的三种下游产物(两种纯异硫氰酸酯,AITC和PEITC;和一个吲哚I3C;所有常见于十字花科)也进行了测试,并且在最高浓度(0.6µL)下观察到统计学上显着的生长抑制。
    This study aimed to determine whether leaf extracts from seven Eruca vesicaria subsp. sativa cultivars and their biochemically active compounds (glucosinolates and downstream-derived products) inhibit mycelia growth of three well-known pathogenic oomycetes, Phytopythium chamaehyphon, Phytopythium vexans and Phytophthora citrophthora; being the most significant in the development of Kiwifruit Vine Decline Syndrome (KVDS). Leaf extract quantity of 10, 20 and 30 mg were inoculated in Petri dish (90 mm Ø, each 22 mL of liquid medium - Potato Dextrose Agar), for in vitro bioassays. A pathogen plug was placed in the centre of each plate and the Oomycota colony perimeter was marked 5 days after inoculation. Radial colony growth was measured from 4 marks per plate 5, 10, and 15 days after inoculation, further elaborated with Image J software image analysis. Growth rates for all strains were inhibited by around 67% after 15 days. This was most pronounced when applying the highest concentration of leaf extract. By using Liquid Chromatography Mass Spectrometry (LC-MS) and Gas Chromatography Mass Spectrometry (GC-MS), fifteen glucosinolate compounds, of which glucosativin was found in the highest quantity, were identified. Concentrations of hydrolysis products produced by leaves (erucin and sativin) were also investigated, and were significantly associated with colony radial growth, especially towards Pp. chamaehyphon and Pp. vexans. Three downstream products of glucosinolates (two pure isothiocyanates, AITC and PEITC; and one indole I3C; all commonly present in Brassicaceae) were also tested, and a statistically significant inhibition of growth was observed at the highest concentration (0.6 µL).
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  • 文章类型: Journal Article
    背景:在平衡的全身麻醉方案中加入右美托咪定(DEX)可有效改善马的临床效果和麻醉恢复质量。这项研究旨在确定每60分钟以2µg/kg的剂量重复皮下(SC)给药后DEX的药代动力学特征,直到程序结束,与以1µg/kg/h的静脉内恒定速率输注(CRI)相比。在接受诊断程序直至诊断程序结束的麻醉马中。
    结果:在CRI和SC组中,DEX最大浓度(Cmax)分别为0.83±0.27ng/mL和1.14±0.71ng/mL,分别,在时间(Tmax)为57.0±13.4min和105.5±29.9min时达到。对于CRI组和SC组,到最后可测量浓度(MRTlast)的平均停留时间分别为11.7±6.2和55.8±19.7分钟。分别。CRI组表观消除半衰期为18.0±10.0min,SC组为94.8±69.8min,而CRI和SC组的曲线下面积(AUC0-last)分别为67.7±29.3和83.2±60.5min*ng/mL,分别。CRI组清除率为16.26±8.07mL/min/kg。两组均无不良反应迹象。
    结论:在麻醉马中重复SC给药后,DEX的药代动力学特征与麻醉期间的静脉CRI给药相当,并且在全身麻醉的恢复期有益。SC途径可以被认为是CRI的替代方案,以改善接受全身麻醉的马患者的恢复质量。
    BACKGROUND: The inclusion of dexmedetomidine (DEX) within a balanced general anaesthesia protocol is effective in improving the clinical outcome and recovery quality of anaesthesia in horses. This study aimed to determine the pharmacokinetic profile of DEX following repeated subcutaneous (SC) administration at 2 µg/kg every 60 min till the end of the procedure in comparison to intravenous constant rate infusion (CRI) at 1 µg/kg/h in anaesthetized horses undergoing diagnostic procedures up to the end of the diagnostic procedure.
    RESULTS: In the CRI and SC groups DEX maximum concentrations (Cmax) were 0.83 ± 0.27 ng/mL and 1.14 ± 0.71 ng/mL, respectively, reached at a time (Tmax) of 57.0 ± 13.4 min and 105.5 ± 29.9 min. Mean residence time to the last measurable concentration (MRTlast) was 11.7 ± 6.2 and 55.8 ± 19.7 min for the CRI group and SC groups, respectively. The apparent elimination half-life was 18.0 ± 10.0 min in the CRI group and 94.8 ± 69.8 min for the SC group, whereas the area under the curve (AUC0-last) resulted 67.7 ± 29.3 and 83.2 ± 60.5 min*ng/mL for CRI and SC group, respectively. Clearance was 16.26 ± 8.07 mL/min/kg for the CRI group. No signs of adverse effects were recorded in both groups.
    CONCLUSIONS: The pharmacokinetic profile of DEX following repeated SC administration in anaesthetized horses was comparable to intravenous CRI administration during the intranaesthetic period and beneficial during the recovery phase from general anaesthesia. The SC route could be considered as an alternative to CRI for improving the recovery quality of equine patients undergoing general anaesthesia.
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  • 文章类型: Journal Article
    食用低水平的鸡蛋已经可以引起人类对鸡蛋过敏的人的有害生理反应。通过检测食品中的鸡蛋,使用鸡蛋ELISA试剂盒来确定其意外存在,食品生产商可以做出反应,以避免其产品的潜在安全或质量风险。选择适合当前问题的ELISA试剂盒具有挑战性,在其他人中,缺乏有关特定矩阵的测定性能的信息。在这项研究中,比较了七种市售鸡蛋ELISA试剂盒对九种不同相关基质的性能:曲奇,巧克力,意大利面,敷料,股票立方体,葡萄酒,蔬菜饮料和牛奶,冰淇淋和肉类/肉类替代品。对于所有ELISA试剂盒,鸡蛋的存在均统一为mg总鸡蛋蛋白kg-1食品。在每个矩阵中,用于恢复的套件性能,比较分析内和分析间,而且加工也是通过测定鸡蛋中招致的样品来计算的。所有七个试剂盒都能够在0.2mg总卵蛋白的VITAL3ED01水平和每个基质的相应相关部分大小下定性检测卵。对于定量结果,每个ELISA试剂盒显示检测到的卵浓度随着卵水平的增加而增加,并且在设定的饼干回收标准内进行,巧克力,股票立方体和葡萄酒。对于意大利面,蔬菜饮料和牛奶,冰淇淋,沙拉酱,卵的回收率在至少4种ELISA试剂盒的设定标准内。最具挑战性的基质是肉类/肉类替代品,显示出高基体效应,这不能用同源空白中可能存在的卵来解释。只有一个ELISA试剂盒能够在肉/肉替代品基质的设定标准内回收鸡蛋。结果使食品工业能够选择适合在感兴趣的基质中检测卵的ELISA试剂盒。
    Consumption of low levels of egg already can evoke harmful physiological responses in humans in those allergic to eggs. By detection of egg in food products, using Egg ELISA kits to determine its unintended presence, food producers can respond to avoid potential safety or quality risks of their products. Selection of an ELISA kit fit for the issue at hand is challenging due to, amongst others, lack of information on assay performances with specified matrices. In this study, performances of seven commercial egg ELISA kits are compared for nine different relevant matrices: cookie, chocolate, pasta, dressing, stock cube, wine, vegetable drink and milk, ice cream and meat/meat replacers. The presence of egg was unified for all ELISA kits to mg total egg protein kg-1 food product. In every matrix, kit performances for recovery, intra- and interassay were compared, and also processing is accounted for by determination of egg in incurred samples. All seven kits were able to detect egg qualitatively at the VITAL3 ED01 level of 0.2 mg total egg protein and the corresponding relevant portion size for each matrix. For quantitative results, each ELISA kit showed an increase in detected egg concentration with increased egg levels and performed within the set criteria for recovery for the cookie, chocolate, stock cube and wine. For pasta, vegetable drink and milk, ice cream, and salad dressing, recovery of egg was within the set criteria for at least 4 ELISA kits. Most challenging matrices were meat/meat replacers, showing high matrix effects which could not be explained by the possible egg presence in the cognate blank. Only one ELISA kit was able to recover egg within the set criteria for the meat/meat replacer matrix. Results enable food industry to choose for ELISA kits suitable for egg detection in the matrix of interest.
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  • 文章类型: Preprint
    心脏不停地收缩,需要不断的能量供应,利用许多代谢底物,如脂肪酸,碳水化合物,脂质,和氨基酸来满足其高能量需求。因此,对各种代谢物的全面分析是了解心脏代谢的迫切需要;然而,由于代谢物极性范围广泛,使得提取和检测变得困难,因此完整的代谢组分析仍然具有挑战性.在这里,我们实施了平行代谢物提取和基于高分辨率质谱(MS)的方法,以获得对人类心脏代谢组的全面分析.为了捕获不同范围的代谢物极性,我们首先进行了六次平行的液-液萃取(三次单相,两个双相,和一次三相提取)健康的人类供体心脏组织。接下来,我们利用两个互补的MS平台进行代谢物检测-直接输注超高分辨率傅里叶变换离子回旋共振(DI-FTICR)和高分辨率液相色谱四极杆飞行时间串联MS(LC-Q-TOFMS/MS).使用DI-FTICRMS,检测到9,521个代谢特征,其中7,699个被分配了化学式,1,756个被分配了精确的质量分配注释。使用LC-Q-TOFMS/MS,检测到21,428个代谢特征,其中基于与公共可用文库的片段化匹配鉴定了626个代谢物。总的来说,在这项研究中鉴定了2276种心脏代谢物,这些代谢物涵盖了广泛的极性,包括极性(苯,生物碱和衍生物和核苷)以及非极性(磷脂酰胆碱,酰基肉碱,和脂肪酸)化合物。这项研究的结果将提供有关选择适当的提取和MS检测方法的关键知识,以分析不同类别的人类心脏代谢物。
    The heart contracts incessantly and requires a constant supply of energy, utilizing numerous metabolic substrates such as fatty acids, carbohydrates, lipids, and amino acids to supply its high energy demands. Therefore, a comprehensive analysis of various metabolites is urgently needed for understanding cardiac metabolism; however, complete metabolome analyses remain challenging due to the broad range of metabolite polarities which makes extraction and detection difficult. Herein, we implemented parallel metabolite extractions and high-resolution mass spectrometry (MS)-based methods to obtain a comprehensive analysis of the human heart metabolome. To capture the diverse range of metabolite polarities, we first performed six parallel liquid-liquid extractions (three monophasic, two biphasic, and one triphasic extractions) of healthy human donor heart tissue. Next, we utilized two complementary MS platforms for metabolite detection - direct-infusion ultrahigh-resolution Fourier-transform ion cyclotron resonance (DI-FTICR) and high-resolution liquid chromatography quadrupole time-of-flight tandem MS (LC-Q-TOF MS/MS). Using DI-FTICR MS, 9,521 metabolic features were detected where 7,699 were assigned a chemical formula and 1,756 were assigned an annotated by accurate mass assignment. Using LC-Q-TOF MS/MS, 21,428 metabolic features were detected where 626 metabolites were identified based on fragmentation matching against publicly available libraries. Collectively, 2276 heart metabolites were identified in this study which span a wide range of polarities including polar (benzenoids, alkaloids and derivatives and nucleosides) as well as non-polar (phosphatidylcholines, acylcarnitines, and fatty acids) compounds. The results of this study will provide critical knowledge regarding the selection of appropriate extraction and MS detection methods for the analysis of the diverse classes of human heart metabolites.
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  • 文章类型: Journal Article
    在此探索收集手指汗液作为监测患者对抗精神病药物依从性的快速便捷方法。从接受氯氮平治疗的患者收集的手指汗液样本(n=426),喹硫平和奥氮平的液相色谱质谱分析,包括配对血浆样本的患者亚组。还分析了阴性对照组和仅使用抗精神病药物的患者的手指汗液样本。手指汗液测试(基于一个捐赠样品中母体药物的检测)在通常规定的给药范围内监测依从性方面是100%有效的。与仅处理药物的参与者相比,该测试可以通过监测药物代谢物来区分接触和给药,或母体药物的水平。此外,在服用氯氮平的患者亚组中,手指汗液中母体药物的质量与血浆浓度之间存在统计学上的显着相关性。手指出汗技术显示出一种有尊严的希望,非侵入性方法监测服用抗精神病药物患者的治疗依从性。
    Collection of finger sweat is explored here as a rapid and convenient way of monitoring patient adherence to antipsychotic drugs. Finger sweat samples (n = 426) collected from patients receiving treatment with clozapine, quetiapine and olanzapine were analysed by liquid chromatography mass spectrometry, including a subgroup of patients with paired plasma samples. Finger sweat samples were also analysed from a negative control group and patients who had handled antipsychotic medication only. The finger sweat test (based on the detection of parent drug in one donated sample) was 100% effective in monitoring adherence within commonly prescribed dosing ranges. In comparison to participants who handled the medication only, the test could distinguish between contact and administration through monitoring of the drug metabolite, or the level of parent drug. Additionally, in a subgroup of patients prescribed clozapine, a statistically significant correlation was observed between the mass of parent drug in finger sweat and plasma concentration. The finger sweat technology shows promise as a dignified, noninvasive method to monitor treatment adherence in patients taking antipsychotics.
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  • 文章类型: Journal Article
    Filipendulaulmaria,通常被称为草地甜食,是一种在欧洲广泛分布的野生草本开花植物。以前,一系列水杨酸衍生物和黄酮醇糖苷与乌尔马里亚的抗风湿和利尿特性有关。在目前的工作中,使用有效的基于NMR的去复制策略对来自F.ulmaria地上部分的水醇提取物进行了广泛的分析。该方法涉及通过离心分配色谱(CPC)对粗提取物进行分馏,馏分的13CNMR分析,整个NMR数据集的2D聚类映射,and,最后,使用天然代谢物数据库进行结构阐明,通过2DNMR数据解释和液相色谱与质谱联用验证。空中部分的化学多样性很广泛,明确鉴定了28种化合物,跨越各种生物合成类别。使用在正常人表皮角质形成细胞上进行的体外测定,筛选乌马属F.ulmaria提取物和CPC级分增强皮肤表皮屏障功能和皮肤更新性质的潜力。含有槲皮素的部分,山奈酚苷,熊果酸,Pomolicacid,柚皮苷,β-谷甾醇,发现TellimagrandinsI和II上调与皮肤屏障功能相关的基因,表皮更新,和应激反应。这项研究具有重要意义,因为它可以为改善水合作用和皮肤更新特性提供天然解决方案。
    Filipendula ulmaria, commonly known as meadowsweet, is a wild herbaceous flowering plant that is widely distributed in Europe. A range of salicylic acid derivatives and flavonol glycosides have been previously associated with the antirheumatic and diuretic properties of F. ulmaria. In the present work, a hydroalcoholic extract from F. ulmaria aerial parts was extensively profiled using an efficient NMR-based dereplication strategy. The approach involves the fractionation of the crude extract by centrifugal partition chromatography (CPC), 13C NMR analysis of the fractions, 2D-cluster mapping of the entire NMR dataset, and, finally, structure elucidation using a natural metabolite database, validated by 2D NMR data interpretation and liquid chromatography coupled with mass spectrometry. The chemodiversity of the aerial parts was extensive, with 28 compounds unambiguously identified, spanning various biosynthetic classes. The F. ulmaria extract and CPC fractions were screened for their potential to enhance skin epidermal barrier function and skin renewal properties using in vitro assays performed on Normal Human Epidermal Keratinocytes. Fractions containing quercetin, kaempferol glycosides, ursolic acid, pomolic acid, naringenin, β-sitosterol, and Tellimagrandins I and II were found to upregulate genes related to skin barrier function, epidermal renewal, and stress responses. This research is significant as it could provide a natural solution for improving hydration and skin renewal properties.
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  • 文章类型: Journal Article
    LC-MS分析中肽鉴定的准确性对于有关有助于生物标志物发现和复杂蛋白质组谱分析的蛋白质方面的信息至关重要。在串联质谱中检测肽碎片离子仍然具有挑战性,因为目前的工具没有创建或测试低丰度,在MS2数据中发现的肽的低峰片段。特征检测,LC-MS分析管道中的一个关键预处理步骤,通过质荷比对肽进行定量,保留时间,和强度,由于肽的重叠性质和通常无法与噪声区分的弱信号,因此特别具有挑战性,从而建立了对刚性数学结构和启发式的依赖。在这项研究中,我们开发了一种基于深度学习的模型,该模型具有创新的滑动窗口过程,可以对定量MS/MS数据进行高分辨率处理以进行MS2特征检测。实验结果表明,与现有的特征检测工具相比,我们的模型可以产生更准确的值和识别,以及量化的真实阳性特征的高比率。因此,我们相信我们的模型说明了深度学习技术应用于计算蛋白质组学的优势。
    Accuracy of peptide identification in LC-MS analysis is crucial for information regarding the aspects of proteins that aid in biomarker discovery and the profiling of complex proteomes. The detection of peptide fragment ions in tandem mass spectrometry is still challenging given that current tools were not created or tested for the low-abundance, low-peak fragments of peptides found in MS2 data. Feature detection, a crucial pre-processing step in the LC-MS analysis pipeline that quantifies peptides by their mass-to-charge ratio, retention time, and intensity, is particularly challenging due to the overlapping nature of peptides and weak signals that are often indistinguishable from noises, thus creating a reliance on rigid mathematical structures and heuristics. In this study, we developed a deep-learning-based model with an innovative sliding window process that enables high-resolution processing of quantitative MS/MS data to conduct MS2 feature detection. Experimental results show that our model can produce more accurate values and identifications than existing feature detection tools, as well as a high rate of true positive features quantified. Therefore, we believe that our model illustrates the advantages of deep learning techniques applied towards computational proteomics.
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