尼帕病毒的蛋白质归因于其生命周期,并且对病毒引起的感染至关重要。在没有批准的疗法的情况下,这些蛋白质可以被视为药物靶标。这项研究检查了53种(53种)天然化合物在计算机上抑制尼帕病毒融合糖蛋白(NiVF)和基质蛋白(NiVM)的潜力。分子对接实验,在主成分分析(PCA)的支持下,表明在所有考虑的植物化学物质中,TribulusamideB对靶蛋白NiVF和NiVM具有最高的抑制潜力(分别为-9.21和-8.66kcalmol-1),与对照药物相比,利巴韦林(分别为-7.01和-6.52kcalmol-1)。此外,发现TribulusamideB药效,即,氢供体,接受者,芳香和疏水基团,有助于与靶蛋白的有效残留相互作用。分子动力学模拟进一步验证了对接研究的结果,并得出结论,TribulusamideB与靶蛋白形成了稳定的复合物。从MM-PBSA研究获得的数据进一步解释说,与对照药物Ribavirin相比,植物化学物质可以与NiVF(-31.26kJmol-1)和NiVM(-40.26kJmol-1)蛋白强烈结合(分别为-13.12和-13.94kJmol-1)。最后,结果表明,一种对多种蛋白质有效的常见抑制剂,可以被认为是治疗尼帕病毒感染的潜在治疗实体。
The proteins of Nipah
virus ascribe to its lifecycle and are crucial to infections caused by the
virus. In the absence of approved therapeutics, these proteins can be considered as drug targets. This study examined the potential of fifty-three (53) natural compounds to inhibit Nipah
virus fusion glycoprotein (NiV F) and matrix protein (NiV M) in silico. The molecular docking experiment, supported by the principal component analysis (PCA), showed that out of all the phytochemicals considered, Tribulusamide B had the highest inhibitory potential against the target proteins NiV F and NiV M (-9.21 and -8.66 kcal mol-1, respectively), when compared to the control drug, Ribavirin (-7.01 and -6.52 kcal mol-1, respectively). Furthermore, it was found that Tribulusamide B pharmacophores, namely, hydrogen donors, acceptors, aromatic and hydrophobic groups, contributed towards the effective residual interactions with the target proteins. The molecular dynamic simulation further validated the results of the docking studies and concluded that Tribulusamide B formed a stable complex with the target proteins. The data obtained from MM-PBSA study further explained that the phytochemical could strongly bind with NiV F (-31.26 kJ mol-1) and NiV M (-40.26 kJ mol-1) proteins in comparison with the control drug Ribavirin (-13.12 and -13.94 kJ mol-1, respectively). Finally, the results indicated that Tribulusamide B, a common inhibitor effective against multiple proteins, can be considered a potential therapeutic entity in treating the Nipah
virus infection.