co-culture

共同文化
  • 文章类型: Journal Article
    卤化有机化合物是对人类健康和生态系统安全构成严重威胁的持久性污染物。钴酰胺是有机卤化物呼吸细菌(OHRB)中还原性脱卤酶(RDase)的必需辅因子,催化脱卤过程。本文系统地总结了cobamides对有机卤化物呼吸作用的影响。还讨论了钴胺在脱卤过程中的催化过程。此外,我们检查OHRB,不能合成cobamide,必须通过救助途径从环境中获得;与cobamide生产者的共培养更有益和可能。这篇综述旨在帮助读者更好地了解cobamides在还原脱卤中的重要性和功能。所提供的信息可以帮助制定生物修复策略。
    Halogenated organic compounds are persistent pollutants that pose a serious threat to human health and the safety of ecosystems. Cobamides are essential cofactors for reductive dehalogenases (RDase) in organohalide-respiring bacteria (OHRB), which catalyze the dehalogenation process. This review systematically summarizes the impact of cobamides on organohalide respiration. The catalytic processes of cobamide in dehalogenation processes are also discussed. Additionally, we examine OHRB, which cannot synthesize cobamide and must obtain it from the environment through a salvage pathway; the co-culture with cobamide producer is more beneficial and possible. This review aims to help readers better understand the importance and function of cobamides in reductive dehalogenation. The presented information can aid in the development of bioremediation strategies.
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  • 文章类型: Journal Article
    巨噬细胞,作为肿瘤组织中最大的免疫细胞群,在影响肿瘤细胞的各种恶性行为和肿瘤免疫逃避中起着至关重要的作用。随着巨噬细胞和癌症免疫治疗研究的发展,适当的研究模型的重要性变得越来越明显。类器官的发展弥合了传统二维(2D)培养和动物实验之间的差距。最近的研究表明,类器官表现出与来源组织相似的生理特征,并且与来源组织或器官的体内基因组和分子标记非常相似。然而,类器官仍然缺乏免疫成分。开发类器官和巨噬细胞的共培养模型对于研究肿瘤细胞和巨噬细胞之间的相互作用和机制至关重要。本文概述了合作文化模式的建立,类器官巨噬细胞相互作用的研究现状,以及免疫治疗的现状。此外,说明了该模型的应用前景和不足之处。最终,希望共培养模型将提供一个临床前测试平台,以最大限度地提高精确的癌症免疫治疗策略。
    Macrophages, as the largest immune cell group in tumour tissues, play a crucial role in influencing various malignant behaviours of tumour cells and tumour immune evasion. As the research on macrophages and cancer immunotherapy develops, the importance of appropriate research models becomes increasingly evident. The development of organoids has bridged the gap between traditional two-dimensional (2D) cultures and animal experiments. Recent studies have demonstrated that organoids exhibit similar physiological characteristics to the source tissue and closely resemble the in vivo genome and molecular markers of the source tissue or organ. However, organoids still lack an immune component. Developing a co-culture model of organoids and macrophages is crucial for studying the interaction and mechanisms between tumour cells and macrophages. This paper presents an overview of the establishment of co-culture models, the current research status of organoid macrophage interactions, and the current status of immunotherapy. In addition, the application prospects and shortcomings of the model are explained. Ultimately, it is hoped that the co-culture model will offer a preclinical testing platform for maximising a precise cancer immunotherapy strategy.
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  • 文章类型: Journal Article
    养殖肉,一种新兴的肉类生产技术,减少了环境负担,并提供了更健康,更可持续的肉类养殖方法。养殖肉类中的脂肪对增强质地至关重要,味道,和温柔。然而,目前的培养肉生产方法仅限于单细胞型。为了满足消费者对养殖肉制品的需求,开发生产同时含有肌肉和脂肪的养殖肉制品的新方法至关重要。在这项研究中,通过控制肌细胞和脂肪细胞的比例和培养条件来促进细胞的活力和分化。养殖肉的总消化率超过37%,高于牛肉(34.7%)。此外,纹理,外观,并且改善了共培养肉的味道。总的来说,这项研究对制备营养丰富且能消化的养殖肉类有很大的希望。
    Cultured meat, an emerging meat production technology, has reduced environmental burden as well as provide healthier and more sustainable method of meat culture. Fat in cultured meat is essential for enhancing texture, taste, and tenderness. However, current cultured meat production method is limited to single-cell type. To meet the consumer demands for cultured meat products, it is crucial to develop new methods for producing cultured meat products that contain both muscle and fat. In this study, cell viability and differentiation were promoted by controlling the ratio and cultivation conditions of myocytes and adipocytes. The total digestibility of cultured meat exceeded 37%, higher than that of beef (34.7%). Additionally, the texture, appearance, and taste of the co-cultured meat were improved. Collectively, this research has great promise for preparing rich-nutritious and digestion cultured meat.
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  • 文章类型: Journal Article
    PLA/PBAT-ST20的利用率不断提高,存在潜在的生态风险,这源于其随意处置和不完全降解。为了解决这个问题,这项研究调查了PLA/PBAT-ST20的降解能力,通过包含两种嗜热细菌的共培养系统,从堆肥的嗜热阶段选择并鉴定的假单胞菌G1和KocuriaG2。结构表征结果表明,菌株定植于PLA/PBAT-ST20的表面,造成孔和裂缝,随着羰基指数(CI)和多分散指数(PDI)的增加,表明氧化降解。酶活性结果表明,共培养系统显着增强了蛋白酶和脂肪酶的分泌和活性,促进酯键的分解。LC-QTOF-MS结果表明,降解后得到各种中间产物,最终参与TCA周期(ko00020),进一步完全矿化。此外,经过15天的堆肥,共培养系统对PBAT/PLA-ST20薄膜的降解率为72.14±2.1wt%,随着各种大小的塑料碎片的数量减少,证明PLA/PBAT-ST20薄膜的有效降解。这项研究强调了嗜热细菌通过生物降解解决塑料污染的潜力,并强调共培养系统可以作为修复PLA/PBAT塑料的理想解决方案。
    The rising utilization of PLA/PBAT-ST20 presents potential ecological risks stemming from its casual disposal and incomplete degradation. To solve this problem, this study investigated the degradation capabilities of PLA/PBAT-ST20 by a co-culture system comprising two thermophilic bacteria, Pseudomonas G1 and Kocuria G2, selected and identified from the thermophilic phase of compost. Structural characterization results revealed that the strains colonized the PLA/PBAT-ST20\'s surface, causing holes and cracks, with an increase in the carbonyl index (CI) and polydispersity index (PDI), indicating oxidative degradation. Enzyme activity results demonstrated that the co-culture system significantly enhanced the secretion and activity of proteases and lipases, promoting the breakdown of ester bonds. LC-QTOF-MS results showed that various intermediate products were obtained after degradation, ultimately participating in the TCA cycle (ko00020), further completely mineralized. Additionally, after 15-day compost, the co-culture system achieved a degradation rate of 72.14 ± 2.1 wt% for PBAT/PLA-ST20 films, with a decrease in the abundance of plastic fragments of all sizes, demonstrating efficient degradation of PLA/PBAT-ST20 films. This study highlights the potential of thermophilic bacteria to address plastic pollution through biodegradation and emphasizes that the co-culture system could serve as an ideal solution for the remediation of PLA/PBAT plastics.
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  • 文章类型: Journal Article
    目的:骨肉瘤是一种缺乏最佳临床治疗方案的原发性骨肿瘤。肿瘤微环境中的肿瘤相关巨噬细胞与肿瘤的发展和转移密切相关。研究已经确定具有胶原结构的巨噬细胞受体(MARCO)是在巨噬细胞中表达的特异性受体。本研究旨在研究抗MARCOmAb治疗是否可以诱导肿瘤微环境中的巨噬细胞极化并引起抗肿瘤作用。
    方法:THP-1细胞用20ng/mL佛波醇12-肉豆蔻酸酯13-乙酸酯和80ng/mL白介素-4处理48小时,以诱导巨噬细胞极化为交替活化的巨噬细胞(M2)。酶联免疫吸附测定,实时定量聚合酶链反应,流式细胞术,和生物信息学分析进行评估巨噬细胞极化。共培养组包括一个空白组,M2巨噬细胞和U2OS共培养组,和抗MARCOmAb处理的M2巨噬细胞组。细胞活力测定,细胞划痕测试,凋亡,进行细胞周期分析以确定抗MARCOmAb处理的巨噬细胞对骨肉瘤细胞的作用。
    结果:证明了抗MARCOmAb可以驱动巨噬细胞向经典激活的巨噬细胞(M1)极化。抗MARCO单克隆抗体促进巨噬细胞分泌促炎因子,包括肿瘤坏死因子-α(TNF-α),白细胞介素-1β,白细胞介素-6和白细胞介素-23.对体外共培养模型的研究表明,用抗MARCOmAb处理的巨噬细胞可以抑制骨肉瘤细胞的生长和迁移,诱导细胞凋亡,并通过巨噬细胞的M1极化抑制骨肉瘤细胞的细胞周期进程。
    结论:抗MARCOmAb治疗通过影响巨噬细胞向M1巨噬细胞的极化发挥抗骨肉瘤作用,为治疗骨肉瘤提供了一种潜在的新治疗方法。
    OBJECTIVE: Osteosarcoma is a primary bone tumor lacking optimal clinical treatment options. Tumor-associated macrophages in the tumor microenvironment are closely associated with tumor development and metastasis. Studies have identified the macrophage receptor with collagenous structure (MARCO) as a specific receptor expressed in macrophages. This study aimed to investigate whether anti-MARCO mAb treatment can induce macrophage polarization in the tumor microenvironment and elicit anti-tumor effects.
    METHODS: THP-1 cells were treated with 20 ng/mL phorbol 12-myristate 13-acetate and 80 ng/mL interleukin-4 for 48 h to induce macrophage polarization to alternatively activated macrophages (M2). Enzyme-linked immunosorbent assay, real-time quantitative polymerase chain reaction, flow cytometry, and bioinformatic analyses were performed to evaluate macrophage polarization. The co-culture groups included a blank group, an M2 macrophage and U2OS co-culture group, and an anti-MARCO mAb-treated M2 macrophage group. Cell viability assays, cell scratch tests, apoptosis, and cell cycle analyses were performed to determine the effects of anti-MARCO mAb-treated macrophages on osteosarcoma cells.
    RESULTS: It was demonstrated that anti-MARCO mAb can drive macrophages toward classically activated macrophage (M1) polarization. Anti-MARCO mAb promoted the secretion of pro-inflammatory factors by macrophages, including tumor necrosis factor-alpha (TNF-α), interleukin-1beta, interleukin-6 and interleukin-23. Studies on in vitro co-culture models have revealed that macrophages treated with anti-MARCO mAb can suppress the growth and migration of osteosarcoma cells, induce cell apoptosis, and inhibit cell cycle progression of osteosarcoma cells through M1 polarization of macrophages in vitro.
    CONCLUSIONS: Anti-MARCO mAb treatment exerts anti-osteosarcoma effects by affecting macrophage polarization toward M1 macrophages, offering a potential new therapeutic approach for treating osteosarcoma.
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  • 文章类型: Journal Article
    通过实施复苏促进因子(Rpfs)对活的但不可培养的(VBNC)细菌进行的调查扩大了分离能够降解多氯联苯(PCB)的菌株的潜在来源。尽管如此,关于复苏菌株的功效以及通过共培养可能改善其性能的研究有限。在这项工作中,复苏菌株的PCB降解潜力,特别是假单胞菌。HR1和无色杆菌属。HR2,以及它们的共同文化,被调查。特别重要的是最佳共培养物和单个菌株之间关于它们降解PCB同源物和矿化中间代谢物的能力的比较分析。结果表明,复苏菌株HR1和HR2表现出Aroclor1242的强劲生长和有效降解。与单个菌株相比,共培养物CO13的最佳HR1与HR2之比为1:3,在PCB降解和中间代谢物矿化方面表现出显着改善。功能基因和降解代谢产物的分析表明,单个菌株和共培养物CO13均通过HOPDA-苯甲酸盐途径降解多氯联苯,然后通过原儿茶酸的间位和邻位切割途径矿化,以及邻苯二酚的邻位切割途径。这项研究代表了通过复苏菌株的共培养改善PCB降解的第一份文件,这突出了这些复苏菌株及其共培养物作为增强生物修复的有效生物接种剂的巨大前景。
    The investigation into viable but non-culturable (VBNC) bacteria through the implementation of resuscitation promoting factors (Rpfs) has broadened the potential sources for isolating strains capable of degrading polychlorinated biphenyls (PCBs). Nonetheless, there has been limited research on the efficacy of resuscitated strains and the potential improvement of their performance through co-cultivation. In this work, the PCB degradation potential of resuscitated strains, specifically Pseudomonas sp. HR1 and Achromobacter sp. HR2, as well as their co-cultures, was investigated. Of particular importance was the comparative analysis between the optimal co-culture and individual strains regarding their ability to degrade PCB homologs and mineralize intermediate metabolites. The results suggested that the resuscitated strains HR1 and HR2 demonstrated robust growth and effective degradation of Aroclor 1242. The co-culture CO13, with an optimal HR1 to HR2 ratio of 1:3, exhibited a remarkable improvement in PCB degradation and intermediate metabolite mineralization compared to individual strains. Analysis of functional genes and degradation metabolites revealed that both the individual strains and co-culture CO13 degraded PCBs via the HOPDA-benzoate pathway, then mineralized through protocatechuate meta- and ortho-cleavage pathways, as well as the catechol ortho-cleavage pathway. This study represents the first documentation of the improved PCB degradation through the co-cultivation of resuscitated strains, which highlights the great promise of these resuscitated strains and their co-cultures as effective bio-inoculants for enhanced bioremediation.
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  • 文章类型: Journal Article
    海洋链霉菌拥有许多具有可开发潜力的生物合成基因簇(BGC)。然而,许多次生代谢产物不能在实验室条件下产生。海洋微生物的共培养策略已经产生了具有多种生物活性的新型天然产物。在这项研究中,我们探索了涉及链霉菌属的共培养物的代谢谱。2-85和枝孢子菌。3-22-来自海洋海绵。将全球天然产品社会(GNPS)分子网络分析与天然产品数据库挖掘相结合,检测到35种潜在的抗菌代谢物,其中19个是共同文化独有的,产量大幅增加。值得注意的是,链霉菌-真菌相互作用导致疏螺旋体素产量增加,并通过分子网络发现了几种类似物。在这项研究中,borrelidin最初被应用于对抗寄生虫,导致水产养殖中的腐殖质病。我们注意到与商业杀菌剂相比,它对菌丝体生长的优异抑制作用,EC50为0.004mg/mL,对孢子萌发的EC50为0.005mg/mL。初步确定苏氨酸-tRNA合成酶为其靶标。对相关基因簇的进一步分析揭示了一个不完整的合成途径,在该菌株中缺少丙二酰辅酶A单元进行缩合。暗示存在潜在的补偿途径。总之,我们的发现揭示了海洋链霉菌和真菌在共培养中的代谢变化,提出了疏螺旋体蛋白在控制水生疾病中的潜力,并提出了抗真菌应用的新前景。
    The marine Streptomyces harbor numerous biosynthetic gene clusters (BGCs) with exploitable potential. However, many secondary metabolites cannot be produced under laboratory conditions. Co-culture strategies of marine microorganisms have yielded novel natural products with diverse biological activities. In this study, we explored the metabolic profiles of co-cultures involving Streptomyces sp. 2-85 and Cladosporium sp. 3-22-derived from marine sponges. Combining Global Natural Products Social (GNPS) Molecular Networking analysis with natural product database mining, 35 potential antimicrobial metabolites annotated were detected, 19 of which were exclusive to the co-culture, with a significant increase in production. Notably, the Streptomyces-Fungus interaction led to the increased production of borrelidin and the discovery of several analogs via molecular networking. In this study, borrelidin was first applied to combat Saprolegnia parasitica, which caused saprolegniosis in aquaculture. We noted its superior inhibitory effects on mycelial growth with an EC50 of 0.004 mg/mL and on spore germination with an EC50 of 0.005 mg/mL compared to the commercial fungicide, preliminarily identifying threonyl-tRNA synthetase as its target. Further analysis of the associated gene clusters revealed an incomplete synthesis pathway with missing malonyl-CoA units for condensation within this strain, hinting at the presence of potential compensatory pathways. In conclusion, our findings shed light on the metabolic changes of marine Streptomyces and fungi in co-culture, propose the potential of borrelidin in the control of aquatic diseases, and present new prospects for antifungal applications.
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  • 文章类型: Journal Article
    细胞共培养技术旨在研究细胞间的通讯机制,更好地揭示细胞生长等过程中所涉及的相互作用和调控机制,分化,凋亡,和其他细胞活动。这是通过模拟复杂的生物环境来实现的。此类研究对于理解多细胞生物的生理和病理过程具有重要意义。作为一种新兴的细胞培养技术,3D细胞共培养技术,基于微流控芯片,可以有效地,迅速,并准确实现细胞共培养。这是通过利用微流体芯片的独特微通道结构和流动特性来实现的。该技术可以模拟细胞生长的天然微环境,为研究细胞间通信提供了新的技术平台。它已被广泛应用于肿瘤学的研究,免疫学,神经科学,和其他领域。在这次审查中,我们总结并提供了对微流控芯片上细胞共培养系统设计的见解,共培养系统中使用的检测方法,以及这些模型的应用。
    Cell co-culture technology aims to study the communication mechanism between cells and to better reveal the interactions and regulatory mechanisms involved in processes such as cell growth, differentiation, apoptosis, and other cellular activities. This is achieved by simulating the complex organismic environment. Such studies are of great significance for understanding the physiological and pathological processes of multicellular organisms. As an emerging cell cultivation technology, 3D cell co-culture technology, based on microfluidic chips, can efficiently, rapidly, and accurately achieve cell co-culture. This is accomplished by leveraging the unique microchannel structures and flow characteristics of microfluidic chips. The technology can simulate the native microenvironment of cell growth, providing a new technical platform for studying intercellular communication. It has been widely used in the research of oncology, immunology, neuroscience, and other fields. In this review, we summarize and provide insights into the design of cell co-culture systems on microfluidic chips, the detection methods employed in co-culture systems, and the applications of these models.
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  • 文章类型: Journal Article
    柴胡皂苷D(SSd)是一种天然活性产品,在柴胡中具有很强的药理活性。研究表明,内生真菌作为天然药物来源具有巨大潜力。尖孢镰刀菌(CHS3),一种产SSd的内生真菌,从B.scorzonerifolium分离。为了阐明宿主植物对CHS3中SSd产生的影响,将CHS3与B.scorzonerifolium的悬浮细胞共培养,并使用高效液相色谱(HPLC)检测SSd。使用IlluminaHiSeq2500平台进行共培养之前和之后的CHS3的转录组测序(RNA-Seq)。结果表明,CHS3合成的SSd含量在与枯草芽孢杆菌悬浮细胞共培养后增加。用差异表达基因(DEGs)对CHS3进行转录组分析,结果显示1202和1049基因上调和下调,分别,在共同文化之后。与SSd合成相关的30个基因和与萜烯主链生物合成相关的11个基因被注释到京都基因和基因组百科全书(KEGG)中。结合转录组数据,据推测,甲羟戊酸(MVA)途径是CHS3中SSd合成的可能途径,并且关键酶基因(HMGR,HMGCS,GGPS1、MVK、FDFT1,FNTB)通过qRT-PCR进行验证。总之,内生真菌CHS3可以与其宿主形成互动关系,从而通过上调生物合成途径中关键酶基因的表达来促进SSd的生物合成和积累。
    Saikosaponin D (SSd) is a naturally active product with strong pharmacological activity found in Bupleurum scorzonerifolium Willd. Studies have shown that endophytic fungi have great potential as sources of natural medicines. Fusarium acuminatum (CHS3), an SSd-producing endophytic fungus, was isolated from B. scorzonerifolium. To elucidate the effect of host plants on the production of SSd in CHS3, CHS3 was co-cultured with suspension cells of B. scorzonerifolium and SSd was detected using high-performance liquid chromatography (HPLC). Transcriptome sequencing (RNA-Seq) of CHS3 before and after co-culture was performed using an Illumina HiSeq 2500 platform. The results indicated that the content of SSd synthesised by CHS3 increased after co-culture with suspension cells of B. scorzonerifolium. Transcriptome analysis of CHS3 with differentially expressed genes (DEGs) showed that 1202 and 1049 genes were upregulated and downregulated, respectively, after co-culture. Thirty genes associated with SSd synthesis and 11 genes related to terpene backbone biosynthesis were annotated to the Kyoto Encyclopaedia of Genes and Genomes (KEGG). Combined with transcriptome data, it was speculated that the mevalonate (MVA) pathway is a possible pathway for SSd synthesis in CHS3, and the expression of key enzyme genes (HMGR, HMGCS, GGPS1, MVK, FDFT1, FNTB) was validated by qRT-PCR. In conclusion, the endophytic fungus CHS3 can form an interactive relationship with its host, thereby promoting SSd biosynthesis and accumulation by upregulating the expression of key enzyme genes in the biosynthesis pathway.
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  • 文章类型: Journal Article
    外周血单核细胞(PBMC),自主采购,在采购时提供了许多优势:更容易的采购过程,不需要体外扩增,干预措施的减少和总体可接受性的增加使PBMC成为细胞疗法治疗的有吸引力的候选者.然而,PBMC治疗疾病的确切机制仍然知之甚少。免疫失衡是许多疾病的病理基础,巨噬细胞在这个过程中起着至关重要的作用。然而,关于PBMC在调节巨噬细胞中的作用和机制的研究仍然很少。本研究采用PBMC和RAW264.7巨噬细胞的体外共培养模型来探讨PBMC在调节巨噬细胞中的作用和机制。结果表明,共培养导致RAW264.7或培养上清液中炎性细胞因子的表达降低和抗炎细胞因子的表达增加。此外,促炎,组织基质降解M1巨噬细胞减少,而抗炎,矩阵合成,再生M2巨噬细胞在RAW264.7和PBMC内的单核细胞中均增加。此外,共培养的巨噬细胞表现出显著降低的p-STAT1/STAT1比值,而p-STAT6/STAT6比值显著增加。这表明PBMC可以通过阻断STAT1信号传导级联来抑制M1巨噬细胞极化,并且可以通过激活STAT6信号传导级联来促进M2巨噬细胞极化。总的来说,本研究揭示了PBMC在调节巨噬细胞中的作用和机制。此外,发现在巨噬细胞存在下,共培养的PBMC内的单核细胞分化成M2巨噬细胞。这一发现为使用PBMC治疗炎症性疾病提供了实验证据。尤其是消耗巨噬细胞的炎性疾病,如骨关节炎。
    Peripheral blood mononuclear cells (PBMC), sourced autologously, offer numerous advantages when procured: easier acquisition process, no in vitro amplification needed, decreased intervention and overall increased acceptability make PBMC an attractive candidate for cell therapy treatment. However, the exact mechanism by which PBMC treat diseases remains poorly understood. Immune imbalance is the pathological basis of many diseases, with macrophages playing a crucial role in this process. However, research on the role and mechanisms of PBMC in regulating macrophages remains scarce. This study employed an in vitro co-culture model of PBMC and RAW264.7 macrophages to explore the role and mechanisms of PBMC in regulating macrophages. The results showed that the co-culturing led to decreased expression of inflammatory cytokines and increased expression of anti-inflammatory cytokines in RAW264.7 or in the culture supernatant. Additionally, the pro-inflammatory, tissue matrix-degrading M1 macrophages decreased, while the anti-inflammatory, matrix-synthesizing, regenerative M2 macrophages increased in both RAW264.7 and monocytes within PBMC. Moreover, co-cultured macrophages exhibited a significantly decreased p-STAT1/STAT1 ratio, while the p-STAT6/STAT6 ratio significantly increased. This suggests that PBMC may inhibit M1 macrophage polarization by blocking STAT1 signaling cascades and may promote M2 macrophage polarization through the activation of STAT6 signaling cascades. Overall, this study sheds light on the role and mechanism of PBMC in regulating macrophages. Moreover, it was found that monocytes within co-cultured PBMC differentiated into M2 macrophages in the presence of macrophages. This finding provides experimental evidence for the use of PBMC in treating inflammatory diseases, especially macrophage-depleting inflammatory diseases such as osteoarthritis.
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