Nocardia Infections

诺卡氏菌感染
  • 文章类型: Case Reports
    背景:诺卡氏菌是一种普遍存在的土壤生物。作为一种机会性病原体,吸入和皮肤接种是最常见的感染途径。肺和皮肤是诺卡心病最常见的部位。睾丸是一个非常不寻常的位置,用于诺卡孔病。
    方法:我们报告一例因不明原因发热而入院的免疫功能低下的75岁男子。他在园艺后出现皮肤损伤,并首次被怀疑患有地中海斑点热,但他对强力霉素没有反应.然后,体格检查显示新的左阴囊肿胀,与附睾-睾丸炎的诊断相符.尽管经验性抗生素治疗,但患者的病情并未改善,坏死性阴囊脓肿需要手术治疗。从去除的睾丸培养物中产生了巴西诺卡氏菌。开始使用大剂量甲氧苄啶-磺胺甲恶唑和头孢曲松。在影像学研究中,在大脑和脊髓中发现了多个微脓肿。经过6周的双重抗生素治疗播散性诺卡尼病,观察到脑脓肿的轻微消退。患者经过6个月的抗生素疗程后出院,在撰写这些行时仍无复发。甲氧苄啶-磺胺甲恶唑单独使用后6个月。我们对以前报道的泌尿生殖系统和泌尿系统的诺卡尼病病例进行了文献综述;迄今为止,只有36例主要累及肾脏,前列腺和睾丸.
    结论:据我们所知,这是首例同时感染皮肤的巴西诺卡氏菌,睾丸,免疫功能低下患者的大脑和脊髓。关于罕见形式的诺卡尼病的知识仍然很少。此病例报告强调了诊断非典型诺卡尼病的困难以及在经验性抗生素失败的情况下及时进行细菌学采样的重要性。
    BACKGROUND: Nocardia is an ubiquitous soil organism. As an opportunistic pathogen, inhalation and skin inoculation are the most common routes of infection. Lungs and skin are the most frequent sites of nocardiosis. Testis is a highly unusual location for nocardiosis.
    METHODS: We report the case of an immunocompromised 75-year-old-man admitted for fever of unknown origin. He presented with skin lesions after gardening and was first suspected of Mediterranean spotted fever, but he did not respond to doxycycline. Then, physical examination revealed new left scrotal swelling that was compatible with a diagnosis of epididymo-orchitis. The patient\'s condition did not improve despite empirical antibiotic treatment with the onset of necrotic scrotal abscesses requiring surgery. Nocardia brasiliensis yielded from the removed testis culture. High-dose trimethoprim-sulfamethoxazole and ceftriaxone were started. Multiple micro-abscesses were found in the brain and spinal cord on imaging studies. After 6 weeks of dual antibiotic therapy for disseminated nocardiosis, slight regression of the brain abscesses was observed. The patient was discharged after a 6-month course of antibiotics and remained relapse-free at that time of writing these lines. Trimethoprim-sulfamethoxazole alone is meant to be pursued for 6 months thereafter. We undertook a literature review on previously reported cases of genitourinary and urological nocardiosis; to date, only 36 cases have been published with predominately involvement of kidney, prostate and testis.
    CONCLUSIONS: To the best of our knowledge, this is the first case of Nocardia brasiliensis simultaneously infecting skin, testis, brain and spinal cord in an immunocompromised patient. Knowledge on uncommon forms of nocardiosis remains scarce. This case report highlights the difficulty of diagnosing atypical nocardiosis and the importance of prompt bacteriological sampling in case of empirical antibiotics failure.
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  • 文章类型: Case Reports
    卡氏细菌是一组复杂的细菌,属于需氧腐生放线菌。尽管在免疫功能低下的患者中通常会发生诺卡病,免疫功能正常的患者也可能偶尔发生感染。在这里,我们描述了一名具有免疫能力的79岁患者中由于诺卡氏菌引起的原发性皮肤诺卡氏菌病的罕见病例。由于皮肤诺卡心症表现不同,并模仿其他皮肤感染,对临床样品进行耐酸和革兰氏染色对于获得快速和推定的诊断具有重要意义。
    The nocardiae are a complex group of bacteria belonging to the aerobic saprophytes actinomycetes. Although nocardiosis typically occurs in immunocompromised patients, infection may occasionally develop in immunocompetent patients as well. Here we describe a rare case of primary cutaneous nocardiosis due to Nocardia vinacea in an immunocompetent 79-year-old patient. Since cutaneous nocardiosis presents variably and mimics other cutaneous infections, acid-fast and Gram stainings on clinical samples are significant to obtain a rapid and presumptive diagnosis.
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  • 文章类型: Review
    背景:诺卡氏菌是引起人类感染的最常见诺卡氏菌之一。它是一种机会性病原体,经常感染免疫系统受损的人。它可以通过呼吸道或皮肤伤口侵入人体,引起局部感染,并通过血行播散影响其他器官。然而,法氏杆菌引起的菌血症并不常见。在这项研究中,我们报道了中国1例土豆素引起的菌血症。
    方法:北京协和医院收治一名80岁女性,因反复发热,右腹痛了一个半月,和右肾上腺的占领。使用血液培养和血浆宏基因组学下一代测序(mNGS)鉴定了N.Farcinica为致病病原体。临床考虑因素包括由诺卡氏菌感染引起的菌血症和肾上腺脓肿。因为病人对磺胺过敏,对亚胺培南/西司他丁和利奈唑胺进行经验性给药。不幸的是,患者最终在开始抗感染治疗后不到一个月死亡.
    结论:N.Farcinica菌血症很少见,其临床表现没有特异性。它的诊断取决于病因检查,这可以使用Sanger测序和mNGS等技术来证实。在这份报告中,我们回顾了过去十年报告的诺卡氏菌血流感染病例,希望能提高临床医师对诺卡氏菌血流感染的认识,并对其早期诊断和及时治疗有所帮助。
    BACKGROUND: Nocardia farcinica is one of the most common Nocardia species causing human infections. It is an opportunistic pathogen that often infects people with compromised immune systems. It could invade human body through respiratory tract or skin wounds, cause local infection, and affect other organs via hematogenous dissemination. However, N. farcinica-caused bacteremia is uncommon. In this study, we report a case of bacteremia caused by N. farcinica in China.
    METHODS: An 80-year-old woman was admitted to Peking Union Medical College Hospital with recurrent fever, right abdominal pain for one and a half month, and right adrenal gland occupation. N. farcinica was identified as the causative pathogen using blood culture and plasma metagenomics next-generation sequencing (mNGS). The clinical considerations included bacteremia and adrenal gland abscess caused by Nocardia infection. As the patient was allergic to sulfanilamide, imipenem/cilastatin and linezolid were empirically administered. Unfortunately, the patient eventually died less than a month after the initiation of anti-infection treatment.
    CONCLUSIONS: N. farcinica bacteremia is rare and its clinical manifestations are not specific. Its diagnosis depends on etiological examination, which can be confirmed using techniques such as Sanger sequencing and mNGS. In this report, we have reviewed cases of Nocardia bloodstream infection reported in the past decade, hoping to improve clinicians\' understanding of Nocardia bloodstream infection and help in its early diagnosis and timely treatment.
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  • 文章类型: Review
    背景:在我们对PubMed的搜索中,我们发现,文献中关于烟曲霉和白囊诺卡氏菌共同感染的报道非常稀少.大多数病例已记录在免疫系统受损或潜在肺部疾病的患者中。相比之下,我们的患者没有出现任何这些危险因素.此外,在患者病史中没有最近发生过溺水或其他事故。据我们所知,该病例代表迄今未报告的临床情况.为了增强理解,我们进行了全面的文献综述,共汇编了20例(从1984年到2023年)涉及曲霉和诺卡氏菌的共感染病例报告,从PubMed检索。
    方法:胸部CT显示双肺存在多个结节和聚集的高密度阴影。支气管镜检查发现右肺上叶顶端段粘膜充血和水肿,随着2个球形息肉新生物的存在。病理分析报告了严重的慢性炎症,组织内有曲霉的证据。支气管肺泡灌洗液的下一代测序显示存在与烟曲霉和Ncyriacigeorgica相对应的读数。通过延长微生物实验室中样品的孵育时间,可以产生烟曲霉和诺卡氏菌属的阳性培养物。
    方法:给予伏立康唑治疗烟曲霉和磺胺甲恶唑-甲氧苄啶治疗。
    结果:患者好转出院。经过6个月的电话随访,患者报告没有临床症状,他自己停药了.
    结论:在免疫功能正常的患者中,烟曲霉和Ncyriacigeorgica可以表现为共同感染。临床医生应优先考虑NGS在检测与肺部感染相关的稀有和混合病原体方面的显着优势和价值。
    BACKGROUND: In our search on PubMed, we found that reports of co-infections involving Aspergillus fumigatus and Nocardia cyriacigeorgica in the literature are notably scarce. Most cases have been documented in patients with compromised immune systems or underlying pulmonary conditions. In contrast, our patient did not present with any of these risk factors. Furthermore, there have been no recent incidents such as near-drowning or other accidents in the patient history. To the best of our knowledge, this case represents a hitherto unreported clinical scenario. To enhance comprehension, we conducted a comprehensive literature review by compiling a total of 20 case reports (spanning from 1984 to 2023) on co-infections involving Aspergillus and Nocardia species, retrieved from PubMed.
    METHODS: Chest CT revealed the presence of multiple nodules and clustered high-density shadows in both lungs. Bronchoscopy revealed mucosal congestion and edema in the apical segment of the right upper lobe of the lung, along with the presence of 2 spherical polypoid new organisms. The pathological analysis reported severe chronic inflammation with evidence of Aspergillus within the tissue. Next-Generation Sequencing of bronchoalveolar lavage fluid revealed the presence of reads corresponding to A fumigatus and N cyriacigeorgica. Positive cultures for A fumigatus and the Nocardia genus were yielded by prolonging the incubation of samples in the microbiology laboratory.
    METHODS: Treatment with voriconazole for A fumigatus and sulfamethoxazole-trimethoprim for N cyriacigeorgica infection was given.
    RESULTS: The patient improved and was discharged. After 6 months of telephone follow-up, the patient reported no clinical symptoms, discontinued the medication on his own.
    CONCLUSIONS: A fumigatus and N cyriacigeorgica can manifest as a co-infection in immunocompetent patients. Clinicians should prioritize the significant advantages and value of NGS in detecting rare and mixed pathogens associated with pulmonary infections.
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  • 文章类型: Review
    背景:中枢神经系统(CNS)诺卡氏菌属引起的罕见化脓性疾病。在免疫受损的个体中最常见。
    目的:在本研究中,我们回顾性回顾了临床表现,实验室检查,在我院使用宏基因组下一代测序(mNGS)诊断的9例中枢神经系统诺卡心症患者的治疗和结局。
    方法:我们回顾了2017年1月至2021年12月在第三附属医院神经内科确诊的9例中枢神经系统诺卡氏菌感染患者,中山大学(广州,中国)。此外,我们在PubMed上检索了与中枢神经系统诺卡氏菌感染相关的文献,纳入了2016年以来已证实的中枢神经系统诺卡氏菌病的所有病例报告.
    结果:CSF的宏基因组下一代测序(mNGS)可用于快速诊断CNS中的诺卡病,而N.farcinica是最常见的分离物种。潜在的自身免疫性疾病,包括皮质类固醇和器官移植在内的免疫抑制剂是发生CNS诺卡心症的诱发因素。脑成像中通常会出现指示脑脓肿的单个或多个过度增强环病变。甲氧苄啶-磺胺甲恶唑(TMP-SMX)用作抗菌治疗的主要药物,并与其他抗菌剂联合使用。
    结论:我们的研究表明,CSF的mNGS可用于确定和快速诊断中枢神经系统诺卡心症。
    BACKGROUND: Central nervous system (CNS) nocardiosis is a rare suppurative disease caused by the genus Nocardia. It is found most frequently in immunocompromised individuals.
    OBJECTIVE: In this study, we retrospectively reviewed the clinical presentations, laboratory examination, therapy and outcomes of 9 patients with CNS nocardiosis diagnosed using metagenomic next-generation sequencing (mNGS) in our hospital.
    METHODS: We reviewed 9 patients with confirmed diagnosis of CNS Nocardia infection from January 2017 to December 2021 in the Department of Neurology at The Third Affiliated Hospital, Sun Yat-sen University (Guangzhou, China). In addition, we searched literature related to CNS Nocardia infection on PubMed and included all case reports with proven CNS nocardiosis since 2016.
    RESULTS: The metagenomic next-generation sequencing (mNGS) of CSF can be used for the rapid diagnosis of nocardiosis in CNS and N. farcinica are the most commonly isolated species. Underlying autoimmune diseases, immunosuppressive agents including corticosteroids and organ transplantation are predisposing factors of developing CNS nocardiosis. Single or multiple hyper-enhanced ring lesions indicative of cerebral abscesses are commonly presented in brain imaging. Trimethoprim-sulfamethoxazole (TMP-SMX) is used as the primary agent for the antibacterial therapy and in combination with other antibacterial agents.
    CONCLUSIONS: Our study demonstrated that mNGS of CSF can be conducted for definitive and rapid diagnosis for CNS nocardiosis.
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  • 文章类型: Journal Article
    背景:甲氧苄啶-磺胺甲恶唑(TMP-SMX)预防是否可以预防实体器官移植受体(SOT)的诺卡心症存在争议。
    目的:评估TMP-SMX在预防SOT术后诺卡心病中的作用,它的剂量-反应关系,它对预防播散性诺卡尼病的作用,以及突破性感染时TMP-SMX耐药的风险。
    方法:系统评价和个体患者数据荟萃分析。
    方法:MEDLINE,Embase,Cochrane中央控制试验登记册,Cochrane系统评价数据库,WebofScience核心合集,和Scopus至2023年9月19日。
    方法:(i)有和没有TMP-SMX预防的SOT接受者之间的诺卡心病风险,或(ii)足够的细节来确定突破性诺卡尼病的TMP-SMX耐药率。
    方法:SOT接受者。
    方法:TMP-SMX预防与不预防。
    用于比较研究的ROBINS-E;用于非比较研究的专用工具。
    对于我们的主要结果(即,为了确定TMP-SMX对诺卡尼病风险的影响),使用一步混合效应回归模型来估计结局与暴露之间的关联.使用单变量和多变量无条件回归模型来调整潜在的混杂效应。使用等级方法评估证据的确定性。
    结果:获得了来自三项病例对照研究的个体数据(260例SOT受者,519个未感染的对照)。TMP-SMX预防与显著降低的诺卡心症风险独立相关(校正OR=0.3,95%CI0.18-0.52,证据的中度确定性)。与诺卡心病风险增加独立相关的变量是年龄较大,目前使用皮质类固醇,钙调磷酸酶抑制剂浓度高,近期急性排斥反应,较低的淋巴细胞计数,心脏移植。突破性感染(66/260,25%)通常对TMP-SMX敏感(合并比例98%,95%CI92-100)。
    结论:在SOT接受者中,TMP-SMX预防可能会降低诺卡心病的风险。在突破性感染的情况下,耐药性似乎并不常见。
    BACKGROUND: Whether trimethoprim-sulfamethoxazole (TMP-SMX) prophylaxis prevents nocardiosis in solid organ transplant (SOT) recipients is controversial.
    OBJECTIVE: To assess the effect of TMP-SMX in the prevention of nocardiosis after SOT, its dose-response relationship, its effect on preventing disseminated nocardiosis, and the risk of TMP-SMX resistance in case of breakthrough infection.
    METHODS: A systematic review and individual patient data meta-analysis.
    METHODS: MEDLINE, Embase, Cochrane Central Register of Controlled Trials, Cochrane Database of Systematic Reviews, Web of Science Core Collection, and Scopus up to 19 September 2023.
    METHODS: (a) Risk of nocardiosis between SOT recipients with and without TMP-SMX prophylaxis, or (b) sufficient details to determine the rate of TMP-SMX resistance in breakthrough nocardiosis.
    METHODS: SOT recipients.
    METHODS: TMP-SMX prophylaxis versus no prophylaxis.
    UNASSIGNED: Risk Of Bias In Non-randomized Studies-of Exposure (ROBINS-E) for comparative studies; dedicated tool for non-comparative studies.
    UNASSIGNED: For our primary outcome (i.e. to determine the effect of TMP-SMX on the risk of nocardiosis), a one-step mixed-effects regression model was used to estimate the association between the outcome and the exposure. Univariate and multivariable unconditional regression models were used to adjust for the potential confounding effects. Certainty of evidence was assessed using Grading of Recommendations Assessment, Development and Evaluation (GRADE) approach.
    RESULTS: Individual data from three case-control studies were obtained (260 SOT recipients with nocardiosis and 519 uninfected controls). TMP-SMX prophylaxis was independently associated with a significantly decreased risk of nocardiosis (adjusted OR = 0.3, 95% CI 0.18-0.52, moderate certainty of evidence). Variables independently associated with an increased risk of nocardiosis were older age, current use of corticosteroids, high calcineurin inhibitor concentration, recent acute rejection, lower lymphocyte count, and heart transplant. Breakthrough infections (66/260, 25%) were generally susceptible to TMP-SMX (pooled proportion 98%, 95% CI 92-100).
    CONCLUSIONS: In SOT recipients, TMP-SMX prophylaxis likely reduces the risk of nocardiosis. Resistance appears uncommon in case of breakthrough infection.
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  • 文章类型: Review
    背景:诺卡氏菌病是一种罕见的由诺卡氏菌引起的细菌感染。然而,已经描述了发病率的增加,因此有关流行病学和预后的数据至关重要。
    方法:在诺卡氏菌属阳性患者中进行了一项回顾性描述性研究。文化,从2019年1月到2023年1月,在葡萄牙的一家Terciary医院。
    结果:18例患者的中位年龄为63.8岁。在70%的患者中至少发现了一种免疫抑制原因。5例患者患有播散性心脏病(DN)。肺部是临床疾病最常见的部位(77.8%),诺卡氏菌在呼吸道样本中最常见。最常见的分离物种是诺卡氏菌/非洲诺卡氏菌(n=7),其次是纳卡氏菌(n=3)和假性诺卡氏菌(n=3)。大部分患者(94.4%)接受抗生素治疗,其中高达55.6%的患者接受单一疗法治疗。最常用的抗生素是甲氧苄啶-磺胺甲恶唑。选定的抗菌药物通常是有效的,利奈唑胺和复方新诺明(100%敏感性[S])和阿米卡星(94%S)对诺卡氏菌属物种的活性最高。DN的中位治疗时间(IQR)为24.2(1-51.4)周;一年的总病死率为33.3%(n=6),DN更高(66.7%)。没有观察到复发。
    结论:诺卡病是一种新出现的感染性疾病,预后较差,尤其是DN。这篇综述提供了重要的流行病学见解,并强调了更好地了解诺卡心病微生物学的重要性。这些知识可以导致抗菌治疗的优化,必要时,指导适当的手术干预措施,以防止不利的结果。
    BACKGROUND: Nocardiosis is a rare bacterial infection caused by Nocardia spp. However, an increasing incidence has been described whereby data about epidemiology and prognosis are essential.
    METHODS: A retrospective descriptive study was conducted among patients with positive Nocardia spp. culture, from January 2019 to January 2023, at a Terciary Hospital in Portugal.
    RESULTS: Nocardiosis was considered in 18 cases with a median age of 63.8-years-old. At least one immunosuppressive cause was identified in 70% of patients. Five patients had Disseminated Nocardiosis (DN). The lung was the most common site of clinical disease (77.8%) and Nocardia was most commonly identified in respiratory tract samples. The most frequently isolated species were Nocardia nova/africana (n = 7) followed by Nocardia cyriacigeorgica (n = 3) and Nocardia pseudobrasiliensis (n = 3). The majority of the patients (94.4%) received antibiotic therapy, of whom as many as 55.6% were treated with monotherapy. The most frequently prescribed antibiotic was trimethoprim-sulfamethoxazole. Selected antimicrobial agents were generally effective, with linezolid and cotrimoxazole (100% Susceptibility [S]) and amikacin (94% S) having the most activity against Nocardia species. The median (IQR) duration of treatment was 24.2 (1‒51.4) weeks for DN; The overall one-year case fatality was 33.3% (n = 6) and was higher in the DN (66.7%). No recurrence was observed.
    CONCLUSIONS: Nocardiosis is an emerging infectious disease with a poor prognosis, particularly in DN. This review offers essential epidemiological insights and underscores the importance of gaining a better understanding of the microbiology of nocardiosis. Such knowledge can lead to the optimization of antimicrobial therapy and, when necessary, guide appropriate surgical interventions to prevent unfavorable outcomes.
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  • 文章类型: Review
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  • 文章类型: Meta-Analysis
    背景:诺卡氏菌可引起局部或播散性感染。需要迅速诊断和适当治疗诺卡心症,因为它可以导致显著的发病率和死亡率。了解当地物种分布和易感性模式对于适当的经验性治疗很重要。然而,在中国,关于临床诺卡氏菌属物种的流行病学和抗菌药物敏感性的知识仍然有限。
    方法:从Pubmed、WebofScience,Embase以及中文数据库(CNKI,万方和VIP)。采用RevMan5.3软件进行Meta分析。使用随机效应模型,并使用Cochran的Q和I2统计进行测试,同时考虑到研究之间异质性的可能性。
    结果:总计,在所有招募的研究中,791个诺卡氏菌分离株被鉴定为19个物种水平。最常见的物种是N.farcinica(29.1%,230/791),其次是N.cyriacigeorgica(25.3%,200/791),巴西N.(11.8%,93/791)和耳炎奈瑟菌(7.8%,62/791)。N.farcinica和N.cyriacigeorgica分布广泛,巴西奈瑟氏菌主要在南部流行,N.otidiscaviarum主要分布在中国东部沿海省份。完全正确,70.4%(223/317)的诺卡氏菌来自呼吸道标本,16.4%(52/317)来自肺外标本,传播感染占13.3%(42/317)。敏感分离株比例如下:利奈唑胺99.5%(197/198),阿米卡星96.0%(190/198),甲氧苄啶-磺胺甲恶唑92.9%(184/198),亚胺培南64.7%(128/198)。易感性因诺卡氏菌的种类而异。
    结论:N.farcinica和N.cyriacigeorgica是最常见的孤立物种,在中国广泛分布。肺诺卡病是最常见的感染类型。甲氧苄啶-磺胺甲恶唑由于耐药率低,仍然可以作为初始诺卡氏菌感染治疗的首选药物,利奈唑胺和阿米卡星可以作为治疗诺卡心症的替代方案或联合治疗方案的选择。
    BACKGROUND: Nocardia species can cause local or disseminated infection. Prompt diagnosis and appropriate treatment of nocardiosis are required, because it can cause significant morbidity and mortality. Knowledge of local species distribution and susceptibility patterns is important to appropriate empiric therapy. However, knowledge on the epidemiology and antimicrobial susceptibility profiles of clinical Nocardia species remains limited in China.
    METHODS: The data of isolation of Nocardia species were collected from databases such as Pubmed, Web of Science, Embase as well as Chinese databases (CNKI, Wanfang and VIP). Meta-analysis was performed using RevMan 5.3 software. Random effect models were used and tested with Cochran\'s Q and I2 statistics taking into account the possibility of heterogeneity between studies.
    RESULTS: In total, 791 Nocardia isolates were identified to 19 species levels among all the recruited studies. The most common species were N. farcinica (29.1%, 230/791), followed by N. cyriacigeorgica (25.3%, 200/791), N. brasiliensis (11.8%, 93/791) and N. otitidiscaviarum (7.8%, 62/791). N. farcinica and N. cyriacigeorgica were widely distributed, N. brasiliensis mainly prevalent in the south, N. otitidiscaviarum mainly distributed in the eastern coastal provinces of China. Totally, 70.4% (223/317) Nocardia were cultured from respiratory tract specimens, 16.4% (52/317) from extra-pulmonary specimens, and 13.3% (42/317) from disseminated infection. The proportion of susceptible isolates as follows: linezolid 99.5% (197/198), amikacin 96.0% (190/198), trimethoprim-sulfamethoxazole 92.9% (184/198), imipenem 64.7% (128/198). Susceptibility varied by species of Nocardia.
    CONCLUSIONS: N. farcinica and N. cyriacigeorgica are the most frequently isolated species, which are widely distributed in China. Pulmonary nocardiosis is the most common type of infection. Trimethoprim-sulfamethoxazole can still be the preferred agent for initial Nocardia infection therapy due to the low resistance rate, linezolid and amikacin could be an alternative to treat nocardiosis or a choice in a combination regimen.
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