Aeromonas dhakensis

  • 文章类型: Case Reports
    达克气单胞菌与软组织感染有关,菌血症和胃肠炎。成人呼吸系统的参与极为罕见。我们报告了一例没有基础疾病的患者因达克氏杆菌引起的暴发性肺炎和菌血症。
    一名26岁的男子在河里游泳后突然患上肺炎。尽管重症监护室采取了密集的支持措施,他在入院后13小时和首次出现症状后4天死亡。尸检显示革兰氏阴性菌丰富,大量炎症细胞浸润,水肿,肺组织坏死和出血。从入院时的血培养物和插管后的支气管肺泡灌洗液(BALF)中分离出达克氏A。此外,还通过宏基因组下一代测序(mNGS)测定在肺组织中检测到达克酵母。感染可能来自河水。
    接触水生环境后出现暴发性肺炎的患者,应提醒dhakensis,mNGS可以通过比传统细菌培养更敏感和特异性来帮助检测水生病原体。
    UNASSIGNED: Aeromonas dhakensis is associated with soft tissue infection, bacteremia and gastroenteritis. Involvement of respiratory system in adults is extremely rare. We report a case of fulminant pneumonia and bacteremia due to A. dhakensis in a patient without underlying diseases.
    UNASSIGNED: A 26-year-old man became ill suddenly with pneumonia after swimming in a river. Despite intensive support measures in the intensive care unit, he died 13 hours after admission and 4 days after his first symptoms. Autopsy showed abundant Gram-negative bacteria, massive inflammatory cell infiltration, edema, necrosis and hemorrhage in lung tissue. A. dhakensis was isolated from blood culture taken at admission and bronchoalveolar lavage fluid (BALF) after intubation. Moreover, A. dhakensis was also detected in lung tissue by metagenomic next-generation sequencing (mNGS) assay. The infection may have come from river water.
    UNASSIGNED: In patients who develop a fulminant pneumonia after contacting an aquatic environment, A. dhakensis should be alerted and mNGS may aid in the detection of aquatic pathogens by being more sensitive and specific versus traditional bacterial culture.
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  • 文章类型: Case Reports
    达克气单胞菌是革兰氏阴性细菌。近年来,达克气单胞菌由于其毒力强、预后差,逐渐引起人们的重视。由达克气单胞菌引起的肺部感染的临床报道很少。
    一名急性T淋巴细胞白血病患者化疗后出现骨髓抑制,达克气单胞菌继发肺部感染,因发烧住院。患者接受了炎症标志物检测,胸部成像,血培养,支气管肺泡灌洗,胸膜引流,并对肺泡灌洗液和胸膜液进行宏基因组下一代测序,以获得达克气单胞菌感染的证据,用四代头孢菌素联合氟喹诺酮类抗生素治疗。患者病情明显改善。
    在肺部感染病原体中,达克气单胞菌相对罕见。一旦在临床工作中培养了气单胞菌菌株,应对检出的样本进行病原测序,以便早期准确诊断和有效的抗感染治疗。
    UNASSIGNED: Aeromonas dhakensis is a gram-negative bacterium. In recent years, Aeromonas dhakensis has gradually attracted increasing attention due to its strong virulence and poor prognosis. Clinical reports of pulmonary infection caused by Aeromonas dhakensis are rare.
    UNASSIGNED: A patient with acute T lymphoblastic leukemia experienced myelosuppression after chemotherapy, developed a secondary pulmonary infection with Aeromonas dhakensis and was hospitalized due to fever. The patient underwent testing for inflammatory markers, chest imaging, blood culture, bronchoalveolar lavage, pleural drainage, and metagenomic next-generation sequencing of alveolar lavage fluid and pleural fluid to obtain evidence of Aeromonas dhakensis infection, and was treated with four generations of cephalosporin combined with fluoroquinolone antibiotics. The patient\'s condition significantly improved.
    UNASSIGNED: Among pulmonary infectious pathogens, Aeromonas dhakensis is relatively rare. Once an Aeromonas strain is cultured in the clinical work, pathogenic sequencing should be performed on the detected samples for early accurate diagnosis and effective anti-infection treatment.
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  • 文章类型: Journal Article
    罗氏沼虾产业受到各种气单胞菌的威胁,导致成年对虾的高死亡率。然而,关于罗氏菌感染达克气单胞菌的免疫反应的研究很少。在这项研究中,我们在组织病理学上观察了肝胰腺和g,进行了肝胰腺的比较转录组分析,并分析了血淋巴中免疫相关基因的候选基因表达,肝胰腺,和感染了达克A.组织病理学显示肝胰腺相继发炎,随后是细胞空泡化,管腔变形,最后是组织侵蚀;相继发生了部分和严重的ill炎症,最终g组织萎缩,g细丝从g弓脱离。转录组分析表明,共有77,742个基因和8664个差异表达基因(DEGs),免疫相关的DEGs主要富集在溶酶体和吞噬体途径中。此外,4个免疫相关候选基因(RhoA,CASP9,PKC,和DSCIGN)基于KEGG和PPI分析,在肝胰腺注射后6、12和24小时(hpi)进行监测,血淋巴和ill.它们的时空表达结果表明,达克曲霉菌已经激活了罗氏病菌的免疫系统。本研究可能为罗氏病菌的复杂免疫机制提供新的信息。
    The Macrobrachium rosenbergii industry is threatened by various Aeromonas, resulting in high mortality of adult prawns. However, there are few studies on the immune response of M. rosenbergii infected with Aeromonas dhakensis. In this study, we observed the hepatopancreas and gills histopathologically, performed a comparative transcriptome analysis of the hepatopancreas, and analyzed the candidate gene expression of immune-related genes in the hemolymph, hepatopancreas, and gills of M. rosenbergii that had been infected with A. dhakensis. Histopathology revealed the hepatopancreas was successively inflamed, followed by cellular vacuolation, lumen deformation, and finally tissue erosion; partial and severe inflammation of the gills occurred successively, and eventually the gill tissue atrophy and the gill filaments detached from the gill arch. Transcriptome analysis showed that a total of 77,742 unigenes and 8664 differentially expressed genes (DEGs), and the immune-related DEGs were mainly enriched in lysosome and phagosome pathways. In addition, 4 immune-related candidate genes (RhoA, CASP9, PKC, and DSCIGN) based on KEGG and PPI analysis were monitored at 6, 12, and 24h post injection (hpi) in hepatopancreas, hemolymph and gills. Their spatio-temporal expression results indicated that A. dhakensis have activated the immune system of M. rosenbergii. The present study may provide new information on the complex immune mechanism of M. rosenbergii.
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  • 文章类型: Journal Article
    基因编辑彻底改变了生物技术,但将核酸内切酶基因作为DNA递送可导致异常整合或过表达,导致脱靶效应。这里,我们开发了一种通过工程化细菌六型分泌系统(T6SS)将Cre重组酶作为蛋白质递送的机制。使用多个T6SS融合蛋白,达克气单胞菌或减毒霍乱弧菌供体菌株,和用于检测Cre重组的功能增益盒,我们证明了活性Cre直接成功递送到受体细胞中。最有效的转移是使用霍乱弧菌的截短版本的PAAR2实现的,导致相对较小(118个氨基酸)的递送标签。我们通过提供外源性效应子进一步证明了该系统的多功能性,TseC,使霍乱弧菌杀死铜绿假单胞菌.这意味着铜绿假单胞菌对霍乱弧菌的所有天然效应子具有天然抗性,并且TseC伴奏蛋白不是其活性所必需的。此外,这表明工程系统可以提高T6SS对特定病原体的功效,提出了在微生物组操作或作为下一代抗菌剂的未来应用。价格低廉,易于生产,这种蛋白质递送系统具有许多潜在的应用,从研究T6SS效应子到遗传编辑。基于蛋白质的药物的重要性,抗原,和基因编辑剂具有广泛的应用。VI型蛋白质分泌系统(T6SS)可以靶向细菌和真核细胞,并提供不同大小和功能的蛋白质。这里,我们利用T6SS成功地将Cre重组酶递送到基因编辑细菌,而不需要将外源DNA引入受体细胞。这证明了优于需要DNA转化或缀合的当前遗传编辑工具的有希望的优势。工程化的分泌标签还可以递送异源抗微生物毒素,该毒素杀死原本不敏感的病原体,铜绿假单胞菌.这些结果证明了T6SS介导的传递在包括基因组编辑在内的领域的潜力。杀死耐药病原体,研究毒素的功能.
    Genetic editing has revolutionized biotechnology, but delivery of endonuclease genes as DNA can lead to aberrant integration or overexpression, leading to off-target effects. Here, we develop a mechanism to deliver Cre recombinase as a protein by engineering the bacterial type six secretion system (T6SS). Using multiple T6SS fusion proteins, Aeromonas dhakensis or attenuated Vibrio cholerae donor strains, and a gain-of-function cassette for detecting Cre recombination, we demonstrate successful delivery of active Cre directly into recipient cells. The most efficient transfer was achieved using a truncated version of PAAR2 from V. cholerae, resulting in a relatively small (118-amino-acid) delivery tag. We further demonstrate the versatility of this system by delivering an exogenous effector, TseC, enabling V. cholerae to kill Pseudomonas aeruginosa. This implies that P. aeruginosa is naturally resistant to all native effectors of V. cholerae and that the TseC chaperone protein is not required for its activity. Moreover, it demonstrates that the engineered system can improve T6SS efficacy against specific pathogens, proposing future application in microbiome manipulation or as a next-generation antimicrobial. Inexpensive and easy to produce, this protein delivery system has many potential applications, ranging from studying T6SS effectors to genetic editing. IMPORTANCE Delivery of protein-based drugs, antigens, and gene-editing agents has broad applications. The type VI protein secretion system (T6SS) can target both bacteria and eukaryotic cells and deliver proteins of diverse size and function. Here, we harness the T6SS to successfully deliver Cre recombinase to genetically edit bacteria without requiring the introduction of exogenous DNA into the recipient cells. This demonstrates a promising advantage over current genetic editing tools that require transformation or conjugation of DNA. The engineered secretion tag can also deliver a heterologous antimicrobial toxin that kills an otherwise unsusceptible pathogen, Pseudomonas aeruginosa. These results demonstrate the potential of T6SS-mediated delivery in areas including genome editing, killing drug-resistant pathogens, and studying toxin functions.
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  • 文章类型: Journal Article
    The study aimed to elucidate the species taxonomy, clinical manifestations, virulence gene profiles and antimicrobial susceptibilities of Aeromonas strains isolated from life-threatening bacteremia in southeastern China.
    Clinical samples of Aeromonas causing bacteremia were isolated from a teaching hospital in Wenzhou from 2013 to 2018 and a retrospective cohort study was performed. Aeromonas strains were identified at species level by housekeeping gene gyrB. Virulence and drug resistance-associated genes were screened by polymerase chain reaction (PCR) and antimicrobial susceptibility testing (AST) was performed by the VITEK 2 Compact system.
    A total of 58 Aeromonas isolated from patients with bacteremia were collected during 6 years (2013-2018). 58 isolates were identified to five different species, where Aeromonas dhakensis appeared to be the predominant species (26/58), followed by Aeromonas veronii (13/58), Aeromonas caviae (10/58), Aeromonas hydrophila (7/58) and Aeromonas jandaei (2/58). 16 of 58 patients had poor prognosis. Poor prognosis was significantly associated with liver cirrhosis and inappropriate empirical antimicrobials therapy. The progression of bacteremia caused by Aeromonas was extremely fast, especially in A. dhakensis infections. Virulence genes aer, lip, hlyA, alt, ast, and act, were detected at ratios of 24.1% (14/58), 62.1% (36/58), 65.5% (38/58), 58.6% (34/58), 15.5% (9/58) and 65.5% (38/58), respectively. Antimicrobial susceptibility testing exhibited that 9 out of 58 isolates were identified as multi-drug resistant (MDR) organism. The blaTEM gene was identified in all 9 MDR isolates. blaSHV, blaAQU-1, blaMOX, blaCepH, blaCphA and aac(6\')-Ib-cr were detected in 4 isolates, 2 isolates, 1 isolate, 3 isolates, 8 isolates, and 3 isolates, respectively. The majority of Aeromonas strains maintained susceptible to 3rd generation cephalosporins, aminoglycosides, fluoroquinolones and furantoin.
    The prevalence and dangerousness of Aeromonas infections, especially A. dhakensis, are underestimated in clinic. Continuous monitoring is essential to keep track of MDR Aeromonas due to the increasing prevalence recently and a more effective measure is required to control the spread of resistance determinants.
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  • 文章类型: Case Reports
    Aeromonas dhakensis is an important ubiquitous Gram-negative and freshwater bacterium detected in different reservoirs. It can cause invasive diseases in humans. Herein, we report the first case in Mainland China of a fulminant death of a 29-year-old man as a result of a new, unexpected association between septicemic A. dhakensis and hepatitis B viral infection (HBV). Herein, the patient died from multiple organ failure 5 d postadmission after the ingestion of Snakehead Fish meal. The isolated bacterium was initially misidentified as Aeromonas hydrophila using VITEK-2, while whole-genome sequencing (WGS) revealed that the isolate is A. dhakensis. WGS revealed the occurrence of three antimicrobial genes of resistance: imiH, cphA2, and blaOXA-12; besides, major virulence factors were detected. In silico, multilocus sequence typing (MLST) showed that our A. dhakensis 17FW001 belonged to a novel sequence type (ST557). A comparative genomic analysis of our isolate with nine selected Aeromonas species was done, which elucidated the pathogenicity of our A. dhakensis. In conclusion, we reported for the first time the association between A. dhakensis and HBV in Mainland China. We revealed that septicemic A. dhakensis could result in severe adverse clinical outcomes that end up with unexpected fulminant death especially when it is accompanied with HBV and sheds light on the virulence of A. dhakensis and the high rate of its misdiagnosis that requires to urgently consider screening of all cases of A. dhakensis for HBV in the future. Besides, caution should be taken while dealing with snakeheads which act as a vector for A. dhakensis.
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