DNA Mismatch Repair

DNA 错配修复
  • 文章类型: Journal Article
    In recent years, immune checkpoint inhibitors (ICIs) have been widely used in malignant solid tumors with remarkable efficacy. However, in colorectal cancer (CRC), ICIs have shown significant therapeutic effects only in patients with highly microsatellite unstable/mismatch repair-deficient metastatic CRC and these patients are only a minority of all CRC patients. In contrast, the majority of patients, those with microsatellite stable (MSS)/mismatch repair-complete (pMMR)-type metastatic CRC, could hardly benefit from ICI monotherapies, and immune combination therapies have become the key to solveing this clinical challenge. This article introduces the common patterns and possible mechanisms of immune-combination therapies for MSS/pMMR-type CRC, the exploration and progress made in the application of immune-combination therapies, as well as the possible predictive markers of efficacy of immune therapies. The prospects and directions of ICIs in the treatment of MSS/pMMR-type CRC are also discussed.
    近年来,免疫检查点抑制剂(ICIs)在恶性实体肿瘤中应用广泛且疗效显著。然而,在结直肠癌(CRC)中,ICIs仅对占少数的微卫星高度不稳定/错配修复缺失型转移性CRC表现出显著的治疗效果,而占大多数的微卫星稳定(MSS)/错配修复完整(pMMR)型转移性CRC几乎不能从ICIs单药治疗中获益,免疫联合治疗成为破解这一临床难题的关键。文章介绍了MSS/pMMR型CRC免疫联合治疗的常见模式和可能机制,总结归纳了MSS/pMMR型CRC免疫联合治疗方面所做的探索和取得的进展以及免疫治疗疗效的可能预测标志物,对ICIs在MSS/pMMR型CRC治疗中的应用前景进行了展望。.
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  • 文章类型: Journal Article
    开放标签,II期RATIONALE-209研究评估了tislelizumab(抗程序性细胞死亡蛋白1抗体)作为微卫星不稳定性高(MSI-H)/错配修复缺陷(dMMR)肿瘤的组织不可知单药治疗.
    曾接受过治疗的成年人,纳入局部晚期不可切除或转移性MSI-H/dMMR实体瘤.患者每3周静脉注射tislelizumab200mg。客观缓解率(ORR;主要终点),响应持续时间(DoR),和无进展生存期(PFS)由独立审查委员会进行评估(实体瘤反应评估标准1.1版).
    80例患者被纳入并接受治疗;75例(93.8%)患者在基线时具有可测量的疾病。大多数患有转移性疾病,并接受了至少一种晚期/转移性疾病的先前治疗(n=79;98.8%)。在初步分析(数据截止时间2021年7月8日;中位随访15.2个月),总体ORR[46.7%;95%置信区间(95%CI),35.1-58.6;单侧P<0.0001],肿瘤特异性亚组的ORR[结直肠(n=46):39.1%(95%CI,25.1-54.6);胃/胃食管交界处(n=9):55.6%(95%CI,21.2-86.3);其他(n=20):60.0%(95%CI,36.1-80.9)]预设的历史对照ORR为10%;5例(6.7%)患者完全缓解.中位数DoR,PFS,长期随访未达到总生存期(数据截止时间2022年12月5日;中位随访28.9个月).Tislelizumab耐受性良好,没有意外的安全信号。53.8%的患者发生≥3级的治疗相关不良事件(TRAEs);7.5%的患者因TRAEs而停止治疗。
    Tislelizumab在以前接受过治疗的患者中显示出显着的ORR改善,局部晚期不可切除或转移性MSI-H/dMMR肿瘤,通常耐受性良好。
    UNASSIGNED: The open-label, phase II RATIONALE-209 study evaluated tislelizumab (anti-programmed cell death protein 1 antibody) as a tissue-agnostic monotherapy for microsatellite instability-high (MSI-H)/mismatch repair-deficient (dMMR) tumors.
    UNASSIGNED: Adults with previously treated, locally advanced unresectable or metastatic MSI-H/dMMR solid tumors were enrolled. Patients received tislelizumab 200 mg intravenously every 3 weeks. Objective response rate (ORR; primary endpoint), duration of response (DoR), and progression-free survival (PFS) were assessed by independent review committee (Response Evaluation Criteria in Solid Tumors v1.1).
    UNASSIGNED: Eighty patients were enrolled and treated; 75 (93.8%) patients had measurable disease at baseline. Most had metastatic disease and received at least one prior therapy for advanced/metastatic disease (n=79; 98.8%). At primary analysis (data cutoff July 8, 2021; median follow-up 15.2 months), overall ORR [46.7%; 95% confidence interval (95% CI), 35.1-58.6; one-sided P<0.0001] and ORR across tumor-specific subgroups [colorectal (n=46): 39.1% (95% CI, 25.1-54.6); gastric/gastroesophageal junction (n=9): 55.6% (95% CI, 21.2-86.3); others (n=20): 60.0% (95% CI, 36.1-80.9)] were significantly greater with tislelizumab vs. a prespecified historical control ORR of 10%; five (6.7%) patients had complete responses. Median DoR, PFS, and overall survival were not reached with long-term follow-up (data cutoff December 5, 2022; median follow-up 28.9 months). Tislelizumab was well tolerated with no unexpected safety signals. Treatment-related adverse events (TRAEs) of grade ≥3 occurred in 53.8% of patients; 7.5% of patients discontinued treatment due to TRAEs.
    UNASSIGNED: Tislelizumab demonstrated a significant ORR improvement in patients with previously treated, locally advanced unresectable or metastatic MSI-H/dMMR tumors and was generally well tolerated.
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  • 文章类型: Journal Article
    背景:具有错配修复缺陷/微卫星不稳定性高(dMMR/MSI-H)状态的结直肠癌(CRC)患者通常被认为对辅助化疗(ACT)无反应。线粒体转录因子A(TFAM)是线粒体DNA拷贝数(mtDNA-CN)表达所必需的。根据先前的研究结果表明,TFAM的频繁截断突变会影响MSICRC细胞的化疗抗性,本研究旨在探讨mtDNA-CN作为dMMRCRC患者ACT疗效预测生物标志物的潜力.
    方法:使用定量实时聚合酶链反应(qRT-PCR)评估308例dMMRCRC患者的MtDNA-CN水平,包括180例II期和128例III期患者。收集临床病理和治疗数据。该研究检查了mtDNA-CN水平与预后之间的关系,以及ACT获益对dMMRCRC患者的影响。亚组分析主要基于肿瘤分期和mtDNA-CN水平进行。采用Kaplan-Meier和Cox回归模型评价mtDNA-CN对无病生存期(DFS)和总生存期(OS)的影响。
    结果:在肿瘤组织中观察到mtDNA-CN表达显著减少,在dMMRCRC患者中,较高的mtDNA-CN水平与改善的DFS(73.4%vs85.7%;P=0.0055)和OS(82.5%vs90.3%;P=0.0366)相关。Cox回归分析确定高mtDNA-CN是DFS(风险比[HR]0.547;95%置信区间[CI]0.321-0.934;P=0.0270)和OS(HR0.520;95%CI0.272-0.998;P=0.0492)的独立保护因素。值得注意的是,对于mtDNA-CN升高的dMMRCRC患者,ACT显著提高了DFS(74.6%vs93.4%;P=0.0015)和OS(81.0%vs96.7%;P=0.0017),包括患有II期或III期疾病的患者。
    结论:mtDNA-CN水平与患有dMMR的II期或III期CRC患者的预后相关。mtDNA-CN升高是一个强有力的预后因素,提示有dMMR的II期和III期CRC患者的ACT结局改善。这些发现表明mtDNA-CN作为指导该人群中个性化ACT治疗的生物标志物的潜在用途。
    BACKGROUND: Colorectal cancer (CRC) patients with mismatch repair-deficient/microsatellite instability-high (dMMR/MSI-H) status are conventionally perceived as unresponsive to adjuvant chemotherapy (ACT). The mitochondrial transcription factor A (TFAM) is required for mitochondrial DNA copy number (mtDNA-CN) expression. In light of previous findings indicating that the frequent truncating-mutation of TFAM affects the chemotherapy resistance of MSI CRC cells, this study aimed to explore the potential of mtDNA-CN as a predictive biomarker for ACT efficacy in dMMR CRC patients.
    METHODS: Levels of MtDNA-CN were assessed using quantitative real-time polymerase chain reaction (qRT-PCR) in a cohort of 308 CRC patients with dMMR comprising 180 stage II and 128 stage III patients. Clinicopathologic and therapeutic data were collected. The study examined the association between mtDNA-CN levels and prognosis, as well as the impact of ACT benefit on dMMR CRC patients. Subgroup analyses were performed based mainly on tumor stage and mtDNA-CN level. Kaplan-Meier and Cox regression models were used to evaluate the effect of mtDNA-CN on disease-free survival (DFS) and overall survival (OS).
    RESULTS: A substantial reduction in mtDNA-CN expression was observed in tumor tissue, and higher mtDNA-CN levels were correlated with improved DFS (73.4% vs 85.7%; P = 0.0055) and OS (82.5% vs 90.3%; P = 0.0366) in dMMR CRC patients. Cox regression analysis identified high mtDNA-CN as an independent protective factor for DFS (hazard ratio [HR] 0.547; 95% confidence interval [CI] 0.321-0.934; P = 0.0270) and OS (HR 0.520; 95% CI 0.272-0.998; P = 0.0492). Notably, for dMMR CRC patients with elevated mtDNA-CN, ACT significantly improved DFS (74.6% vs 93.4%; P = 0.0015) and OS (81.0% vs 96.7%; P = 0.0017), including those with stage II or III disease.
    CONCLUSIONS: The mtDNA-CN levels exhibited a correlation with the prognosis of stage II or III CRC patients with dMMR. Elevated mtDNA-CN emerges as a robust prognostic factor, indicating improved ACT outcomes for stages II and III CRC patients with dMMR. These findings suggest the potential utility of mtDNA-CN as a biomarker for guiding personalized ACT treatment in this population.
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  • 文章类型: Journal Article
    背景:微卫星不稳定性(MSI)和错配修复(MMR)检测在评估预后和治疗选择方面很有价值。然而,常规检测方法如免疫组织化学(IHC)受限于结果不完全一致以及较长的周转时间.TrueMark™MSI分析是一种新型的MSI分析解决方案,但缺乏对中国结直肠癌(CRC)患者的研究支持。
    方法:收集通过IHC鉴定的60dMMR和60pMMRCRC样品,并使用TrueMark™MSI测定用13个标记的扩展组检测它们的MSI状态。评估并分析了TrueMark™MSI测试和MMRIHC分析之间的总体性能和诊断一致性。
    结果:根据TrueMark™测试,120个(45.8%)CRC中的55个被鉴定为MSI高(MSI-H),在≥4/13标记处不稳定。与MMRIHC分析相比,实现了94.2%的总体百分比一致性和0.883的Kappa。对于七个不一致的样本,进行了肿瘤突变负荷分析,结果支持TrueMark™检验诊断.此外,通过多元逻辑回归模型建立了由NR-21、NR-24、NR-27、ABI-16、ABI-17和ABI-20B组成的优化面板,并且在训练集和验证集中与用于MSI检测的13标记组显示100%的一致性。
    结论:TrueMark™MSI提供了一种快速、可靠且高度自动化的中国CRC患者MSI检测解决方案,我们建立的新的6标记小组显示出值得进一步评估的希望。
    BACKGROUND: Microsatellite instability (MSI) and mismatch repair (MMR) detection is valuable in assessing prognosis and treatment options. However, the conventional detection methods such as immunohistochemistry (IHC) are limited by not fully consistent results as well as a long turnaround time. TrueMark™ MSI Assay is a novel solution for MSI analysis, but lack of research support in the Chinese colorectal cancer (CRC) patients.
    METHODS: 60 dMMR and 60 pMMR CRC samples identified by IHC were collected and their MSI status were detected using TrueMark™ MSI assay with an expanded panel of 13 markers. The overall performance and diagnostic concordance between TrueMark™ MSI test and MMR IHC analysis were assessed and analyzed.
    RESULTS: According to the TrueMark™ test, 55 out of the 120 (45.8 %) CRCs were identified as MSI-high (MSI-H) with an instability at ≥ 4/13 markers. Compared with the MMR IHC analysis, an overall percent agreement of 94.2 % and a Kappa of 0.883 were achieved. For the seven inconsistent samples, tumor mutation burden analysis was performed and the results supported the diagnosis by TrueMark™ test. To confirm the robustness of the above findings, a validation was performed in an independent cohort comprising 51 consecutive CRCs. Furthermore, an optimized panel composed of NR-21, NR-24, NR-27, ABI-16, ABI-17 and ABI-20B was developed by multivariate logistic regression model, and showed 100 % agreement with the 13-marker panel for MSI detection in both the derivation and validation sets.
    CONCLUSIONS: TrueMark™ MSI provides a fast, reliable and highly automated solution to MSI detection in Chinese CRC patients, and the new 6-marker panel we established shows promise deserving further evaluation.
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  • 文章类型: Journal Article
    背景:免疫检查点抑制剂(ICIs)在新辅助和辅助环境中的长期生存益处对于具有错配修复缺陷(dMMR)或微卫星不稳定性高(MSI-H)的结直肠癌(CRC)和胃癌(GC)尚不清楚。
    方法:这项回顾性研究纳入了接受至少一剂新辅助ICIs(新辅助队列,NAC)或佐剂ICIs(佐剂队列,AC)在中国的17个中心。如果所有肿瘤病变均可彻底切除,则IV期疾病患者也符合资格。
    结果:在NAC(n=124)中,客观反应率分别为75.7%和55.4%,分别,在CRC和GC中,病理完全缓解率分别为73.4%和47.7%,分别。3年无病生存率(DFS)和总生存率(OS)分别为96%(95CI90-100%)和CRC的100%(中位随访时间[mFU]29.4个月),分别,GC(MFU33.0个月)分别为84%(72-96%)和93%(85-100%),分别。在AC(n=48)中,3年DFS和OS率为94%(84-100%),CRC(MFU35.5个月)为100%,分别,GC(MFU40.4个月)分别为92%(82-100%)和96%(88-100%),分别。在7名远处复发的患者中,4人接受了PD1和CTLA4联合或不联合化疗和靶向药物的双重阻断,有三个部分反应和一个进行性疾病。
    结论:经过相对较长的随访,这项研究表明,在dMMR/MSI-HCRC和GC中,新佐剂和佐剂ICIs可能都与有希望的DFS和OS有关,这应该在进一步的随机临床试验中得到证实。
    BACKGROUND: The long-term survival benefit of immune checkpoint inhibitors (ICIs) in neoadjuvant and adjuvant settings is unclear for colorectal cancers (CRC) and gastric cancers (GC) with deficiency of mismatch repair (dMMR) or microsatellite instability-high (MSI-H).
    METHODS: This retrospective study enrolled patients with dMMR/MSI-H CRC and GC who received at least one dose of neoadjuvant ICIs (neoadjuvant cohort, NAC) or adjuvant ICIs (adjuvant cohort, AC) at 17 centers in China. Patients with stage IV disease were also eligible if all tumor lesions were radically resectable.
    RESULTS: In NAC (n = 124), objective response rates were 75.7% and 55.4%, respectively, in CRC and GC, and pathological complete response rates were 73.4% and 47.7%, respectively. The 3-year disease-free survival (DFS) and overall survival (OS) rates were 96% (95%CI 90-100%) and 100% for CRC (median follow-up [mFU] 29.4 months), respectively, and were 84% (72-96%) and 93% (85-100%) for GC (mFU 33.0 months), respectively. In AC (n = 48), the 3-year DFS and OS rates were 94% (84-100%) and 100% for CRC (mFU 35.5 months), respectively, and were 92% (82-100%) and 96% (88-100%) for GC (mFU 40.4 months), respectively. Among the seven patients with distant relapse, four received dual blockade of PD1 and CTLA4 combined with or without chemo- and targeted drugs, with three partial response and one progressive disease.
    CONCLUSIONS: With a relatively long follow-up, this study demonstrated that neoadjuvant and adjuvant ICIs might be both associated with promising DFS and OS in dMMR/MSI-H CRC and GC, which should be confirmed in further randomized clinical trials.
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  • 文章类型: Journal Article
    背景:由DNA错配修复(MMR)缺陷引起的微卫星不稳定性(MSI)在发生中具有重要意义,结直肠癌(CRC)的诊断和治疗。
    目的:本研究旨在分析CRC错配修复状态与临床特征的关系。
    方法:确定了2018年至2020年在两个中心接受手术的2029例CRC患者的组织病理学结果和临床特征。在通过机器学习算法筛选临床特征的重要性之后,根据免疫组织化学结果将患者分为错配修复缺陷组(dMMR)和错配修复熟练组(pMMR),用统计学方法观察两组间的临床特征.
    结果:dMMR和pMMR组在组织学类型上有显著差异,TNM阶段,肿瘤最大直径,淋巴结转移,分化等级,粗糙的外观,和血管侵入。MLH1组之间在年龄上有显著差异,组织学类型,TNM阶段,淋巴结转移,肿瘤位置,入侵的深度。MSH2组年龄差异显著。MSH6组年龄差异显著,组织学类型,TNM阶段。PMS2组之间在淋巴结转移和肿瘤位置方面存在显着差异。CRC以MLH1和PMS2联合表达缺失为主(41.77%)。MLH1和MSH2之间以及MSH6和PMS2之间也存在正相关。
    结论:粘液腺癌的比例,突出型,dMMRCRC的分化较差,但淋巴结转移是罕见的。值得注意的是,MMR蛋白的表达在CRC疾病的不同阶段具有不同的预后意义。
    BACKGROUND: Microsatellite instability (MSI) caused by DNA mismatch repair (MMR) deficiency is of great significance in the occurrence, diagnosis and treatment of colorectal cancer (CRC).
    OBJECTIVE: This study aimed to analyze the relationship between mismatch repair status and clinical characteristics of CRC.
    METHODS: The histopathological results and clinical characteristics of 2029 patients who suffered from CRC and underwent surgery at two centers from 2018 to 2020 were determined. After screening the importance of clinical characteristics through machine learning algorithms, the patients were divided into deficient mismatch repair (dMMR) and proficient mismatch repair (pMMR) groups based on the immunohistochemistry results and the clinical feature data between the two groups were observed by statistical methods.
    RESULTS: The dMMR and pMMR groups had significant differences in histologic type, TNM stage, maximum tumor diameter, lymph node metastasis, differentiation grade, gross appearance, and vascular invasion. There were significant differences between the MLH1 groups in age, histologic type, TNM stage, lymph node metastasis, tumor location, and depth of invasion. The MSH2 groups were significantly different in age. The MSH6 groups had significant differences in age, histologic type, and TNM stage. There were significant differences between the PMS2 groups in lymph node metastasis and tumor location. CRC was dominated by MLH1 and PMS2 combined expression loss (41.77%). There was a positive correlation between MLH1 and MSH2 and between MSH6 and PMS2 as well.
    CONCLUSIONS: The proportion of mucinous adenocarcinoma, protruding type, and poor differentiation is relatively high in dMMR CRCs, but lymph node metastasis is rare. It is worth noting that the expression of MMR protein has different prognostic significance in different stages of CRC disease.
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  • 文章类型: English Abstract
    Objective: To investigate the clinicopathological characteristics and prognostic factors of sporadic mismatch repair deficient (dMMR) colorectal cancer. Methods: A total of 120 cases of sporadic dMMR colorectal cancer from July 2015 to April 2021 were retrospectively collected in Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College. Patients with Lynch syndrome; synchronous multiple colorectal cancers; preoperative anti-tumor treatments such as chemotherapy and radiotherapy; and those with incomplete follow-up information were excluded based on family history and next-generation sequencing (NGS) test results. Immunohistochemical stains were used to detect the expression of mismatch repair proteins, methylation-specific PCR for methylation testing, and fluorescent PCR for BRAF V600E gene mutation detection. The clinical and pathological data, and gene mutation status were analyzed. Follow-up was done to assess survival and prognosis including progression-free survival and overall survival rate. Results: Sporadic dMMR colorectal cancer occurred more frequently in the right side of the colon, in females, and in the elderly. Morphologically, it was mostly moderately-differentiated, and most patients had low-grade tumor budding. In terms of immunohistochemical expression, MLH1 and PMS2 loss were dominant, and there were age and location-specificities in protein expression. MLH1 methylation was commonly detected in elderly female patients and rare in young male patients; while MLH1 and PMS2 deficiency, and BRAF V600E mutation occurred more often on the right side (P<0.05). The 3-year and 5-year progression-free survival rates were 90.7% and 88.7% respectively, and the 3-year and 5-year overall survival rates were 92.8% and 90.7% respectively. Tumor budding status was an independent risk factor affecting patient recurrence (hazard ratio=3.375, 95% confidence interval: 1.060-10.741, P=0.039), patients with low-grade tumor budding had better prognosis, and those with medium or high-grade tumor budding had poor prognosis. Conclusion: For dMMR colorectal cancer patients, tumor budding status is an independent risk factor for recurrence.
    目的: 深入探讨散发性错配修复缺陷(dMMR)结直肠癌的临床病理学特征,并分析影响其预后的关键因素。 方法: 回顾性收集2015年7月至2021年4月在中国医学科学院 北京协和医学院 北京协和医院接受治疗的120例散发性dMMR结直肠癌患者的资料。根据家族史及二代测序检测结果排除林奇综合征患者,排除同时性多发结直肠癌术前进行放化疗等抗肿瘤治疗以及随访资料缺失的患者。采用免疫组织化学方法检测错配修复蛋白的表达情况,利用甲基化特异性PCR方法进行甲基化检测,通过荧光PCR方法对BRAF V600E基因突变进行筛查。主要观察指标包括临床病理资料、基因突变状况、随访数据以及生存与预后分析。预后指标主要关注疾病无进展生存期和总体生存期。 结果: 散发性dMMR结直肠癌更常见于右半结肠、女性和老年患者,形态学以中分化居多,存在低级别肿瘤出芽的患者占多数。免疫组织化学表达方面,以MLH1、PMS2缺失为主,且蛋白表达有年龄及部位的特殊性。MLH1甲基化多见于老年女性患者,而在MLH1和PMS2缺失的年轻男性患者中较为少见。BRAF V600E基因突变在右半结肠的肿瘤中检出频率更高(P<0.05)。此类肿瘤患者的3年和5年无进展生存率分别为90.7%和88.7%,3年和5年总体生存率分别为92.8%和90.7%。肿瘤出芽状态是影响肿瘤复发的独立危险因素(风险比=3.375,95%置信区间:1.060~10.741,P=0.039),其中低级别肿瘤出芽的患者预后较好,而中、高级别肿瘤出芽的患者预后较差。 结论: 在散发性dMMR结直肠癌患者中,肿瘤出芽状态是影响肿瘤复发的独立危险因素。.
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  • 文章类型: English Abstract
    Objective: To analyze the differences in clinicopathological features of colon cancers and survival between patients with right- versus left-sided colon cancers. Methods: This was a retrospective cohort study. Information on patients with colon cancer from January 2016 to August 2020 was collected from the prospective registry database at Peking Union Medical College Hospital . Primary tumors located in the cecum, ascending colon, and proximal two-thirds of the transverse colon were defined as right-sided colon cancers (RCCs), whereas primary tumors located in the distal third of the transverse colon, descending colon, or sigmoid colon were defined as left-sided colon cancers (LCCs). Clinicopathological features were compared using the χ2 test or Mann-Whitney U test. Survival was estimated by Kaplan-Meier curves and the log-rank test. Factors that differed significantly between the two groups were identified by multivariate survival analyses performed with the Cox proportional hazards function. One propensity score matching was performed to eliminate the effects of confounding factors. Results: The study cohort comprised 856 patients, with TNM Stage I disease, 391 (45.7%) with Stage II, and 336 (39.3%) with Stage III, including 442 (51.6%) with LCC and 414 (48.4%) with RCC and 129 (15.1%). Defective mismatch repair (dMMR) was identified in 139 patients (16.2%). Compared with RCC, the proportion of men (274/442 [62.0%] vs. 224/414 [54.1%], χ2=5.462, P=0.019), body mass index (24.2 [21.9, 26.6] kg/m2 vs. 23.2 [21.3, 25.5] kg/m2, U=78,789.0, P<0.001), and well/moderately differentiated cancer (412/442 [93.2%] vs. 344/414 [83.1%], χ2=22.266, P<0.001) were higher in the LCC than the RCC group. In contrast, the proportion of dMMR (40/442 [9.0%] vs. 99/414 [23.9%], χ2=34.721, P<0.001) and combined vascular invasion (106/442[24.0%] vs. 125/414[30.2%], χ2=4.186, P=0.041) were lower in the LCC than RCC group. The median follow-up time for all patients was 48 (range 33, 59) months. The log-rank test revealed no significant differences in disease-free survival (DFS) (P=0.668) or overall survival (OS) (P=0.828) between patients with LCC versus RCC. Cox proportional hazards model showed that dMMR was significantly associated with a longer DFS (HR=0.419, 95%CI: 0.204‒0.862, P=0.018), whereas a higher proportion of T3-4 (HR=2.178, 95%CI: 1.089‒4.359, P=0.028), N+ (HR=2.126, 95%CI: 1.443‒3.133, P<0.001), and perineural invasion (HR=1.835, 95%CI: 1.115‒3.020, P=0.017) were associated with poor DFS. Tumor location was not associated with DFS or OS (all P>0.05). Subsequent analysis showed that RCC patients with dMMR had longer DFS than did RCC patients with pMMR (HR=0.338, 95%CI: 0.146‒0.786, P=0.012). However, the difference in OS between the two groups was not statistically significant (HR=0.340, 95%CI:0.103‒1.119, P=0.076). After propensity score matching for independent risk factors for DFS, the log-rank test revealed no significant differences in DFS (P=0.343) or OS (P=0.658) between patients with LCC versus RCC, whereas patient with dMMR had better DFS (P=0.047) and OS (P=0.040) than did patients with pMMR. Conclusions: Tumor location is associated with differences in clinicopathological features; however, this has no impact on survival. dMMR status is significantly associated with longer survival: this association may be stronger in RCC patients.
    目的: 分析非转移性结肠癌不同肿瘤位置(左半结肠或右半结肠)患者的临床病理特征及生存的差异,探讨肿瘤位置和错配修复状态(MMR)对生存的影响。 方法: 采用回顾性队列研究的方法。检索北京协和医院结直肠外科结肠癌前瞻性登记数据库2016年1月至2020年8月期间,接受根治性切除、且病理检查证实为非转移性结肠腺癌患者的病例资料和随访信息。将起源于中肠,位于回盲部、升结肠和横结肠近2/3的肿瘤定义为右半结肠癌;而将起源于后肠,位于横结肠远1/3、降结肠和乙状结肠的肿瘤定义为左半结肠癌。使用χ2检验或Mann-Whitney U检验比较两组患者临床病理特征的差异,使用Kaplan-Meier曲线和Log-rank检验进行两组患者的生存分析并比较组间的无病生存率(DFS)和总体生存率(OS)。使用Cox回归分析生存的影响因素,使用倾向性评分匹配以调整混杂后再进行生存分析。 结果: 共纳入856例结肠癌患者,其中肿瘤TNM分期Ⅰ期129例(15.1%),Ⅱ期391例(45.7%),Ⅲ期336例(39.3%);错配修复缺陷(dMMR)139例(16.2%)。左半结肠癌442例(51.6%,左半结肠癌组),右半结肠癌414例(48.4%,右半结肠癌组)。相比右半结肠癌,左半结肠癌患者的男性比例高[62.0%(274/442)比54.1%(224/414),χ2=5.462,P=0.019],中位体质指数也高[24.2(21.9,26.6)kg/m2比23.2(21.3,25.5)kg/m2,U=78 789.0,P<0.001],高、中分化腺癌比例[93.2%(412/442)比83.1%(344/414),χ2=22.266,P<0.001]更高;dMMR状态[9.0%(40/442)比23.9%(99/414),χ2=34.721,P<0.001]和合并脉管侵犯[24.0%(106/442)比30.2%(125/414),χ2=4.186,P=0.041]比例更低。所有患者中位随访时间48(33,59)个月。Log-rank检验结果显示,左半结肠癌组患者与右半结肠癌组患者的DFS(P=0.668)和OS(P=0.828)差异无统计学意义。多因素Cox回归分析发现,dMMR是结肠癌患者DFS的独立保护因素(HR=0.419,95%CI:0.204~0.862,P=0.018);T3~4(HR=2.178,95%CI:1.089~4.359,P=0.028)、N+(HR=2.126,95%CI:1.443~3.133,P<0.001)和神经侵犯(HR=1.835,95%CI:1.115~3.020,P=0.017)是DFS的独立危险因素。肿瘤位置不是影响非转移性结肠癌患者DFS和OS的独立因素(均P>0.05)。亚组分析发现,在右半结肠癌组患者中,dMMR患者的DFS优于错配修复正常(pMMR)患者(HR=0.338,95%CI:0.146~0.786,P=0.012),但是两组患者的OS差异无统计学意义(HR=0.340,95%CI:0.103~1.119,P=0.076)。对DFS的独立危险因素进行倾向性得分匹配后,Log-rank检验结果显示,两组患者的DFS(P=0.343)和OS(P=0.658)差异无统计学意义,而dMMR患者的DFS(P=0.047)和OS(P=0.040)均优于pMMR患者。 结论: 不同肿瘤位置的非转移性结肠癌患者其临床病理特征存在差异;但患者的生存与肿瘤位置无关,而与MMR有关,dMMR状态与更好的生存有关,在右半结肠癌患者中更为突出。.
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  • 文章类型: Journal Article
    产生精确组合基因组修饰的技术非常适合于解剖复杂表型的多基因基础并对合成基因组进行工程改造。用工程核酸酶进行的基因组修饰可通过不精确的同源性定向修复导致不良的修复结果。需要不可切割的基因编辑策略。真核多重基因组工程(eMAGE)在酿酒酵母中产生精确的组合基因组修饰,而不会产生DNA断裂或使用工程核酸酶。这里,我们系统地优化eMAGE以实现90%的编辑频率,减少工作流时间,并将编辑距离扩展到20kb。我们进一步设计了一个可诱导的显性负错配修复系统,允许通过eMAGE进行高效编辑,同时抑制由错配修复失活导致的背景突变率升高17倍。我们应用这些进展来构建人类雌激素受体α和孕激素受体的配体结合域中的癌症相关突变文库,以了解它们对配体非依赖性自激活的影响。我们验证了该酵母模型捕获了人类乳腺癌模型中表征的自激活突变,并进一步导致发现了几种先前未表征的自激活突变。这项工作证明了基因组编辑的无切割方法的开发和优化,非常适合于需要高效多重编辑和最少背景突变的应用。
    Technologies that generate precise combinatorial genome modifications are well suited to dissect the polygenic basis of complex phenotypes and engineer synthetic genomes. Genome modifications with engineered nucleases can lead to undesirable repair outcomes through imprecise homology-directed repair, requiring non-cleavable gene editing strategies. Eukaryotic multiplex genome engineering (eMAGE) generates precise combinatorial genome modifications in Saccharomyces cerevisiae without generating DNA breaks or using engineered nucleases. Here, we systematically optimize eMAGE to achieve 90% editing frequency, reduce workflow time, and extend editing distance to 20 kb. We further engineer an inducible dominant negative mismatch repair system, allowing for high-efficiency editing via eMAGE while suppressing the elevated background mutation rate 17-fold resulting from mismatch repair inactivation. We apply these advances to construct a library of cancer-associated mutations in the ligand-binding domains of human estrogen receptor alpha and progesterone receptor to understand their impact on ligand-independent autoactivation. We validate that this yeast model captures autoactivation mutations characterized in human breast cancer models and further leads to the discovery of several previously uncharacterized autoactivating mutations. This work demonstrates the development and optimization of a cleavage-free method of genome editing well suited for applications requiring efficient multiplex editing with minimal background mutations.
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  • 文章类型: Journal Article
    背景:DNA错配修复-精通/微卫星稳定(pMMR/MSS)结直肠癌(CRC)患者,占所有CRC病例的85%,对免疫检查点抑制剂的反应较差(即,抗PD-1抗体)。患有局部晚期癌症的pMMR/MSSCRC患者需要有效的联合治疗。
    方法:在这项试点研究中,我们给予6个术前剂量的抗PD-1抗体sintilimab的每2周周期(以200毫克的固定剂量),奥沙利铂,5-FU/CF(mFOLFOX6)联合5剂贝伐单抗(减少剂量以防止手术延迟)治疗cT4NxM0结肠癌或上段直肠癌患者。在最后一次新辅助治疗后约2周进行根治性手术。主要终点是病理性完全缓解(pCR)。我们还评估了主要病理反应(MPR,≤10%残留活肿瘤),放射学和病理学回归,安全,和肿瘤突变负荷(TMB),和肿瘤微环境(TME)特征。
    结果:截止日期(2023年9月),纳入22例cT4NxM0pMMR/MSS结肠癌或上直肠癌患者,中位随访时间为24.7个月(IQR:21.1-26.1)。所有患者均接受R0手术切除,无治疗相关手术延迟。22例切除肿瘤中有12例发生pCR(54.5%),22例患者中有18例发生MPR(81.8%)。在截止日期,所有的病人都活着,21/22无复发。2/22(9.1%)患者发生3级或更高的治疗相关不良事件。在pCR肿瘤中,两个被发现携带POLE突变。病理消退程度明显大于放射学消退程度(p=1.35×10-8)。pCR肿瘤和预处理活检组织中肿瘤和基质中CD3/CD4细胞的数量明显低于非pCR肿瘤(分别为p=0.038和p=0.015)。
    结论:新辅助药sintilimab联合贝伐单抗和mFOLFOX6几乎没有副作用,没有延误手术,并导致54.5%和81.8%的病例出现pCR和非pCR,分别。肿瘤和间质中CD3/CD4表达下调与pCR有关。然而,PD-1阻断增强靶向化疗的分子机制需要进一步研究.
    BACKGROUND: Patients with DNA mismatch repair-proficient/microsatellite stable (pMMR/MSS) colorectal cancer (CRC), which accounts for 85% of all CRC cases, display a poor respond to immune checkpoint inhibitors (i.e., anti-PD-1 antibodies). pMMR/MSS CRC patients with locally advanced cancers need effective combined therapies.
    METHODS: In this pilot study, we administered six preoperative doses of each 2-week cycle of the anti-PD-1 antibody sintilimab (at a fixed dose of 200 mg), oxaliplatin, and 5-FU/CF (mFOLFOX6) combined with five doses of bevacizumab (the number of doses was reduced to prevent surgical delays) to patients with cT4NxM0 colon or upper rectal cancers. And radical surgery was performed approximately 2 weeks after the last dose of neoadjuvant therapy. The primary endpoint was a pathologic complete response (pCR). We also evaluated major pathologic response (MPR, ≤10% residual viable tumor), radiological and pathological regression, safety, and tumor mutation burden (TMB), and tumor microenvironment (TME) characteristics.
    RESULTS: By the cutoff date (September 2023), 22 patients with cT4NxM0 pMMR/MSS colon or upper rectal cancers were enrolled and the median follow-up was 24.7 months (IQR: 21.1-26.1). All patients underwent R0 surgical resection without treatment-related surgical delays. pCR occurred in 12 of 22 resected tumors (54.5%) and MPR occurred in 18 of 22 (81.8%) patients. At the cutoff date, all patients were alive, and 21/22 were recurrence-free. Treatment-related adverse events of grade 3 or higher occurred in of 2/22 (9.1%) patients. Among the pCR tumors, two were found to harbor POLE mutations. The degree of pathological regression was significantly greater than that of radiological regression (p = 1.35 × 10-8). The number of CD3+/CD4+ cells in the tumor and stroma in pretreated biopsied tissues was markedly lower in pCR tumors than in non-pCR tumors (p = 0.038 and p = 0.015, respectively).
    CONCLUSIONS: Neoadjuvant sintilimab combined with bevacizumab and mFOLFOX6 was associated with few side effects, did not delay surgery, and led to pCR and non-pCR in 54.5% and 81.8% of the cases, respectively. Downregulation of CD3/CD4 expression in the tumor and stroma is related to pCR. However, the molecular mechanisms underlying PD-1 blockade-enhanced targeted chemotherapy require further investigation.
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