Protein Aggregation

蛋白质聚集
  • 文章类型: Journal Article
    蛋白乳液凝胶,作为食品工业中潜在的新型应用成分,它们的形成非常不稳定。然而,酸性物质(磷酸,乳酸,乙酸,苹果酸,谷氨酸,酒石酸和柠檬酸)可能有助于稳定形成乳清蛋白分离物(WPI)乳液及其凝胶。因此,在这项工作中,七种酸处理的WPI乳液的物理稳定性,和微观结构,流变性能,对其乳液凝胶的水分分布进行了表征和比较。最初,绝对zeta电位,界面蛋白吸附,酸诱导的WPI乳液的乳化特性高于酸未处理的WPI乳液。此外,酸诱导的WPI乳液是热诱导的(95℃,30分钟),通过二硫键作为主要力量(未经酸处理的WPI乳液无法形成凝胶)形成其乳液凝胶网络。高分辨率显微镜观察表明,乳液凝胶网络中的酸诱导WPI显示出聚集体的形态。动态振荡流变学结果表明,酸诱导乳液凝胶表现出高弹性行为,其粘弹性与蛋白质凝胶网络和聚集体的产生有关。此外,PCA和热图结果进一步表明,苹果酸诱导的WPI乳液凝胶具有最佳的保水性和凝胶特性。因此,这项研究可以为食品工业开辟新的质地和健康的乳化凝胶作为脂肪替代和生物活性物质的负载系统提供有效的途径。
    Protein emulsion gels, as potential novel application ingredients in the food industry, are very unstable in their formation. However, the incorporation of sour substances (phosphoric acid, lactic acid, acetic acid, malic acid, glutamic acid, tartaric acid and citric acid) would potentially contribute to the stable formation of whey protein isolate (WPI) emulsion as well as its gel. Thus, in this work, physical stability of seven acid-treated WPI emulsions, and microstructures, rheological properties, water distribution of its emulsion gels were characterized and compared. Initially, the absolute zeta-potential, interfacial protein adsorption, and emulsifying characteristics of acid-induced WPI emulsions were higher in contrast to acid-untreated WPI emulsions. Moreover, acid-induced WPI emulsions were thermally induced (95 ℃, 30 min) to form its emulsion gel networks via disulfide bonds as the main force (acid-untreated WPI emulsions were unable to form gels). High-resolution microscopic observation revealed that acid-induced WPI in emulsion gel network showed the morphology of aggregates. Dynamic oscillatory rheology results indicated that acid-induced emulsion gel exhibited highly elastic behavior and its viscoelasticity was associated with the generation of protein gel networks and aggregates. In addition, PCA and heatmap results further illustrated that malic acid-induced WPI emulsion gels had the best water holding capacity and gel characteristics. Therefore, this study could provide an effective way for the foodstuffs industry to open up new texture and healthy emulsion gels as fat replaces and loading systems of bioactive substances.
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  • 文章类型: Journal Article
    肌萎缩侧索硬化(ALS)是一种复杂的神经退行性疾病,其特征是进行性轴突病,共同导致运动神经元的死亡,破坏神经信号和运动控制.在这次审查中,我们强调了轴突病在ALS进展中的作用,由多种因素的相互作用驱动,包括有缺陷的贩运机械,蛋白质聚集,和线粒体功能障碍。细胞内运输功能失调,由微管中断引起的,分子马达,和适配器,已被确定为疾病进展的关键因素。涉及TDP-43,FUS的异常蛋白质聚集,SOD1和二肽重复蛋白进一步放大神经元毒性。线粒体缺陷导致ATP耗竭,氧化应激,和Ca2+失衡,它们被认为是神经肌肉接头丢失和轴突病变的关键因素。通过包括神经营养治疗在内的干预措施减轻这些缺陷具有治疗潜力。合作研究工作旨在解开ALS的复杂性,为针对不同病理机制的整体干预开辟了途径。
    Amyotrophic Lateral Sclerosis (ALS) is a complex neurodegenerative disorder characterized by progressive axonopathy, jointly leading to the dying back of the motor neuron, disrupting both nerve signaling and motor control. In this review, we highlight the roles of axonopathy in ALS progression, driven by the interplay of multiple factors including defective trafficking machinery, protein aggregation, and mitochondrial dysfunction. Dysfunctional intracellular transport, caused by disruptions in microtubules, molecular motors, and adaptors, has been identified as a key contributor to disease progression. Aberrant protein aggregation involving TDP-43, FUS, SOD1, and dipeptide repeat proteins further amplifies neuronal toxicity. Mitochondrial defects lead to ATP depletion, oxidative stress, and Ca2+ imbalance, which are regarded as key factors underlying the loss of neuromuscular junctions and axonopathy. Mitigating these defects through interventions including neurotrophic treatments offers therapeutic potential. Collaborative research efforts aim to unravel ALS complexities, opening avenues for holistic interventions that target diverse pathological mechanisms.
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  • 文章类型: Journal Article
    先天性白内障,儿童失明的普遍原因,与蛋白质聚集有关。γD-晶状体蛋白,对于维持镜头透明度至关重要,作为单体存在并表现出优异的结构稳定性。在我们的队列中,我们确定了一个无义突变(c.451_452insgact,p.Y151X)在CRYGD基因中。探讨截短突变对γD-晶状体蛋白结构的影响,我们检查了Y151X和T160RfsX8突变,在这项研究中,两者都位于细胞和蛋白质水平的希腊关键基序4中。当在HLEB3和HEK293T细胞中过表达时,两种截短突变均诱导蛋白质错误折叠并导致不溶性聚集体的形成。此外,热,紫外线照射,和氧化应激增加了细胞中突变体聚集体的比例。我们接下来纯化γD-晶状体蛋白以估计其结构变化。截断突变导致构象破坏和伴随的蛋白质溶解度降低。分子动力学模拟进一步证明,希腊关键基序4中保守结构域的部分缺失显着损害了蛋白质结构的整体稳定性。最后,α-晶状体蛋白的共表达促进了截短突变体的正确折叠并减轻了蛋白质聚集。总之,γD-晶状体蛋白中希腊关键基序4的结构完整性对于整体结构稳定性至关重要。
    Congenital cataracts, a prevalent cause of blindness in children, are associated with protein aggregation. γD-crystallin, essential for sustaining lens transparency, exists as a monomer and exhibits excellent structural stability. In our cohort, we identified a nonsense mutation (c.451_452insGACT, p.Y151X) in the CRYGD gene. To explore the effect of truncation mutations on the structure of γD-crystallin, we examined the Y151X and T160RfsX8 mutations, both located in the Greek key motif 4 at the cellular and protein level in this study. Both truncation mutations induced protein misfolding and resulted in the formation of insoluble aggregates when overexpressed in HLE B3 and HEK 293T cells. Moreover, heat, UV irradiation, and oxidative stress increased the proportion of aggregates of mutants in the cells. We next purified γD-crystallin to estimate its structural changes. Truncation mutations led to conformational disruption and a concomitant decrease in protein solubility. Molecular dynamics simulations further demonstrated that partial deletion of the conserved domain within the Greek key motif 4 markedly compromised the overall stability of the protein structure. Finally, co-expression of α-crystallins facilitated the proper folding of truncated mutants and mitigated protein aggregation. In summary, the structural integrity of the Greek key motif 4 in γD-crystallin is crucial for overall structural stability.
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  • 文章类型: Journal Article
    背景:蛋白质错误折叠和聚集可导致各种疾病。最近的研究揭示了乳腺癌病理中的聚集蛋白,这表明设计化学传感器来可视化乳腺癌中的蛋白质聚集体是至关重要的,尤其是在临床患者来源的样本中。然而,大多数报道的传感器被限制在培养的细胞系中。
    结果:在这项工作中,我们提出了两种基于异佛尔酮的结晶诱导发射荧光团的发展,用于检测从患病患者活检的乳腺癌细胞系和组织中的蛋白质组聚集,指定为A1和A2。这些探针表现出粘度敏感性,并在结晶状态下强烈恢复了荧光。此外,A1和A2对各种聚集蛋白表现出选择性结合能力和强荧光。利用这些探测器,我们检测到应激性乳腺癌细胞中的蛋白质聚集,人乳腺癌和临床患者来源样品的异种移植小鼠模型。值得注意的是,两种探针的荧光强度在肿瘤组织中亮起。
    结论:合成的基于异佛尔酮的结晶诱导发射荧光团,A1和A2能够灵敏地检测乳腺癌细胞和组织中的蛋白质聚集。在未来,聚集蛋白有望成为乳腺癌早期诊断和临床疾病监测的指标。
    BACKGROUND: Protein misfolding and aggregation can lead to various diseases. Recent studies have shed light on the aggregated protein in breast cancer pathology, which suggests that it is crucial to design chemical sensors that visualize protein aggregates in breast cancer, especially in clinical patient-derived samples. However, most reported sensors are constrained in cultured cell lines.
    RESULTS: In this work, we present the development of two isophorone-based crystallization-induced-emission fluorophores for detecting proteome aggregation in breast cancer cell line and tissues biopsied from diseased patients, designated as A1 and A2. These probes exhibited viscosity sensitivity and recovered their fluorescence strongly at crystalline state. Moreover, A1 and A2 exhibit selective binding capacity and strong fluorescence for various aggregated proteins. Utilizing these probes, we detect protein aggregation in stressed breast cancer cells, xenograft mouse model of human breast cancer and clinical patient-derived samples. Notably, the fluorescence intensity of both probes light up in tumor tissues.
    CONCLUSIONS: The synthesized isophorone-based crystallization-induced-emission fluorophores, A1 and A2, enable sensitive detection of protein aggregation in breast cancer cells and tissues. In the future, aggregated proteins are expected to become indicators for early diagnosis and clinical disease monitoring of breast cancer.
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  • 文章类型: Journal Article
    本研究的目的是根据蛋白质聚集和构象研究高温处理引起的肌原纤维蛋白(MP)凝胶恶化的机理。结果表明:随着温度的升高,MP的凝胶强度和保水性呈先升高后降低的趋势,在80℃时达到最大值(P<0.05)。微观结构分析表明,适当的温度(80°C)有助于形成更均匀的,密度更大,与其他处理温度相比,三维网格结构更光滑,而过高的温度(95°C)导致MP的异质和大的蛋白质聚集体的形成,降低凝胶网络的连续性。这通过MP凝胶的流变性能得到证实。在过高的温度下,MP的粒径(D4,3和D3,2)随着较大的簇而明显增加,MP的表面疏水性降低(P<0.05),与可溶性或不溶性蛋白质聚集体的形成有关。三级结构和二级结构结果表明,在较高温度处理下,蛋白质有更多的拉伸趋势,这导致共价相互作用和非共价相互作用的减少,助长议员的过度聚集。因此,我们目前的研究表明,在高温下处理的MP凝胶的降解可以通过MP的蛋白质聚集和构象变化来解释。
    The purpose of the present study was to investigate the mechanism of gel deterioration of myofibrillar proteins (MP) gels induced by high-temperature treatments based on the protein aggregation and conformation. The results showed that the gel strength and water holding capacity of MP obviously increased and then decreased as the temperature increased, reaching the maximum value at 80 °C (P < 0.05). The microstructure analysis revealed that appropriate temperature (80 °C) contributed to the formation of a more homogeneous, denser, and smoother three-dimensional mesh structure when compared other treatment temperatures, whereas excessive temperature (95 °C) resulted in the formation of heterogeneous and large protein aggregates of MP, decreasing the continuity of gel networks. This was verified by the rheological properties of MP gels. The particle size (D4,3 and D3,2) of MP obviously increased with larger clusters at excessive temperature, and the surface hydrophobicity of MP decreased (P < 0.05), which has been linked to the formation of soluble or insoluble protein aggregates. Tertiary structure and secondary structure results revealed that the proteins had a tendency to be more stretched under higher temperature treatments, which resulted in a decrease in covalent interactions and non-covalent interactions, fostering the over-aggregation of MP. Therefore, our present study indicated that the degradation of MP gels treated at high temperatures was explained by protein aggregation and conformational changes in MP.
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  • 文章类型: Journal Article
    帕金森病(PD)是世界上第二大常见的年龄相关性神经退行性疾病,突触核蛋白与PD的发生发展密切相关。突触核蛋白被认为是PD的治疗靶标。最近的研究发现,PD患者脑中α-突触核蛋白(α-Syn)的异常聚集会导致线粒体功能障碍和神经炎症。神经科学领域的研究已经证实β-突触核蛋白(β-Syn)在帕金森病中也起作用。然而,关于β-Syn和α-Syn在PD中的作用机制和相互作用的研究很少。因此,本研究的目的是阐明α-Syn,β-Syn,并探讨β-Syn和α-Syn在PD中的作用和相互作用。
    Parkinson\'s disease (PD) is the second most common age-related neurodegenerative disease in the world, and synuclein is closely related to the onset and progression of PD. Synuclein is considered a therapeutic target for PD. Recent studies have found that abnormal aggregation of α-synuclein (α-Syn) in the brains of PD patients leads to mitochondrial dysfunction and neuroinflammation. Research in the field of neuroscience has confirmed that β-synuclein (β-Syn) also plays a role in Parkinson\'s disease. However, there has been little research on the role mechanisms and interactions between β-Syn and α-Syn in PD. Therefore, the purpose of this study is to clarify the relationship between α-Syn, β-Syn, and PD and to explore the roles and interactions of β-Syn and α-Syn in PD.
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  • 文章类型: Journal Article
    淀粉样蛋白斑块是涉及阿尔茨海默病的主要病理标志,由淀粉样蛋白-β肽(Aβ)的沉积物组成。Aβ的聚集过程非常复杂,这导致具有不同结构的多晶型聚集体。除了异常聚集,Aβ低聚物可以经历液-液相分离并形成动态冷凝物。已经假设这些淀粉样蛋白液滴影响并调节淀粉样蛋白原纤维的形成。在这次审查中,我们简要介绍了应激颗粒与神经退行性疾病相关的淀粉样蛋白聚集之间的关系。然后,我们强调了液-液相分离在Aβ聚集中的调节作用,并讨论了Aβ相变与聚集之间的潜在关系。此外,我们总结了目前Aβ寡聚体和淀粉样纤维的结构,已使用核磁共振和低温电子显微镜确定。Aβ聚集体的结构变化为不同程度的毒性提供了解释,阐明了聚集机制,并可能为临床诊断和治疗基于结构的药物设计铺平道路。
    Amyloid plaques are a major pathological hallmark involved in Alzheimer\'s disease and consist of deposits of the amyloid-β peptide (Aβ). The aggregation process of Aβ is highly complex, which leads to polymorphous aggregates with different structures. In addition to aberrant aggregation, Aβ oligomers can undergo liquid-liquid phase separation (LLPS) and form dynamic condensates. It has been hypothesized that these amyloid liquid droplets affect and modulate amyloid fibril formation. In this review, we briefly introduce the relationship between stress granules and amyloid protein aggregation that is associated with neurodegenerative diseases. Then we highlight the regulatory role of LLPS in Aβ aggregation and discuss the potential relationship between Aβ phase transition and aggregation. Furthermore, we summarize the current structures of Aβ oligomers and amyloid fibrils, which have been determined using nuclear magnetic resonance (NMR) and cryo-electron microscopy (cryo-EM). The structural variations of Aβ aggregates provide an explanation for the different levels of toxicity, shed light on the aggregation mechanism and may pave the way towards structure-based drug design for both clinical diagnosis and treatment.
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  • 文章类型: Journal Article
    蛋白质聚集引起的蛋白质抑制的破坏会导致细胞的细胞毒性甚至细胞死亡,这与多种神经退行性疾病有关。聚集蛋白的消除是由选择性巨自噬受体介导的,这被称为聚合。然而,聚集性受体在识别底物方面的同一性和冗余性在很大程度上仍未被探索。这里,我们发现CCDC50是一种在脑中高表达的自噬受体,被募集到蛋白毒性应激诱导的多泛素化蛋白聚集体和异位表达的聚集倾向蛋白。CCDC50通过自噬识别并进一步清除这些细胞毒性聚集体。CCDC50的异位表达增加了对应激诱导的蛋白毒性的耐受性,从而改善了神经元细胞的细胞存活,而CCDC50缺乏导致1岁小鼠脑中脂质沉积和多泛素化蛋白缀合物的积累。我们的研究说明了聚集性受体CCDC50如何对抗蛋白毒性应激,以获得神经元细胞存活的益处,因此表明在神经毒性蛋白病中具有保护作用。
    Protein aggregation caused by the disruption of proteostasis will lead to cellular cytotoxicity and even cell death, which is implicated in multiple neurodegenerative diseases. The elimination of aggregated proteins is mediated by selective macroautophagy receptors, which is termed aggrephagy. However, the identity and redundancy of aggrephagy receptors in recognizing substrates remain largely unexplored. Here, we find that CCDC50, a highly expressed autophagy receptor in brain, is recruited to proteotoxic stresses-induced polyubiquitinated protein aggregates and ectopically expressed aggregation-prone proteins. CCDC50 recognizes and further clears these cytotoxic aggregates through autophagy. The ectopic expression of CCDC50 increases the tolerance to stress-induced proteotoxicity and hence improved cell survival in neuron cells, whereas CCDC50 deficiency caused accumulation of lipid deposits and polyubiquitinated protein conjugates in the brain of one-year-old mice. Our study illustrates how aggrephagy receptor CCDC50 combats proteotoxic stress for the benefit of neuronal cell survival, thus suggesting a protective role in neurotoxic proteinopathy.Abbreviations: AD: Alzheimer disease; ALS: amyotrophic lateral sclerosis; ATG5: autophagy related 5; BODIPY: boron-dipyrromethene; CASP3: caspase 3; CCDC50: coiled-coil domain containing 50; CCT2: chaperonin containing TCP1 subunit 2; CHX: cycloheximide; CQ: chloroquine; CRISPR: clustered regulatory interspaced short palindromic repeat; Cas9: CRISPR-associated system 9; DAPI: 4\',6-diamidino-2-phenylindole; FK2: Anti-ubiquitinylated proteins antibody, clone FK2; FUS: FUS RNA binding protein; GFP: green fluorescent protein; HD: Huntington disease; HTT: huntingtin; KEGG: Kyoto Encyclopedia of Genes and Genomes; LDS: LIR-docking site; LIR: LC3-interacting region; MAP1LC3/LC3: microtubule associated protein 1 light chain 3; MAPT/tau: microtubule associated protein tau; MIU: motif interacting with ubiquitin; NBR1: NBR1, autophagy cargo receptor; OPTN: optineurin; PD: Parkinson disease; PI: propidium iodide; ROS: reactive oxygen species; SOD1: superoxide dismutase 1; SQSTM1/p62: sequestosome 1; TAX1BP1: Tax1 binding protein 1; Ub: ubiquitin; UDS: UIM-docking site; UIM: ubiquitin interacting motif; UPS: ubiquitin-proteasome system.
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  • 文章类型: Journal Article
    由于体感神经系统损伤或疾病,神经性疼痛通常与化疗有关,称为化疗引起的周围神经病变(CIPN)。然而,由于检测手段有限,CIPN诱导的神经元细胞蛋白质组聚集的机制仍然难以捉摸.在这里,我们提供了用于荧光成像(AggStain)和蛋白质组学分析(AggLink)的系列传感器,以可视化和捕获CIPN神经元细胞模型中聚集的蛋白质组。环境敏感的AggStain成像传感器选择性结合并检测具有12.3倍荧光增强的蛋白质聚集。Further,共价AggLink蛋白质组传感器通过LC-MS/MS分析捕获细胞聚集的蛋白质并描述其组成。该集成传感器平台揭示了CIPN细胞模型中蛋白质组聚集的存在,并强调了其在各种细胞应激条件下评估蛋白质组稳定性的更广泛应用的潜力。
    As a consequence of somatosensory nervous system injury or disease, neuropathic pain is commonly associated with chemotherapies, known as chemotherapy-induced peripheral neuropathy (CIPN). However, the mechanisms underlying CIPN-induced proteome aggregation in neuronal cells remain elusive due to limited detection tools. Herein, we present series sensors for fluorescence imaging (AggStain) and proteomics analysis (AggLink) to visualize and capture aggregated proteome in CIPN neuronal cell model. The environment-sensitive AggStain imaging sensor selectively binds and detects protein aggregation with 12.3 fold fluorescence enhancement. Further, the covalent AggLink proteomic sensor captures cellular aggregated proteins and profiles their composition via LC-MS/MS analysis. This integrative sensor platform reveals the presence of proteome aggregation in CIPN cell model and highlights its potential for broader applications in assessing proteome stability under various cellular stress conditions.
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  • 文章类型: Journal Article
    利用农业工业废物丰富食品蛋白质资源并探索其更广泛的应用对于解决粮食危机和实现可持续发展目标至关重要。在这项研究中,使用木瓜蛋白酶和胰蛋白酶水解来自cil的丝胶蛋白,制备丝胶蛋白肽(SRP),并用作高蛋白营养棒(HPNBs)的抗硬化成分。通过研究糖基化终产物和蛋白质氧化产物(羰基和游离巯基)的含量,阐明了SRP的抗硬化作用机理。以及添加SRP前后HPNBs在储存过程中的分子量变化。我们的结果证实了用SRP强化HPNB,这有利于促进和扩大丝胶在食品工业中的应用,对合理利用蛋白质资源和丰富食品蛋白质源具有积极意义。
    The utilization of agroindustrial wastes to enrich food protein resources and the exploration of their broader applications are crucial for addressing the food crisis and achieving sustainable development goals. In this study, reeling wastewater-derived sericin was hydrolyzed using papain and trypsin to prepare sericin peptide (SRP) and was used as an antihardening ingredient of high-protein nutrition bars (HPNBs). The mechanism of the antihardening effect of SRP was elucidated by investigating the content of advanced glycation end products and protein oxidation products (carbonyl and free sulfhydryl), and the molecular weight change of HPNBs during storage before and after the addition of SRP. Our results confirmed the fortification of HPNBs with SRP, which is beneficial for the promotion and expansion of sericin applications in the food industry, with positive implications for the rational utilization of protein resources and the enrichment of food protein sources.
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