Nocardia Infections

诺卡氏菌感染
  • 文章类型: Journal Article
    从重庆一名患者的痰标本中分离出了二革兰氏染色阳性和杆状放线菌(CDC186T和CDC192菌株),中国公关,并进行了调查以确定它们的分类地位。基于16SrRNA基因的系统发育分析结果表明,CDC186T和CDC192代表诺卡氏菌属的成员,与北京诺卡氏菌DSM44636T的序列相似性最高,在99.71和99.78%,分别。CDC186T和CDC192的DNAG+C含量均为69.1%。基因组多样性分析显示,两个新菌株和密切相关物种之间的平均核苷酸同一性和计算机DNA-DNA杂交值显着低于95-96和70%的阈值,分别,但是这两个新菌株之间的值是99.96%和99.90%,分别。基于dapb1基因和单拷贝核心基因的系统发育关系进一步表明,这两个新菌株聚集在邻近北美洲DSM44636T的单独分支中。生长发生在20-42°C的范围内,pH6.0-9.0,NaCl浓度为0.5-4.5%(w/v)。CDC186T和CDC192的主要脂肪酸为C16:0和C18:010-甲基[结核硬脂酸(TBSA)]。主要的呼吸甲基萘醌是MK-9。极性脂质分布含有二磷脂酰甘油,磷脂酰乙醇胺,磷脂酰肌醇甘露糖苷,一种身份不明的糖脂,一种身份不明的磷脂和一种身份不明的磷酸糖脂。所研究菌株的所有基因组均注释有与结核分枝杆菌同源的毒力因子(VF)相关基因,药敏结果显示CDC186T和CDC192对阿莫西林克拉维酸和替加环素耐药。根据化学分类学特征和系统发育分析的结果,菌株CDC186T和CDC192代表诺卡氏菌属中的一个新物种,对于这个名字,诺卡氏菌植入sp。11月。是提议的。菌株类型为CDC186T(=GDMCC4.206T=JCM34959T)。
    TwoGram-stain-positive and rod-shaped actinomycetes (strains CDC186T and CDC192) were isolated from sputum samples of a patient in Chongqing, PR China, and were investigated to determine their taxonomic status. The results of phylogenetic analysis based on the 16S rRNA gene indicated that CDC186T and CDC192 represented members of the genus Nocardia, and the sequence similarity with Nocardia beijingensis DSM 44636T was the highest, at 99.71 and 99.78 %, respectively. The DNA G+C content of both CDC186T and CDC192 was 69.1 %. Genomic diversity analysis revealed that the average nucleotide identity and in silico DNA‒DNA hybridisation values between the two novel strains and closely related species were significantly below the thresholds of 95-96 and 70 %, respectively, but these values between the two novel strains were 99.96 and 99.90 %, respectively. The phylogenetic relationship based on the dapb1 gene and the single-copy core genes further indicated that the two novel strains were clustered in separate branch adjacent to N. beijingensis DSM 44636T. Growth occurred within the ranges of 20-42 °C, pH 6.0-9.0 and NaCl concentrations of 0.5-4.5 % (w/v). The major fatty acids of CDC186T and CDC192 were C16 : 0 and C18 : 0 10-methyl [tuberculostearic acid (TBSA)]. The predominant respiratory menaquinone was MK-9. The polar lipid profile contained diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol mannoside, one unidentified glycolipid, one unidentified phospholipid and one unidentified phosphoglycolipid. All the genomes of the studied strains were annotated with virulence factor (VF)-associated genes homologous to those of Mycobacterium tuberculosis, and the results of susceptibility testing indicated that CDC186T and CDC192 were resistant to amoxicillin-clavulanic acid and tigecycline. On the basis of chemotaxonomic characteristics and the results of phylogenetic analyses, strains CDC186T and CDC192 represent a novel species within the genus Nocardia, for which the name Nocardia implantans sp. nov. is proposed. The type strain is CDC186T (=GDMCC 4.206T= JCM 34959T).
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  • 文章类型: Case Reports
    诺卡氏菌病表现出时间分类,包括急性,亚急性,和慢性阶段以及不同的典型定位,如肺部,皮肤,和传播形式。播散性诺卡尼病,通常由诺卡氏菌小行星引起,巴西奈斯,和N.Farcinica,继续导致大量的发病率和死亡率。在这里,我们报道了一例微小病变患者的耳道诺卡氏菌引起的危及生命的播散性诺卡氏菌病.这项研究强调了在临床环境中诊断和治疗未知感染的困难,并强调了实验室在解决由罕见病原体引起的传染病方面发挥的重要作用。
    Nocardiosis demonstrates a temporal categorization that includes acute, subacute, and chronic stages alongside distinct typical localizations such as pulmonary, cutaneous, and disseminated forms. Disseminated nocardiosis, commonly caused by Nocardia asteroides, N. brasiliensis, and N. farcinica, continues to result in substantial morbidity and mortality. Herein, we report a life-threatening disseminated nocardiosis caused by Nocardia otitidiscaviarum in a patient with minimal change disease. This study emphasizes the difficulty in the diagnosis and treatment of unknown infections in clinical settings and highlights the important role played by laboratories in solving infectious diseases caused by rare pathogens.
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  • 文章类型: Case Reports
    背景:慢性炎症性脱髓鞘性多发性神经病(CIDP)是一种免疫介导的运动感觉性周围神经病变,在临床实践中是罕见的。该治疗方法旨在抑制潜在的免疫病理学。诺卡病是一种罕见的,破坏性,机会性疾病。我们报告一例CIDP合并肺诺卡心症治疗失败,第一次,我们将这两种疾病联系在一起。
    方法:一名65岁的男子出现了对称的肢体无力。四个月后,患者被诊断为CI-DP,并开始接受糖皮质激素(GC)治疗.该疾病进展缓慢,并用霉酚酸酯(MMF)联合治疗。他没有按照医生的要求进行每月随访,未严格执行磺胺甲恶唑/甲氧苄啶的预防用药。联合治疗两个月后,病人出现发热,咳嗽和痰,以及疲劳和食欲不振。根据影像学和病因学结果,他被诊断为肺诺卡心症。
    方法:慢性炎症性脱髓鞘性多发性神经病,肺诺卡心症.
    方法:抗生素治疗后,患者肺部感染暂时好转。然而,患者CIDP病情进展,肢体无力恶化,发生呼吸肌受累,和静脉注射免疫球蛋白(IVIG)。然而,病情没有明显改善,病人死了.
    结果:在本报告中,我们介绍一例CIDP和肺诺卡心症患者。值得注意的是,为了避免CIDP的进展和复发,在治疗过程中,我们没有停止使用相关的治疗药物,患者多次拒绝使用IVIG.尽管如此,当肺部炎症好转时,患者病情恶化,导致持续性呼吸衰竭并最终死亡。治疗矛盾,药物问题,这种情况下反映的患者依从性问题值得考虑。
    结论:对于接受免疫抑制治疗的CIDP患者,应注意诺卡氏菌感染的发生和严重程度。因此,早期发现和治疗是必要的。我们需要注意患者预防性使用抗生素的依从性,加强后续行动,并敦促他们按时返回约会。
    BACKGROUND: Chronic inflammatory demyelinating polyneuropathy (CIDP) is an immune-mediated motor sensory peripheral neuropathy that is rare in clinical practice. This treatment method aims to suppress potential immunopathology. Nocardiosis is a rare, destructive, opportunistic disease. We report a case of failed treatment of CIDP combined with pulmonary nocardiosis, and for the first time, we link these 2 diseases together.
    METHODS: A 65-year-old man developed symmetrical limb weakness. Four months later, he was diagnosed with CIDP and started receiving glucocorticoid (GC) treatment. The disease progressed slowly and was treated with mycophenolate mofetil (MMF) in combination. He did not follow the doctor requirements for monthly follow-up visits, and the preventive medication for sulfamethoxazole/trimethoprim was not strictly implemented. Two months after the combination therapy, the patient developed fever, coughing and sputum production, as well as fatigue and poor appetite. Based on imaging and etiological results, he was diagnosed with pulmonary nocardiosis.
    METHODS: Chronic inflammatory demyelinating polyneuropathy, pulmonary nocardiosis.
    METHODS: After treatment with antibiotics, the patient lung infection temporarily improved. However, the patient CIDP condition progressed, limb weakness worsened, respiratory muscle involvement occurred, and intravenous immunoglobulin (IVIG) was administered. However, there was no significant improvement in the condition, and the patient died.
    RESULTS: In this report, we present a case of a patient with CIDP and pulmonary nocardiosis. It is worth noting that in order to avoid the progression and recurrence of CIDP, we did not stop using related therapeutic drugs during the treatment process, the patient had repeatedly refused to use IVIG. Despite this, the patient condition worsened when lung inflammation improved, leading to persistent respiratory failure and ultimately death. Treatment contradictions, medication issues, and patient compliance issues reflected in this case are worth considering.
    CONCLUSIONS: For patients with CIDP receiving immunosuppressive therapy, attention should be paid to the occurrence and severity of Nocardia infection. Therefore, early detection and treatment are necessary. We need to pay attention to the compliance of patients with prophylactic use of antibiotics, strengthen the follow-up, and urge them to return to their appointments on time.
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  • 文章类型: Letter
    暂无摘要。
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  • 文章类型: Journal Article
    补体系统在先天免疫防御中至关重要,补体1qb(C1qb)在识别免疫复合物和启动经典途径中起关键作用。在这项研究中,我们克隆了银鱼(Pampusargenteus)c1qb的全长cDNA,并证明了其在介导针对诺卡氏菌的防御反应中的作用(N。Seriolae)感染,这尤其在水产养殖业中造成了巨大的经济损失。我们的调查显示,N.seriolae感染导致鱼体组织损伤,如在组织切片中观察到的。随后对转录组中的差异基因(DEGs)的分析突出了与凋亡和炎症相关的基因。通过体外c1qb过表达和干扰的实验,我们证实c1qb可以抑制丝虫诱导的细胞凋亡和炎症反应。此外,c1qb的过表达阻碍了N.seriolae的入侵,纯化和复制的C1qb蛋白显示出抗菌特性。此外,我们的研究揭示了c1qb的过表达可能刺激膜攻击复合物(MAC)的表达,潜在增强调理作用和抗菌作用。总之,我们的研究结果为c1qb的免疫抗菌机制提供了有价值的见解,并有助于制定控制策略。
    The complement system is pivotal in innate immune defense, with Complement 1qb (C1qb) playing a key role in recognizing immune complexes and initiating the classical pathway. In this research, we cloned the full-length cDNA of silver pomfret (Pampus argenteus) c1qb and demonstrated its role in mediating defense responses against Nocardia seriolae (N. seriolae) infection, which notably causes significant economic losses in the aquaculture industry. Our investigation revealed that N. seriolae infection led to tissue damage in fish bodies, as observed in tissue sections. Subsequent analysis of differential genes (DEGs) in the transcriptome highlighted genes linked to apoptosis and inflammation. Through experiments involving overexpression and interference of c1qb in vitro, we confirmed that c1qb could suppress N. seriolae-induced apoptosis and inflammation. Moreover, overexpression of c1qb hindered N. seriolae invasion, and the purified and replicated C1qb protein displayed antimicrobial properties. Additionally, our study unveiled that overexpression of c1qb might stimulate the expression of membrane attack complexes (MAC), potentially enhancing opsonization and antibacterial effects. In conclusion, our findings offer valuable insights into the immune antibacterial mechanisms of c1qb and contribute to the development of strategies for controlling N. seriolae.
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  • 文章类型: Journal Article
    诺卡氏菌病原体引起慢性肉芽肿病,据报道,影响了40多种海洋和淡水养殖鱼类。因此,需要进行研究以解决和消除对水产养殖业的这一重大威胁。在这方面,需要建立可靠且可重复的感染模型,以更好地了解该病原体的生物学特性及其在感染过程中与宿主的相互作用,以及开发新的疫苗或其他有效的治疗方法。在这项研究中,我们使用一系列方法和分析检查了病原体的致病性和蛇头(Channaargus)少年对N.seriolae的免疫反应,包括病原体的分离和鉴定,组织病理学,Kaplan-Meier生存曲线分析,并确定中位致死剂量(LD50)和细胞因子表达。我们初步建立了N.seriolae-C.argus模型。根据我们的形态学和系统发育分析数据,分离的菌株被鉴定为N.seriolae并命名为NSE01。用N.seriolaeNSE01感染健康的幼年C.argus后18天,所有四个实验组(腹膜内注射1×105CFU/mL-1×108CFU/mL的细菌悬浮液)(n=120)的死亡率为100%。亚麻黄NSE01对幼鱼的LD50为1.13×106CFU/鱼。受感染的幼年阿耳根有明显的病理变化,包括内脏组织肿胀,出血,在多个组织中存在许多大小不同的结节。进一步的组织病理学检查显示典型的全身性肉芽肿形成。此外,感染N.SeriolaeNSE01后,重要细胞因子的基因表达,如Toll样受体基因TLR2、TLR13、白细胞介素-1受体基因IL1R1、IL1R2和干扰素调节因子IRF2在不同组织中显著上调,表明它们可能参与宿主的免疫反应和对N.seriolae的调节。总之,幼年的马尾藻可以作为马尾藻感染的合适模型。该动物模型的建立将有助于诺卡尼病发病机制的研究和疫苗的开发。
    Nocardia seriolae pathogen causes chronic granulomatous disease, reportedly affecting over 40 species of marine and freshwater cultured fish. Hence, research is required to address and eliminate this significant threat to the aquaculture industry. In this respect, a reliable and reproducible infection model needs to be established to better understand the biology of this pathogen and its interactions with the host during infection, as well as to develop new vaccines or other effective treatment methods. In this study, we examined the pathogenicity of the pathogen and the immune response of snakehead (Channa argus) juvenile to N. seriolae using a range of methods and analyses, including pathogen isolation and identification, histopathology, Kaplan-Meier survival curve analysis, and determination of the median lethal dose (LD50) and cytokine expression. We have preliminarily established a N. seriolae - C. argus model. According to our morphological and phylogenetic analysis data, the isolated strain was identified as N. seriolae and named NSE01. Eighteen days post-infection of healthy juvenile C. argus with N. seriolae NSE01, the mortality rate in all four experimental groups (intraperitoneally injected with 1 × 105 CFU/mL - 1 × 108 CFU/mL of bacterial suspension) (n = 120) was 100 %. The LD50 of N. seriolae NSE01 for juvenile C. argus was determined to be 1.13 × 106 CFU/fish. Infected juvenile C. argus had significant pathological changes, including visceral tissue swelling, hemorrhage, and the presence of numerous nodules of varying sizes in multiple tissues. Further histopathological examination revealed typical systemic granuloma formation. Additionally, following infection with N. seriolae NSE01, the gene expression of important cytokines, such as Toll-like receptor genes TLR2, TLR13, interleukin-1 receptor genes IL1R1, IL1R2, and interferon regulatory factor IRF2 were significantly upregulated in different tissues, indicating their potential involvement in the host immune response and regulation against N. seriolae. In conclusion, juvenile C. argus can serve as a suitable model for N. seriolae infection. The establishment of this animal model will facilitate the study of the pathogenesis of nocardiosis and the development of vaccines.
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  • 文章类型: Journal Article
    在这项研究中,我们介绍了大嘴鲈鱼(Micropterussalmoides)中穿孔素(MsPRF1)的首次克隆和鉴定。MsPRF1的全长cDNA跨越1572个碱基对,编码由523个氨基酸组成的58.88kDa蛋白质。值得注意的是,该蛋白质包含MACPF和C2结构域。为了评估MsPRF1在各种健康的大嘴鲈鱼组织中的表达水平,采用实时定量PCR,揭示了肝脏和肠道中最高的表达。大嘴鲈鱼被诺卡氏菌感染后,MsPRF1的mRNA水平通常在48小时内增加。值得注意的是,重组蛋白MsPRF1对革兰氏阴性和革兰氏阳性细菌均表现出抑制作用。此外,在腹膜内注射rMsPRF1后,大嘴鲈鱼在N.seriolae攻击中显示出更高的存活率,并观察到组织细菌负荷的减少。此外,rMsPRF1对大口鲈鱼MO/MΦ细胞的吞噬和杀菌活性有显著影响,同时上调促炎因子的表达。这些结果表明,MsPRF1在大口鲈鱼对抗马尾藻感染的免疫反应中具有潜在作用。
    In this study, we present the first cloning and identification of perforin (MsPRF1) in largemouth bass (Micropterus salmoides). The full-length cDNA of MsPRF1 spans 1572 base pairs, encoding a 58.88 kDa protein consisting of 523 amino acids. Notably, the protein contains MACPF and C2 structural domains. To evaluate the expression levels of MsPRF1 in various healthy largemouth bass tissues, real-time quantitative PCR was employed, revealing the highest expression in the liver and gut. After the largemouth bass were infected by Nocardia seriolae, the mRNA levels of MsPRF1 generally increased within 48 h. Remarkably, the recombinant protein MsPRF1 exhibits inhibitory effects against both Gram-negative and Gram-positive bacteria. Additionally, the largemouth bass showed a higher survival rate in the N. seriolae challenge following the intraperitoneal injection of rMsPRF1, with observed reductions in the tissue bacterial loads. Moreover, rMsPRF1 demonstrated a significant impact on the phagocytic and bactericidal activities of largemouth bass MO/MΦ cells, concurrently upregulating the expression of pro-inflammatory factors. These results demonstrate that MsPRF1 has a potential role in the immune response of largemouth bass against N. seriolae infection.
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  • 文章类型: Review
    背景:诺卡氏菌是引起人类感染的最常见诺卡氏菌之一。它是一种机会性病原体,经常感染免疫系统受损的人。它可以通过呼吸道或皮肤伤口侵入人体,引起局部感染,并通过血行播散影响其他器官。然而,法氏杆菌引起的菌血症并不常见。在这项研究中,我们报道了中国1例土豆素引起的菌血症。
    方法:北京协和医院收治一名80岁女性,因反复发热,右腹痛了一个半月,和右肾上腺的占领。使用血液培养和血浆宏基因组学下一代测序(mNGS)鉴定了N.Farcinica为致病病原体。临床考虑因素包括由诺卡氏菌感染引起的菌血症和肾上腺脓肿。因为病人对磺胺过敏,对亚胺培南/西司他丁和利奈唑胺进行经验性给药。不幸的是,患者最终在开始抗感染治疗后不到一个月死亡.
    结论:N.Farcinica菌血症很少见,其临床表现没有特异性。它的诊断取决于病因检查,这可以使用Sanger测序和mNGS等技术来证实。在这份报告中,我们回顾了过去十年报告的诺卡氏菌血流感染病例,希望能提高临床医师对诺卡氏菌血流感染的认识,并对其早期诊断和及时治疗有所帮助。
    BACKGROUND: Nocardia farcinica is one of the most common Nocardia species causing human infections. It is an opportunistic pathogen that often infects people with compromised immune systems. It could invade human body through respiratory tract or skin wounds, cause local infection, and affect other organs via hematogenous dissemination. However, N. farcinica-caused bacteremia is uncommon. In this study, we report a case of bacteremia caused by N. farcinica in China.
    METHODS: An 80-year-old woman was admitted to Peking Union Medical College Hospital with recurrent fever, right abdominal pain for one and a half month, and right adrenal gland occupation. N. farcinica was identified as the causative pathogen using blood culture and plasma metagenomics next-generation sequencing (mNGS). The clinical considerations included bacteremia and adrenal gland abscess caused by Nocardia infection. As the patient was allergic to sulfanilamide, imipenem/cilastatin and linezolid were empirically administered. Unfortunately, the patient eventually died less than a month after the initiation of anti-infection treatment.
    CONCLUSIONS: N. farcinica bacteremia is rare and its clinical manifestations are not specific. Its diagnosis depends on etiological examination, which can be confirmed using techniques such as Sanger sequencing and mNGS. In this report, we have reviewed cases of Nocardia bloodstream infection reported in the past decade, hoping to improve clinicians\' understanding of Nocardia bloodstream infection and help in its early diagnosis and timely treatment.
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  • 文章类型: Journal Article
    诺卡氏菌对各种鱼类产生不利影响,表现出显著的致病特征,严重阻碍了水产养殖的发展。鱼中的N.seriolae感染有很长的潜伏期,早期临床症状不明显。目前没有可行和生态友好的方法来对抗这种疾病的传播。据报道,N.seriolae主要针对感染鱼后组织中的巨噬细胞,并且可以大量增殖,导致鱼的死亡。干扰素-γ(IFN-γ)是调节巨噬细胞活化的关键分子,但对其在N.seriolae预防中的作用知之甚少。
    IFN-γ首先被定义为大嘴鲈鱼(Micropterussalmoides,MsIFN-γ),通过同源性分析,其具有高度保守的IFN-γ特征序列。重组蛋白(rMsIFN-γ)在大肠杆菌中获得(E。大肠杆菌)菌株BL21(DE3)。使用单核细胞/巨噬细胞在体外评估rMsIFN-γ的炎症反应诱导能力。同时,通过N.seriolae感染大口鲈鱼模型评估MsIFN-γ的体内保护作用。
    在由rMsIFN-γ激活的单核细胞/巨噬细胞的炎症反应中,各种细胞因子显著增加。有趣的是,白细胞介素1β(IL-1β)和肿瘤坏死因子α(TNF-a)增加了183和12倍,分别,rMsIFN-γ刺激后。与对照相比,rMsIFN-γ使存活率提高42.1%。肝脏中的细菌负荷,脾脏和头肾明显减少。rMsIFN-γ也显示出更好地诱导IL-1β表达增加,TNF-α,铁调素-1(Hep-1),主要组织相容性复合体I(MHCI),和头肾的MHCII,脾脏和肝脏。组织病理学检查表明,在感染期间,肉芽肿状态从早期坏死灶转变为纤维化。出乎意料的是,rMsIFN-γ组成功减缓了肉芽肿的发展。
    这项工作为进一步研究大口鲈鱼的IFN-γ铺平了道路,并确定了预防N.seriolae的潜在治疗靶标。
    Nocardia seriolae adversely impacts a diverse range of fish species, exhibiting significant pathogenic characteristics that substantially impede the progress of aquaculture. N. seriolae infects in fish has a long incubation period, and clinical symptoms are not obvious in the early stages. There is presently no viable and eco-friendly approach to combat the spread of the disease. According to reports, N. seriolae primarily targets macrophages in tissues after infecting fish and can proliferate massively, leading to the death of fish. Interferon-gamma (IFN-γ) is a crucial molecule that regulates macrophage activation, but little is known about its role in the N. seriolae prevention.
    IFN-γ was first defined as largemouth bass (Micropterus salmoides, MsIFN-γ), which has a highly conserved IFN-γ characteristic sequence through homology analysis. The recombinant proteins (rMsIFN-γ) were obtained in Escherichia coli (E. coli) strain BL21 (DE3). The inflammatory response-inducing ability of rMsIFN-γ was assessed in vitro using monocytes/macrophages. Meanwhile, the protective effect of MsIFN-γ in vivo was evaluated by N. seriolae infection largemouth bass model.
    In the inflammatory response of the monocytes/macrophages activated by rMsIFN-γ, various cytokines were significantly increased. Interestingly, interleukin 1β (IL-1β) and tumor necrosis factor alpha (TNF-a) increased by 183- and 12-fold, respectively, after rMsIFN-γ stimulation. rMsIFN-γ improved survival by 42.1% compared with the control. The bacterial load in the liver, spleen and head kidney significantly decreased. rMsIFN-γ was also shown to better induce increased expression of IL-1β, TNF-α, hepcidin-1(Hep-1), major histocompatibility complex I (MHCI), and MHC II in head kidney, spleen and liver. The histopathological examination demonstrated the transformation of granuloma status from an early necrotic foci to fibrosis in the infection period. Unexpectedly, the development of granulomas was successfully slowed in the rMsIFN-γ group.
    This work paves the way for further research into IFN-γ of largemouth bass and identifies a potential therapeutic target for the prevention of N. seriolae.
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