ABO

ABO
  • 文章类型: Journal Article
    背景:ABO基因的突变可能会导致ABO糖基转移酶(GT)的功能障碍,从而导致弱的ABO表型。这里,我们鉴定了两个新的弱ABO亚组等位基因,并探索了引起Ax表型的机制。
    方法:通过血清学研究和ABO基因的直接DNA测序进行ABO表型和基因分型。通过3D模型评估突变的作用,预测蛋白质结构变化,和体外表达测定。检测转染细胞上清液中的总糖基转移酶转移能力。
    结果:血清学结果显示受试者RJ23和RJ52均为Ax表型。小说中的A等位基因,根据基因分析鉴定Avar-1和Avar-2。Avar-1和Avar-2都带有重组杂合等位基因,特别是A2.05和O.01.02。这些等位基因在c.106G>T位置显示出取代,c.189C>T,c.220C>T,和c.1009A>G在他们各自的外显子。值得注意的是,这两个等位基因的交叉区域彼此不同。体外表达研究表明,GTA突变体损害了H向A抗原的转化,并且突变体通过西方螺栓不影响GTA的产生。计算机分析表明,GTA突变体可能会改变GT的局部构象和稳定性。
    结论:确定了Avar-1和Avar-2等位基因,这可能通过改变GTA的局部构象和降低GTA的稳定性而导致Ax表型。
    BACKGROUND: Mutations of ABO gene may cause the dysfunction of ABO glycosyltransferase (GT) that can result in weak ABO phenotypes. Here, we identified two novel weak ABO subgroup alleles and explored the mechanism that caused Ax phenotype.
    METHODS: The ABO phenotyping and genotyping were performed by serological studies and direct DNA sequencing of ABO gene. The role of the mutations was evaluated by 3D model, predicting protein structure changes, and in vitro expression assay. The total glycosyltransferase transfer capacity in supernatant of transfected cells was examined.
    RESULTS: The results of serological showed the subject RJ23 and RJ52 both were Ax phenotypes. The novel A alleles, Avar-1 and Avar-2 were identified according to the gene analysis. Both Avar-1 and Avar-2 harbored recombinant heterozygous alleles, specifically A2.05 and O.01.02. These alleles showcased substitutions at positions c.106G > T, c.189C > T, c.220C > T, and c.1009A > G in their respective exons. It is worth noting that the crossing-over regions of these two alleles differed from each other. In vitro expression study showed that GTA mutant impaired H to A antigen conversion, and the mutant did not affect the production of GTA though the Western bolt. In silico analysis showed that GTA mutant may change the local conformation and the stability of GT.
    CONCLUSIONS: The Avar-1 and Avar-2 alleles were identified, which could cause the Ax phenotype through changing the local conformation and reducing stability of the GTA.
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  • 文章类型: Journal Article
    肠道微生物组通过诱导基因组中的结构变异(SV)来适应新环境并利用新代谢物或膳食化合物的能力在人类健康中具有重要作用。这里,我们讨论了有关SV诱导的宿主遗传调控及其作为新治疗方法的最新数据。
    The ability of the gut microbiome to adapt to a new environment and utilize a new metabolite or dietary compound by inducing structural variations (SVs) in the genome has an important role in human health. Here, we discuss recent data on host genetic regulation of SV induction and its use as a new therapeutic approach.
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  • 文章类型: Journal Article
    据报道,组织血型ABO系统转移酶(BGAT)的蛋白质水平与心脏代谢疾病相关。但其对妊娠相关结局的影响仍不清楚。在这里,我们进行了两个样本孟德尔随机化(MR)研究,以确定BGAT蛋白水平在妊娠相关结局中的假定因果作用。顺式作用蛋白数量性状位点(pQTLs)与BGAT的蛋白水平(P<5×10-8)强烈相关,被用作代理BGAT蛋白水平的工具(N=35,559,数据来自deCODE),使用来自Fenland(N=10,708)和INTERVAL(N=3301)的另外两个pQTL数据集作为验证暴露。选择10例妊娠相关疾病和并发症作为结局。我们观察到,较高的蛋白质水平的BGAT对妊娠静脉并发症和痔疮(VH)(优势比[OR]=1.19,95%置信区间[95%CI]=1.12-1.27,共同定位概率=91%),通过使用来自Fenland和INTERVAL的pQTL进行验证。孟德尔随机化结果进一步显示了BGAT蛋白对妊娠期高血压(GH)的影响(OR=0.97,95%CI=0.96-0.99),尽管很少有共同定位的证据支持它。敏感性分析,包括顺式作用BGATpQTL的全蛋白质组孟德尔随机化,几乎没有水平多效性的证据。正确地,我们的研究优先考虑BGAT作为妊娠期静脉并发症和痔疮的推定致病蛋白.需要未来的流行病学和临床研究来调查BGAT是否可以被视为预防不良妊娠结局的药物靶标。
    Protein level of Histo-Blood Group ABO System Transferase (BGAT) has been reported to be associated with cardiometabolic diseases. But its effect on pregnancy related outcomes still remains unclear. Here we conducted a two-sample Mendelian randomization (MR) study to ascertain the putative causal roles of protein levels of BGAT in pregnancy related outcomes. Cis-acting protein quantitative trait loci (pQTLs) robustly associated with protein level of BGAT (P < 5 ×10-8) were used as instruments to proxy the BGAT protein level (N = 35,559, data from deCODE), with two additional pQTL datasets from Fenland (N = 10,708) and INTERVAL (N = 3301) used as validation exposures. Ten pregnancy related diseases and complications were selected as outcomes. We observed that a higher protein level of BGAT showed a putative causal effect on venous complications and haemorrhoids in pregnancy (VH) (odds ratio [OR]=1.19, 95% confidence interval [95% CI]=1.12-1.27, colocalization probability=91%), which was validated by using pQTLs from Fenland and INTERVAL. The Mendelian randomization results further showed effects of the BGAT protein on gestational hypertension (GH) (OR=0.97, 95% CI=0.96-0.99), despite little colocalization evidence to support it. Sensitivity analyses, including proteome-wide Mendelian randomization of the cis-acting BGAT pQTLs, showed little evidence of horizontal pleiotropy. Correctively, our study prioritised BGAT as a putative causal protein for venous complications and haemorrhoids in pregnancy. Future epidemiology and clinical studies are needed to investigate whether BGAT can be considered as a drug target to prevent adverse pregnancy outcomes.
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  • 文章类型: Journal Article
    背景:ABO糖基转移酶(GT)酶的功能障碍,这是由ABO基因的突变引起的,可导致弱ABO表型。在这项研究中,我们发现了一个新的弱ABO亚组等位基因,并研究了导致其Aweak表型的潜在机制。
    方法:通过血清学研究和ABO基因的直接DNA测序进行ABO表型和基因分型。通过3D模型评估了新的单核苷酸多态性(SNP)的作用,预测蛋白质结构变化,和体外表达测定。检测转染细胞上清液中的总糖基转移酶转移能力。
    结果:血清学结果显示受试者为Aweak表型。一个新的SNPc.424A>G(p。M142V)基于ABO*A1.02进行识别,根据基因分析,受试者的基因型为AW-var/O.01。计算机分析表明,A等位基因上的SNPc.424A>G可能通过破坏氢键而改变了局部构象,并降低了GT的稳定性。体外表达研究表明,SNPp.M142V损害了H向A抗原的转化,尽管它不影响A糖基转移酶(GTA)的产生。
    结论:鉴定出一个新的AW等位基因,SNPc.424A>G(p。M142V)可以通过破坏氢键和降低GTA的稳定性来引起Aweak表型。
    BACKGROUND: The dysfunction of the ABO glycosyltransferase (GT) enzyme, which is caused by mutations in the ABO gene, can lead to weak ABO phenotypes. In this study, we have discovered a novel weak ABO subgroup allele and investigated the underlying mechanism to causing its Aweak phenotype.
    METHODS: The ABO phenotyping and genotyping were performed by serological studies and direct DNA sequencing of ABO gene. The role of the novel single nucleotide polymorphism (SNP) was evaluated by 3D model, predicting protein structure changes, and in vitro expression assay. The total glycosyltransferase transfer capacity in supernatant of transfected cells was examined.
    RESULTS: The results of serological showed the subject was Aweak phenotype. A novel SNP c.424A > G (p. M142V) based on ABO*A1.02 was identified, and the genotype of the subject was AW-var/O.01 according to the gene analysis. In silico analysis showed that the SNP c.424A > G on the A allele may change the local conformation by damaging the hydrogen bonds and reduce the stability of GT. In vitro expression study showed that SNP p.M142V impaired H to A antigen conversion, although it did not affect the generation of A glycosyltransferase (GTA).
    CONCLUSIONS: One novel AW allele was identified and the SNP c.424A > G (p.M142V) can cause the Aweak phenotype through damaging the hydrogen bonds and reducing stability of the GTA.
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  • 文章类型: Journal Article
    目的:ABO抗原由H抗原通过ABO基因编码的糖基转移酶的活性产生。ABO基因中的变异体可产生弱ABO表型。在这项研究中,我们鉴定了一个新的ABO*BW等位基因,并研究了导致Bweak表型的潜在机制。
    方法:使用血清学和直接DNA测序方法确定样品的ABO表型和基因型。我们通过三维建模评估了新变体的影响,以预测蛋白质稳定性变化(ΔΔG)。并进行了体外表达测定。还检查了转染细胞的上清液中的总糖基转移酶转移能力。
    结果:血清学分析证实受试者的Bweak表型,和基因测序确定了一个新的变异c.761C>T(p。A254V)上的ABO*B.01等位基因,导致BW-var/O.01.02基因型。计算机模拟分析表明,B等位基因上的p.A254V变体可能会降低糖基转移酶B(GTB)的稳定性,如ΔΔG值所示。体外表达研究表明,变异体p.A254V损害了H向B抗原的转化,虽然不影响GTB的表达。
    结论:我们鉴定了一个新的BW等位基因,并证明了变体c.761C>T(p。A254V)可以通过降低GTB的稳定性来引起Bweak表型。
    OBJECTIVE: ABO antigens are produced from H antigen by the activity of glycosyltransferase enzyme encoded by the ABO gene. Variants in the ABO gene can produce a weak ABO phenotype. In this study, we identify a novel ABO*BW allele and investigate the underlying mechanism leading to the Bweak phenotype.
    METHODS: The ABO phenotype and genotype of the sample were determined using serological and direct DNA sequencing methods. We assessed the impact of the novel variant by three-dimensional modelling to predict protein stability changes (ΔΔG), and carried out an in vitro expression assay. The total glycosyltransferase transfer capacity in the supernatant of transfected cells was also examined.
    RESULTS: Serological analysis confirmed the Bweak phenotype in the subject, and gene sequencing identified a novel variant c.761C>T (p.A254V) on the ABO*B.01 allele, resulting in a BW-var/O.01.02 genotype. In silico analysis suggested that the p.A254V variant on the B allele may reduce the stability of glycosyltransferase B (GTB), as indicated by the ΔΔG values. In vitro expression studies showed that the variant p.A254V impaired H to B antigen conversion, although it did not affect the expression of GTB.
    CONCLUSIONS: We identified a novel BW allele and demonstrated that the variant c.761C>T (p.A254V) can cause the Bweak phenotype by reducing the stability of GTB.
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  • 文章类型: Journal Article
    暂无摘要。
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  • 文章类型: Journal Article
    当ABO血型出现差异时,应考虑ABO子组。血清学程序,如吸附-洗脱试验,唾液ABH抑制试验,可以采用抗A1(凝集素)盐水技术。这些血清学方法,然而,在罕见的血型很难理解。因此,确定ABO子组的可靠且具有成本效益的方法具有特殊意义。
    为此,DNA测序是获得准确结果的最可靠解决方案。由于实验室无法用传统方法确定血型,对中国人ABO基因的外显子1至75\'3\'UTR和内含子6进行了测序。
    血液分析显示在其表面上有弱的B抗原。基因测序结果揭示了一个新的B等位基因,在第425个核苷酸处,从T到C有一个新的核苷酸差异。
    结果报道了不能通过常规血清学方法证实的新的B等位基因。由于ABO血型遗传的特殊性,关于中国人群中罕见血型的发病率和分子原因的发现具有重要的治疗意义,值得将来进一步研究。
    When discrepancies in ABO blood typing emerge, ABO subgroups should be considered. Serological procedures such as the adsorption-elution test, the salivary ABH inhibition test, and the antiA1 (lectin) saline technique might be employed. These serological approaches, however in rare blood types are difficult to understand. As a result, a dependable and cost-effective approach for determining ABO subgroups is of special relevance.
    for this purpose, DNA sequencing is most reliable solution for accurate results. Exon 1 to 7 5\' 3\' UTR and intron 6 of ABO gene of a Chinese individual was sequenced because the laboratory was unable to determine the blood group by traditional method.
    The analysis of the blood showed weak B antigens on their surface. Gene sequencing results revealed a novel B allele, that has one novel identified nucleotide difference from T to C at nucleotide 425.
    The results reported novel B allele which cannot be confirmed by conventional serological methods. Owing to the peculiarity of ABO blood types of inheritance, findings on the incidence and molecular causes of rare blood groups in the Chinese population have substantial therapeutic implications and are worthy of additional investigation in the future.
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  • 文章类型: Journal Article
    最近的研究表明,哮喘可能对COVID-19有保护作用。我们旨在调查哮喘与两种COVID-19结局之间的因果关系,并探索强调这种联系的机制。
    GWAS的汇总结果用于分析,包括哮喘(88,486例和447,859例对照),COVID-19住院(6,406例COVID-19住院病例和902,088例对照),和COVID-19感染(14,134例COVID-19病例和1,284,876例对照)。进行了孟德尔随机化(MR)分析,以评估哮喘对两种COVID-19结局的因果影响。进行了跨性状荟萃分析,以分析COVID-19住院和哮喘共有的两个基因座内的遗传变异。
    哮喘与COVID-19住院风险降低(比值比(OR):0.70,95%置信区间(CI):0.70-0.99)和COVID-19感染风险降低(OR:0.83,95CI:0.51-0.95)。哮喘和COVID-19共有两个全基因组重要基因,包括9q34.2地区的ABO和12q24.13地区的OAS2。荟萃分析显示,ABO和ATXN2含有对COVID-19和哮喘均具有多效性作用的变体。
    总之,我们的结果表明,哮喘的遗传倾向与SARS-CoV-2和严重COVID-19疾病的易感性降低有关,这可能是由于持续炎症的保护作用,可能,早期对COVID-19的相关补偿反应。
    Recent studies suggest that asthma may have a protective effect on COVID-19.We aimed to investigate the causality between asthma and two COVID-19 outcomes and explore the mechanisms underlining this connection.
    Summary results of GWAS were used for the analyses, including asthma (88,486 cases and 447,859 controls), COVID-19 hospitalization (6,406 hospitalized COVID-19 cases and 902,088 controls), and COVID-19 infection (14,134 COVID-19 cases and 1,284,876 controls). The Mendelian randomization (MR) analysis was performed to evaluate the causal effects of asthma on the two COVID-19 outcomes. A cross-trait meta-analysis was conducted to analyze genetic variants within two loci shared by COVID-19 hospitalization and asthma.
    Asthma is associated with decreased risk both for COVID-19 hospitalization (odds ratio (OR): 0.70, 95% confidence interval (CI): 0.70-0.99) and for COVID-19 infection (OR: 0.83, 95%CI: 0.51-0.95). Asthma and COVID-19 share two genome-wide significant genes, including ABO at the 9q34.2 region and OAS2 at the 12q24.13 region. The meta-analysis revealed that ABO and ATXN2 contain variants with pleiotropic effects on both COVID-19 and asthma.
    In conclusion, our results suggest that genetic liability to asthma is associated with decreased susceptibility to SARS-CoV-2 and to severe COVID-19 disease, which may be due to the protective effects of ongoing inflammation and, possibly, related compensatory responses against COVID-19 in its early stage.
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  • 文章类型: Journal Article
    Genes related to human longevity have not been studied so far, and need to be investigated thoroughly. This study aims to explore the relationship among ABO gene variants, lipid levels, and longevity phenotype in individuals (≥90yrs old) without adverse outcomes. A genotype-phenotype study was performed based on 5803 longevity subjects and 7026 younger controls from the Chinese Longitudinal Healthy Longevity Survey (CLHLS). Four ABO gene variants associated with healthy longevity (rs8176719 C, rs687621 G, rs643434 A, and rs505922 C) were identified and replicated in the CLHLS GWAS data analysis and found significantly higher in longevity individuals than controls. The Bonferroni adjusted p-value and OR range were 0.013-0.020 and 1.126-1.151, respectively. According to the results of linkage disequilibrium (LD) analysis, the above four variants formed a block on the ABO gene (D\'=1, r2range = 0.585-0.995). The carriers with genotypes rs687621 GG, rs643434 AX, or rs505922 CX (prange = 2.728 x 10-107-5.940 x 10-14; ORrange = 1.004-4.354) and haplotype CGAC/XGXX (p = 2.557 x 10-27; OR = 2.255) had a substantial connection with longevity, according to the results of genetic model analysis. Following the genotype and metabolic phenotype analysis, it has been shown that the longevity individuals with rs687621 GG, rs643434 AX, and rs505922 CX had a positive association with HDL-c, LDL-c, TC, TG (prange = 2.200 x 10-5-0.036, ORrange = 1.546-1.709), and BMI normal level (prange = 2.690 x 10-4-0.026, ORrange = 1.530-1.997). Finally, two pathways involving vWF/ADAMTS13 and the inflammatory markers (sE-selectin/ICAM1) that co-regulated lipid levels by glycosylation and effects on each other were speculated. In conclusion, the association between the identified longevity-associated ABO variants and better health lipid profile was elucidated, thus the findings can help in maintaining normal lipid metabolic phenotypes in the longevity population.
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  • 文章类型: Journal Article
    ABO-incompatible (ABO-I) liver transplantation (LT) has been limited due to the increased rate of complications, including severe cellular and antibody-mediated rejection, hepatic necrosis, hepatic artery thrombosis, and biliary complications. However, several strategies for reducing preformed anti-donor ABO antibodies and B cell desensitization have improved the outcomes of ABO-I LT. As a result, ABO-I LT has become a routine procedure and is a feasible option in countries with a scarce deceased-organ donation or in cases without an available compatible organ donor. In this review, we describe past and present desensitizing protocols as well as emergent therapies for depleting B cell and anti-ABO antibodies with the objective of identifying approaches that could lead to new, refined strategies for maximizing the results of ABO-I LT.
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