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  • 文章类型: Journal Article
    背景:临床观察性研究表明高血压是卒中的独立危险因素。此外,高血压和中风都有遗传倾向.然而,一级亲属中高血压和卒中之间的遗传关系尚不清楚.
    方法:使用跨孟德尔随机化(MR)方法验证了遗传效应。本研究中使用的全基因组关联研究汇总数据是从公开可用的平台获得的。采用的主要MR效应是方差逆加权(IVW),其他分析方法包括MR-Egger,加权中位数,简单模式,和加权模式。在进行MR分析之前,MR_PRESSO的测试,多功能性,并进行了异质性。
    结果:高血压家族史的存在对各种类型中风的遗传易感性有重要贡献,包括缺血性中风,蛛网膜下腔出血,腔隙中风,心脏栓塞性缺血性中风,小血管缺血性卒中,和大动脉粥样硬化相关的缺血性卒中。
    结论:简而言之,一级亲属的高血压对卒中风险有遗传影响.高血压和中风之间可能存在共同的遗传因素。
    BACKGROUND: Clinical observational study demonstrated that hypertension is an independent risk factor for stroke. Furthermore, both hypertension and stroke exhibit genetic predispositions. However, the genetic relationship between hypertension and stroke in first-degree relatives remains unclear.
    METHODS: The Genetic effects were validated using an across-Mendelian randomization (MR) approach. The Genome-Wide Association Study summary data used in this study were obtained from a publicly available platform. The primary MR effect employed was inverse-variance weighted (IVW), and the other analysis methods included MR-Egger, weighted median, simple mode, and weighted mode. Prior to MR analysis, tests for MR_PRESSO, pleiotropy, and heterogeneity were conducted.
    RESULTS: The presence of family history of hypertension significantly contributed to the genetic predisposition to various types of stroke, including ischemic stroke, subarachnoid hemorrhage, lacunar stroke, cardioembolic ischemic stroke, small vessel ischemic stroke, and large artery atherosclerosis-related ischemic stroke.
    CONCLUSIONS: Briefly, hypertension in first-degree relatives has a genetic impact on the risk of stroke development. Shared genetic factors may exist between hypertension and stroke.
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  • 文章类型: Journal Article
    绵羊是全球重要的食草动物,由于不同的地理和生态条件,中国本土绵羊品种在经济上有许多重大变化。特别是,由于数千年来天然和人工的选择压力,某些本地品种表现出明显的高产仔数表型,为研究绵羊的繁殖力提供了理想的动物模型。在这项研究中,对来自8个品种的60只绵羊的公开全基因组测序数据进行了选择性信号分析,以确定与产仔数相关的候选基因。结果显示,从所有绵羊中总共鉴定出34,065,017个单核苷酸多态性(SNP),和65个候选基因(CDGs)从配对固定指数之间的相互作用窗口和SNP的前1%精确定位(FST,>0.149543)和跨群体扩展单倍型纯合性(XP-EHH,>0.701551)。总共41个CDG(例如VRTN,EYA2和MCPH1)注释为576个GO术语,其中七个术语与卵泡和胚胎发育直接相关(例如TBXT,BMPR1B,和BMP2)。此外,73个KEGG通路由21个CDGs(例如ENTPD5、ABCD4和RXFP2)富集,主要与河马(TCF4,BMPR1B和BMP2)有关,TGF-β(BMPR1B和BMP2),PI3K-Akt(ITGB4、IL4R和PPP2R5A)和Jak-STAT信号通路(IL20RA和IL4R)。值得注意的是,在具有高产仔数性状的绵羊中,一系列CDG受到了强烈的选择。这些发现结果可以提高对绵羊产仔数遗传基础的理解。此外,它为未来的分子育种提供了有价值的CDGS。
    Sheep are important herbivorous domestic animal globally, and the Chinese indigenous sheep breed has a multitude of economically significant variations due to the diverse geographical and ecological conditions. In particular, certain native breeds exhibit a visible high litter size phenotype due to the selection pressure of natural and artificial for thousands of years, offering an ideal animal model for investigating sheep\'s fecundity. In this study, selective signal analysis was performed on public whole-genome sequencing data from 60 sheep across eight breeds to identify candidate genes related to litter size. Results revealed that a total of 34,065,017 single-nucleotide polymorphisms (SNPs) were identified from all sheep, and 65 candidate genes (CDGs) were pinpointed from the top 1% of interacted windows and SNPs between the pairwise fixation index (FST, >0.149543) and cross-population extended haplotype homozygosity (XP-EHH, >0.701551). A total of 41 CDGs (e.g. VRTN, EYA2 and MCPH1) were annotated to 576 GO terms, of which seven terms were directly linked to follicular and embryonic development (e.g. TBXT, BMPR1B, and BMP2). In addition, 73 KEGG pathways were enriched by 21 CDGs (e.g. ENTPD5, ABCD4 and RXFP2), mainly related to Hippo (TCF4, BMPR1B and BMP2), TGF-β (BMPR1B and BMP2), PI3K-Akt (ITGB4, IL4R and PPP2R5A) and Jak-STAT signalling pathways (IL20RA and IL4R). Notably, a series of CDGs was under strong selection in sheep with high litter size traits. These findings result could improve the comprehension of the genetic underpinnings of sheep litter size. Furthermore, it provides valuable CDGS for future molecular breeding.
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  • 文章类型: English Abstract
    Objective: To analyze the distribution characteristics of UGT1A1 mutant genes (including enhancers, promoters, and exons 1-5) and further explore the correlation between UGT1A1 genotype and clinical phenotypes in patients with inherited hyperunconjugated bilirubinemia. Methods: Patients diagnosed with hereditary hyperunconjugated bilirubinemia at Nanjing Second Hospital from June 2015 to December 2022 were retrospectively analyzed. The UGT1A1 gene was examined using Sanger sequencing in all patients. Complete blood count, liver function, and abdominal imaging examinations were performed. Comparison of categorical variable data using χ(2) testor Fisher percision tests. Comparison of continaous veriable data with normal distribution using t-test. Results: 112 cases (male:female ratio 81:31, aged 9-70 years) had inherited hyperunconjugated bilirubinemia, with a total of 14 mutation sites identified, of which seven were confirmed mutations, and the frequency ranged from high to low: (TA)n accounted for 50%, c.211G>A (p.G71R) accounted for 49.10%, 1456T>G (p.Y486D) accounted for 16.96%, c.686C>A (p.R229W) accounted for 12.5%, 1091C>T (p.P364L) accounted for 8.04%, and c- 3279T>G accounted for 0.982%. Simultaneously, all patients had one to four mutations, of which only one mutation was the most common (55.36%), followed by two mutations (37.5%), and rare three and four mutations (5.36% and 1.78%). There was no statistical significance in total bilirubin (TBil) levels among the four groups (F=0.652, P=0.583). One mutation was most common in (TA)n and c.211G>A (p.G71R), among which TA6/TA7 (n=10) and TA7/TA7 (n=14) mutations were statistically significant in TBil (t=2.143, P=0.043). The c.211G>A (p.G71R) heterozygous (n=9) and isolated (n=15) mutation had no statistical significance in TBil (t=0.382, P=0.706). The GS group accounted for 75%, the intermediate group accounted for 16.9%, and the CNS-Ⅱ group accounted for 8%. TBil was statistically significant among the three groups (F=270.992, P<0.001). There was no statistically significant difference (χ(2)=3.317, P=0.19) between mutation 1 (44 cases, 14 cases, and 4 cases, respectively) and mutations ≥ 2 (40 cases, 5 cases, and 5 cases, respectively) in the GS group, intermediate group, and CNS-II group. Conclusion: The number of UGT1A1 gene mutation sites may have no synergistic effect on TBil levels in patients with inherited hyperunconjugated bilirubinemia. TA7/TA7 mutations are not uncommon, and TBil levels are relatively high.
    目的: 分析遗传性高非结合性胆红素血症患者尿苷二磷酸葡萄糖醛酸转移酶(UGT1A1)突变基因(包括增强子、启动子、外显子1~5)分布特征,探讨UGT1A1基因型与临床表型的关系。 方法: 回顾性分析2015年6月至2022年12月在南京市第二医院诊断为遗传性高非结合性胆红素血症的患者资料。患者均采用Sanger测序对UGT1A1基因进行检测,完成血常规、肝生物化学、腹部影像学检查。分类变量资料比较采用χ (2)检验或fisher精准检验;正态分布连续变量资料比较用t检验。 结果: 112例(男∶女为81∶31,年龄9~70岁)遗传性高非结合性胆红素血症患者,共查出14个突变位点,7个为已证实的突变,频率由高到低;(TA)n占50%、c.211G > A(p.G71R)占49.10%、1456T > G(p.Y486D)占16.96%、c.686C > A(p.R229W)占12.5%、1091C > T(p.P364L)占8.04%、c.-3279T > G占0.982%。所有患者同时存在1~4个突变,其中只有1个突变病例最多见(55.36%),其次为2个突变(37.5%),3和4个突变较为少见(分别为5.36%,1.78%);4组间总胆红素(TBil)水平差异无统计学意义(F = 0.652,P = 0.583)。一个突变以(TA)n和c.211G > A(p.G71R)最多见,其中TA6/TA7 (n = 10)与TA7/TA7 (n = 14)突变患者TBil差异有统计学意义(t = 2.143,P = 0.043)。c.211G > A(p.G71R)杂合(n = 9)与纯合(n = 15)突变的TBil差异无统计学意义(t  = 0.382,P = 0.706)。GS组占75%,中间组占16.9%,CNS-Ⅱ组占8%,3组TBil差异有统计学意义(F = 270.992,P < 0.001);GS组、中间组、CNS-Ⅱ组中1个突变(分别为44、14、4例)与≥2个突变(分别为40、5、5例)差异无统计学意义(χ (2) = 3.317,P = 0.19)。 结论: 遗传性高非结合性胆红素血症患者UGT1A1基因变异位点数量对TBil水平可能无叠加作用。TA7/TA7突变并不少见,TBil水平较高。.
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  • 文章类型: Journal Article
    近年来,近视患病率逐渐上升,它已经成为21世纪一个重大的全球公共卫生问题,对人类的眼睛健康构成了严峻的挑战。目前,证实近视的发展归因于基因和环境因素的共同作用。因此,阐明近视的危险因素和发病机制对预防和控制近视具有重要意义。为了阐明基因-环境相互作用对近视的影响,我们使用Pubmed数据库搜索与近视相关的文献.搜索词如下:近视,基因,环境因素,基因-环境相互作用,和治疗。本文综述了基因和环境相互作用对近视的影响。
    In recent years, the prevalence of myopia has gradually increased, and it has become a significant global public health problem in the 21st century, posing a serious challenge to human eye health. Currently, it is confirmed that the development of myopia is attributed to the combined action of genes and environmental factors. Thus, elucidating the risk factors and pathogenesis of myopia is of great significance for the prevention and control of myopia. To elucidate the impact of gene-environment interaction on myopia, we used the Pubmed database to search for literature related to myopia. Search terms are as follows: myopia, genes, environmental factors, gene-environment interaction, and treatment. This paper reviews the effects of gene and environmental interaction on myopia.
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  • 文章类型: Case Reports
    Townes-Brocks综合征(TBS)是一种常染色体显性疾病,其特征是肛门直肠三联症,拇指,和耳朵畸形。它也可能伴随着肾脏的缺陷,心,眼睛,听力,和脚。TBS已被证明是由SALL1基因中的杂合变体产生的,它编码锌指蛋白,被认为是转录抑制因子。描述了来自中国家庭的非典型TBS表型患者的临床特征,主要表现包括外耳发育不良,单侧肾发育不全伴轻度肾功能不全,和听力障碍。一种新的杂合变体c.3060T>A(p。在该先证中鉴定了SALL1基因外显子2中的Tyr1020*)。先证者互补DNA的焦磷酸测序显示,变异体转录本占外周白细胞总转录本的48%,表明该变体转录物没有经历无义介导的mRNA衰减。这个变异c.3060T>A位于外显子2的末端,靠近SALL1基因的3'末端,并对蛋白质功能产生相对较小的影响。我们建议在先证中观察到的非典型TBS表型可能归因于保留部分SALL1功能的截短蛋白。
    Townes-Brocks syndrome (TBS) is an autosomal dominant disorder characterised by the triad of anorectal, thumb, and ear malformations. It may also be accompanied by defects in kidney, heart, eyes, hearing, and feet. TBS has been demonstrated to result from heterozygous variants in the SALL1 gene, which encodes zinc finger protein believed to function as a transcriptional repressor. The clinical characteristics of an atypical TBS phenotype patient from a Chinese family are described, with predominant manifestations including external ear dysplasia, unilateral renal hypoplasia with mild renal dysfunction, and hearing impairment. A novel heterozygous variant c.3060T>A (p.Tyr1020*) in exon 2 of the SALL1 gene was identified in this proband. Pyrosequencing of the complementary DNA of the proband revealed that the variant transcript accounted for 48% of the total transcripts in peripheral leukocytes, indicating that this variant transcript has not undergone nonsense-mediated mRNA decay. This variant c.3060T > A is located at the terminal end of exon 2, proximal to the 3\' end of the SALL1 gene, and exerts a relatively minor impact on protein function. We suggest that the atypical TBS phenotype observed in the proband may be attributed to the truncated protein retaining partial SALL1 function.
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  • 文章类型: Case Reports
    反复发作的发热是常染色体显性遗传的肿瘤坏死因子受体相关周期性综合征(TRAPS)的特征。TRAPS患者的主要症状包括长时间发烧,腹痛,肌肉疼痛,还有皮疹.西方国家的TRAPS患病率高于亚洲国家。在这里,我们介绍了一个13岁女孩的病例,她经历了8年的间歇性发烧,每两年发生一次。患者表现出周期性发烧,头痛,呕吐,皮疹,在疾病过程中炎症标志物水平升高。通过她的基因组DNA的直接DNA测序鉴定杂合C55Y突变。该突变位于TNFRSF1A的外显子4中。对她的姐姐和母亲的遗传研究表明,他们拥有C55Y杂合突变,但没有任何临床症状。而父亲没有。Further,我们对文献进行了全面评估,并汇总了8例TRAPS病例系列的资料.
    Recurring episodes of fever characterize tumor necrosis factor receptor-associated periodic syndrome (TRAPS) which is autosomal dominant. The primary symptoms of patients with TRAPS include prolonged fever, abdominal pain, muscle pain, and skin rashes. The prevalence of TRAPS appeared higher in Western countries than in Asian countries. Herein, we present the case of a 13-year-old girl who experienced intermittent fever for 8 years, with episodes that occur every 2 years. The patient demonstrated periodic fever, headache, vomiting, rash, and elevated inflammatory marker levels during the disease course. A heterozygous C55Y mutation was identified via a direct DNA sequencing of her genomic DNA. This mutation is located in exon 4 of TNFRSF1A. Genetic studies of her sister and mother revealed that they possessed the C55Y heterozygous mutation without demonstrating any clinical signs, while the father did not. Further, we conducted a thorough assessment of the literature and compiled the information from the eight TRAPS case series.
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  • 文章类型: Journal Article
    神经学家很难识别散发性小脑共济失调。小脑型多系统萎缩(MSA-C),自发性晚期皮质小脑萎缩,和长时间饮酒是几个可能的原因。在一群不是MSA-C的偶发性小脑共济失调患者中,最近发现了一种常染色体显性遗传脊髓小脑共济失调(SCA)突变.中国单医院队列将在这项研究中用于SCA相关基因的遗传筛选。在8年内监测了一百四十名CA患者。31个人患有家族性CA,109例患者有散发性CA,73有MSA-C,36例有非MSA-C散发性CA。在31例非MSA-C散发性患者中,有28例要求进行测试,我们进行了基因分析,包括SCA1,SCA2,SCA3,SCA6,SCA7,SCA8,SCA12,SCA17,SCA31和牙髓鞘萎缩(DRPLA)。对照组由患者家属组成。在57%的自发CA不是MSA-C的情况下,基因异常被发现。散发性CA患者中最常见的例外是SCA6(36%),其次是SCA1、2、3、8和DRPLA中的怪物。相比之下,75%的家族性CA患者存在基因异常,其中最常见的是SCA6异常.69岁比59岁更高,CAG重复长度为23岁,而前者为25岁,而SCA6异常是散发性而不是家族性病例。在零星的CA中,SCA基因中的常染色体显性突变,特别是在SCA6中,很常见。尽管SCA6突变发生率增加的原因尚不清楚,这可能与更大的发病年龄和SCA6突变的外显率有关。
    Neurologists have a difficult time identifying sporadic cerebellar ataxia. Multiple system atrophy of the cerebellar type (MSA-C), spontaneous late cortical cerebellar atrophy, and prolonged alcohol use are a few possible causes. In a group of people with sporadic cerebellar ataxia that was not MSA-C, an autosomal-dominant spinocerebellar ataxia (SCA) mutation was recently discovered. Chinese single-hospital cohort will be used in this study to genetic screen for SCA-related genes. One hundred forty individuals with CA were monitored over 8 years. Thirty-one individuals had familial CA, 109 patients had sporadic CA, 73 had MSA-C, and 36 had non-MSA-C sporadic CA. In 28 of the 31 non-MSA-C sporadic patients who requested the test, we carried out gene analysis, including SCA1, SCA2, SCA3, SCA6, SCA7, SCA8, SCA12, SCA17, SCA31, and dentatorubro-pallidoluysian atrophy (DRPLA). The control group consisted of family members of the patients. In 57% of the instances with spontaneous CA that were not MSA-C, gene abnormalities were discovered. The most frequent exception among individuals with sporadic CA was SCA6 (36%), followed by monsters in SCA1, 2, 3, 8, and DRPLA. In contrast, 75% of the patients with familial CA had gene abnormalities, the most frequent of which was SCA6 abnormality. The age of 69 vs 59 was higher, and the CAG repeat length was a minor age of 23 vs 25 in the former instances compared to the last one among individuals with SCA6 anomalies that were sporadic as opposed to familial cases. In sporadic CA, autosomal-dominant mutations in SCA genes, notably in SCA6, are common. Although the cause of the increased incidence of SCA6 mutations is unknown, it may be related to a greater age of onset and varied penetrance of SCA6 mutations.
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  • 文章类型: Journal Article
    目的:这项研究的目的是评估配偶选择与DNA中的短串联重复序列(STRs)和指尖脑膜数量的相关性,以研究遗传在配偶选择中的作用。
    方法:我们随机选取了286对夫妻(夫妻)作为夫妻组,同时选取了200个配对对象(男性与女性随机配对作为一对对象)作为非配偶组进行DNA分型,并调查择偶中的精神科,共选择554对夫妇作为一对夫妇组,选择500对受试者作为对照组。
    结果:观察到配偶组和非配偶组之间的STR匹配数存在显着差异(较大的值意味着更高的遗传相似性)(12.3±2.7vs.11.8±2.6;p<0.05)。Lunula匹配数的显着差异(配对受试者之间的Lunula计数差异,较低的值意味着较高的遗传相似性)也观察到两组之间的肺计数(1.55±1.88与3.53±2.40;p<0.01)。
    结论:在夫妇和多态STR之间发现了显着和前所未有的关系,在择偶和脑瘤之间。多态STR和指尖脑膜计数提供了对遗传特征可能在配偶选择中起关键作用的潜在重要贡献的初步见解。
    OBJECTIVE: The aim of this study was to assess the correlation of spouse selection with short tandem repeats (STRs) in DNA and with the number of fingertip lunulae to investigate the role of heredity in spouse selection.
    METHODS: We randomly selected a total of 286 couples (husband and wife) as a couple group while 200 paired subjects (a man randomly matched with a woman as a pair of subjects) were selected as a non-spouse group for DNA typing, and to investigate lunulae in spouse selection, a total of 554 couples were selected as a couple group and 500 pairs of subjects were selected as a control group.
    RESULTS: A significant difference of STR matching number (a large value implies a higher genetic similarity) between spouse group and non-spouse group were observed (12.3 ± 2.7 vs. 11.8 ± 2.6; p < 0.05). A significant difference of the lunula matching number (difference of lunula counts between a paired subjects, a lower value implies a higher genetic similarity) between two groups were also observed for the lunula counts (1.55 ± 1.88 vs. 3.53 ± 2.40; p < 0.01).
    CONCLUSIONS: Significant and unprecedented relationships were found between the couples and polymorphic STRs, and between spouse selection and lunula counts. Polymorphic STRs and fingertip lunulae counts provide an initial insight into the potentially important contributions that genetic characteristics may play a key role in spouse selection.
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  • 文章类型: Journal Article
    目的:我们的主要目的是使用注意力网络测试(ANT)调查自闭症谱系障碍(ASD)儿童父母的注意力网络功能。次要目标是观察所有参与者的三个注意力网络是否彼此相关。
    方法:我们纳入了28名ASD儿童的父母和28名匹配良好的典型发育儿童的父母。所有参与者都接受了神经心理学评估和ANT测试。三个不同的注意力网络,包括警报,定向,和执行控制,也被测量了。
    结果:与对照组相比,ASD儿童的父母表现出效率较低的警报和执行控制网络(所有p<0.05),但不是定向网络(p=0.74)。警报之间没有发现显著的相关性,定向,和任何一组的执行控制网络。
    结论:我们的研究结果表明,ASD儿童的父母在警觉和执行控制注意功能方面存在缺陷。缺陷是广泛的自闭症表型的迹象。
    OBJECTIVE: We primarily aimed to investigate the attention network function among parents of children with autism spectrum disorder (ASD) using the Attention Network Test (ANT). The secondary objective was to observe whether the three attention networks of all participants were related to each other.
    METHODS: We included 28 parents of children with ASD and 28 well-matched parents of typically developing children. All participants underwent the neuropsychological assessment and ANT test. The three distinct attention networks, including alerting, orienting, and executive control, were also measured.
    RESULTS: Compared with controls, parents of children with ASD showed less-efficient alerting and executive control network (all p<0.05), but not orienting network (p=0.74). No significant correlation was found between the alerting, orienting, and executive control network for either group.
    CONCLUSIONS: Our findings showed that parents of children with ASD had deficits in alerting and executive control attention functions. The deficits are indications of a broad autism phenotype.
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