Invasive fungal diseases

侵袭性真菌病
  • 文章类型: Journal Article
    侵袭性真菌病(IFD)越来越被认为是与发病率和死亡率升高有关的重要问题。遗憾的是,用于管理IFD的可用抗真菌疗法受到限制.新的证据表明,烯醇化酶有望成为对抗IFD的潜在靶蛋白;然而,目前存在特异性针对烯醇化酶的抗真菌药物缺乏。这项研究表明,异叶阿瓦卡酮(IBC)在体外和体内均表现出值得注意的抗真菌功效。此外,我们的研究表明,IBC有效地靶向白色念珠菌的Eno1(CaEno1),导致糖酵解途径的抑制。此外,我们的研究表明,与人类Eno1(hEno1)相比,IBC对CaEno1具有更高的亲和力,IBC侧链中类异戊二烯的存在在其抑制烯醇化酶活性的能力中起着至关重要的作用。这些发现有助于理解靶向Eno1的抗真菌方法,确定IBC是人类病原真菌中Eno1的潜在抑制剂。
    Invasive fungal diseases (IFDs) are becoming increasingly acknowledged as a significant concern linked to heightened rates of morbidity and mortality. Regrettably, the available antifungal therapies for managing IFDs are constrained. Emerging evidence indicates that enolase holds promise as a potential target protein for combating IFDs; however, there is currently a deficiency in antifungal medications specifically targeting enolase. This study establishes that isobavachalcone (IBC) exhibits noteworthy antifungal efficacy both in vitro and in vivo. Moreover, our study has demonstrated that IBC effectively targets Eno1 in Candida albicans (CaEno1), resulting in the suppression of the glycolytic pathway. Additionally, our research has indicated that IBC exhibits a higher affinity for CaEno1 compared to human Eno1 (hEno1), with the presence of isoprenoid in the side chain of IBC playing a crucial role in its ability to inhibit enolase activity. These findings contribute to the comprehension of antifungal approaches that target Eno1, identifying IBC as a potential inhibitor of Eno1 in human pathogenic fungi.
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  • 文章类型: Journal Article
    侵袭性真菌病(IFDs)的发病率在全球范围内呈上升趋势,特别是在免疫功能低下的患者中,导致显著的发病率和死亡率。目前临床抗真菌药物,比如多烯,唑类,和棘白菌素,面对病原真菌越来越多的耐药性。因此,迫切需要开发新的抗真菌药物。海洋衍生的次级代谢产物代表了具有不同化学结构和药理活性特征的宝贵资源。虽然已经鉴定了许多具有有希望的抗真菌活性的化合物,仍然缺乏全面审查,阐明其具体的基本机制。在这次审查中,我们已经汇编了来自海洋生物的抗真菌化合物的摘要,突出了它们针对各种真菌细胞成分的不同作用机制,包括细胞壁,细胞膜,线粒体,染色体,药物外排泵,和几个生物过程,包括囊泡运输和菌丝和生物膜的生长。本文综述了海洋生物次生代谢产物的抗真菌作用机制,为后续抗真菌药物的开发提供了参考。
    The incidence of invasive fungal diseases (IFDs) is on the rise globally, particularly among immunocompromised patients, leading to significant morbidity and mortality. Current clinical antifungal agents, such as polyenes, azoles, and echinocandins, face increasing resistance from pathogenic fungi. Therefore, there is a pressing need for the development of novel antifungal drugs. Marine-derived secondary metabolites represent valuable resources that are characterized by varied chemical structures and pharmacological activities. While numerous compounds exhibiting promising antifungal activity have been identified, a comprehensive review elucidating their specific underlying mechanisms remains lacking. In this review, we have compiled a summary of antifungal compounds derived from marine organisms, highlighting their diverse mechanisms of action targeting various fungal cellular components, including the cell wall, cell membrane, mitochondria, chromosomes, drug efflux pumps, and several biological processes, including vesicular trafficking and the growth of hyphae and biofilms. This review is helpful for the subsequent development of antifungal drugs due to its summary of the antifungal mechanisms of secondary metabolites from marine organisms.
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  • 文章类型: Journal Article
    全面了解致病性酵母的流行病学和抗真菌敏感性,进行了中国抗真菌药物耐药性监测试验(CARST-真菌)研究。通过核糖体DNA测序鉴定所有酵母分离物。使用CLSIM27-A4肉汤微量稀释法进行抗真菌敏感性。分析了抗性/非广型(NWT)念珠菌分离株中抗性相关基因的序列和表达水平。共收集了261例患者的269种非复制酵母分离株。大约一半的酵母分离株(127,47.2%)从血液中回收,其次是腹水(46,17.1%)。白色念珠菌仍然是最普遍的(120,44.6%),其次是近平滑梭菌复合体(50,18.6%),C.热带(40,14.9%),和C.glabrata(36,13.4%)。14种(11.7%)白色念珠菌分离株和1种(2.0%)近扁平念珠菌分离株对三唑具有抗性/NWT。只有42.5%(17/40)的热带念珠菌对所有三唑类敏感。其中19例(47.5%)NWT对泊沙康唑和8例(20%)对三唑具有交叉抗性。在C.glabrata中,20(55.6%)和8(22.2%)株对伏立康唑和泊沙康唑耐药/NWT,分别,4株(10.3%)对三唑具有交叉抗性。伊沙武康唑是对常见念珠菌分离株活性最高的三唑。除了2株对棘白菌素具有交叉抗性的光滑梭菌分离株对POS也是NWT,并定义为多药耐药外,棘白菌类对常见念珠菌具有良好的活性。所有分离株均为WT至AMB。对于不太常见的物种,黏胶红酵母对棘白菌素和FLC表现出较高的MIC,和1个分离的阿沙希毛孢菌对除AMB以外的所有抗真菌药物均显示出较高的MIC。在对三唑耐药的念珠菌分离株中,在10/14白色念珠菌和6/23热带念珠菌中检测到ERG11突变,而热带21/23C.显示MDR1过表达。CDR1、CDR2和SNQ2的过表达在14、13和8的25种耐三唑的光滑梭菌分离株中,在FKS2中,有5株具有PDR1突变的分离株和2株具有棘白菌素抗性的分离株具有S663P突变。总的来说,CARST-真菌研究表明,尽管白色念珠菌仍然是最主要的物种,非C.白色念珠菌种类所占比例较高。热带梭菌和光滑梭菌对三唑的抗性显著。已经出现了光滑梭菌和不太常见的酵母的多药抗性分离株。
    To have a comprehensive understanding of epidemiology and antifungal susceptibilities in pathogenic yeasts, the China Antifungal Resistance Surveillance Trial (CARST-fungi) study was conducted. All yeast isolates were identified by ribosomal DNA sequencing. Antifungal susceptibilities were performed using CLSI M27-A4 broth microdilution method. Sequence and expression level of resistant-related genes in resistant/non-wide-type (NWT) Candida isolates were analyzed. Totally 269 nonduplicate yeast isolates from 261 patients were collected. About half of the yeast isolates (127, 47.2%) were recovered from blood, followed by ascetic fluid (46, 17.1%). C. albicans remained the most prevalent (120, 44.6%), followed by C. parapsilosis complex (50, 18.6%), C. tropicalis (40, 14.9%), and C. glabrata (36, 13.4%). Fourteen (11.7%) C. albicans isolates and 1 (2.0%) C. parapsilosis isolate were resistant/NWT to triazoles. Only 42.5% (17/40) C. tropicalis were susceptible/WT to all the triazoles, with 19 (47.5%) isolates NWT to posaconazole and 8 (20%) cross-resistant to triazoles. Among C. glabrata, 20 (55.6%) and 8 (22.2%) isolates were resistant/NWT to voriconazole and posaconazole, respectively, and 4 (10.3%) isolates were cross-resistant to triazoles. Isavuconazole was the most active triazole against common Candida isolates. Except for 2 isolates of C. glabrata cross-resistant to echinocandins which were also NWT to POS and defined as multidrug-resistant, echinocandins exhibit good activity against common Candida species. All isolates were WT to AMB. For less common species, Rhodotorula mucilaginosa exhibited high MICs to echinocandins and FLC, and 1 isolate of Trichosporon asahii showed high MICs to all the antifungals except AMB. Among triazole-resistant Candida isolates, ERG11 mutations were detected in 10/14 C. albicans and 6/23 C. tropicalis, while 21/23 C. tropicalis showed MDR1 overexpression. Overexpression of CDR1, CDR2, and SNQ2 exhibited in 14, 13, and 8 of 25 triazole-resistant C. glabrata isolates, with 5 isolates harboring PDR1 mutations and 2 echinocandins-resistant isolates harboring S663P mutation in FKS2. Overall, the CARST-fungi study demonstrated that although C. albicans remain the most predominant species, non-C. albicans species accounted for a high proportion. Triazole-resistance is notable among C. tropicalis and C. glabrata. Multidrug-resistant isolates of C. glabrata and less common yeast have been emerging.
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  • 文章类型: Journal Article
    背景:对于接受异基因造血干细胞移植(allo-HSCT)的患者,最佳的二级抗真菌预防(SAP)方案尚无共识。这项研究的目的是评估泊沙康唑口服混悬液作为allo-HSCT患者侵袭性真菌病(IFD)二级预防的有效性和安全性。
    方法:我们回顾性回顾了在2016年6月至2021年1月期间接受泊沙康唑口服混悬液作为全身抗真菌预防的IFD患者的临床数据,并在HSCT后随访1年。比较了有IFD病史的患者(n=30)和没有IFD病史的患者(n=93)的临床结果。
    结果:在有IFD病史的组中,预防失败的1年累积发生率为58.3%,在没有IFD病史的组中为41.6%(p=0.459)。已证明的累积发生率,在有IFD病史的组中,allo-HSCT后1年内可能或可能的IFD为23.1%,在没有IFD病史的组中为14.1%(p=0.230)。在有IFD病史的组和无IFD病史的组中,在allo-HSCT后1年内已证实或可能的IFD的累积发生率之间没有显着差异(p=0.807)。多因素logistic回归分析显示,在预防泊沙康唑口服混悬液中,巨细胞病毒病是移植后IFD发生的危险因素。有IFD病史的患者和无IFD病史的患者之间的总生存期没有显着差异(P=0.559)。
    结论:我们的研究支持具有IFD病史和正常胃肠道吸收的allo-HSCT接受者可以选择泊沙康唑口服混悬液作为安全有效的SAP选择。
    BACKGROUND: There is no consensus on the optimal secondary antifungal prophylaxis (SAP) regimen in patients receiving allogeneic hematopoietic stem cell transplantation (allo-HSCT). The purpose of this study was to evaluate the efficacy and safety of posaconazole oral suspension as secondary prophylaxis of invasive fungal disease (IFD) for allo-HSCT patients.
    METHODS: We retrospectively reviewed clinical data from prior IFD patients who received posaconazole oral suspension as systemic antifungal prophylaxis between June 2016 and January 2021 and have a follow-up period of 1 year after HSCT. The clinical outcomes of patients with a prior history of IFD (n = 30) and those without (n = 93) were compared.
    RESULTS: The 1-year cumulative incidence of prophylaxis failure was 58.3% in the group with prior history of IFD and 41.6% in the group without a prior history of IFD (p = 0.459). The cumulative incidence of proven, probable or possible IFD within 1 year after allo-HSCT was 23.1% in the group with prior history of IFD and 14.1% in the group without prior history of IFD (p = 0.230). There was no significant difference between the cumulative incidence of proven or probable IFD within 1-year after allo-HSCT in the group with a prior history of IFD and the group without (p = 0.807). Multivariate logistic regression revealed cytomegalovirus disease as risk factor for post-transplantation IFD occurrence in posaconazole oral suspension prophylaxis. There was not a significant difference in overall survival between the patients with IFD history and those without (P = 0.559).
    CONCLUSIONS: Our study support that allo-HSCT recipients with a prior history of IFD and normal GI absorption can choose posaconazole oral suspension as a safe and effective SAP option.
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  • 文章类型: Journal Article
    Background: Distinguishing ICU patients with candidaemia can help with the precise prescription of antifungal drugs to create personalized guidelines. Previous prediction models of candidaemia have primarily used traditional logistic models and had some limitations. In this study, we developed a machine learning algorithm trained to predict candidaemia in patients with new-onset systemic inflammatory response syndrome (SIRS). Methods: This retrospective, observational study used clinical information collected between January 2013 and December 2017 from three hospitals. The ICU patient data were used to train 4 machine learning algorithms-XGBoost, Support Vector Machine (SVM), Random Forest (RF), ExtraTrees (ET)-and a logistic regression (LR) model to predict patients with candidaemia. Results: Of the 8,002 cases of new-onset SIRS (in 7,932 patients) included in the analysis, 137 new-onset SIRS cases (in 137 patients) were blood culture positive for candidaemia. Risk factors, such as fungal colonization, diabetes, acute kidney injury, the total number of parenteral nutrition days and renal replacement therapy, were important predictors of candidaemia. The XGBoost machine learning model outperformed the other models in distinguishing patients with candidaemia [XGBoost vs. SVM vs. RF vs. ET vs. LR; area under the curve (AUC): 0.92 vs. 0.86 vs. 0.91 vs. 0.90 vs. 0.52, respectively]. The XGBoost model had a sensitivity of 84%, specificity of 89% and negative predictive value of 99.6% at the best cut-off value. Conclusions: Machine learning algorithms can potentially predict candidaemia in the ICU and have better efficiency than previous models. These prediction models can be used to guide antifungal treatment for ICU patients when SIRS occurs.
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  • 文章类型: Journal Article
    Matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) has been accepted as a rapid, accurate, and less labor-intensive method in the identification of microorganisms in clinical laboratories. However, there is limited data on systematic evaluation of its effectiveness in the identification of phylogenetically closely-related yeast species. In this study, we evaluated two commercially available MALDI-TOF systems, Autof MS 1000 and Vitek MS, for the identification of yeasts within closely-related species complexes. A total of 1,228 yeast isolates, representing 14 different species of five species complexes, including 479 of Candida parapsilosis complex, 323 of Candida albicans complex, 95 of Candida glabrata complex, 16 of Candida haemulonii complex (including two Candida auris), and 315 of Cryptococcus neoformans complex, collected under the National China Hospital Invasive Fungal Surveillance Net (CHIF-NET) program, were studied. Autof MS 1000 and Vitek MS systems correctly identified 99.2% and 89.2% of the isolates, with major error rate of 0.4% versus 1.6%, and minor error rate of 0.1% versus 3.5%, respectively. The proportion of isolates accurately identified by Autof MS 1000 and Vitek MS per each yeast complex, respectively, was as follows; C. albicans complex, 99.4% vs 96.3%; C. parapsilosis complex, 99.0% vs 79.1%; C glabrata complex, 98.9% vs 94.7%; C. haemulonii complex, 100% vs 93.8%; and C. neoformans, 99.4% vs 95.2%. Overall, Autof MS 1000 exhibited good capacity in yeast identification while Vitek MS had lower identification accuracy, especially in the identification of less common species within phylogenetically closely-related species complexes.
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  • 文章类型: Journal Article
    OBJECTIVE: In patients with hematologic malignancies (HM), bloodstream infections (BSI) and invasive fungal disease (IFD) remain important complications causing considerable mortality and morbidity. At present, the morbidity of IFD and the strategies to initiate antifungal treatment in HM patients with BSI remain unclear.
    METHODS: Patient characteristics, infection-related variables, and therapy-related features of 1374 HM patients with proven BSI from three hospitals were reviewed to investigate the epidemiology, risk factors and prognosis of IFD.
    RESULTS: The morbidity of proven and probable IFD in HM patients with BSI was 11.2%, and the mortality of those patients was 40.5%. Existing IFD risk scores were not accurate enough in distinguishing these patients benefiting from antifungal prophylaxis. Multivariate logistic regression identified age >45 years, profound neutropenia, hypoproteinemia, and use of vasopressors as independent variables associated with IFD morbidity in HM patients with BSI. In patients with proven and probable IFD patients, age >45 years, Pitt bacteremia score >3, use of vasopressors, abnormal blood coagulation, and initiation of antifungal therapy within 72 hrs after the onset of fever were independent prognostic factors. The mortality was significantly reduced in patients with high-risk factors of IFD if they initiate antifungal treatment within 72 hrs after the onset of fever compared to the patients not.
    CONCLUSIONS: The morbidity and mortality of IFD increase significantly in HM patients with BSI. Early antifungal therapy may improve prognosis in HM patients with BSI complicated with IFD risk factors.
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  • 文章类型: Journal Article
    Invasive fungal disease (IFD) is a major infectious complication in patients with hematological malignancies. In this study, we examined 4889 courses of chemotherapy in patients with hematological diseases to establish a training dataset (n = 3500) by simple random sampling to develop a weighted risk score for proven or probable IFD through multivariate regression, which included the following variables: male patients, induction chemotherapy for newly diagnosed or relapsed disease, neutropenia, neutropenia longer than 10 days, hypoalbuminemia, central-venous catheter, and history of IFD. The patients were classified into three groups, which had low (0-10, ~1.2%), intermediate (11-15, 6.4%), and high risk ( > 15, 17.5%) of IFD. In the validation set (n = 1389), the IFD incidences of the groups were ~1.4%, 5.0%, and 21.4%. In addition, we demonstrated that antifungal prophylaxis offered no benefits in low-risk patients, whereas benefits were documented in intermediate (2.1% vs. 6.6%, P = 0.007) and high-risk patients (8.4% vs. 23.3%, P = 0.007). To make the risk score applicable for clinical settings, a pre-chemo risk score that deleted all unpredictable factors before chemotherapy was established, and it confirmed that anti-fungal prophylaxis was beneficial in patients with intermediate and high risk of IFD. In conclusion, an objective, weighted risk score for IFD was developed, and it may be useful in guiding antifungal prophylaxis.
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  • 文章类型: Journal Article
    联合国“一个健康”倡议倡导全球和地方卫生当局内部多个部门的合作,以实现更好的公共卫生管理成果的目标。由曲霉属物种构成的新兴全球健康威胁是管理挑战的一个例子,该挑战将受益于“一个健康”方法。在本文中,我们探讨了分子流行病学在曲霉威胁管理和加强OneHealth计划中的潜在作用.在公共卫生水平上有效管理曲霉需要开发快速准确的诊断工具,不仅要从物种水平识别感染病原体,而且个体基因型的水平,包括药物敏感性模式。虽然已经开发了多种分子方法用于曲霉诊断,它们在低于物种水平的临床环境中的使用非常有限,特别是在资源贫乏的国家和地区。在这里,我们提供了曲霉威胁管理的框架,并描述了分子流行病学和实验进化方法如何用于通过药物暴露预测耐药性。我们的分析强调了用于分子诊断的基因座和方法标准化的必要性,以及跨曲霉种和地理区域的监测。这种标准化将能够在国家和全球层面以及通过“一个健康”方法进行比较,加强曲霉威胁管理工作。
    The United Nations\' One Health initiative advocates the collaboration of multiple sectors within the global and local health authorities toward the goal of better public health management outcomes. The emerging global health threat posed by Aspergillus species is an example of a management challenge that would benefit from the One Health approach. In this paper, we explore the potential role of molecular epidemiology in Aspergillus threat management and strengthening of the One Health initiative. Effective management of Aspergillus at a public health level requires the development of rapid and accurate diagnostic tools to not only identify the infecting pathogen to species level, but also to the level of individual genotype, including drug susceptibility patterns. While a variety of molecular methods have been developed for Aspergillus diagnosis, their use at below-species level in clinical settings has been very limited, especially in resource-poor countries and regions. Here we provide a framework for Aspergillus threat management and describe how molecular epidemiology and experimental evolution methods could be used for predicting resistance through drug exposure. Our analyses highlight the need for standardization of loci and methods used for molecular diagnostics, and surveillance across Aspergillus species and geographic regions. Such standardization will enable comparisons at national and global levels and through the One Health approach, strengthen Aspergillus threat management efforts.
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  • 文章类型: Journal Article
    及时诊断侵袭性真菌病(IFDs)很重要,因为延迟开始治疗与死亡率增加相关.然而,免疫功能低下患者IFDs的早期诊断仍然很困难.目前用于IFD的常规诊断方法不够有效。分子测试,例如基于聚合酶链反应(PCR)的检测,由于其敏感性和特异性,有很大的潜力来提高IFD的早期诊断。在本研究中,评价了接受骨髓移植的IFD患者的全真菌PCR检测的诊断性能.结果表明,与传统的血液培养方法相比,泛真菌PCR测定通过鉴定更多的真菌物种为临床决策提供了快速方便的指导。此外,根据EORTC/MSG标准,在IFD患者的诊断中,全真菌PCR检测的敏感性为93%,特异性为71%.因此,本研究的结论是,报道的基于PCR的方法在早期IFD诊断中是有效和敏感的,未来应纳入IFD治疗的临床决策.
    Timely diagnosis of invasive fungal diseases (IFDs) is important, as delays in treatment initiation are associated with increased mortality rates. However, early diagnosis of IFDs in immunocompromised patients remains difficult. The conventional diagnostic methods currently used for IFDs are not sufficiently effective. Molecular tests, such as polymerase chain reaction (PCR)-based assays, have great potential to improve the early diagnosis of IFDs due to their sensitivity and specificity. In the present study, the diagnostic performance of panfungal PCR assays in IFD patients who received bone marrow transplantation was evaluated. The results suggested that panfungal PCR assay offered a quick and convenient guide for clinical decision-making by identifying higher numbers of fungal species in comparison with the conventional blood culture method. Furthermore, panfungal PCR assay exhibited a sensitivity of 93% and a specificity of 71% in the diagnosis of IFD patients based on the EORTC/MSG criteria. Thus, the present study concluded that the reported PCR-based method was effective and sensitive in early IFD diagnosis and should be integrated into clinical decision-making for the treatment of IFDs in the future.
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