MECOM

MECOM
  • 文章类型: Journal Article
    通过允许微生物将煤转化为甲烷等产物,氢气,甲醇,乙醇,和其他产品,目前的煤炭矿床可以有效利用,干净,和可持续的。为了开发创新的能源生产策略和经济上可行的工业微生物开采,必须了解原位微生物煤降解的复杂性。这篇综述涵盖了各种形式的转换(如MECoM的使用,将煤转化为氢),强调,和原位使用。目前正在讨论将现场规模的中试测试转化为商业生产时的有效性。评估MECoM技术的适用性和长期可行性将需要解决这些知识差距。制定合适的营养计划并在现场利用实验室生成的数据就是例子。此外,我们建议未来研究的方向,以最大限度地提高煤炭的甲烷产量。微生物煤转化技术需要成功解决,可持续能源。
    By allowing coal to be converted by microorganisms into products like methane, hydrogen, methanol, ethanol, and other products, current coal deposits can be used effectively, cleanly, and sustainably. The intricacies of in situ microbial coal degradation must be understood in order to develop innovative energy production strategies and economically viable industrial microbial mining. This review covers various forms of conversion (such as the use of MECoM, which converts coal into hydrogen), stresses, and in situ use. There is ongoing discussion regarding the effectiveness of field-scale pilot testing when translated to commercial production. Assessing the applicability and long-term viability of MECoM technology will require addressing these knowledge gaps. Developing suitable nutrition plans and utilizing lab-generated data in the field are examples of this. Also, we recommend directions for future study to maximize methane production from coal. Microbial coal conversion technology needs to be successful in order to be resolved and to be a viable, sustainable energy source.
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  • 文章类型: Journal Article
    目的:探讨MDS1和EVI1复合物位点(MECOM)在肺腺癌(LUAD)中的临床价值。方法:生物信息学和实验验证证实了LUAD中MECOM的表达水平。通过受试者工作特征(ROC)曲线和Cox回归分析分析MECOM值。结果:LUAD患者血清MECOM水平较低,且与性别相关,TNM阶段,肿瘤大小,淋巴结转移和远处转移。ROC曲线显示,LUAD的MECOM曲线下面积为0.804,值得注意的是,晚期LUAD可达到0.889;特异性高达90%。结论:MECOM可能有助于LUAD患者的独立识别,特别是在高级阶段。
    肺腺癌是肺癌的一种常见类型,具有很高的发病率和死亡率。然而,目前仍缺乏有效鉴别肺腺癌患者的临床指标。MECOM基因编码的蛋白质是调节基因表达的DNA结合蛋白,已发现在许多癌症中发挥促癌作用,但是我们发现它可能在肺腺癌中起抑癌作用。本研究旨在证实MECOM是否可以作为肺腺癌的预测因子。我们的结果表明,肺腺癌患者的血清MECOM水平低于健康人,MECOM水平较低的患者生存率较短。也就是说,血清MECOM水平较低的患者可能提示发生肺腺癌和死亡的风险较高.因此,MECOM基因有望成为与肺腺癌和死亡风险相关的预测因子.
    Objective: We aimed to explore the clinical value of MDS1 and EVI1 complex locus (MECOM) in lung adenocarcinoma (LUAD). Methods: Bioinformatics and experimental validation confirmed MECOM expression levels in LUAD. The value of MECOM was analyzed by receiver operating characteristic (ROC) curve and Cox regression analysis. Results: Serum MECOM levels were lower in LUAD and correlated with gender, TNM stage, tumor size, lymph node metastasis and distant metastasis. The ROC curve showed that the area under the curve of MECOM was 0.804 for LUAD and, of note, could reach 0.889 for advanced LUAD; specificity was up to 90%. Conclusion: MECOM may contribute to independently identifying LUAD patients, particularly in advanced stages.
    Lung adenocarcinoma is a common type of lung cancer with a high incidence and death rate. However, clinical indicators that effectively identify lung adenocarcinoma patients are still lacking. The protein encoded by the MECOM gene is a DNA-binding protein regulating gene expression, which has been found to play a cancer-promoting role in many cancers, but we found that it may play a cancer-suppressing role in lung adenocarcinoma. This study aimed to confirm whether MECOM can be a predictor for lung adenocarcinoma. Our results showed that lung adenocarcinoma patients had lower serum MECOM levels than healthy people, and patients with lower MECOM levels had a shorter survival rate. That is, patients with lower serum MECOM levels may indicate a high risk of developing lung adenocarcinoma and death. Thus, the MECOM gene is expected to be a predictor associated with the risk of developing lung adenocarcinoma and death.
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  • 文章类型: Journal Article
    在本研究中,目的探讨热休克蛋白B7(HSPB7)对肺腺癌(LUAD)的作用及可能机制。进行生物信息学分析以探讨HSPB7表达与LUAD患者之间的关系。MTT,菌落形成,进行伤口愈合和Transwell测定以检查增殖,H1975和A549细胞的迁移和侵袭能力。进行蛋白质印迹分析以确定相应的蛋白质表达。进行了共免疫沉淀和染色质免疫沉淀测定,以揭示HSPB7与骨髓增生异常综合征1和生态病毒整合位点1复杂基因座(MECOM)之间的相互作用。此外,BALB/c裸鼠皮下注射A549细胞,并测量肿瘤的重量和大小。HSPB7在LUAD组织和细胞中下调,其表达水平与患者预后相关。细胞功能数据显示HSPB7沉默促进肺癌细胞增殖,迁移,侵袭和上皮间质转化(EMT);而HSPB7的过表达导致相反的结果。此外,生物信息学分析显示HSPB7抑制糖酵解。HSPB7降低葡萄糖消耗,乳酸生产,和乳酸脱氢酶A,己糖激酶2和丙酮酸激酶肌肉同工型2蛋白水平。结果表明MECOM是HSPB7的转录因子。总的来说,这些结果表明HSPB7受MECOM调控,HSPB7减弱LUAD细胞增殖,迁移,通过抑制糖酵解进行侵袭和EMT。
    In the present study, it was aimed to investigate the effects and potential mechanisms of heat shock protein B7 (HSPB7) on lung adenocarcinoma (LUAD). Bioinformatic analysis was performed to explore the association between HSPB7 expression and patients with LUAD. MTT, colony formation, wound healing and Transwell assays were performed to examine the proliferative, migratory and invasive abilities of H1975 and A549 cells. Western blot analysis was conducted to determine the corresponding protein expression. Co‑Immunoprecipitation and Chromatin immunoprecipitation assays were carried out to reveal the interaction between HSPB7 and myelodysplastic syndrome 1 and ecotropic viral integration site 1 complex locus (MECOM). In addition, an animal model was conducted by the subcutaneous injection of A549 cells into BALB/c nude mice, and tumor weight and size were measured. HSPB7 was downregulated in LUAD tissues and cells, and its expression level correlated with patient prognosis. Cell functional data revealed that silencing of HSPB7 promoted lung cancer cell proliferation, migration, invasion and epithelial mesenchymal transition (EMT); whereas overexpression of HSPB7 led to the opposite results. Furthermore, bioinformatics analysis showed that HSPB7 inhibited glycolysis. HSPB7 decreased glucose consumption, lactic acid production, and lactate dehydrogenase A, hexokinase 2 and pyruvate kinase muscle isoform 2 protein levels. The results demonstrated that MECOM was a transcription factor of HSPB7. Collectively, these results suggested that HSPB7 is regulated by MECOM, and that HSPB7 attenuates LUAD cell proliferation, migration, invasion and EMT by inhibiting glycolysis.
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  • 文章类型: Case Reports
    Waldenstrom巨球蛋白血症(WM)是一种罕见的B细胞起源的惰性淋巴瘤,其特征是单克隆IgM升高,以MYD88L265P突变和CXCR4突变为常见分子改变。B细胞急性淋巴细胞白血病(B-ALL)是临床异质性,以骨髓和淋巴组织中未成熟淋巴细胞的异常增殖和聚集为特征。WM和ALL是B细胞来源的血液系统恶性肿瘤,具有完全不同的临床表现和生物学特征。KMT2D和MECOM突变在ALL中非常罕见,通常表明疾病预后不良。WM和ALL与KMT2D和MECOM突变的共存尚未见报道。
    一名74岁女性患者于2018年7月被诊断为WM,并接受了硼替佐米和地塞米松的四个周期化疗。2018年11月,她接受了免疫调节剂沙利度胺作为维持治疗。2020年11月,布鲁顿的酪氨酸激酶抑制剂(BTKi)被引入中国市场,她以每天80毫克的剂量口服扎努布替尼。该疾病仍处于缓解状态。2021年12月,她出现了全身多个肿大的淋巴结。骨髓和下一代测序(NGS)表明WM和B-ALL与KMT2D和MECOM突变共存。患者接受扎努布替尼联合长春新碱和地塞米松治疗,之后,她出现了严重的骨髓抑制和败血症。病人终于得到了缓解。由于患者的年龄和不良状态,她拒绝静脉化疗,目前正在接受扎努布替尼治疗.
    WM和B-ALL的共存非常罕见,尚未有报道。KMT2D和MECOM突变的存在预示着预后不良和对常规治疗方案不敏感的可能性。BTKi通过抑制BTK激活和阻断B细胞肿瘤的一系列恶性转化来实现其抗肿瘤作用。此外,它还作用于T细胞免疫和肿瘤微环境。基于BTKi的联合治疗可以改善该患者的预后。
    Waldenstrom Macroglobulinemia (WM) is a rare and indolent lymphoma of B-cell origin characterized by elevated monoclonal IgM, with MYD88L265P mutation and CXCR4 mutation as common molecular alterations. B-cell Acute Lymphoblastic Leukemia (B-ALL) is clinically heterogeneous, characterized by abnormal proliferation and aggregation of immature lymphocytes in the bone marrow and lymphoid tissue. WM and ALL are hematologic malignancies of B-cell origin with completely different clinical manifestations and biological features. KMT2D and MECOM mutations are very rare in ALL and usually indicate poor disease prognosis. The coexistence of WM and ALL with KMT2D and MECOM mutations have not been reported.
    A 74-year-old female patient was diagnosed with WM in July 2018 and received four cycles of chemotherapy of bortezomib and dexamethasone. In November 2018, she received immunomodulator thalidomide as maintenance therapy. In November 2020, Bruton\'s Tyrosine Kinase inhibitors (BTKi) has been introduced into the Chinese market and she took zanubrutinib orally at a dose of 80 mg per day. The disease remained in remission. In December 2021, she presented with multiple enlarged lymph nodes throughout the body. Bone marrow and next-generation sequencing (NGS) suggested the coexistence of WM and B-ALL with KMT2D and MECOM mutations. The patient was treated with zanubrutinib in combination with vincristine and dexamethasone, after which she developed severe myelosuppression and septicemia. The patient finally got remission. Due to the patient\'s age and poor status, she refused intravenous chemotherapy and is currently treated with zanubrutinib.
    The coexistence of WM and B-ALL is very rare and has not been reported. The presence of both KMT2D and MECOM mutations predicts a poor prognosis and the possibility of insensitivity to conventional treatment options. BTKi achieves its anti-tumor effects by inhibiting BTK activation and blocking a series of malignant transformations in B-cell tumors. In addition, it also acts on T-cell immunity and tumor microenvironment. Combination therapy based on BTKi may improve the prognosis of this patient.
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  • 文章类型: Journal Article
    毛细胞(HCs)的永久性损伤是感觉性耳聋的主要原因。支持细胞(SC)在哺乳动物的听力恢复中是必不可少的,因为它们可以增殖并分化为HC。MDS1和EVI1复合物位点(MECOM)在早期发育和细胞分化中至关重要,并调节TGF-β信号通路以适应病理生理事件,如造血增殖,分化和细胞死亡。此外,MECOM在神经发生和颅面发育中起着至关重要的作用。然而,MECOM在耳蜗发育中的作用及其调节相关信号的方式尚未完全了解。为了解决这个问题,这项研究检测了MECOM在耳蜗发育过程中的表达,并观察到MECOM在听觉上皮形态发生的关键点显着增加,这表明MECOM可能在耳蜗的形成和HC的再生中起着至关重要的作用。同时,我们试图探索MECOM在SC增殖和HC再生中的可能作用和潜在机制。这项研究的结果表明,MECOM的过表达显着增加了内耳中SC的增殖,与TGF信号相关的Smad3和Cdkn2b的表达显著下调,对应于MECOM的过表达。总的来说,这些数据可以解释MECOM在SC增殖和转分化为HC中的重要功能,以及它的监管。MECOM之间的相互作用,Wnt,Notch和TGF-β信号可能为诱导HC的再生提供了可行的方法。
    Permanent damage to hair cells (HCs) is the leading cause of sensory deafness. Supporting cells (SCs) are essential in the restoration of hearing in mammals because they can proliferate and differentiate to HCs. MDS1 and EVI1 complex locus ( MECOM) is vital in early development and cell differentiation and regulates the TGF-β signaling pathway to adapt to pathophysiological events, such as hematopoietic proliferation, differentiation and cells death. In addition, MECOM plays an essential role in neurogenesis and craniofacial development. However, the role of MECOM in the development of cochlea and its way to regulate related signaling are not fully understood. To address this problem, this study examined the expression of MECOM during the development of cochlea and observed a significant increase of MECOM at the key point of auditory epithelial morphogenesis, indicating that MECOM may have a vital function in the formation of cochlea and regeneration of HCs. Meanwhile, we tried to explore the possible effect and potential mechanism of MECOM in SC proliferation and HC regeneration. Findings from this study indicate that overexpression of MECOM markedly increases the proliferation of SCs in the inner ear, and the expression of Smad3 and Cdkn2b related to TGF signaling is significantly down-regulated, corresponding to the overexpression of MECOM. Collectively, these data may provide an explanation of the vital function of MECOM in SC proliferation and trans-differentiation into HCs, as well as its regulation. The interaction between MECOM, Wnt, Notch and the TGF-β signaling may provide a feasible approach to induce the regeneration of HCs.
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  • 文章类型: Journal Article
    由于缺乏强大的靶标,肺鳞状细胞癌(LUSC)的靶向治疗仍然是一个挑战。这里,我们通过使用成簇的规则间隔短回文重复序列(CRISPR)介导的方法筛选3对原发性肿瘤和患者来源的异种移植物(PDX)中通常扩增的38个基因,将MECOM确定为LUSC的候选治疗靶点.高MECOM表达水平与不良预后相关。MECOM在LUSC细胞系中的强制表达促进了肿瘤干细胞(CSC)的特性,其敲除抑制CSC表型。此外,使用带有衔接子的腺病毒全身递送CRISPR介导的MECOM耗尽盒,它由针对上皮细胞粘附分子(EpCAM)的单链片段变量(scFv)与柯萨奇病毒和腺病毒受体的胞外域融合组成,一个保护者,它由与腺病毒的六邻体对称相连的scFv组成,可以特异性靶向皮下和原位LUSC并延缓肿瘤生长。这项研究可以为LUSC提供一种新的治疗策略,具有高疗效和特异性。
    Targeted therapy for lung squamous cell carcinoma (LUSC) remains a challenge due to the lack of robust targets. Here, we identified MECOM as a candidate of therapeutic target for LUSC by screening 38 genes that were commonly amplified in three pairs of primary tumors and patient-derived xenografts (PDXs) using a clustered regularly interspaced short palindromic repeats (CRISPR)-mediated approach. High MECOM expression levels were associated with poor prognosis. Forced expression of MECOM in LUSC cell lines promoted cancer stem cell (CSC) properties, and its knockout inhibited CSC phenotypes. Furthermore, systemic delivery of CRISPR-mediated MECOM depletion cassette using adenovirus with an adaptor, which is composed of a single-chain fragment variable (scFv) against epithelial cell adhesion molecules (EpCAM) fused to the ectodomain of coxsackievirus and adenovirus receptor, and a protector, which consists of the scFv connected to the hexon symmetry of the adenovirus, could specifically target subcutaneous and orthotopic LUSC and retard tumor growth. This study could provide a novel therapeutic strategy for LUSC with high efficacy and specificity.
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  • 文章类型: Journal Article
    相当比例的先天性桡骨滑膜(RUS)患者的病因尚不清楚。这项研究旨在调查没有已知原因的RUS的遗传原因。
    对患有RUS的患者进行了调查。进行外显子组测序和/或Sanger测序。还进行了生物信息学分析。对感兴趣的变体评价致病性。
    我们在8个家族中与RUS相关的MECOM(编码EVI1)中鉴定出独特的错义变体。其中,6个家族在残基R781中具有变体,包括3个具有R781C(c.2341C>T)的家族,2个家庭与R781H(c.2342G>A),和1个家庭与R781L(c.2342G>T)。另外2个变体包括1个家族中的I783T(c.2348T>C)和1个家族中的Q777E(c.2329C>G)。所有这些变体聚集在EVI1的第九个锌指基序内。表型评估发现,这些携带突变MECOM的RUS患者中大多数都有手指畸形,但他们都没有可识别的血液学异常.功能实验表明,MECOMR781C导致TGF-β介导的转录反应发生改变。
    这项研究通过关注RUS而不是血液学异常来检查MECOM变体。EVI1中的R781残基是人RUS变体的热点。突变MECOM是家族性RUS的第二大常见原因。
    The etiology for a considerable proportion of patients with congenital radioulnar synostosis (RUS) remains unclear. This study aimed to investigate the genetic cause of RUS without a known cause.
    Patients with RUS were investigated. Exome sequencing and/or Sanger sequencing was performed. Bioinformatics analysis was also performed. Pathogenicity was evaluated for variants of interest.
    We identified unique missense variants in MECOM (encodes EVI1) associated with RUS in 8 families. Of them, 6 families had variants in residue R781, including 3 families with R781C (c.2341C>T), 2 families with R781H (c.2342G>A), and 1 family with R781L (c.2342G>T). Another 2 variants included I783T (c.2348T>C) in 1 family and Q777E (c.2329C>G) in 1 family. All these variants were clustered within the ninth zinc finger motif of EVI1. Phenotype evaluation identified that most of these patients with RUS harboring mutant MECOM had finger malformations, but none of them had identifiable hematological abnormalities. Functional experiments showed that MECOM R781C led to alterations in TGF-β-mediated transcriptional responses.
    This study examined MECOM variants by focusing on RUS instead of hematological abnormalities. The R781 residue in EVI1 is a hotspot for human RUS variants. Mutant MECOM is the second most common cause for familial RUS.
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  • 文章类型: Journal Article
    背景:MDS1和EVI1复合物基因座(MECOM,也称为PRDM3)和含PR结构域16(PRDM16)是两种与许多恶性肿瘤相关的高度相关的锌指转录因子。然而,MECOM和PRDM16在肺腺癌(LUAD)预后和肿瘤免疫浸润中的作用机制尚不明确。
    方法:癌症基因组图谱(TCGA),Oncomine,UALCAN,GEPIA,和TIMER数据库进行搜索,以确定MECOM和PRDM16的表达之间的关系,临床病理特征,免疫浸润,和LUAD的预后。CBioPortal研究了这两个基因的共表达基因,并通过GO和KEGG分析阐明了MECOM和PRDM16相关基因的潜在机制。利用STRING数据库进一步构建共表达基因的蛋白质-蛋白质相互作用网络,中心基因由Cytoscape鉴定。最后,进行qRT-PCR以鉴定LUAD中靶基因的mRNA水平。
    结果:LUAD中MECOM和PRDM16的mRNA水平下调(p<0.05),这两个基因的低表达与年龄有关,性别,吸烟持续时间,组织亚型,可怜的舞台,淋巴结转移状态,TP53突变,和LUAD的预后(p<0.05)。还发现MECOM和PRDM16与多种免疫细胞亚群及其标志物的表达相关。KEGG分析显示两者主要富集在细胞周期,细胞衰老,DNA复制,和p53信号通路。重要的是,通过qRT-PCR还发现这两个基因的mRNA水平在LUAD的临床样品中降低。
    结论:MECOM和PRDM16可能作为潜在的预后生物标志物,控制免疫细胞募集到LUAD。
    BACKGROUND: The MDS1 and EVI1 complex locus (MECOM, also called PRDM3) and PR domain containing 16 (PRDM16) are two highly related zinc finger transcription factors associated with many malignancies. However, the mechanisms of MECOM and PRDM16 in prognosis and tumor immune infiltration in lung adenocarcinoma (LUAD) remain uncertain.
    METHODS: The Cancer Genome Atlas (TCGA), Oncomine, UALCAN, GEPIA, and TIMER databases were searched to determine the relationship between the expression of MECOM and PRDM16, clinicopathological features, immune infiltration, and prognosis in LUAD. Coexpressed genes of the two genes were investigated by CBioPortal, and the potential mechanism of MECOM- and PRDM16-related genes was elucidated by GO and KEGG analyses. STRING database was utilized to further construct the protein-protein interaction network of the coexpressed genes, and the hub genes were identified by Cytoscape. Finally, qRT-PCR was performed to identify the mRNA levels of the target genes in LUAD.
    RESULTS: mRNA levels of MECOM and PRDM16 were downregulated in LUAD (p < 0.05), and the low expression of the two genes was associated with the age, gender, smoking duration, tissue subtype, poor stage, nodal metastasis status, TP53 mutation, and prognosis in LUAD (p < 0.05). MECOM and PRDM16 were also found to be correlated with the expression of a variety of immune cell subsets and their markers. KEGG analysis showed that both of them were mainly enriched in the cell cycle, cellular senescence, DNA replication, and p53 signaling pathway. Importantly, the mRNA levels of the two genes were also found to be decreased in the clinical samples of LUAD by qRT-PCR.
    CONCLUSIONS: MECOM and PRDM16 may serve as potential prognostic biomarkers which govern immune cell recruitment to LUAD.
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  • 文章类型: Case Reports
    The MECOM gene encoding a zinc finger protein that functions as a transcription factor, was located on chromosome 3q26, and rearrangements of MECOM often cause its overexpression in acute myeloid leukemia (AML). We identified H2AFY as a novel fusion gene partner of MECOM in an elderly male AML patient with cryptic 3q26 rearrangement using the whole transcriptome sequencing, who carried out abnormal karyotype of 46,XY,t(3;5)(q27;q31),add(14)(p11). We validated the existence of the unreported H2AFY-MECOM fusion gene by RT-PCR and Sanger DNA sequencing, and detected mutations of NRAS and BCOR in this patient. In addition, we found abnormally elevated expression of MECOM in this patient by quantitative-polymerase chain reaction (RQ-PCR). Further research is needed to investigate functional characterizations of this novel fusion in the development of AML.
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